View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF3288R-Insertion-13 (Length: 376)

Name: NF3288R-Insertion-13
Description: NF3288R
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF3288R-Insertion-13
NF3288R-Insertion-13
[»] chr4 (50 HSPs)
chr4 (49-376)||(438871-439199)
chr4 (12-51)||(26718410-26718449)
chr4 (12-51)||(26731038-26731077)
chr4 (9-51)||(439250-439292)
chr4 (9-51)||(624302-624344)
chr4 (9-51)||(22819688-22819730)
chr4 (49-103)||(25317951-25318005)
chr4 (9-51)||(26206967-26207009)
chr4 (9-51)||(39344970-39345012)
chr4 (9-51)||(41486133-41486175)
chr4 (8-51)||(14451431-14451474)
chr4 (12-51)||(31657688-31657727)
chr4 (12-51)||(38338912-38338951)
chr4 (12-51)||(52846217-52846256)
chr4 (9-51)||(6141768-6141810)
chr4 (9-51)||(9118854-9118896)
chr4 (9-51)||(30079885-30079927)
chr4 (9-51)||(47099061-47099103)
chr4 (9-51)||(47965778-47965820)
chr4 (9-51)||(48335593-48335635)
chr4 (49-102)||(48536430-48536483)
chr4 (11-51)||(13086063-13086103)
chr4 (48-96)||(30079977-30080025)
chr4 (49-97)||(33899217-33899265)
chr4 (49-96)||(5932050-5932097)
chr4 (49-96)||(9118756-9118803)
chr4 (49-96)||(14451525-14451572)
chr4 (12-51)||(17683266-17683305)
chr4 (12-51)||(18882965-18883004)
chr4 (12-51)||(21617225-21617264)
chr4 (12-51)||(25318055-25318094)
chr4 (12-51)||(28458367-28458406)
chr4 (12-51)||(28657431-28657470)
chr4 (12-51)||(30170010-30170049)
chr4 (49-96)||(41486035-41486082)
chr4 (49-96)||(42959404-42959451)
chr4 (12-51)||(43769753-43769792)
chr4 (49-96)||(47965869-47965916)
chr4 (49-96)||(53152213-53152260)
chr4 (49-103)||(624196-624250)
chr4 (49-95)||(23822141-23822187)
chr4 (12-49)||(37297090-37297128)
chr4 (12-49)||(40348835-40348873)
chr4 (9-51)||(46405964-46406006)
chr4 (13-49)||(36177948-36177985)
chr4 (10-51)||(51194309-51194350)
chr4 (51-96)||(55601600-55601645)
chr4 (14-50)||(7627892-7627927)
chr4 (48-96)||(31076184-31076232)
chr4 (48-96)||(54669476-54669524)
[»] chr8 (37 HSPs)
chr8 (9-51)||(34018847-34018889)
chr8 (9-51)||(7955997-7956039)
chr8 (9-51)||(33589220-33589262)
chr8 (9-51)||(36110177-36110219)
chr8 (9-51)||(41521007-41521049)
chr8 (12-51)||(9549189-9549228)
chr8 (12-51)||(16327142-16327181)
chr8 (49-108)||(36110270-36110329)
chr8 (9-51)||(1633880-1633922)
chr8 (17-51)||(7473016-7473050)
chr8 (9-51)||(11017844-11017886)
chr8 (9-51)||(11657990-11658032)
chr8 (9-51)||(16872146-16872188)
chr8 (9-51)||(30136005-30136047)
chr8 (9-51)||(37783961-37784003)
chr8 (14-51)||(6991798-6991835)
chr8 (49-110)||(32847564-32847625)
chr8 (11-51)||(5864244-5864284)
chr8 (19-51)||(31596997-31597029)
chr8 (48-96)||(39493818-39493866)
chr8 (11-51)||(45529236-45529276)
chr8 (49-96)||(1633782-1633829)
chr8 (12-51)||(5277694-5277733)
chr8 (49-96)||(16966917-16966964)
chr8 (12-51)||(18651412-18651451)
chr8 (12-51)||(30439496-30439535)
chr8 (49-96)||(32843834-32843881)
chr8 (12-51)||(34718157-34718196)
chr8 (49-96)||(40739805-40739852)
chr8 (12-51)||(41159879-41159918)
chr8 (12-51)||(42569719-42569758)
chr8 (9-51)||(16966824-16966866)
chr8 (9-51)||(35564328-35564370)
chr8 (9-51)||(40739902-40739944)
chr8 (18-51)||(23793080-23793113)
chr8 (11-44)||(32501194-32501227)
chr8 (12-44)||(6968230-6968262)
[»] chr5 (34 HSPs)
chr5 (9-51)||(8675423-8675465)
chr5 (12-51)||(32912080-32912119)
chr5 (9-51)||(21064216-21064258)
chr5 (9-51)||(43441777-43441819)
chr5 (14-51)||(34124665-34124702)
chr5 (12-51)||(189693-189732)
chr5 (12-51)||(6446508-6446547)
chr5 (12-51)||(6517754-6517793)
chr5 (12-51)||(19481172-19481211)
chr5 (12-51)||(43214049-43214088)
chr5 (9-51)||(8267810-8267852)
chr5 (9-51)||(9977158-9977200)
chr5 (9-51)||(15478697-15478739)
chr5 (9-51)||(18842311-18842353)
chr5 (9-51)||(35098995-35099037)
chr5 (49-97)||(5042380-5042428)
chr5 (12-51)||(1839335-1839374)
chr5 (12-51)||(3640187-3640226)
chr5 (12-51)||(10649477-10649516)
chr5 (49-96)||(16437456-16437503)
chr5 (12-51)||(19839976-19840015)
chr5 (12-51)||(20770173-20770212)
chr5 (12-51)||(34270369-34270408)
chr5 (12-51)||(41175696-41175735)
chr5 (9-51)||(5042287-5042329)
chr5 (9-51)||(5821602-5821644)
chr5 (12-49)||(22649653-22649691)
chr5 (9-51)||(38704187-38704229)
chr5 (48-102)||(42267476-42267530)
chr5 (48-97)||(2224922-2224971)
chr5 (48-97)||(17402813-17402862)
chr5 (14-51)||(25871436-25871473)
chr5 (48-96)||(35098897-35098945)
chr5 (48-96)||(39628920-39628968)
[»] chr2 (41 HSPs)
chr2 (9-51)||(35589377-35589419)
chr2 (12-51)||(10711766-10711805)
chr2 (9-51)||(13347805-13347847)
chr2 (12-51)||(6999058-6999097)
chr2 (49-96)||(29051547-29051594)
chr2 (9-51)||(29684602-29684644)
chr2 (9-51)||(39449306-39449348)
chr2 (54-103)||(42223837-42223886)
chr2 (11-51)||(41569386-41569426)
chr2 (49-96)||(433982-434029)
chr2 (12-51)||(6170672-6170711)
chr2 (12-51)||(9634426-9634465)
chr2 (12-51)||(14233709-14233748)
chr2 (12-51)||(18723636-18723675)
chr2 (12-51)||(23352895-23352934)
chr2 (12-51)||(25881586-25881625)
chr2 (12-51)||(28245770-28245809)
chr2 (12-51)||(34119642-34119681)
chr2 (12-51)||(36802938-36802977)
chr2 (49-104)||(41569280-41569335)
chr2 (12-51)||(42678791-42678830)
chr2 (9-51)||(433889-433931)
chr2 (17-51)||(9377503-9377537)
chr2 (9-51)||(16677711-16677753)
chr2 (49-95)||(17779514-17779560)
chr2 (9-51)||(18176979-18177021)
chr2 (49-103)||(18177072-18177126)
chr2 (17-51)||(26206894-26206928)
chr2 (21-51)||(29712029-29712059)
chr2 (9-51)||(39213760-39213802)
chr2 (17-51)||(40937054-40937088)
chr2 (12-49)||(41195625-41195663)
chr2 (14-51)||(31389591-31389628)
chr2 (14-51)||(35705538-35705575)
chr2 (48-96)||(6941070-6941118)
chr2 (51-95)||(11769023-11769067)
chr2 (48-96)||(28679447-28679495)
chr2 (9-49)||(29051645-29051685)
chr2 (48-96)||(31389678-31389726)
chr2 (48-96)||(35705624-35705672)
chr2 (12-44)||(37737975-37738007)
[»] chr7 (34 HSPs)
chr7 (49-96)||(41666814-41666861)
chr7 (10-51)||(29162966-29163007)
chr7 (12-51)||(3343320-3343359)
chr7 (12-51)||(11352964-11353003)
chr7 (12-51)||(33180700-33180739)
chr7 (12-51)||(44184549-44184588)
chr7 (9-51)||(13162958-13163000)
chr7 (9-51)||(16980336-16980378)
chr7 (9-51)||(19786069-19786111)
chr7 (9-51)||(21822589-21822631)
chr7 (9-51)||(32815207-32815249)
chr7 (9-51)||(37808754-37808796)
chr7 (9-51)||(39231718-39231760)
chr7 (9-51)||(43573533-43573575)
chr7 (53-97)||(29002742-29002786)
chr7 (48-96)||(39137283-39137331)
chr7 (11-51)||(39332026-39332066)
chr7 (12-51)||(3062372-3062411)
chr7 (49-96)||(32815300-32815347)
chr7 (12-51)||(41893957-41893996)
chr7 (12-51)||(47078241-47078280)
chr7 (13-51)||(10055622-10055660)
chr7 (17-51)||(11564940-11564974)
chr7 (49-103)||(13163051-13163105)
chr7 (9-51)||(13729765-13729807)
chr7 (9-51)||(28036783-28036825)
chr7 (9-51)||(29002647-29002689)
chr7 (9-51)||(40353303-40353345)
chr7 (17-51)||(41458643-41458677)
chr7 (51-96)||(47078144-47078189)
chr7 (12-51)||(3937111-3937151)
chr7 (12-51)||(18111601-18111641)
chr7 (48-96)||(23048292-23048340)
chr7 (23-51)||(41666912-41666940)
[»] chr6 (25 HSPs)
chr6 (9-48)||(2777309-2777348)
chr6 (9-51)||(11547519-11547561)
chr6 (9-51)||(13143372-13143414)
chr6 (11-51)||(35213551-35213591)
chr6 (12-51)||(18141291-18141330)
chr6 (12-51)||(20822858-20822897)
chr6 (9-51)||(754428-754470)
chr6 (9-51)||(2075441-2075483)
chr6 (9-51)||(3610951-3610993)
chr6 (9-51)||(4820290-4820332)
chr6 (9-51)||(34504059-34504101)
chr6 (48-97)||(2075342-2075391)
chr6 (49-97)||(30152421-30152469)
chr6 (48-103)||(3199090-3199145)
chr6 (12-51)||(5028256-5028295)
chr6 (49-96)||(5327483-5327530)
chr6 (12-51)||(6531173-6531212)
chr6 (9-51)||(30152520-30152562)
chr6 (49-103)||(34504152-34504206)
chr6 (14-51)||(26832690-26832727)
chr6 (48-93)||(27763361-27763406)
chr6 (18-51)||(32046746-32046779)
chr6 (54-102)||(2777203-2777251)
chr6 (48-96)||(11547421-11547469)
chr6 (48-96)||(22341067-22341115)
[»] chr3 (53 HSPs)
chr3 (49-96)||(11633745-11633792)
chr3 (9-51)||(10206963-10207005)
chr3 (9-51)||(24482953-24482995)
chr3 (9-51)||(37508488-37508530)
chr3 (9-51)||(44677474-44677516)
chr3 (9-51)||(46253661-46253703)
chr3 (9-51)||(49363241-49363283)
chr3 (9-51)||(50206960-50207002)
chr3 (10-51)||(33375900-33375941)
chr3 (11-51)||(39697212-39697252)
chr3 (11-51)||(43905014-43905054)
chr3 (12-51)||(8846533-8846572)
chr3 (12-51)||(46019504-46019543)
chr3 (12-51)||(55400041-55400080)
chr3 (9-51)||(11633652-11633694)
chr3 (49-95)||(29633965-29634011)
chr3 (9-51)||(32767715-32767757)
chr3 (11-51)||(8821671-8821711)
chr3 (11-51)||(26996357-26996397)
chr3 (52-104)||(30862957-30863009)
chr3 (48-96)||(51973260-51973308)
chr3 (48-96)||(54195471-54195519)
chr3 (12-51)||(1337829-1337868)
chr3 (12-51)||(3281706-3281745)
chr3 (12-47)||(3953469-3953504)
chr3 (49-96)||(10206865-10206912)
chr3 (12-51)||(16675516-16675555)
chr3 (12-51)||(24095396-24095435)
chr3 (12-51)||(24645398-24645437)
chr3 (49-96)||(26996447-26996494)
chr3 (12-51)||(34057943-34057982)
chr3 (49-96)||(36121953-36122000)
chr3 (49-96)||(39670989-39671036)
chr3 (9-51)||(39671087-39671130)
chr3 (49-96)||(43905105-43905152)
chr3 (49-96)||(44677376-44677423)
chr3 (12-51)||(46852122-46852161)
chr3 (12-51)||(49761349-49761388)
chr3 (12-51)||(52937225-52937264)
chr3 (49-96)||(55013134-55013181)
chr3 (9-51)||(390848-390890)
chr3 (12-49)||(27541494-27541532)
chr3 (9-51)||(30909068-30909110)
chr3 (49-103)||(32767808-32767862)
chr3 (21-51)||(39020149-39020179)
chr3 (12-49)||(45711431-45711469)
chr3 (9-51)||(46982893-46982935)
chr3 (17-51)||(51465904-51465938)
chr3 (14-51)||(22371235-22371272)
chr3 (53-102)||(46982789-46982838)
chr3 (53-102)||(49363137-49363186)
chr3 (51-96)||(49417708-49417753)
chr3 (12-51)||(42358628-42358668)
[»] chr1 (57 HSPs)
chr1 (12-51)||(40316934-40316973)
chr1 (9-51)||(26837491-26837533)
chr1 (9-51)||(29586032-29586074)
chr1 (9-51)||(36577402-36577444)
chr1 (49-102)||(38303574-38303627)
chr1 (11-51)||(902679-902719)
chr1 (12-51)||(10890036-10890075)
chr1 (12-51)||(13489704-13489743)
chr1 (12-51)||(15705052-15705091)
chr1 (12-51)||(19969552-19969591)
chr1 (12-51)||(32915062-32915101)
chr1 (12-51)||(50781560-50781599)
chr1 (9-51)||(1790547-1790589)
chr1 (9-51)||(3603150-3603192)
chr1 (9-51)||(8411708-8411750)
chr1 (9-51)||(9008264-9008306)
chr1 (9-51)||(20565108-20565150)
chr1 (9-51)||(21340561-21340603)
chr1 (9-51)||(35136883-35136925)
chr1 (9-51)||(44294054-44294096)
chr1 (9-51)||(46082111-46082153)
chr1 (10-51)||(34040490-34040531)
chr1 (51-96)||(51286260-51286305)
chr1 (51-95)||(47214341-47214385)
chr1 (49-96)||(902770-902817)
chr1 (12-51)||(8200117-8200156)
chr1 (12-51)||(16986980-16987019)
chr1 (12-51)||(18336188-18336227)
chr1 (49-96)||(20565010-20565057)
chr1 (49-96)||(26837584-26837631)
chr1 (12-51)||(33054078-33054117)
chr1 (12-51)||(34254341-34254380)
chr1 (49-96)||(36779161-36779208)
chr1 (12-51)||(44632570-44632609)
chr1 (12-51)||(47214250-47214289)
chr1 (12-51)||(48220134-48220173)
chr1 (12-51)||(49241495-49241534)
chr1 (12-51)||(50824783-50824822)
chr1 (12-51)||(52362524-52362563)
chr1 (12-51)||(52714891-52714930)
chr1 (9-51)||(756895-756937)
chr1 (9-51)||(3024740-3024782)
chr1 (17-51)||(21486307-21486341)
chr1 (49-103)||(33024456-33024510)
chr1 (9-51)||(33024561-33024603)
chr1 (12-49)||(48470680-48470718)
chr1 (9-51)||(50328131-50328173)
chr1 (49-95)||(51191920-51191966)
chr1 (49-94)||(756988-757033)
chr1 (48-97)||(36494582-36494631)
chr1 (48-93)||(36673627-36673672)
chr1 (10-51)||(38303678-38303719)
chr1 (14-51)||(46172397-46172434)
chr1 (14-51)||(46543432-46543469)
chr1 (9-49)||(1852943-1852983)
chr1 (12-48)||(29154822-29154858)
chr1 (11-51)||(51191829-51191869)
[»] scaffold0471 (2 HSPs)
scaffold0471 (9-51)||(46-88)
scaffold0471 (49-108)||(139-198)
[»] scaffold0321 (1 HSPs)
scaffold0321 (9-51)||(19675-19717)
[»] scaffold0204 (1 HSPs)
scaffold0204 (9-51)||(23115-23157)
[»] scaffold0532 (1 HSPs)
scaffold0532 (12-51)||(11006-11045)
[»] scaffold0221 (1 HSPs)
scaffold0221 (9-51)||(8253-8295)
[»] scaffold0449 (1 HSPs)
scaffold0449 (11-51)||(9244-9284)


Alignment Details
Target: chr4 (Bit Score: 204; Significance: 1e-111; HSPs: 50)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 204; E-Value: 1e-111
Query Start/End: Original strand, 49 - 376
Target Start/End: Complemental strand, 439199 - 438871
Alignment:
Q  49 tatggttgtcaaataaactatcacaaaattggttgttcaaataacacttatctttccaaatacgtnnnnnnnnnnnnnngagtgtatgattaccaaattt 148  Q
    ||||||||||||||||| |||||| ||||| |||||||||||||||||| ||||| |||||||||              |||||||||||||||||||||    
T  439199 tatggttgtcaaataaattatcaccaaattagttgttcaaataacacttctcttttcaaatacgtaaaaaaagtaaaaagagtgtatgattaccaaattt 439100  T
Q  149 ctaattaacatatctaggaaaacacaataatcacagtctataaatcctaattcattagacaaagatgttaaaattaaaatgccaaatattaaataagtaa 248  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||    
T  439099 ctaattaacatatctaggaaaacacaataatcacagtctataaatcctaattcatccgacaaagatgttaaaattaaaatgccaaatattaaataagtaa 439000  T
Q  249 atgagtttaaatgattaatttgttacatcaaatgatgaattgttcaaaaaatttgaaatcgatttttgaatagagcaannnnnnngtc--aactttttta 346  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||| |||||||||||||||       |||  ||||||||||    
T  438999 atgagtttaaatgattaatttgttacatcaaatggtgaattgttcaaaatatttgaaatcga-ttttgaatagagcaatttttttgtcaaaactttttta 438901  T
Q  347 cctcccaattcaacttcaatttactatagt 376  Q
    ||| |||||| |||||||||||||||||||    
T  438900 cctaccaattgaacttcaatttactatagt 438871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 12 - 51
Target Start/End: Original strand, 26718410 - 26718449
Alignment:
Q  12 acaattttctctctcatactcacattactttttactttat 51  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  26718410 acaattttctctctcatactcacattactttttactttat 26718449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 12 - 51
Target Start/End: Original strand, 26731038 - 26731077
Alignment:
Q  12 acaattttctctctcatactcacattactttttactttat 51  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  26731038 acaattttctctctcatactcacattactttttactttat 26731077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 9 - 51
Target Start/End: Complemental strand, 439292 - 439250
Alignment:
Q  9 gcaacaattttctctctcatactcacattactttttactttat 51  Q
    |||||||||||||||||||||||||||||| ||||||||||||    
T  439292 gcaacaattttctctctcatactcacattagtttttactttat 439250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 9 - 51
Target Start/End: Complemental strand, 624344 - 624302
Alignment:
Q  9 gcaacaattttctctctcatactcacattactttttactttat 51  Q
    ||||||| |||||||||||||||||||||||||||||||||||    
T  624344 gcaacaactttctctctcatactcacattactttttactttat 624302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 9 - 51
Target Start/End: Original strand, 22819688 - 22819730
Alignment:
