View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF3288_low_26 (Length: 298)
Name: NF3288_low_26
Description: NF3288
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3288_low_26 |
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Alignment Details
Target: chr7 (Bit Score: 259; Significance: 1e-144; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 259; E-Value: 1e-144
Query Start/End: Original strand, 19 - 293
Target Start/End: Complemental strand, 42325923 - 42325650
Alignment:
| Q |
19 |
ggactagctagttgaaatgaacagaaccaaaccaatatcaagagtggtgggagcacctgaacctgtatttttacaccctatagaatccctcttttctata |
118 |
Q |
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| T |
42325923 |
ggactagctagttgaaatgaacagaaccaaaccaatatcaagagtggtgggagcacctgaacctgtatttttacaccctatagaatccctcttttctata |
42325824 |
T |
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| Q |
119 |
gatctaattaaattatatcttgcatgtaacatatttaaaatgggaaaaataacacttaaccttgaaagatacttttaagacaatataaataagaagctca |
218 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
42325823 |
gatctaattaaattatatcttgcatgtaacatatttaaaatgggaaaaataacacttaaccttgaaagatacttttaagacaatataaataagaagctca |
42325724 |
T |
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| Q |
219 |
acataactccttttcctcaacaagaagagttatctgagttgtactcttaagtttccactcaactttcttttctct |
293 |
Q |
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|||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||| |
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| T |
42325723 |
acataactcc-tttcctcaacaagaagaattatctgagttgtactcttaagtttccactcaaatttcttttctct |
42325650 |
T |
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