View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF3288_high_40 (Length: 215)
Name: NF3288_high_40
Description: NF3288
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3288_high_40 |
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Alignment Details
Target: chr2 (Bit Score: 154; Significance: 7e-82; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 154; E-Value: 7e-82
Query Start/End: Original strand, 36 - 193
Target Start/End: Original strand, 8803917 - 8804074
Alignment:
| Q |
36 |
caaggaaaagagaaagaggggttaagaaacccatctgtgtgaaggtgaaggtttcaaagaagaatggtaaatcaagcaatagtttgccttgattgacaca |
135 |
Q |
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| T |
8803917 |
caaggaaaagagaaagaggggttaagaaacccatctctgtgaaggtgaaggtttcaaagaagaatggtaaatcaagcaatagtttgccttgattgacaca |
8804016 |
T |
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| Q |
136 |
catgacctcccttgacgatccatccaatcagtgggtccaaaatatccttgcagatttt |
193 |
Q |
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| T |
8804017 |
catgacctcccttgacgatccatccaatcagtgggtccaaaatatccttgcagatttt |
8804074 |
T |
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