Q  9 gcaacaattttctctctcatactcacattactttttactttat 51  Q
    ||||||| |||||||||||||||||||||||||||||||||||    
T  22819688 gcaacaactttctctctcatactcacattactttttactttat 22819730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 49 - 103
Target Start/End: Complemental strand, 25318005 - 25317951
Alignment:
Q  49 tatggttgtcaaataaactatcacaaaattggttgttcaaataacacttatcttt 103  Q
    ||||||||||||||||  |||||| ||||||||||||||||||||||| ||||||    
T  25318005 tatggttgtcaaataagttatcaccaaattggttgttcaaataacactcatcttt 25317951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 9 - 51
Target Start/End: Complemental strand, 26207009 - 26206967
Alignment:
Q  9 gcaacaattttctctctcatactcacattactttttactttat 51  Q
    ||||||||||||||||||||| |||||||||||||||||||||    
T  26207009 gcaacaattttctctctcatattcacattactttttactttat 26206967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 9 - 51
Target Start/End: Complemental strand, 39345012 - 39344970
Alignment:
Q  9 gcaacaattttctctctcatactcacattactttttactttat 51  Q
    ||||||| |||||||||||||||||||||||||||||||||||    
T  39345012 gcaacaactttctctctcatactcacattactttttactttat 39344970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 9 - 51
Target Start/End: Complemental strand, 41486175 - 41486133
Alignment:
Q  9 gcaacaattttctctctcatactcacattactttttactttat 51  Q
    ||||||| |||||||||||||||||||||||||||||||||||    
T  41486175 gcaacaactttctctctcatactcacattactttttactttat 41486133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 8 - 51
Target Start/End: Original strand, 14451431 - 14451474
Alignment:
Q  8 agcaacaattttctctctcatactcacattactttttactttat 51  Q
    |||||||| |||||||||||||||||||||| ||||||||||||    
T  14451431 agcaacaactttctctctcatactcacattagtttttactttat 14451474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 12 - 51
Target Start/End: Original strand, 31657688 - 31657727
Alignment:
Q  12 acaattttctctctcatactcacattactttttactttat 51  Q
    |||| |||||||||||||||||||||||||||||||||||    
T  31657688 acaactttctctctcatactcacattactttttactttat 31657727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 12 - 51
Target Start/End: Complemental strand, 38338951 - 38338912
Alignment:
Q  12 acaattttctctctcatactcacattactttttactttat 51  Q
    |||| |||||||||||||||||||||||||||||||||||    
T  38338951 acaactttctctctcatactcacattactttttactttat 38338912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 12 - 51
Target Start/End: Complemental strand, 52846256 - 52846217
Alignment:
Q  12 acaattttctctctcatactcacattactttttactttat 51  Q
    |||| |||||||||||||||||||||||||||||||||||    
T  52846256 acaactttctctctcatactcacattactttttactttat 52846217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 9 - 51
Target Start/End: Complemental strand, 6141810 - 6141768
Alignment:
Q  9 gcaacaattttctctctcatactcacattactttttactttat 51  Q
    ||||||| |||||||||||||||||||||||| ||||||||||    
T  6141810 gcaacaactttctctctcatactcacattactctttactttat 6141768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 9 - 51
Target Start/End: Complemental strand, 9118896 - 9118854
Alignment:
Q  9 gcaacaattttctctctcatactcacattactttttactttat 51  Q
    ||||||||||||||||||||| |||||||| ||||||||||||    
T  9118896 gcaacaattttctctctcataatcacattattttttactttat 9118854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 9 - 51
Target Start/End: Original strand, 30079885 - 30079927
Alignment:
Q  9 gcaacaattttctctctcatactcacattactttttactttat 51  Q
    ||||||| |||||||||||||||||||||| ||||||||||||    
T  30079885 gcaacaactttctctctcatactcacattattttttactttat 30079927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 9 - 51
Target Start/End: Original strand, 47099061 - 47099103
Alignment:
Q  9 gcaacaattttctctctcatactcacattactttttactttat 51  Q
    ||||||| |||||||| ||||||||||||||||||||||||||    
T  47099061 gcaacaactttctctcacatactcacattactttttactttat 47099103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 9 - 51
Target Start/End: Original strand, 47965778 - 47965820
Alignment:
Q  9 gcaacaattttctctctcatactcacattactttttactttat 51  Q
    ||||||| ||| |||||||||||||||||||||||||||||||    
T  47965778 gcaacaactttttctctcatactcacattactttttactttat 47965820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 9 - 51
Target Start/End: Original strand, 48335593 - 48335635
Alignment:
Q  9 gcaacaattttctctctcatactcacattactttttactttat 51  Q
    ||||||||||||||||||||| |||||||| ||||||||||||    
T  48335593 gcaacaattttctctctcatattcacattattttttactttat 48335635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 49 - 102
Target Start/End: Original strand, 48536430 - 48536483
Alignment:
Q  49 tatggttgtcaaataaactatcacaaaattggttgttcaaataacacttatctt 102  Q
    |||| |||||||||||| |||||| ||||| |||||||||||||||||| ||||    
T  48536430 tatgattgtcaaataaattatcaccaaattagttgttcaaataacacttctctt 48536483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 11 - 51
Target Start/End: Original strand, 13086063 - 13086103
Alignment:
Q  11 aacaattttctctctcatactcacattactttttactttat 51  Q
    ||||| ||||||||||||||||||||||||||||| |||||    
T  13086063 aacaactttctctctcatactcacattactttttattttat 13086103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 48 - 96
Target Start/End: Original strand, 30079977 - 30080025
Alignment:
Q  48 ttatggttgtcaaataaactatcacaaaattggttgttcaaataacact 96  Q
    |||||||||||||||||  | |||| |||||||||||||||||||||||    
T  30079977 ttatggttgtcaaataagttttcaccaaattggttgttcaaataacact 30080025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 49 - 97
Target Start/End: Complemental strand, 33899265 - 33899217
Alignment:
Q  49 tatggttgtcaaataaactatcacaaaattggttgttcaaataacactt 97  Q
    ||||||||||||||||  | |||| ||||||||||||||||||||||||    
T  33899265 tatggttgtcaaataagttgtcaccaaattggttgttcaaataacactt 33899217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 49 - 96
Target Start/End: Complemental strand, 5932097 - 5932050
Alignment:
Q  49 tatggttgtcaaataaactatcacaaaattggttgttcaaataacact 96  Q
    ||||||||||||||||  | |||| |||||||||||||||||||||||    
T  5932097 tatggttgtcaaataagttgtcaccaaattggttgttcaaataacact 5932050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 49 - 96
Target Start/End: Complemental strand, 9118803 - 9118756
Alignment:
Q  49 tatggttgtcaaataaactatcacaaaattggttgttcaaataacact 96  Q
    ||||||||||||||||  | |||| |||||||||||||||||||||||    
T  9118803 tatggttgtcaaataagttgtcaccaaattggttgttcaaataacact 9118756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 49 - 96
Target Start/End: Original strand, 14451525 - 14451572
Alignment:
Q  49 tatggttgtcaaataaactatcacaaaattggttgttcaaataacact 96  Q
    ||||||||||||||||  | |||| |||||||||||||||||||||||    
T  14451525 tatggttgtcaaataagttgtcaccaaattggttgttcaaataacact 14451572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 12 - 51
Target Start/End: Original strand, 17683266 - 17683305
Alignment:
Q  12 acaattttctctctcatactcacattactttttactttat 51  Q
    |||| ||||||||| |||||||||||||||||||||||||    
T  17683266 acaactttctctcttatactcacattactttttactttat 17683305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 12 - 51
Target Start/End: Complemental strand, 18883004 - 18882965
Alignment:
Q  12 acaattttctctctcatactcacattactttttactttat 51  Q
    |||| ||||||||||||||||||| |||||||||||||||    
T  18883004 acaactttctctctcatactcacaatactttttactttat 18882965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 12 - 51
Target Start/End: Original strand, 21617225 - 21617264
Alignment:
Q  12 acaattttctctctcatactcacattactttttactttat 51  Q
    |||| |||||||||||||||||||||| ||||||||||||    
T  21617225 acaactttctctctcatactcacattattttttactttat 21617264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 12 - 51
Target Start/End: Complemental strand, 25318094 - 25318055
Alignment:
Q  12 acaattttctctctcatactcacattactttttactttat 51  Q
    |||||||||||||||||||||| |||| ||||||||||||    
T  25318094 acaattttctctctcatactcatattattttttactttat 25318055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 12 - 51
Target Start/End: Complemental strand, 28458406 - 28458367
Alignment:
Q  12 acaattttctctctcatactcacattactttttactttat 51  Q
    |||| |||||||||||||||||||||| ||||||||||||    
T  28458406 acaactttctctctcatactcacattattttttactttat 28458367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 12 - 51
Target Start/End: Complemental strand, 28657470 - 28657431
Alignment:
Q  12 acaattttctctctcatactcacattactttttactttat 51  Q
    |||| |||||||||||||||||||||| ||||||||||||    
T  28657470 acaactttctctctcatactcacattattttttactttat 28657431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 12 - 51
Target Start/End: Complemental strand, 30170049 - 30170010
Alignment:
Q  12 acaattttctctctcatactcacattactttttactttat 51  Q
    |||| |||||||||||||||||||||| ||||||||||||    
T  30170049 acaactttctctctcatactcacattattttttactttat 30170010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 49 - 96
Target Start/End: Complemental strand, 41486082 - 41486035
Alignment:
Q  49 tatggttgtcaaataaactatcacaaaattggttgttcaaataacact 96  Q
    ||||||||||||||||  | |||| |||||||||||||||||||||||    
T  41486082 tatggttgtcaaataagttgtcaccaaattggttgttcaaataacact 41486035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 49 - 96
Target Start/End: Original strand, 42959404 - 42959451
Alignment:
Q  49 tatggttgtcaaataaactatcacaaaattggttgttcaaataacact 96  Q
    |||| |||||||||||  |||||| |||||||||||||||||||||||    
T  42959404 tatgattgtcaaataagttatcactaaattggttgttcaaataacact 42959451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 12 - 51
Target Start/End: Original strand, 43769753 - 43769792
Alignment:
Q  12 acaattttctctctcatactcacattactttttactttat 51  Q
    |||| |||||||||||||||||||||| ||||||||||||    
T  43769753 acaactttctctctcatactcacattattttttactttat 43769792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 49 - 96
Target Start/End: Original strand, 47965869 - 47965916
Alignment:
Q  49 tatggttgtcaaataaactatcacaaaattggttgttcaaataacact 96  Q
    ||||||||||||||||  | |||| |||||||||||||||||||||||    
T  47965869 tatggttgtcaaataagttgtcaccaaattggttgttcaaataacact 47965916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 49 - 96
Target Start/End: Complemental strand, 53152260 - 53152213
Alignment:
Q  49 tatggttgtcaaataaactatcacaaaattggttgttcaaataacact 96  Q
    ||||||||||||||||  | |||| |||||||||||||||||||||||    
T  53152260 tatggttgtcaaataagttgtcaccaaattggttgttcaaataacact 53152213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 49 - 103
Target Start/End: Complemental strand, 624250 - 624196
Alignment:
Q  49 tatggttgtcaaataaactatcacaaaattggttgttcaaataacacttatcttt 103  Q
    ||||||||||||||||  | |||| ||||| |||||||||||||||||| |||||    
T  624250 tatggttgtcaaataagttgtcaccaaattagttgttcaaataacacttctcttt 624196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 49 - 95
Target Start/End: Complemental strand, 23822187 - 23822141
Alignment:
Q  49 tatggttgtcaaataaactatcacaaaattggttgttcaaataacac 95  Q
    ||||||||||||||||  | |||| ||||||||||||||||||||||    
T  23822187 tatggttgtcaaataagttgtcaccaaattggttgttcaaataacac 23822141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 12 - 49
Target Start/End: Original strand, 37297090 - 37297128
Alignment:
Q  12 acaattttctctctcatactcacatta-ctttttacttt 49  Q
    ||||||||||||||||||||||||||| |||||||||||    
T  37297090 acaattttctctctcatactcacattatctttttacttt 37297128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 12 - 49
Target Start/End: Original strand, 40348835 - 40348873
Alignment:
Q  12 acaattttctctctcatactcacatta-ctttttacttt 49  Q
    ||||||||||||||||||||||||||| |||||||||||    
T  40348835 acaattttctctctcatactcacattatctttttacttt 40348873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 9 - 51
Target Start/End: Complemental strand, 46406006 - 46405964
Alignment:
Q  9 gcaacaattttctctctcatactcacattactttttactttat 51  Q
    ||||||| ||| |||||||||||||||||| ||||||||||||    
T  46406006 gcaacaactttttctctcatactcacattaatttttactttat 46405964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 13 - 49
Target Start/End: Original strand, 36177948 - 36177985
Alignment:
Q  13 caattttctctctcatactcacatta-ctttttacttt 49  Q
    |||||||||||||||||||||||||| |||||||||||    
T  36177948 caattttctctctcatactcacattatctttttacttt 36177985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 10 - 51
Target Start/End: Original strand, 51194309 - 51194350
Alignment:
Q  10 caacaattttctctctcatactcacattactttttactttat 51  Q
    |||||| ||||||| |||||||||||| ||||||||||||||    
T  51194309 caacaactttctctttcatactcacatcactttttactttat 51194350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 51 - 96
Target Start/End: Complemental strand, 55601645 - 55601600
Alignment:
Q  51 tggttgtcaaataaactatcacaaaattggttgttcaaataacact 96  Q
    ||||||||||||||  | ||||||||||| ||||||||||||||||    
T  55601645 tggttgtcaaataagttgtcacaaaattgattgttcaaataacact 55601600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 14 - 50
Target Start/End: Original strand, 7627892 - 7627927
Alignment:
Q  14 aattttctctctcatactcacattactttttacttta 50  Q
    ||||||||||||||||||||||||| |||||||||||    
T  7627892 aattttctctctcatactcacatta-tttttacttta 7627927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 48 - 96
Target Start/End: Original strand, 31076184 - 31076232
Alignment:
Q  48 ttatggttgtcaaataaactatcacaaaattggttgttcaaataacact 96  Q
    |||||||||||||||||  | |||| |||||||||||| ||||||||||    
T  31076184 ttatggttgtcaaataagttgtcaccaaattggttgtttaaataacact 31076232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 48 - 96
Target Start/End: Complemental strand, 54669524 - 54669476
Alignment:
Q  48 ttatggttgtcaaataaactatcacaaaattggttgttcaaataacact 96  Q
    |||||||||||||||||  | |||  |||||||||||||||||||||||    
T  54669524 ttatggttgtcaaataagttgtcatcaaattggttgttcaaataacact 54669476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 37)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 9 - 51
Target Start/End: Original strand, 34018847 - 34018889
Alignment:
Q  9 gcaacaattttctctctcatactcacattactttttactttat 51  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  34018847 gcaacaattttctctctcatactcacattactttttactttat 34018889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 9 - 51
Target Start/End: Complemental strand, 7956039 - 7955997
Alignment:
Q  9 gcaacaattttctctctcatactcacattactttttactttat 51  Q
    ||||||| |||||||||||||||||||||||||||||||||||    
T  7956039 gcaacaactttctctctcatactcacattactttttactttat 7955997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 9 - 51
Target Start/End: Complemental strand, 33589262 - 33589220
Alignment:
Q  9 gcaacaattttctctctcatactcacattactttttactttat 51  Q
    |||||||||||||||||||||||||||||| ||||||||||||    
