View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF3288_low_33 (Length: 250)
Name: NF3288_low_33
Description: NF3288
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3288_low_33 |
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| [»] chr2 (1 HSPs) |
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Alignment Details
Target: chr2 (Bit Score: 163; Significance: 4e-87; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 163; E-Value: 4e-87
Query Start/End: Original strand, 68 - 250
Target Start/End: Complemental strand, 14139243 - 14139061
Alignment:
| Q |
68 |
gtttcattttgatccttatatgtgtgaaacagtgtcacagtaatcactaaagatatcttttgtaagcaattttgtcaaccaaattaactaaccaaattag |
167 |
Q |
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| T |
14139243 |
gtttcattttgatccttatatgtgtgaaacaatgtcacaatattcagtaaagatatcttttgtaagcaattttgtcaaccaaattaactaaccaaattag |
14139144 |
T |
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| Q |
168 |
atttaattgaggcctaaactaaccaaatatacatttgagagccaaactaaatagaaactaaagacacatttagatatgttctt |
250 |
Q |
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| T |
14139143 |
atttaattgaggcctaaactaaccaaatatacatttgagagccaaagtaaatagaaactaaagacacatttagatatgttctt |
14139061 |
T |
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