T  33589262 gcaacaattttctctctcatactcacattattttttactttat 33589220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 9 - 51
Target Start/End: Original strand, 36110177 - 36110219
Alignment:
Q  9 gcaacaattttctctctcatactcacattactttttactttat 51  Q
    ||||||||||||||| |||||||||||||||||||||||||||    
T  36110177 gcaacaattttctctttcatactcacattactttttactttat 36110219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 9 - 51
Target Start/End: Original strand, 41521007 - 41521049
Alignment:
Q  9 gcaacaattttctctctcatactcacattactttttactttat 51  Q
    |||||||||||||||||||||||||||||| ||||||||||||    
T  41521007 gcaacaattttctctctcatactcacattattttttactttat 41521049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 12 - 51
Target Start/End: Complemental strand, 9549228 - 9549189
Alignment:
Q  12 acaattttctctctcatactcacattactttttactttat 51  Q
    ||||||||||||||||||||||||||| ||||||||||||    
T  9549228 acaattttctctctcatactcacattattttttactttat 9549189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 12 - 51
Target Start/End: Complemental strand, 16327181 - 16327142
Alignment:
Q  12 acaattttctctctcatactcacattactttttactttat 51  Q
    |||| |||||||||||||||||||||||||||||||||||    
T  16327181 acaactttctctctcatactcacattactttttactttat 16327142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 49 - 108
Target Start/End: Original strand, 36110270 - 36110329
Alignment:
Q  49 tatggttgtcaaataaactatcacaaaattggttgttcaaataacacttatctttccaaa 108  Q
    ||||||||||||||||  | |||| |||||||||||||||||||||||  ||||||||||    
T  36110270 tatggttgtcaaataagttgtcaccaaattggttgttcaaataacactcctctttccaaa 36110329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 9 - 51
Target Start/End: Complemental strand, 1633922 - 1633880
Alignment:
Q  9 gcaacaattttctctctcatactcacattactttttactttat 51  Q
    ||||||| |||||||||||||||||||||| ||||||||||||    
T  1633922 gcaacaactttctctctcatactcacattattttttactttat 1633880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 17 - 51
Target Start/End: Complemental strand, 7473050 - 7473016
Alignment:
Q  17 tttctctctcatactcacattactttttactttat 51  Q
    |||||||||||||||||||||||||||||||||||    
T  7473050 tttctctctcatactcacattactttttactttat 7473016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 9 - 51
Target Start/End: Original strand, 11017844 - 11017886
Alignment:
Q  9 gcaacaattttctctctcatactcacattactttttactttat 51  Q
    ||||||| |||||||||||||||||||||| ||||||||||||    
T  11017844 gcaacaactttctctctcatactcacattattttttactttat 11017886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 9 - 51
Target Start/End: Complemental strand, 11658032 - 11657990
Alignment:
Q  9 gcaacaattttctctctcatactcacattactttttactttat 51  Q
    ||||||| ||||||||||||||||||||||||||||| |||||    
T  11658032 gcaacaactttctctctcatactcacattactttttattttat 11657990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 9 - 51
Target Start/End: Complemental strand, 16872188 - 16872146
Alignment:
Q  9 gcaacaattttctctctcatactcacattactttttactttat 51  Q
    ||||||| ||||||| |||||||||||||||||||||||||||    
T  16872188 gcaacaactttctctatcatactcacattactttttactttat 16872146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 9 - 51
Target Start/End: Complemental strand, 30136047 - 30136005
Alignment:
Q  9 gcaacaattttctctctcatactcacattactttttactttat 51  Q
    ||||||| ||||||||||||| |||||||||||||||||||||    
T  30136047 gcaacaactttctctctcatattcacattactttttactttat 30136005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 9 - 51
Target Start/End: Complemental strand, 37784003 - 37783961
Alignment:
Q  9 gcaacaattttctctctcatactcacattactttttactttat 51  Q
    ||||||| ||||||||||||||||| |||||||||||||||||    
T  37784003 gcaacaactttctctctcatactcagattactttttactttat 37783961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 14 - 51
Target Start/End: Complemental strand, 6991835 - 6991798
Alignment:
Q  14 aattttctctctcatactcacattactttttactttat 51  Q
    ||||||||||||||||||||||||| ||||||||||||    
T  6991835 aattttctctctcatactcacattattttttactttat 6991798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 49 - 110
Target Start/End: Complemental strand, 32847625 - 32847564
Alignment:
Q  49 tatggttgtcaaataaactatcacaaaattggttgttcaaataacacttatctttccaaata 110  Q
    ||||||||||||||||  |||||| |||||| ||||||||||||||||  ||||| ||||||    
T  32847625 tatggttgtcaaataagttatcaccaaattgattgttcaaataacactcctcttttcaaata 32847564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 11 - 51
Target Start/End: Original strand, 5864244 - 5864284
Alignment:
Q  11 aacaattttctctctcatactcacattactttttactttat 51  Q
    ||||||||||||||||||| |||||||| ||||||||||||    
T  5864244 aacaattttctctctcataatcacattattttttactttat 5864284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 51
Target Start/End: Original strand, 31596997 - 31597029
Alignment:
Q  19 tctctctcatactcacattactttttactttat 51  Q
    |||||||||||||||||||||||||||||||||    
T  31596997 tctctctcatactcacattactttttactttat 31597029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 48 - 96
Target Start/End: Complemental strand, 39493866 - 39493818
Alignment:
Q  48 ttatggttgtcaaataaactatcacaaaattggttgttcaaataacact 96  Q
    ||||| |||||||||||| |||||  |||||||||||||||||||||||    
T  39493866 ttatgattgtcaaataaattatcattaaattggttgttcaaataacact 39493818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 11 - 51
Target Start/End: Complemental strand, 45529276 - 45529236
Alignment:
Q  11 aacaattttctctctcatactcacattactttttactttat 51  Q
    ||||| |||||||||||||||||||||| ||||||||||||    
T  45529276 aacaactttctctctcatactcacattattttttactttat 45529236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 49 - 96
Target Start/End: Complemental strand, 1633829 - 1633782
Alignment:
Q  49 tatggttgtcaaataaactatcacaaaattggttgttcaaataacact 96  Q
    ||||||||||||||||  | |||| |||||||||||||||||||||||    
T  1633829 tatggttgtcaaataagttgtcaccaaattggttgttcaaataacact 1633782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 12 - 51
Target Start/End: Complemental strand, 5277733 - 5277694
Alignment:
Q  12 acaattttctctctcatactcacattactttttactttat 51  Q
    ||||||||||||||||||||||||||| |||||| |||||    
T  5277733 acaattttctctctcatactcacattattttttattttat 5277694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 49 - 96
Target Start/End: Original strand, 16966917 - 16966964
Alignment:
Q  49 tatggttgtcaaataaactatcacaaaattggttgttcaaataacact 96  Q
    ||||||||||||||||  | |||| |||||||||||||||||||||||    
T  16966917 tatggttgtcaaataagttttcaccaaattggttgttcaaataacact 16966964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 12 - 51
Target Start/End: Original strand, 18651412 - 18651451
Alignment:
Q  12 acaattttctctctcatactcacattactttttactttat 51  Q
    ||||||||||||||||||||||||| | ||||||||||||    
T  18651412 acaattttctctctcatactcacatcattttttactttat 18651451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 12 - 51
Target Start/End: Complemental strand, 30439535 - 30439496
Alignment:
Q  12 acaattttctctctcatactcacattactttttactttat 51  Q
    |||| |||||||||||||||||||||| ||||||||||||    
T  30439535 acaactttctctctcatactcacattattttttactttat 30439496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 49 - 96
Target Start/End: Complemental strand, 32843881 - 32843834
Alignment:
Q  49 tatggttgtcaaataaactatcacaaaattggttgttcaaataacact 96  Q
    ||||||||||||||||  | |||| |||||||||||||||||||||||    
T  32843881 tatggttgtcaaataagttgtcaccaaattggttgttcaaataacact 32843834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 12 - 51
Target Start/End: Original strand, 34718157 - 34718196
Alignment:
Q  12 acaattttctctctcatactcacattactttttactttat 51  Q
    |||| |||||||||||||||||||||| ||||||||||||    
T  34718157 acaactttctctctcatactcacattattttttactttat 34718196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 49 - 96
Target Start/End: Complemental strand, 40739852 - 40739805
Alignment:
Q  49 tatggttgtcaaataaactatcacaaaattggttgttcaaataacact 96  Q
    ||||||| ||||||||| |||||| |||||||||||| ||||||||||    
T  40739852 tatggttatcaaataaattatcaccaaattggttgtttaaataacact 40739805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 12 - 51
Target Start/End: Complemental strand, 41159918 - 41159879
Alignment:
Q  12 acaattttctctctcatactcacattactttttactttat 51  Q
    |||| |||||||||||||||||||||| ||||||||||||    
T  41159918 acaactttctctctcatactcacattattttttactttat 41159879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 12 - 51
Target Start/End: Complemental strand, 42569758 - 42569719
Alignment:
Q  12 acaattttctctctcatactcacattactttttactttat 51  Q
    |||| ||||||||||||| |||||||||||||||||||||    
T  42569758 acaactttctctctcatattcacattactttttactttat 42569719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 9 - 51
Target Start/End: Original strand, 16966824 - 16966866
Alignment:
Q  9 gcaacaattttctctctcatactcacattactttttactttat 51  Q
    ||||||| |||||||||||||||||||||| ||| ||||||||    
T  16966824 gcaacaactttctctctcatactcacattattttctactttat 16966866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 9 - 51
Target Start/End: Original strand, 35564328 - 35564370
Alignment:
Q  9 gcaacaattttctctctcatactcacattactttttactttat 51  Q
    ||||||| ||||| |||||||||||||||| ||||||||||||    
T  35564328 gcaacaactttctatctcatactcacattattttttactttat 35564370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 9 - 51
Target Start/End: Complemental strand, 40739944 - 40739902
Alignment:
Q  9 gcaacaattttctctctcatactcacattactttttactttat 51  Q
    ||||||||||| ||||||||| |||||||| ||||||||||||    
T  40739944 gcaacaattttttctctcatattcacattattttttactttat 40739902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 51
Target Start/End: Complemental strand, 23793113 - 23793080
Alignment:
Q  18 ttctctctcatactcacattactttttactttat 51  Q
    ||||||||||||||||||||| ||||||||||||    
T  23793113 ttctctctcatactcacattattttttactttat 23793080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 11 - 44
Target Start/End: Complemental strand, 32501227 - 32501194
Alignment:
Q  11 aacaattttctctctcatactcacattacttttt 44  Q
    |||||||||||||||||||||||||||| |||||    
T  32501227 aacaattttctctctcatactcacattatttttt 32501194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 12 - 44
Target Start/End: Complemental strand, 6968262 - 6968230
Alignment:
Q  12 acaattttctctctcatactcacattacttttt 44  Q
    |||| ||||||||||||||||||||||||||||    
T  6968262 acaactttctctctcatactcacattacttttt 6968230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 34)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 9 - 51
Target Start/End: Complemental strand, 8675465 - 8675423
Alignment:
Q  9 gcaacaattttctctctcatactcacattactttttactttat 51  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  8675465 gcaacaattttctctctcatactcacattactttttactttat 8675423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 12 - 51
Target Start/End: Original strand, 32912080 - 32912119
Alignment:
Q  12 acaattttctctctcatactcacattactttttactttat 51  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  32912080 acaattttctctctcatactcacattactttttactttat 32912119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 9 - 51
Target Start/End: Complemental strand, 21064258 - 21064216
Alignment:
Q  9 gcaacaattttctctctcatactcacattactttttactttat 51  Q
    ||||||| |||||||||||||||||||||||||||||||||||    
T  21064258 gcaacaactttctctctcatactcacattactttttactttat 21064216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 9 - 51
Target Start/End: Original strand, 43441777 - 43441819
Alignment:
Q  9 gcaacaattttctctctcatactcacattactttttactttat 51  Q
    ||||||| |||||||||||||||||||||||||||||||||||    
T  43441777 gcaacaactttctctctcatactcacattactttttactttat 43441819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 14 - 51
Target Start/End: Original strand, 34124665 - 34124702
Alignment:
Q  14 aattttctctctcatactcacattactttttactttat 51  Q
    ||||||||||||||||||||||||||||||||||||||    
T  34124665 aattttctctctcatactcacattactttttactttat 34124702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 12 - 51
Target Start/End: Complemental strand, 189732 - 189693
Alignment:
Q  12 acaattttctctctcatactcacattactttttactttat 51  Q
    |||| |||||||||||||||||||||||||||||||||||    
T  189732 acaactttctctctcatactcacattactttttactttat 189693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 12 - 51
Target Start/End: Complemental strand, 6446547 - 6446508
Alignment:
Q  12 acaattttctctctcatactcacattactttttactttat 51  Q
    |||| |||||||||||||||||||||||||||||||||||    
T  6446547 acaactttctctctcatactcacattactttttactttat 6446508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 12 - 51
Target Start/End: Original strand, 6517754 - 6517793
Alignment:
Q  12 acaattttctctctcatactcacattactttttactttat 51  Q
    |||| |||||||||||||||||||||||||||||||||||    
T  6517754 acaactttctctctcatactcacattactttttactttat 6517793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 12 - 51
Target Start/End: Complemental strand, 19481211 - 19481172
Alignment:
Q  12 acaattttctctctcatactcacattactttttactttat 51  Q
    |||| |||||||||||||||||||||||||||||||||||    
T  19481211 acaactttctctctcatactcacattactttttactttat 19481172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 12 - 51
Target Start/End: Complemental strand, 43214088 - 43214049
Alignment:
Q  12 acaattttctctctcatactcacattactttttactttat 51  Q
    ||||||||||| ||||||||||||||||||||||||||||    
T  43214088 acaattttctcactcatactcacattactttttactttat 43214049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 9 - 51
Target Start/End: Complemental strand, 8267852 - 8267810
Alignment:
Q  9 gcaacaattttctctctcatactcacattactttttactttat 51  Q
    ||||||| |||||||||||||||||||||| ||||||||||||    
T  8267852 gcaacaactttctctctcatactcacattattttttactttat 8267810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 9 - 51
Target Start/End: Original strand, 9977158 - 9977200
Alignment:
Q  9 gcaacaattttctctctcatactcacattactttttactttat 51  Q
    ||||||||||||||  |||||||||||||||||||||||||||    
T  9977158 gcaacaattttctcaatcatactcacattactttttactttat 9977200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 9 - 51
Target Start/End: Original strand, 15478697 - 15478739
Alignment:
Q  9 gcaacaattttctctctcatactcacattactttttactttat 51  Q
    |||| ||||||||||||||||||||||||| ||||||||||||    
T  15478697 gcaataattttctctctcatactcacattattttttactttat 15478739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 9 - 51
Target Start/End: Complemental strand, 18842353 - 18842311
Alignment:
Q  9 gcaacaattttctctctcatactcacattactttttactttat 51  Q
    ||||||| |||||||||||||||||||||| ||||||||||||    
T  18842353 gcaacaactttctctctcatactcacattattttttactttat 18842311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 9 - 51
Target Start/End: Complemental strand, 35099037 - 35098995
Alignment:
Q  9 gcaacaattttctctctcatactcacattactttttactttat 51  Q
    ||||||| |||||||||||||||||||||| ||||||||||||    
T  35099037 gcaacaactttctctctcatactcacattattttttactttat 35098995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 49 - 97
Target Start/End: Original strand, 5042380 - 5042428
Alignment:
Q  49 tatggttgtcaaataaactatcacaaaattggttgttcaaataacactt 97  Q
    ||||||||||||||||  |||||| |||||| |||||||||||||||||    
T  5042380 tatggttgtcaaataagttatcaccaaattgattgttcaaataacactt 5042428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 12 - 51
Target Start/End: Complemental strand, 1839374 - 1839335
Alignment:
Q  12 acaattttctctctcatactcacattactttttactttat 51  Q
    |||| |||||||||||||||||||||| ||||||||||||    
T  1839374 acaactttctctctcatactcacattattttttactttat 1839335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 12 - 51
Target Start/End: Complemental strand, 3640226 - 3640187
Alignment:
Q  12 acaattttctctctcatactcacattactttttactttat 51  Q
    |||| |||||||||||||||||||||| ||||||||||||    
T  3640226 acaactttctctctcatactcacattattttttactttat 3640187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 12 - 51
Target Start/End: Original strand, 10649477 - 10649516
Alignment:
Q  12 acaattttctctctcatactcacattactttttactttat 51  Q
    |||| ||||||| |||||||||||||||||||||||||||    
T  10649477 acaactttctctttcatactcacattactttttactttat 10649516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 49 - 96
Target Start/End: Complemental strand, 16437503 - 16437456
Alignment:
Q  49 tatggttgtcaaataaactatcacaaaattggttgttcaaataacact 96  Q
    |||| |||||||||||| | |||| |||||||||||||||||||||||    
T  16437503 tatgattgtcaaataaattgtcaccaaattggttgttcaaataacact 16437456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 12 - 51
Target Start/End: Complemental strand, 19840015 - 19839976
Alignment:
Q  12 acaattttctctctcatactcacattactttttactttat 51  Q
    |||| |||||||||||||||||||||| ||||||||||||    
T  19840015 acaactttctctctcatactcacattattttttactttat 19839976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 12 - 51
Target Start/End: Original strand, 20770173 - 20770212
Alignment:
Q  12 acaattttctctctcatactcacattactttttactttat 51  Q
    |||| |||||||||||||||||||||| ||||||||||||    
T  20770173 acaactttctctctcatactcacattattttttactttat 20770212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 12 - 51
Target Start/End: Original strand, 34270369 - 34270408
Alignment:
Q  12 acaattttctctctcatactcacattactttttactttat 51  Q
    ||||||||||||||||||||| ||||| ||||||||||||    
T  34270369 acaattttctctctcatactcccattattttttactttat 34270408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 12 - 51
Target Start/End: Complemental strand, 41175735 - 41175696
Alignment:
Q  12 acaattttctctctcatactcacattactttttactttat 51  Q
    |||| |||||||||||||||||||||| ||||||||||||    
T  41175735 acaactttctctctcatactcacattattttttactttat 41175696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 9 - 51
Target Start/End: Original strand, 5042287 - 5042329
Alignment:
Q  9 gcaacaattttctctctcatactcacattactttttactttat 51  Q
    ||||||| ||| |||||||||||||||||| ||||||||||||    
T  5042287 gcaacaactttatctctcatactcacattattttttactttat 5042329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 9 - 51
Target Start/End: Complemental strand, 5821644 - 5821602
Alignment:
Q  9 gcaacaattttctctctcatactcacattactttttactttat 51  Q
    ||||||||||| ||||||||||| |||||| ||||||||||||    
T  5821644 gcaacaattttttctctcatacttacattattttttactttat 5821602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 12 - 49
Target Start/End: Complemental strand, 22649691 - 22649653
Alignment:
Q  12 acaattttctctctcatactcacatta-ctttttacttt 49  Q
    ||||||||||||||||||||||||||| |||||||||||    
T  22649691 acaattttctctctcatactcacattatctttttacttt 22649653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 9 - 51
Target Start/End: Complemental strand, 38704229 - 38704187
Alignment:
Q  9 gcaacaattttctctctcatactcacattactttttactttat 51  Q
    ||||||||||| ||| |||||||||||||| ||||||||||||    
T  38704229 gcaacaattttttctatcatactcacattattttttactttat 38704187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 48 - 102
Target Start/End: Original strand, 42267476 - 42267530
Alignment:
Q  48 ttatggttgtcaaataaactatcacaaaattggttgttcaaataacacttatctt 102  Q
    |||||||||||||||||  | |||  |||||||||||||||||||||||| ||||    
T  42267476 ttatggttgtcaaataagttgtcatcaaattggttgttcaaataacacttctctt 42267530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 48 - 97
Target Start/End: Original strand, 2224922 - 2224971
Alignment:
Q  48 ttatggttgtcaaataaactatcacaaaattggttgttcaaataacactt 97  Q
    |||||||||||||||||  | |||  ||||||||||||||||||||||||    
T  2224922 ttatggttgtcaaataagttgtcatcaaattggttgttcaaataacactt 2224971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 48 - 97
Target Start/End: Complemental strand, 17402862 - 17402813
Alignment:
Q  48 ttatggttgtcaaataaactatcacaaaattggttgttcaaataacactt 97  Q
    ||||||| |||||||||  | |||| ||||||||||||||||||||||||    
T  17402862 ttatggtagtcaaataagttgtcaccaaattggttgttcaaataacactt 17402813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 14 - 51
Target Start/End: Complemental strand, 25871473 - 25871436
Alignment:
Q  14 aattttctctctcatactcacattactttttactttat 51  Q
    ||||||||||||||| ||||||||| ||||||||||||    
T  25871473 aattttctctctcatgctcacattattttttactttat 25871436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 48 - 96
Target Start/End: Complemental strand, 35098945 - 35098897
Alignment:
Q  48 ttatggttgtcaaataaactatcacaaaattggttgttcaaataacact 96  Q
    ||||| |||||||||||  | |||| |||||||||||||||||||||||    
T  35098945 ttatgattgtcaaataagttgtcaccaaattggttgttcaaataacact 35098897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 48 - 96
Target Start/End: Original strand, 39628920 - 39628968
Alignment:
Q  48 ttatggttgtcaaataaactatcacaaaattggttgttcaaataacact 96  Q
    ||||| |||||||||||| | ||||||||||  ||||||||||||||||    
T  39628920 ttatgattgtcaaataaattgtcacaaaattatttgttcaaataacact 39628968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 41)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 9 - 51
Target Start/End: Complemental strand, 35589419 - 35589377
Alignment:
Q  9 gcaacaattttctctctcatactcacattactttttactttat 51  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  35589419 gcaacaattttctctctcatactcacattactttttactttat 35589377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 12 - 51
Target Start/End: Original strand, 10711766 - 10711805
Alignment:
Q  12 acaattttctctctcatactcacattactttttactttat 51  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  10711766 acaattttctctctcatactcacattactttttactttat 10711805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 9 - 51
Target Start/End: Complemental strand, 13347847 - 13347805
Alignment:
Q  9 gcaacaattttctctctcatactcacattactttttactttat 51  Q
    ||||||| |||||||||||||||||||||||||||||||||||    
T  13347847 gcaacaactttctctctcatactcacattactttttactttat 13347805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 12 - 51
Target Start/End: Complemental strand, 6999097 - 6999058
Alignment:
Q  12 acaattttctctctcatactcacattactttttactttat 51  Q
    |||| |||||||||||||||||||||||||||||||||||    
T  6999097 acaactttctctctcatactcacattactttttactttat 6999058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 49 - 96
Target Start/End: Complemental strand, 29051594 - 29051547
Alignment:
Q  49 tatggttgtcaaataaactatcacaaaattggttgttcaaataacact 96  Q
    ||||||||||||||||  |||||| |||||||||||||||||||||||    
T  29051594 tatggttgtcaaataagttatcaccaaattggttgttcaaataacact 29051547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 9 - 51
Target Start/End: Complemental strand, 29684644 - 29684602
Alignment:
Q  9 gcaacaattttctctctcatactcacattactttttactttat 51  Q
    ||||||| |||||||||||||||||| ||||||||||||||||    
T  29684644 gcaacaactttctctctcatactcaccttactttttactttat 29684602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 9 - 51
Target Start/End: Original strand, 39449306 - 39449348
Alignment:
Q  9 gcaacaattttctctctcatactcacattactttttactttat 51  Q
    ||||||| ||||||||||||||||| |||||||||||||||||    
T  39449306 gcaacaactttctctctcatactcagattactttttactttat 39449348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 54 - 103
Target Start/End: Complemental strand, 42223886 - 42223837
Alignment:
Q  54 ttgtcaaataaactatcacaaaattggttgttcaaataacacttatcttt 103  Q
    |||| ||||||| |||||| |||||||||||||||||||||||| |||||    
T  42223886 ttgttaaataaattatcaccaaattggttgttcaaataacacttctcttt 42223837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 11 - 51
Target Start/End: Complemental strand, 41569426 - 41569386
Alignment:
Q  11 aacaattttctctctcatactcacattactttttactttat 51  Q
    ||||| |||||||||||||||||| ||||||||||||||||    
T  41569426 aacaactttctctctcatactcacgttactttttactttat 41569386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 49 - 96
Target Start/End: Original strand, 433982 - 434029
Alignment:
Q  49 tatggttgtcaaataaactatcacaaaattggttgttcaaataacact 96  Q
    ||||||||||||||||  | ||||||||||| ||||||||||||||||    
T  433982 tatggttgtcaaataagttgtcacaaaattgattgttcaaataacact 434029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 12 - 51
Target Start/End: Original strand, 6170672 - 6170711
Alignment:
Q  12 acaattttctctctcatactcacattactttttactttat 51  Q
    |||| |||||||||||||||||| ||||||||||||||||    
T  6170672 acaactttctctctcatactcacgttactttttactttat 6170711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 12 - 51
Target Start/End: Complemental strand, 9634465 - 9634426
Alignment:
Q  12 acaattttctctctcatactcacattactttttactttat 51  Q
    |||| ||| |||||||||||||||||||||||||||||||    
T  9634465 acaactttttctctcatactcacattactttttactttat 9634426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 12 - 51
Target Start/End: Complemental strand, 14233748 - 14233709
Alignment:
Q  12 acaattttctctctcatactcacattactttttactttat 51  Q
    |||| ||||||||||||||||| |||||||||||||||||    
T  14233748 acaaatttctctctcatactcatattactttttactttat 14233709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 12 - 51
Target Start/End: Original strand, 18723636 - 18723675
Alignment:
Q  12 acaattttctctctcatactcacattactttttactttat 51  Q
    |||| |||||||||||||||||||||| ||||||||||||    
T  18723636 acaactttctctctcatactcacattattttttactttat 18723675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 12 - 51
Target Start/End: Complemental strand, 23352934 - 23352895
Alignment:
Q  12 acaattttctctctcatactcacattactttttactttat 51  Q
    |||| |||||||||||||||||||||| ||||||||||||    
T  23352934 acaactttctctctcatactcacattattttttactttat 23352895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 12 - 51
Target Start/End: Original strand, 25881586 - 25881625
Alignment:
Q  12 acaattttctctctcatactcacattactttttactttat 51  Q
    |||| |||||||||||||||||||||| ||||||||||||    
T  25881586 acaactttctctctcatactcacattattttttactttat 25881625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 12 - 51
Target Start/End: Original strand, 28245770 - 28245809
Alignment:
Q  12 acaattttctctctcatactcacattactttttactttat 51  Q
    |||| |||||||||||||||||||||| ||||||||||||    
T  28245770 acaactttctctctcatactcacattattttttactttat 28245809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 12 - 51
Target Start/End: Complemental strand, 34119681 - 34119642
Alignment:
Q  12 acaattttctctctcatactcacattactttttactttat 51  Q
    |||| |||||||||||||||||||||| ||||||||||||    
T  34119681 acaactttctctctcatactcacattattttttactttat 34119642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 12 - 51
Target Start/End: Original strand, 36802938 - 36802977
Alignment:
Q  12 acaattttctctctcatactcacattactttttactttat 51  Q
    |||| |||||||||||||||||||||| ||||||||||||    
T  36802938 acaactttctctctcatactcacattattttttactttat 36802977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 49 - 104
Target Start/End: Complemental strand, 41569335 - 41569280
Alignment:
Q  49 tatggttgtcaaataaactatcacaaaattggttgttcaaataacacttatctttc 104  Q
    ||||||||||||||||  |||||  ||||||||||||||||||| ||| |||||||    
T  41569335 tatggttgtcaaataagttatcatcaaattggttgttcaaataatactcatctttc 41569280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 12 - 51
Target Start/End: Original strand, 42678791 - 42678830
Alignment:
Q  12 acaattttctctctcatactcacattactttttactttat 51  Q
    |||| |||||||||||||||||||||| ||||||||||||    
T  42678791 acaactttctctctcatactcacattattttttactttat 42678830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 9 - 51
Target Start/End: Original strand, 433889 - 433931
Alignment:
Q  9 gcaacaattttctctctcatactcacattactttttactttat 51  Q
    ||||||| |||||||||||||||||||| | ||||||||||||    
T  433889 gcaacaactttctctctcatactcacatcattttttactttat 433931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 17 - 51
Target Start/End: Original strand, 9377503 - 9377537
Alignment:
Q  17 tttctctctcatactcacattactttttactttat 51  Q
    ||||||||||||| |||||||||||||||||||||    
T  9377503 tttctctctcatattcacattactttttactttat 9377537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 9 - 51
Target Start/End: Original strand, 16677711 - 16677753
Alignment:
Q  9 gcaacaattttctctctcatactcacattactttttactttat 51  Q
    ||||||||||||||| | ||| |||||||||||||||||||||    
T  16677711 gcaacaattttctcttttatattcacattactttttactttat 16677753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 49 - 95
Target Start/End: Original strand, 17779514 - 17779560
Alignment:
Q  49 tatggttgtcaaataaactatcacaaaattggttgttcaaataacac 95  Q
    ||||||||||||||||  | |||| ||||||||||||||||||||||    
T  17779514 tatggttgtcaaataagttgtcaccaaattggttgttcaaataacac 17779560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 9 - 51
Target Start/End: Original strand, 18176979 - 18177021
Alignment:
Q  9 gcaacaattttctctctcatactcacattactttttactttat 51  Q
    ||||||| |||||||||||||||||||||| ||||| ||||||    
T  18176979 gcaacaactttctctctcatactcacattatttttttctttat 18177021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 49 - 103
Target Start/End: Original strand, 18177072 - 18177126
Alignment:
Q  49 tatggttgtcaaataaactatcacaaaattggttgttcaaataacacttatcttt 103  Q
    ||||||||||||||||  | |||| |||||| |||||||||||||||| ||||||    
T  18177072 tatggttgtcaaataagttgtcaccaaattgattgttcaaataacactcatcttt 18177126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 17 - 51
Target Start/End: Original strand, 26206894 - 26206928
Alignment:
Q  17 tttctctctcatactcacattactttttactttat 51  Q
    |||||||||||||||||||||| ||||||||||||    
T  26206894 tttctctctcatactcacattattttttactttat 26206928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 21 - 51
Target Start/End: Original strand, 29712029 - 29712059
Alignment:
Q  21 tctctcatactcacattactttttactttat 51  Q
    |||||||||||||||||||||||||||||||    
T  29712029 tctctcatactcacattactttttactttat 29712059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 9 - 51
Target Start/End: Complemental strand, 39213802 - 39213760
Alignment:
Q  9 gcaacaattttctctctcatactcacattactttttactttat 51  Q
    ||||||| ||| |||||||||||||||||| ||||||||||||    
T  39213802 gcaacaactttatctctcatactcacattattttttactttat 39213760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 17 - 51
Target Start/End: Complemental strand, 40937088 - 40937054
Alignment:
Q  17 tttctctctcatactcacattactttttactttat 51  Q
    |||||||||||||||||||||| ||||||||||||    
T  40937088 tttctctctcatactcacattattttttactttat 40937054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 12 - 49
Target Start/End: Original strand, 41195625 - 41195663
Alignment:
Q  12 acaattttctctctcatactcacatta-ctttttacttt 49  Q
    ||||||||||||||||||||||||||| |||||||||||    
T  41195625 acaattttctctctcatactcacattacctttttacttt 41195663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 14 - 51
Target Start/End: Original strand, 31389591 - 31389628
Alignment:
Q  14 aattttctctctcatactcacattactttttactttat 51  Q
    ||||||||||||||||||||||||| |||| |||||||    
T  31389591 aattttctctctcatactcacattatttttaactttat 31389628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 14 - 51
Target Start/End: Original strand, 35705538 - 35705575
Alignment:
Q  14 aattttctctctcatactcacattactttttactttat 51  Q
    |||||||||||||||||||||||||  |||||||||||    
T  35705538 aattttctctctcatactcacattatattttactttat 35705575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 48 - 96
Target Start/End: Original strand, 6941070 - 6941118
Alignment:
Q  48 ttatggttgtcaaataaactatcacaaaattggttgttcaaataacact 96  Q
    ||||| |||||||||||  |||||  |||||||||||||||||||||||    
T  6941070 ttatgattgtcaaataagttatcatcaaattggttgttcaaataacact 6941118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 51 - 95
Target Start/End: Complemental strand, 11769067 - 11769023
Alignment:
Q  51 tggttgtcaaataaactatcacaaaattggttgttcaaataacac 95  Q
    |||||||||||| || |||||  ||||||||||||||||||||||    
T  11769067 tggttgtcaaatcaattatcatcaaattggttgttcaaataacac 11769023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 48 - 96
Target Start/End: Original strand, 28679447 - 28679495
Alignment:
Q  48 ttatggttgtcaaataaactatcacaaaattggttgttcaaataacact 96  Q
    |||||||||||||||||  | | || |||||||||||||||||||||||    
T  28679447 ttatggttgtcaaataagttgtgaccaaattggttgttcaaataacact 28679495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 9 - 49
Target Start/End: Complemental strand, 29051685 - 29051645
Alignment:
Q  9 gcaacaattttctctctcatactcacattactttttacttt 49  Q
    ||||||||||||||| ||||||| |||||| ||||||||||    
T  29051685 gcaacaattttctctttcatacttacattattttttacttt 29051645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 48 - 96
Target Start/End: Original strand, 31389678 - 31389726
Alignment:
Q  48 ttatggttgtcaaataaactatcacaaaattggttgttcaaataacact 96  Q
    |||||||||||||||||  | |||  |||||||||||||||||||||||    
T  31389678 ttatggttgtcaaataagttgtcatcaaattggttgttcaaataacact 31389726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 48 - 96
Target Start/End: Original strand, 35705624 - 35705672
Alignment:
Q  48 ttatggttgtcaaataaactatcacaaaattggttgttcaaataacact 96  Q
    |||||||||| ||||||| | |||| |||||| ||||||||||||||||    
T  35705624 ttatggttgttaaataaattgtcaccaaattgattgttcaaataacact 35705672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 12 - 44
Target Start/End: Complemental strand, 37738007 - 37737975
Alignment:
Q  12 acaattttctctctcatactcacattacttttt 44  Q
    |||| ||||||||||||||||||||||||||||    
T  37738007 acaactttctctctcatactcacattacttttt 37737975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 34)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 49 - 96
Target Start/End: Complemental strand, 41666861 - 41666814
Alignment:
Q  49 tatggttgtcaaataaactatcacaaaattggttgttcaaataacact 96  Q
    ||||||||||||||||| |||||| |||||||||||||||||||||||    
T  41666861 tatggttgtcaaataaattatcaccaaattggttgttcaaataacact 41666814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 10 - 51
Target Start/End: Complemental strand, 29163007 - 29162966
Alignment:
Q  10 caacaattttctctctcatactcacattactttttactttat 51  Q
    |||||| |||||||||||||||||||||||||||||||||||    
T  29163007 caacaactttctctctcatactcacattactttttactttat 29162966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 12 - 51
Target Start/End: Complemental strand, 3343359 - 3343320
Alignment:
Q  12 acaattttctctctcatactcacattactttttactttat 51  Q
    |||||||||||||||||| |||||||||||||||||||||    
T  3343359 acaattttctctctcatattcacattactttttactttat 3343320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 12 - 51
Target Start/End: Complemental strand, 11353003 - 11352964
Alignment:
Q  12 acaattttctctctcatactcacattactttttactttat 51  Q
    |||| |||||||||||||||||||||||||||||||||||    
T  11353003 acaactttctctctcatactcacattactttttactttat 11352964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 12 - 51
Target Start/End: Complemental strand, 33180739 - 33180700
Alignment:
Q  12 acaattttctctctcatactcacattactttttactttat 51  Q
    ||||||||||||||||||||||||||| ||||||||||||    
T  33180739 acaattttctctctcatactcacattattttttactttat 33180700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 12 - 51
Target Start/End: Complemental strand, 44184588 - 44184549
Alignment:
Q  12 acaattttctctctcatactcacattactttttactttat 51  Q
    |||| |||||||||||||||||||||||||||||||||||    
T  44184588 acaactttctctctcatactcacattactttttactttat 44184549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 9 - 51
Target Start/End: Original strand, 13162958 - 13163000
Alignment:
Q  9 gcaacaattttctctctcatactcacattactttttactttat 51  Q
    ||||||| ||||||||||||||||| |||||||||||||||||    
T  13162958 gcaacaactttctctctcatactcatattactttttactttat 13163000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 9 - 51
Target Start/End: Original strand, 16980336 - 16980378
Alignment:
Q  9 gcaacaattttctctctcatactcacattactttttactttat 51  Q
    ||||||| ||||||||| |||||||||||||||||||||||||    
T  16980336 gcaacaactttctctcttatactcacattactttttactttat 16980378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 9 - 51
Target Start/End: Complemental strand, 19786111 - 19786069
Alignment:
Q  9 gcaacaattttctctctcatactcacattactttttactttat 51  Q
    ||||||| |||||||| ||||||||||||||||||||||||||    
T  19786111 gcaacaactttctctcacatactcacattactttttactttat 19786069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 9 - 51
Target Start/End: Complemental strand, 21822631 - 21822589
Alignment:
Q  9 gcaacaattttctctctcatactcacattactttttactttat 51  Q
    |||||||| ||||||||||||||| ||||||||||||||||||    
T  21822631 gcaacaatgttctctctcatactcgcattactttttactttat 21822589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 9 - 51
Target Start/End: Original strand, 32815207 - 32815249
Alignment:
Q  9 gcaacaattttctctctcatactcacattactttttactttat 51  Q
    ||||||||||| |||||||||||||||||| ||||||||||||    
T  32815207 gcaacaattttttctctcatactcacattattttttactttat 32815249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 9 - 51
Target Start/End: Complemental strand, 37808796 - 37808754
Alignment:
Q  9 gcaacaattttctctctcatactcacattactttttactttat 51  Q
    ||||||||||||||||||||||| |||||| ||||||||||||    
T  37808796 gcaacaattttctctctcatacttacattattttttactttat 37808754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 9 - 51
Target Start/End: Complemental strand, 39231760 - 39231718
Alignment:
Q  9 gcaacaattttctctctcatactcacattactttttactttat 51  Q
    ||||||| |||||||||||||||||||||| ||||||||||||    
T  39231760 gcaacaactttctctctcatactcacattattttttactttat 39231718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 9 - 51
Target Start/End: Complemental strand, 43573575 - 43573533
Alignment:
Q  9 gcaacaattttctctctcatactcacattactttttactttat 51  Q
    ||||||| ||||||||||||| |||||||||||||||||||||    
T  43573575 gcaacaactttctctctcatattcacattactttttactttat 43573533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 53 - 97
Target Start/End: Original strand, 29002742 - 29002786
Alignment:
Q  53 gttgtcaaataaactatcacaaaattggttgttcaaataacactt 97  Q
    |||||||||||| || |||| ||||||||||||||||||||||||    
T  29002742 gttgtcaaataagctgtcaccaaattggttgttcaaataacactt 29002786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 48 - 96
Target Start/End: Original strand, 39137283 - 39137331
Alignment:
Q  48 ttatggttgtcaaataaactatcacaaaattggttgttcaaataacact 96  Q
    |||||||||||||||||  |||||  |||||||||||||||||||||||    
T  39137283 ttatggttgtcaaataagttatcatcaaattggttgttcaaataacact 39137331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 11 - 51
Target Start/End: Original strand, 39332026 - 39332066
Alignment:
Q  11 aacaattttctctctcatactcacattactttttactttat 51  Q
    ||||| ||||||||| |||||||||||||||||||||||||    
T  39332026 aacaactttctctcttatactcacattactttttactttat 39332066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 12 - 51
Target Start/End: Original strand, 3062372 - 3062411
Alignment:
Q  12 acaattttctctctcatactcacattactttttactttat 51  Q
    |||| ||||||||| |||||||||||||||||||||||||    
T  3062372 acaactttctctcttatactcacattactttttactttat 3062411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 49 - 96
Target Start/End: Original strand, 32815300 - 32815347
Alignment:
Q  49 tatggttgtcaaataaactatcacaaaattggttgttcaaataacact 96  Q
    ||||||||||||||||  | |||| |||||||||||||||||||||||    
T  32815300 tatggttgtcaaataagttgtcaccaaattggttgttcaaataacact 32815347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 12 - 51
Target Start/End: Original strand, 41893957 - 41893996
Alignment:
Q  12 acaattttctctctcatactcacattactttttactttat 51  Q
    |||| ||||||| |||||||||||||||||||||||||||    
T  41893957 acaactttctctttcatactcacattactttttactttat 41893996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 12 - 51
Target Start/End: Complemental strand, 47078280 - 47078241
Alignment:
Q  12 acaattttctctctcatactcacattactttttactttat 51  Q
    |||| |||||||||||||||||||||| ||||||||||||    
T  47078280 acaactttctctctcatactcacattattttttactttat 47078241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 13 - 51
Target Start/End: Complemental strand, 10055660 - 10055622
Alignment:
Q  13 caattttctctctcatactcacattactttttactttat 51  Q
    ||||||||| |||||||||||||||| ||||||||||||    
T  10055660 caattttctttctcatactcacattattttttactttat 10055622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 17 - 51
Target Start/End: Original strand, 11564940 - 11564974
Alignment:
Q  17 tttctctctcatactcacattactttttactttat 51  Q
    |||||||||||||||||||||| ||||||||||||    
T  11564940 tttctctctcatactcacattattttttactttat 11564974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 49 - 103
Target Start/End: Original strand, 13163051 - 13163105
Alignment:
Q  49 tatggttgtcaaataaactatcacaaaattggttgttcaaataacacttatcttt 103  Q
    ||||||||||||||||  | |||| |||||| |||||||||||||||| ||||||    
T  13163051 tatggttgtcaaataagttgtcaccaaattgattgttcaaataacactcatcttt 13163105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 9 - 51
Target Start/End: Original strand, 13729765 - 13729807
Alignment:
Q  9 gcaacaattttctctctcatactcacattactttttactttat 51  Q
    ||||||| ||||| |||||||||||||||| ||||||||||||    
T  13729765 gcaacaactttctttctcatactcacattattttttactttat 13729807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 9 - 51
Target Start/End: Original strand, 28036783 - 28036825
Alignment:
Q  9 gcaacaattttctctctcatactcacattactttttactttat 51  Q
    ||||||| ||||||||| |||||||||||| ||||||||||||    
T  28036783 gcaacaactttctctcttatactcacattattttttactttat 28036825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 9 - 51
Target Start/End: Original strand, 29002647 - 29002689
Alignment:
Q  9 gcaacaattttctctctcatactcacattactttttactttat 51  Q
    ||||||| |||||||||| || |||||||||||||||||||||    
T  29002647 gcaacaactttctctctcgtaatcacattactttttactttat 29002689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 9 - 51
Target Start/End: Original strand, 40353303 - 40353345
Alignment:
Q  9 gcaacaattttctctctcatactcacattactttttactttat 51  Q
    ||||||| |||||||||||||||||||||| |||||| |||||    
T  40353303 gcaacaactttctctctcatactcacattattttttattttat 40353345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 17 - 51
Target Start/End: Original strand, 41458643 - 41458677
Alignment:
Q  17 tttctctctcatactcacattactttttactttat 51  Q
    |||||||||||||||||||||| ||||||||||||    
T  41458643 tttctctctcatactcacattattttttactttat 41458677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 51 - 96
Target Start/End: Complemental strand, 47078189 - 47078144
Alignment:
Q  51 tggttgtcaaataaactatcacaaaattggttgttcaaataacact 96  Q
    ||||||||||||||  | | ||||||||||||||||||||||||||    
T  47078189 tggttgtcaaataagttgttacaaaattggttgttcaaataacact 47078144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 12 - 51
Target Start/End: Complemental strand, 3937151 - 3937111
Alignment:
Q  12 acaattttctctctcatactcacatta-ctttttactttat 51  Q
    |||| |||||||||||||||||||||| |||||||||||||    
T  3937151 acaactttctctctcatactcacattatctttttactttat 3937111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 12 - 51
Target Start/End: Complemental strand, 18111641 - 18111601
Alignment:
Q  12 acaattttctctctcatactcacatta-ctttttactttat 51  Q
    |||||||||||||||||||||||||||  ||||||||||||    
T  18111641 acaattttctctctcatactcacattatatttttactttat 18111601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 48 - 96
Target Start/End: Complemental strand, 23048340 - 23048292
Alignment:
Q  48 ttatggttgtcaaataaactatcacaaaattggttgttcaaataacact 96  Q
    |||||||||| ||||||  | |||| |||||||||||||||||||||||    
T  23048340 ttatggttgtaaaataagttgtcaccaaattggttgttcaaataacact 23048292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 23 - 51
Target Start/End: Complemental strand, 41666940 - 41666912
Alignment:
Q  23 tctcatactcacattactttttactttat 51  Q
    |||||||||||||||||||||||||||||    
T  41666940 tctcatactcacattactttttactttat 41666912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 25)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 9 - 48
Target Start/End: Complemental strand, 2777348 - 2777309
Alignment:
Q  9 gcaacaattttctctctcatactcacattactttttactt 48  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  2777348 gcaacaattttctctctcatactcacattactttttactt 2777309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 9 - 51
Target Start/End: Complemental strand, 11547561 - 11547519
Alignment:
Q  9 gcaacaattttctctctcatactcacattactttttactttat 51  Q
    |||||||||||||||||||||||||||||| ||||||||||||    
T  11547561 gcaacaattttctctctcatactcacattattttttactttat 11547519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 9 - 51
Target Start/End: Complemental strand, 13143414 - 13143372
Alignment:
Q  9 gcaacaattttctctctcatactcacattactttttactttat 51  Q
    ||||||| |||||||||||||||||||||||||||||||||||    
T  13143414 gcaacaactttctctctcatactcacattactttttactttat 13143372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 11 - 51
Target Start/End: Complemental strand, 35213591 - 35213551
Alignment:
Q  11 aacaattttctctctcatactcacattactttttactttat 51  Q
    ||||| |||||||||||||||||||||||||||||||||||    
T  35213591 aacaactttctctctcatactcacattactttttactttat 35213551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 12 - 51
Target Start/End: Complemental strand, 18141330 - 18141291
Alignment:
Q  12 acaattttctctctcatactcacattactttttactttat 51  Q
    |||| |||||||||||||||||||||||||||||||||||    
T  18141330 acaactttctctctcatactcacattactttttactttat 18141291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 12 - 51
Target Start/End: Complemental strand, 20822897 - 20822858
Alignment:
Q  12 acaattttctctctcatactcacattactttttactttat 51  Q
    |||| |||||||||||||||||||||||||||||||||||    
T  20822897 acaactttctctctcatactcacattactttttactttat 20822858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 9 - 51
Target Start/End: Complemental strand, 754470 - 754428
Alignment:
Q  9 gcaacaattttctctctcatactcacattactttttactttat 51  Q
    ||||||| ||| |||||||||||||||||||||||||||||||    
T  754470 gcaacaactttttctctcatactcacattactttttactttat 754428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 9 - 51
Target Start/End: Complemental strand, 2075483 - 2075441
Alignment:
Q  9 gcaacaattttctctctcatactcacattactttttactttat 51  Q
    ||||||| |||||||||||||||||||||| ||||||||||||    
T  2075483 gcaacaactttctctctcatactcacattattttttactttat 2075441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 9 - 51
Target Start/End: Complemental strand, 3610993 - 3610951
Alignment:
Q  9 gcaacaattttctctctcatactcacattactttttactttat 51  Q
    ||||||| ||| |||||||||||||||||||||||||||||||    
T  3610993 gcaacaactttttctctcatactcacattactttttactttat 3610951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 9 - 51
Target Start/End: Original strand, 4820290 - 4820332
Alignment:
Q  9 gcaacaattttctctctcatactcacattactttttactttat 51  Q
    ||||||| |||||||||||||||||||||| ||||||||||||    
T  4820290 gcaacaactttctctctcatactcacattattttttactttat 4820332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 9 - 51
Target Start/End: Original strand, 34504059 - 34504101
Alignment:
Q  9 gcaacaattttctctctcatactcacattactttttactttat 51  Q
    ||||||| ||||||||||||||||||||||||||| |||||||    
T  34504059 gcaacaactttctctctcatactcacattacttttcactttat 34504101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 48 - 97
Target Start/End: Complemental strand, 2075391 - 2075342
Alignment:
Q  48 ttatggttgtcaaataaactatcacaaaattggttgttcaaataacactt 97  Q
    |||||||||||||||||  | |||| ||||||||||||||||||||||||    
T  2075391 ttatggttgtcaaataagttgtcaccaaattggttgttcaaataacactt 2075342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 49 - 97
Target Start/End: Complemental strand, 30152469 - 30152421
Alignment:
Q  49 tatggttgtcaaataaactatcacaaaattggttgttcaaataacactt 97  Q
    ||||||||||||||||  |||||| |||||| |||||||||||||||||    
T  30152469 tatggttgtcaaataagttatcaccaaattgattgttcaaataacactt 30152421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 48 - 103
Target Start/End: Original strand, 3199090 - 3199145
Alignment:
Q  48 ttatggttgtcaaataaactatcacaaaattggttgttcaaataacacttatcttt 103  Q
    ||||| |||||||||||| |||||  ||||| ||||||||||||||||| ||||||    
T  3199090 ttatgattgtcaaataaattatcatcaaattagttgttcaaataacactcatcttt 3199145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 12 - 51
Target Start/End: Complemental strand, 5028295 - 5028256
Alignment:
Q  12 acaattttctctctcatactcacattactttttactttat 51  Q
    |||| ||||||||| |||||||||||||||||||||||||    
T  5028295 acaactttctctcttatactcacattactttttactttat 5028256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 49 - 96
Target Start/End: Complemental strand, 5327530 - 5327483
Alignment:
Q  49 tatggttgtcaaataaactatcacaaaattggttgttcaaataacact 96  Q
    ||||||||||||||||  | |||| |||||||||||||||||||||||    
T  5327530 tatggttgtcaaataagttgtcaccaaattggttgttcaaataacact 5327483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 12 - 51
Target Start/End: Complemental strand, 6531212 - 6531173
Alignment:
Q  12 acaattttctctctcatactcacattactttttactttat 51  Q
    |||| |||||||||||||||||||||| ||||||||||||    
T  6531212 acaactttctctctcatactcacattattttttactttat 6531173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 9 - 51
Target Start/End: Complemental strand, 30152562 - 30152520
Alignment:
Q  9 gcaacaattttctctctcatactcacattactttttactttat 51  Q
    ||||||| |||||||||||||||||||| | ||||||||||||    
T  30152562 gcaacaactttctctctcatactcacataattttttactttat 30152520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 49 - 103
Target Start/End: Original strand, 34504152 - 34504206
Alignment:
Q  49 tatggttgtcaaataaactatcacaaaattggttgttcaaataacacttatcttt 103  Q
    |||| |||||||||||  | |||| ||||||||||||||||||||||| ||||||    
T  34504152 tatgattgtcaaataagttgtcaccaaattggttgttcaaataacactcatcttt 34504206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 14 - 51
Target Start/End: Original strand, 26832690 - 26832727
Alignment:
Q  14 aattttctctctcatactcacattactttttactttat 51  Q
    ||||||||||||||||||||||| | ||||||||||||    
T  26832690 aattttctctctcatactcacatcattttttactttat 26832727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 48 - 93
Target Start/End: Complemental strand, 27763406 - 27763361
Alignment:
Q  48 ttatggttgtcaaataaactatcacaaaattggttgttcaaataac 93  Q
    |||||||||||||||||| | |||| |||||| |||||||||||||    
T  27763406 ttatggttgtcaaataaattttcaccaaattgattgttcaaataac 27763361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 51
Target Start/End: Original strand, 32046746 - 32046779
Alignment:
Q  18 ttctctctcatactcacattactttttactttat 51  Q
    ||||||||||||||||||||| ||||||||||||    
T  32046746 ttctctctcatactcacattattttttactttat 32046779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 54 - 102
Target Start/End: Complemental strand, 2777251 - 2777203
Alignment:
Q  54 ttgtcaaataaactatcacaaaattggttgttcaaataacacttatctt 102  Q
    |||||||||||  |||||| |||||| ||||||||||||||||| ||||    
T  2777251 ttgtcaaataagttatcaccaaattgattgttcaaataacacttctctt 2777203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 48 - 96
Target Start/End: Complemental strand, 11547469 - 11547421
Alignment:
Q  48 ttatggttgtcaaataaactatcacaaaattggttgttcaaataacact 96  Q
    |||||| ||||||||||| | |||| |||||| ||||||||||||||||    
T  11547469 ttatggctgtcaaataaattgtcaccaaattgattgttcaaataacact 11547421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 48 - 96
Target Start/End: Complemental strand, 22341115 - 22341067
Alignment:
Q  48 ttatggttgtcaaataaactatcacaaaattggttgttcaaataacact 96  Q
    |||| ||||||||||||  | |||| |||||||||||||||||||||||    
T  22341115 ttattgttgtcaaataagttgtcaccaaattggttgttcaaataacact 22341067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 53)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 49 - 96
Target Start/End: Original strand, 11633745 - 11633792
Alignment:
Q  49 tatggttgtcaaataaactatcacaaaattggttgttcaaataacact 96  Q
    ||||||||||||||||| |||||| |||||||||||||||||||||||    
T  11633745 tatggttgtcaaataaattatcaccaaattggttgttcaaataacact 11633792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 9 - 51
Target Start/End: Complemental strand, 10207005 - 10206963
Alignment:
Q  9 gcaacaattttctctctcatactcacattactttttactttat 51  Q
    ||||||| |||||||||||||||||||||||||||||||||||    
T  10207005 gcaacaactttctctctcatactcacattactttttactttat 10206963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 9 - 51
Target Start/End: Complemental strand, 24482995 - 24482953
Alignment:
Q  9 gcaacaattttctctctcatactcacattactttttactttat 51  Q
    ||||||| |||||||||||||||||||||||||||||||||||    
T  24482995 gcaacaactttctctctcatactcacattactttttactttat 24482953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 9 - 51
Target Start/End: Complemental strand, 37508530 - 37508488
Alignment:
Q  9 gcaacaattttctctctcatactcacattactttttactttat 51  Q
    ||||||| |||||||||||||||||||||||||||||||||||    
T  37508530 gcaacaactttctctctcatactcacattactttttactttat 37508488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 9 - 51
Target Start/End: Complemental strand, 44677516 - 44677474
Alignment:
Q  9 gcaacaattttctctctcatactcacattactttttactttat 51  Q
    |||||||||||||||||||||||||||||| ||||||||||||    
T  44677516 gcaacaattttctctctcatactcacattattttttactttat 44677474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 9 - 51
Target Start/End: Original strand, 46253661 - 46253703
Alignment:
Q  9 gcaacaattttctctctcatactcacattactttttactttat 51  Q
    ||||||||||| |||||||||||||||||||||||||||||||    
T  46253661 gcaacaattttttctctcatactcacattactttttactttat 46253703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 9 - 51
Target Start/End: Complemental strand, 49363283 - 49363241
Alignment:
Q  9 gcaacaattttctctctcatactcacattactttttactttat 51  Q
    ||||||| |||||||||||||||||||||||||||||||||||    
T  49363283 gcaacaactttctctctcatactcacattactttttactttat 49363241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 9 - 51
Target Start/End: Complemental strand, 50207002 - 50206960
Alignment:
Q  9 gcaacaattttctctctcatactcacattactttttactttat 51  Q
    ||||||| |||||||||||||||||||||||||||||||||||    
T  50207002 gcaacaactttctctctcatactcacattactttttactttat 50206960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 10 - 51
Target Start/End: Original strand, 33375900 - 33375941
Alignment:
Q  10 caacaattttctctctcatactcacattactttttactttat 51  Q
    ||||||||||||||||||||||||||||| ||||||||||||    
T  33375900 caacaattttctctctcatactcacattattttttactttat 33375941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 11 - 51
Target Start/End: Complemental strand, 39697252 - 39697212
Alignment:
Q  11 aacaattttctctctcatactcacattactttttactttat 51  Q
    ||||| |||||||||||||||||||||||||||||||||||    
T  39697252 aacaactttctctctcatactcacattactttttactttat 39697212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 11 - 51
Target Start/End: Original strand, 43905014 - 43905054
Alignment:
Q  11 aacaattttctctctcatactcacattactttttactttat 51  Q
    ||||| |||||||||||||||||||||||||||||||||||    
T  43905014 aacaactttctctctcatactcacattactttttactttat 43905054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 12 - 51
Target Start/End: Original strand, 8846533 - 8846572
Alignment:
Q  12 acaattttctctctcatactcacattactttttactttat 51  Q
    ||||||||||||||||||||||||||| ||||||||||||    
T  8846533 acaattttctctctcatactcacattattttttactttat 8846572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 12 - 51
Target Start/End: Original strand, 46019504 - 46019543
Alignment:
Q  12 acaattttctctctcatactcacattactttttactttat 51  Q
    |||| |||||||||||||||||||||||||||||||||||    
T  46019504 acaactttctctctcatactcacattactttttactttat 46019543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 12 - 51
Target Start/End: Original strand, 55400041 - 55400080
Alignment:
Q  12 acaattttctctctcatactcacattactttttactttat 51  Q
    |||| |||||||||||||||||||||||||||||||||||    
T  55400041 acaactttctctctcatactcacattactttttactttat 55400080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 9 - 51
Target Start/End: Original strand, 11633652 - 11633694
Alignment:
Q  9 gcaacaattttctctctcatactcacattactttttactttat 51  Q
    ||||||| ||||||||||||| |||||||||||||||||||||    
T  11633652 gcaacaactttctctctcatattcacattactttttactttat 11633694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 49 - 95
Target Start/End: Complemental strand, 29634011 - 29633965
Alignment:
Q  49 tatggttgtcaaataaactatcacaaaattggttgttcaaataacac 95  Q
    ||||||||||||||||| | |||| ||||||||||||||||||||||    
T  29634011 tatggttgtcaaataaattgtcactaaattggttgttcaaataacac 29633965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 9 - 51
Target Start/End: Original strand, 32767715 - 32767757
Alignment:
Q  9 gcaacaattttctctctcatactcacattactttttactttat 51  Q
    |||| ||||||||||||||||||||||||| ||||||||||||    
T  32767715 gcaataattttctctctcatactcacattattttttactttat 32767757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 11 - 51
Target Start/End: Original strand, 8821671 - 8821711
Alignment:
Q  11 aacaattttctctctcatactcacattactttttactttat 51  Q
    ||||| |||||||||||||||||||||| ||||||||||||    
T  8821671 aacaactttctctctcatactcacattattttttactttat 8821711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 11 - 51
Target Start/End: Original strand, 26996357 - 26996397
Alignment:
Q  11 aacaattttctctctcatactcacattactttttactttat 51  Q
    ||||| |||||||||||||||||||||| ||||||||||||    
T  26996357 aacaactttctctctcatactcacattattttttactttat 26996397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 52 - 104
Target Start/End: Complemental strand, 30863009 - 30862957
Alignment:
Q  52 ggttgtcaaataaactatcacaaaattggttgttcaaataacacttatctttc 104  Q
    |||||||||||||| | |||| |||||| ||||||||||||||||| ||||||    
T  30863009 ggttgtcaaataaattgtcaccaaattgattgttcaaataacacttctctttc 30862957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 48 - 96
Target Start/End: Complemental strand, 51973308 - 51973260
Alignment:
Q  48 ttatggttgtcaaataaactatcacaaaattggttgttcaaataacact 96  Q
    |||||||||||||||||| | |||| ||||| |||||||||||||||||    
T  51973308 ttatggttgtcaaataaattgtcaccaaattagttgttcaaataacact 51973260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 48 - 96
Target Start/End: Original strand, 54195471 - 54195519
Alignment:
Q  48 ttatggttgtcaaataaactatcacaaaattggttgttcaaataacact 96  Q
    |||||||||||||||||  | |||| |||||||||||||||||||||||    
T  54195471 ttatggttgtcaaataagttgtcaccaaattggttgttcaaataacact 54195519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 12 - 51
Target Start/End: Complemental strand, 1337868 - 1337829
Alignment:
Q  12 acaattttctctctcatactcacattactttttactttat 51  Q
    |||||||||| |||||||||||||||| ||||||||||||    
T  1337868 acaattttctatctcatactcacattattttttactttat 1337829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 12 - 51
Target Start/End: Complemental strand, 3281745 - 3281706
Alignment:
Q  12 acaattttctctctcatactcacattactttttactttat 51  Q
    |||| ||||||||| |||||||||||||||||||||||||    
T  3281745 acaactttctctcttatactcacattactttttactttat 3281706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 12 - 47
Target Start/End: Complemental strand, 3953504 - 3953469
Alignment:
Q  12 acaattttctctctcatactcacattactttttact 47  Q
    |||| |||||||||||||||||||||||||||||||    
T  3953504 acaactttctctctcatactcacattactttttact 3953469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 49 - 96
Target Start/End: Complemental strand, 10206912 - 10206865
Alignment:
Q  49 tatggttgtcaaataaactatcacaaaattggttgttcaaataacact 96  Q
    ||||||||||||||||  | |||| |||||||||||||||||||||||    
T  10206912 tatggttgtcaaataagttgtcaccaaattggttgttcaaataacact 10206865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 12 - 51
Target Start/End: Complemental strand, 16675555 - 16675516
Alignment:
Q  12 acaattttctctctcatactcacattactttttactttat 51  Q
    |||||||||||||||||| |||| ||||||||||||||||    
T  16675555 acaattttctctctcatattcacgttactttttactttat 16675516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 12 - 51
Target Start/End: Complemental strand, 24095435 - 24095396
Alignment:
Q  12 acaattttctctctcatactcacattactttttactttat 51  Q
    |||| |||||||||||||||||||||| ||||||||||||    
T  24095435 acaactttctctctcatactcacattattttttactttat 24095396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 12 - 51
Target Start/End: Original strand, 24645398 - 24645437
Alignment:
Q  12 acaattttctctctcatactcacattactttttactttat 51  Q
    |||| ||| |||||||||||||||||||||||||||||||    
T  24645398 acaactttttctctcatactcacattactttttactttat 24645437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 49 - 96
Target Start/End: Original strand, 26996447 - 26996494
Alignment:
Q  49 tatggttgtcaaataaactatcacaaaattggttgttcaaataacact 96  Q
    ||||||||||||||||| | |||| ||||| |||||||||||||||||    
T  26996447 tatggttgtcaaataaattgtcaccaaatttgttgttcaaataacact 26996494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 12 - 51
Target Start/End: Complemental strand, 34057982 - 34057943
Alignment:
Q  12 acaattttctctctcatactcacattactttttactttat 51  Q
    |||| |||||||||||||||||| ||||||||||||||||    
T  34057982 acaactttctctctcatactcacgttactttttactttat 34057943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 49 - 96
Target Start/End: Original strand, 36121953 - 36122000
Alignment:
Q  49 tatggttgtcaaataaactatcacaaaattggttgttcaaataacact 96  Q
    ||||||||||||||||  | |||| |||||||||||||||||||||||    
T  36121953 tatggttgtcaaataagttgtcaccaaattggttgttcaaataacact 36122000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 49 - 96
Target Start/End: Complemental strand, 39671036 - 39670989
Alignment:
Q  49 tatggttgtcaaataaactatcacaaaattggttgttcaaataacact 96  Q
    ||||||||||||||||  | |||| |||||||||||||||||||||||    
T  39671036 tatggttgtcaaataagttgtcaccaaattggttgttcaaataacact 39670989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 9 - 51
Target Start/End: Complemental strand, 39671130 - 39671087
Alignment:
Q  9 gcaacaattttctctct-catactcacattactttttactttat 51  Q
    ||||||| ||||||||| ||||||||||||||||||||||||||    
T  39671130 gcaacaactttctctcttcatactcacattactttttactttat 39671087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 49 - 96
Target Start/End: Original strand, 43905105 - 43905152
Alignment:
Q  49 tatggttgtcaaataaactatcacaaaattggttgttcaaataacact 96  Q
    ||||||||||||||||  | |||| |||||||||||||||||||||||    
T  43905105 tatggttgtcaaataagttttcactaaattggttgttcaaataacact 43905152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 49 - 96
Target Start/End: Complemental strand, 44677423 - 44677376
Alignment:
Q  49 tatggttgtcaaataaactatcacaaaattggttgttcaaataacact 96  Q
    ||||||||||||||||  | |||| |||||||||||||||||||||||    
T  44677423 tatggttgtcaaataagttgtcaccaaattggttgttcaaataacact 44677376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 12 - 51
Target Start/End: Complemental strand, 46852161 - 46852122
Alignment:
Q  12 acaattttctctctcatactcacattactttttactttat 51  Q
    |||| ||||||||||||||||| |||||||||||||||||    
T  46852161 acaactttctctctcatactcatattactttttactttat 46852122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 12 - 51
Target Start/End: Original strand, 49761349 - 49761388
Alignment:
Q  12 acaattttctctctcatactcacattactttttactttat 51  Q
    |||| |||||||||||||||||||||| ||||||||||||    
T  49761349 acaactttctctctcatactcacattattttttactttat 49761388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 12 - 51
Target Start/End: Original strand, 52937225 - 52937264
Alignment:
Q  12 acaattttctctctcatactcacattactttttactttat 51  Q
    |||| ||||| |||||||||||||||||||||||||||||    
T  52937225 acaactttctatctcatactcacattactttttactttat 52937264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 49 - 96
Target Start/End: Original strand, 55013134 - 55013181
Alignment:
Q  49 tatggttgtcaaataaactatcacaaaattggttgttcaaataacact 96  Q
    |||| |||||||||||| | |||| |||||||||||||||||||||||    
T  55013134 tatgattgtcaaataaattgtcaccaaattggttgttcaaataacact 55013181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 9 - 51
Target Start/End: Original strand, 390848 - 390890
Alignment:
Q  9 gcaacaattttctctctcatactcacattactttttactttat 51  Q
    ||||||| ||| |||||||||||||||||| ||||||||||||    
T  390848 gcaacaactttttctctcatactcacattattttttactttat 390890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 12 - 49
Target Start/End: Complemental strand, 27541532 - 27541494
Alignment:
Q  12 acaattttctctctcatactcacatta-ctttttacttt 49  Q
    ||||||||||||||||||||||||||| |||||||||||    
T  27541532 acaattttctctctcatactcacattatctttttacttt 27541494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 9 - 51
Target Start/End: Original strand, 30909068 - 30909110
Alignment:
Q  9 gcaacaattttctctctcatactcacattactttttactttat 51  Q
    ||||||| ||||||||| ||| |||||||||||||||||||||    
T  30909068 gcaacaactttctctcttatattcacattactttttactttat 30909110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 49 - 103
Target Start/End: Original strand, 32767808 - 32767862
Alignment:
Q  49 tatggttgtcaaataaactatcacaaaattggttgttcaaataacacttatcttt 103  Q
    ||||||||||||||||  | |||| |||||| |||||||||||||||| ||||||    
T  32767808 tatggttgtcaaataagttgtcaccaaattgattgttcaaataacactcatcttt 32767862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 21 - 51
Target Start/End: Complemental strand, 39020179 - 39020149
Alignment:
Q  21 tctctcatactcacattactttttactttat 51  Q
    |||||||||||||||||||||||||||||||    
T  39020179 tctctcatactcacattactttttactttat 39020149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 12 - 49
Target Start/End: Complemental strand, 45711469 - 45711431
Alignment:
Q  12 acaattttctctctcatactcacatta-ctttttacttt 49  Q
    ||||||||||||||||||||||||||| |||||||||||    
T  45711469 acaattttctctctcatactcacattatctttttacttt 45711431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 9 - 51
Target Start/End: Complemental strand, 46982935 - 46982893
Alignment:
Q  9 gcaacaattttctctctcatactcacattactttttactttat 51  Q
    ||||||| ||||||||||||||||| |||||||| ||||||||    
T  46982935 gcaacaaatttctctctcatactcatattactttctactttat 46982893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 17 - 51
Target Start/End: Complemental strand, 51465938 - 51465904
Alignment:
Q  17 tttctctctcatactcacattactttttactttat 51  Q
    ||||||||||||||||| |||||||||||||||||    
T  51465938 tttctctctcatactcatattactttttactttat 51465904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 14 - 51
Target Start/End: Original strand, 22371235 - 22371272
Alignment:
Q  14 aattttctctctcatactcacattactttttactttat 51  Q
    |||||||||||||||||| |||||| ||||||||||||    
T  22371235 aattttctctctcatacttacattattttttactttat 22371272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 53 - 102
Target Start/End: Complemental strand, 46982838 - 46982789
Alignment:
Q  53 gttgtcaaataaactatcacaaaattggttgttcaaataacacttatctt 102  Q
    ||||||||||||| | |||| ||||| ||||||||||||||||| |||||    
T  46982838 gttgtcaaataaattgtcaccaaattagttgttcaaataacactcatctt 46982789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 53 - 102
Target Start/End: Complemental strand, 49363186 - 49363137
Alignment:
Q  53 gttgtcaaataaactatcacaaaattggttgttcaaataacacttatctt 102  Q
    ||||||||||||| |||| | |||||| ||||||||||||||||| ||||    
T  49363186 gttgtcaaataaattatccccaaattgattgttcaaataacacttctctt 49363137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 51 - 96
Target Start/End: Original strand, 49417708 - 49417753
Alignment:
Q  51 tggttgtcaaataaactatcacaaaattggttgttcaaataacact 96  Q
    ||||||| ||||||  | ||||||||||||||||||||||||||||    
T  49417708 tggttgttaaataagttgtcacaaaattggttgttcaaataacact 49417753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 12 - 51
Target Start/End: Complemental strand, 42358668 - 42358628
Alignment:
Q  12 acaattttctctctcatactcacatta-ctttttactttat 51  Q
    |||| |||||||||||||||||||||| |||||||||||||    
T  42358668 acaactttctctctcatactcacattatctttttactttat 42358628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 57)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 12 - 51
Target Start/End: Complemental strand, 40316973 - 40316934
Alignment:
Q  12 acaattttctctctcatactcacattactttttactttat 51  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  40316973 acaattttctctctcatactcacattactttttactttat 40316934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 9 - 51
Target Start/End: Original strand, 26837491 - 26837533
Alignment:
Q  9 gcaacaattttctctctcatactcacattactttttactttat 51  Q
    |||||||||||||||||||||||||| ||||||||||||||||    
T  26837491 gcaacaattttctctctcatactcacgttactttttactttat 26837533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 9 - 51
Target Start/End: Original strand, 29586032 - 29586074
Alignment:
Q  9 gcaacaattttctctctcatactcacattactttttactttat 51  Q
    |||||||||||||||||||||||||||||| ||||||||||||    
T  29586032 gcaacaattttctctctcatactcacattattttttactttat 29586074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 9 - 51
Target Start/End: Complemental strand, 36577444 - 36577402
Alignment:
Q  9 gcaacaattttctctctcatactcacattactttttactttat 51  Q
    ||||||| |||||||||||||||||||||||||||||||||||    
T  36577444 gcaacaactttctctctcatactcacattactttttactttat 36577402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 49 - 102
Target Start/End: Complemental strand, 38303627 - 38303574
Alignment:
Q  49 tatggttgtcaaataaactatcacaaaattggttgttcaaataacacttatctt 102  Q
    ||||||||||||||||  |||||| ||||||||||||||||||||||| |||||    
T  38303627 tatggttgtcaaataagttatcaccaaattggttgttcaaataacactcatctt 38303574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 11 - 51
Target Start/End: Original strand, 902679 - 902719
Alignment:
Q  11 aacaattttctctctcatactcacattactttttactttat 51  Q
    ||||| |||||||||||||||||||||||||||||||||||    
T  902679 aacaactttctctctcatactcacattactttttactttat 902719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 12 - 51
Target Start/End: Complemental strand, 10890075 - 10890036
Alignment:
Q  12 acaattttctctctcatactcacattactttttactttat 51  Q
    |||| |||||||||||||||||||||||||||||||||||    
T  10890075 acaactttctctctcatactcacattactttttactttat 10890036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 12 - 51
Target Start/End: Original strand, 13489704 - 13489743
Alignment:
Q  12 acaattttctctctcatactcacattactttttactttat 51  Q
    |||| |||||||||||||||||||||||||||||||||||    
T  13489704 acaactttctctctcatactcacattactttttactttat 13489743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 12 - 51
Target Start/End: Complemental strand, 15705091 - 15705052
Alignment:
Q  12 acaattttctctctcatactcacattactttttactttat 51  Q
    |||| |||||||||||||||||||||||||||||||||||    
T  15705091 acaactttctctctcatactcacattactttttactttat 15705052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 12 - 51
Target Start/End: Complemental strand, 19969591 - 19969552
Alignment:
Q  12 acaattttctctctcatactcacattactttttactttat 51  Q
    |||| |||||||||||||||||||||||||||||||||||    
T  19969591 acaactttctctctcatactcacattactttttactttat 19969552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 12 - 51
Target Start/End: Complemental strand, 32915101 - 32915062
Alignment:
Q  12 acaattttctctctcatactcacattactttttactttat 51  Q
    |||| |||||||||||||||||||||||||||||||||||    
T  32915101 acaactttctctctcatactcacattactttttactttat 32915062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 12 - 51
Target Start/End: Complemental strand, 50781599 - 50781560
Alignment:
Q  12 acaattttctctctcatactcacattactttttactttat 51  Q
    |||| |||||||||||||||||||||||||||||||||||    
T  50781599 acaactttctctctcatactcacattactttttactttat 50781560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 9 - 51
Target Start/End: Original strand, 1790547 - 1790589
Alignment:
Q  9 gcaacaattttctctctcatactcacattactttttactttat 51  Q
    ||||||| ||||||||||||||||| |||||||||||||||||    
T  1790547 gcaacaactttctctctcatactcaaattactttttactttat 1790589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 9 - 51
Target Start/End: Original strand, 3603150 - 3603192
Alignment:
Q  9 gcaacaattttctctctcatactcacattactttttactttat 51  Q
    ||||||| ||||||||||||||||||||||||||||| |||||    
T  3603150 gcaacaactttctctctcatactcacattactttttagtttat 3603192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 9 - 51
Target Start/End: Complemental strand, 8411750 - 8411708
Alignment:
Q  9 gcaacaattttctctctcatactcacattactttttactttat 51  Q
    ||||||| |||||||||||||||||||||| ||||||||||||    
T  8411750 gcaacaactttctctctcatactcacattattttttactttat 8411708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 9 - 51
Target Start/End: Original strand, 9008264 - 9008306
Alignment:
Q  9 gcaacaattttctctctcatactcacattactttttactttat 51  Q
    ||||||| |||||||||||||||||||||| ||||||||||||    
T  9008264 gcaacaactttctctctcatactcacattattttttactttat 9008306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 9 - 51
Target Start/End: Complemental strand, 20565150 - 20565108
Alignment:
Q  9 gcaacaattttctctctcatactcacattactttttactttat 51  Q
    ||||||| |||||||||||||||||||||||| ||||||||||    
T  20565150 gcaacaactttctctctcatactcacattactctttactttat 20565108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 9 - 51
Target Start/End: Original strand, 21340561 - 21340603
Alignment:
Q  9 gcaacaattttctctctcatactcacattactttttactttat 51  Q
    ||||||| ||||||| |||||||||||||||||||||||||||    
T  21340561 gcaacaactttctctttcatactcacattactttttactttat 21340603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 9 - 51
Target Start/End: Original strand, 35136883 - 35136925
Alignment:
Q  9 gcaacaattttctctctcatactcacattactttttactttat 51  Q
    ||||||| ||||| |||||||||||||||||||||||||||||    
T  35136883 gcaacaactttctttctcatactcacattactttttactttat 35136925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 9 - 51
Target Start/End: Original strand, 44294054 - 44294096
Alignment:
Q  9 gcaacaattttctctctcatactcacattactttttactttat 51  Q
    |||| ||||||||||||||||||||||||| ||||||||||||    
T  44294054 gcaataattttctctctcatactcacattattttttactttat 44294096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 9 - 51
Target Start/End: Complemental strand, 46082153 - 46082111
Alignment:
Q  9 gcaacaattttctctctcatactcacattactttttactttat 51  Q
    ||||||| |||||||| ||||||||||||||||||||||||||    
T  46082153 gcaacaactttctctcgcatactcacattactttttactttat 46082111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 10 - 51
Target Start/End: Complemental strand, 34040531 - 34040490
Alignment:
Q  10 caacaattttctctctcatactcacattactttttactttat 51  Q
    |||||| |||||||||||||||||||||| ||||||||||||    
T  34040531 caacaactttctctctcatactcacattattttttactttat 34040490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 51 - 96
Target Start/End: Complemental strand, 51286305 - 51286260
Alignment:
Q  51 tggttgtcaaataaactatcacaaaattggttgttcaaataacact 96  Q
    ||||||||||||||  | ||||||||||||||||||||||||||||    
T  51286305 tggttgtcaaataagttgtcacaaaattggttgttcaaataacact 51286260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 51 - 95
Target Start/End: Original strand, 47214341 - 47214385
Alignment:
Q  51 tggttgtcaaataaactatcacaaaattggttgttcaaataacac 95  Q
    ||||||||||||||  | |||||||||||||||||||||||||||    
T  47214341 tggttgtcaaataagttgtcacaaaattggttgttcaaataacac 47214385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 49 - 96
Target Start/End: Original strand, 902770 - 902817
Alignment:
Q  49 tatggttgtcaaataaactatcacaaaattggttgttcaaataacact 96  Q
    |||| ||||||||||| ||||||  |||||||||||||||||||||||    
T  902770 tatgattgtcaaataagctatcatcaaattggttgttcaaataacact 902817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 12 - 51
Target Start/End: Original strand, 8200117 - 8200156
Alignment:
Q  12 acaattttctctctcatactcacattactttttactttat 51  Q
    |||| |||||||||||||||||||||| ||||||||||||    
T  8200117 acaactttctctctcatactcacattattttttactttat 8200156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 12 - 51
Target Start/End: Original strand, 16986980 - 16987019
Alignment:
Q  12 acaattttctctctcatactcacattactttttactttat 51  Q
    |||| |||||||||||||||||||||| ||||||||||||    
T  16986980 acaactttctctctcatactcacattattttttactttat 16987019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 12 - 51
Target Start/End: Original strand, 18336188 - 18336227
Alignment:
Q  12 acaattttctctctcatactcacattactttttactttat 51  Q
    |||| |||||||||||||||||||||| ||||||||||||    
T  18336188 acaactttctctctcatactcacattagtttttactttat 18336227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 49 - 96
Target Start/End: Complemental strand, 20565057 - 20565010
Alignment:
Q  49 tatggttgtcaaataaactatcacaaaattggttgttcaaataacact 96  Q
    ||||||||||||||||  | |||| |||||||||||||||||||||||    
T  20565057 tatggttgtcaaataagttgtcaccaaattggttgttcaaataacact 20565010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 49 - 96
Target Start/End: Original strand, 26837584 - 26837631
Alignment:
Q  49 tatggttgtcaaataaactatcacaaaattggttgttcaaataacact 96  Q
    ||||||||||||||||  | |||| |||||||||||||||||||||||    
T  26837584 tatggttgtcaaataagttgtcaccaaattggttgttcaaataacact 26837631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 12 - 51
Target Start/End: Complemental strand, 33054117 - 33054078
Alignment:
Q  12 acaattttctctctcatactcacattactttttactttat 51  Q
    |||| |||||||||||||||||||||| ||||||||||||    
T  33054117 acaactttctctctcatactcacattattttttactttat 33054078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 12 - 51
Target Start/End: Complemental strand, 34254380 - 34254341
Alignment:
Q  12 acaattttctctctcatactcacattactttttactttat 51  Q
    |||| ||| |||||||||||||||||||||||||||||||    
T  34254380 acaactttatctctcatactcacattactttttactttat 34254341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 49 - 96
Target Start/End: Complemental strand, 36779208 - 36779161
Alignment:
Q  49 tatggttgtcaaataaactatcacaaaattggttgttcaaataacact 96  Q
    |||| |||||||||||| |||||| |||||| ||||||||||||||||    
T  36779208 tatgattgtcaaataaattatcaccaaattgattgttcaaataacact 36779161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 12 - 51
Target Start/End: Original strand, 44632570 - 44632609
Alignment:
Q  12 acaattttctctctcatactcacattactttttactttat 51  Q
    |||| |||||||||||||||||||||| ||||||||||||    
T  44632570 acaactttctctctcatactcacattattttttactttat 44632609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 12 - 51
Target Start/End: Original strand, 47214250 - 47214289
Alignment:
Q  12 acaattttctctctcatactcacattactttttactttat 51  Q
    |||| |||||||||||||||||||||| ||||||||||||    
T  47214250 acaactttctctctcatactcacattattttttactttat 47214289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 12 - 51
Target Start/End: Complemental strand, 48220173 - 48220134
Alignment:
Q  12 acaattttctctctcatactcacattactttttactttat 51  Q
    |||| |||||||||||||||||||||| ||||||||||||    
T  48220173 acaactttctctctcatactcacattattttttactttat 48220134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 12 - 51
Target Start/End: Complemental strand, 49241534 - 49241495
Alignment:
Q  12 acaattttctctctcatactcacattactttttactttat 51  Q
    |||| |||||||||||||||||||||| ||||||||||||    
T  49241534 acaactttctctctcatactcacattattttttactttat 49241495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 12 - 51
Target Start/End: Original strand, 50824783 - 50824822
Alignment:
Q  12 acaattttctctctcatactcacattactttttactttat 51  Q
    |||||||||||||||||||||| |||| ||||||||||||    
T  50824783 acaattttctctctcatactcatattattttttactttat 50824822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 12 - 51
Target Start/End: Original strand, 52362524 - 52362563
Alignment:
Q  12 acaattttctctctcatactcacattactttttactttat 51  Q
    |||| |||||||||||||||||||||| ||||||||||||    
T  52362524 acaactttctctctcatactcacattattttttactttat 52362563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 12 - 51
Target Start/End: Complemental strand, 52714930 - 52714891
Alignment:
Q  12 acaattttctctctcatactcacattactttttactttat 51  Q
    |||||||||| |||||||||||| ||||||||||||||||    
T  52714930 acaattttctttctcatactcacgttactttttactttat 52714891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 9 - 51
Target Start/End: Original strand, 756895 - 756937
Alignment:
Q  9 gcaacaattttctctctcatactcacattactttttactttat 51  Q
    ||||||| ||||| |||||||||||||||| ||||||||||||    
T  756895 gcaacaactttctttctcatactcacattattttttactttat 756937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 9 - 51
Target Start/End: Complemental strand, 3024782 - 3024740
Alignment:
Q  9 gcaacaattttctctctcatactcacattactttttactttat 51  Q
    |||| |||||||||||||||||||| |||| ||||||||||||    
T  3024782 gcaataattttctctctcatactcatattattttttactttat 3024740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 17 - 51
Target Start/End: Complemental strand, 21486341 - 21486307
Alignment:
Q  17 tttctctctcatactcacattactttttactttat 51  Q
    |||||||||||||||||||||| ||||||||||||    
T  21486341 tttctctctcatactcacattattttttactttat 21486307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 49 - 103
Target Start/End: Complemental strand, 33024510 - 33024456
Alignment:
Q  49 tatggttgtcaaataaactatcacaaaattggttgttcaaataacacttatcttt 103  Q
    ||||||||||||||||  | |||| |||||| |||||||||||||||| ||||||    
T  33024510 tatggttgtcaaataagttgtcaccaaattgattgttcaaataacactcatcttt 33024456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 9 - 51
Target Start/End: Complemental strand, 33024603 - 33024561
Alignment:
Q  9 gcaacaattttctctctcatactcacattactttttactttat 51  Q
    ||||||| |||||||||||||||||||||| ||||| ||||||    
T  33024603 gcaacaactttctctctcatactcacattatttttttctttat 33024561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 12 - 49
Target Start/End: Original strand, 48470680 - 48470718
Alignment:
Q  12 acaattttctctctcatactcacatta-ctttttacttt 49  Q
    ||||||||||||||||||||||||||| |||||||||||    
T  48470680 acaattttctctctcatactcacattacctttttacttt 48470718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 9 - 51
Target Start/End: Complemental strand, 50328173 - 50328131
Alignment:
Q  9 gcaacaattttctctctcatactcacattactttttactttat 51  Q
    ||||||| ||||||| |||||||||| ||||||||||||||||    
T  50328173 gcaacaactttctctttcatactcacgttactttttactttat 50328131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 49 - 95
Target Start/End: Original strand, 51191920 - 51191966
Alignment:
Q  49 tatggttgtcaaataaactatcacaaaattggttgttcaaataacac 95  Q
    ||||||||||||||||  | |||| ||||||||||||||||||||||    
T  51191920 tatggttgtcaaataagttgtcaccaaattggttgttcaaataacac 51191966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 49 - 94
Target Start/End: Original strand, 756988 - 757033
Alignment:
Q  49 tatggttgtcaaataaactatcacaaaattggttgttcaaataaca 94  Q
    ||||||||||||||||  | |||| |||||||||||||||||||||    
T  756988 tatggttgtcaaataagttgtcaccaaattggttgttcaaataaca 757033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 48 - 97
Target Start/End: Original strand, 36494582 - 36494631
Alignment:
Q  48 ttatggttgtcaaataaactatcacaaaattggttgttcaaataacactt 97  Q
    ||||| |||||||||||  | |||| ||||||||||||||||||||||||    
T  36494582 ttatgattgtcaaataagttgtcaccaaattggttgttcaaataacactt 36494631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 48 - 93
Target Start/End: Complemental strand, 36673672 - 36673627
Alignment:
Q  48 ttatggttgtcaaataaactatcacaaaattggttgttcaaataac 93  Q
    |||||||||||||||||  |||||| |||||| |||||||||||||    
T  36673672 ttatggttgtcaaataagttatcaccaaattgattgttcaaataac 36673627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 10 - 51
Target Start/End: Complemental strand, 38303719 - 38303678
Alignment:
Q  10 caacaattttctctctcatactcacattactttttactttat 51  Q
    |||||| |||||||||||||||| ||||| ||||||||||||    
T  38303719 caacaactttctctctcatactcgcattattttttactttat 38303678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 14 - 51
Target Start/End: Complemental strand, 46172434 - 46172397
Alignment:
Q  14 aattttctctctcatactcacattactttttactttat 51  Q
    ||||||||||||||||||||||||| |||||| |||||    
T  46172434 aattttctctctcatactcacattattttttattttat 46172397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 14 - 51
Target Start/End: Complemental strand, 46543469 - 46543432
Alignment:
Q  14 aattttctctctcatactcacattactttttactttat 51  Q
    |||||||||||||||||||||| || ||||||||||||    
T  46543469 aattttctctctcatactcacactattttttactttat 46543432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 9 - 49
Target Start/End: Complemental strand, 1852983 - 1852943
Alignment:
Q  9 gcaacaattttctctctcatactcacattactttttacttt 49  Q
    ||||||| |||||||||||||||||||||| ||||| ||||    
T  1852983 gcaacaactttctctctcatactcacattatttttttcttt 1852943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 12 - 48
Target Start/End: Original strand, 29154822 - 29154858
Alignment:
Q  12 acaattttctctctcatactcacattactttttactt 48  Q
    |||| |||||||||||||||||||||| |||||||||    
T  29154822 acaactttctctctcatactcacattattttttactt 29154858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 11 - 51
Target Start/End: Original strand, 51191829 - 51191869
Alignment:
Q  11 aacaattttctctctcatactcacattactttttactttat 51  Q
    ||||| ||| ||||||||||||||||||| |||||||||||    
T  51191829 aacaactttttctctcatactcacattacattttactttat 51191869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0471 (Bit Score: 39; Significance: 0.0000000000006; HSPs: 2)
Name: scaffold0471
Description:

Target: scaffold0471; HSP #1
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 9 - 51
Target Start/End: Original strand, 46 - 88
Alignment:
Q  9 gcaacaattttctctctcatactcacattactttttactttat 51  Q
    ||||||||||||||| |||||||||||||||||||||||||||    
T  46 gcaacaattttctctttcatactcacattactttttactttat 88  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0471; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 49 - 108
Target Start/End: Original strand, 139 - 198
Alignment:
Q  49 tatggttgtcaaataaactatcacaaaattggttgttcaaataacacttatctttccaaa 108  Q
    ||||||||||||||||  | |||| |||||||||||||||||||||||  ||||||||||    
T  139 tatggttgtcaaataagttgtcaccaaattggttgttcaaataacactcctctttccaaa 198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0321 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0321
Description:

Target: scaffold0321; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 9 - 51
Target Start/End: Original strand, 19675 - 19717
Alignment:
Q  9 gcaacaattttctctctcatactcacattactttttactttat 51  Q
    ||||||| |||||||||||||||||||||||| ||||||||||    
T  19675 gcaacaactttctctctcatactcacattactctttactttat 19717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0204 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0204
Description:

Target: scaffold0204; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 9 - 51
Target Start/End: Original strand, 23115 - 23157
Alignment:
Q  9 gcaacaattttctctctcatactcacattactttttactttat 51  Q
    ||||||||||||||||||||| |||||||| ||||||||||||    
T  23115 gcaacaattttctctctcatattcacattattttttactttat 23157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0532 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0532
Description:

Target: scaffold0532; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 12 - 51
Target Start/End: Original strand, 11006 - 11045
Alignment:
Q  12 acaattttctctctcatactcacattactttttactttat 51  Q
    |||| |||||||||||||||||||||| ||||||||||||    
T  11006 acaactttctctctcatactcacattattttttactttat 11045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0221 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0221
Description:

Target: scaffold0221; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 9 - 51
Target Start/End: Original strand, 8253 - 8295
Alignment:
Q  9 gcaacaattttctctctcatactcacattactttttactttat 51  Q
    ||||||| ||||||||||||| ||| |||||||||||||||||    
T  8253 gcaacaactttctctctcatattcatattactttttactttat 8295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0449 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0449
Description:

Target: scaffold0449; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 11 - 51
Target Start/End: Original strand, 9244 - 9284
Alignment:
Q  11 aacaattttctctctcatactcacattactttttactttat 51  Q
    ||||| ||||||||| ||||||| |||||||||||||||||    
T  9244 aacaactttctctcttatactcatattactttttactttat 9284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University