View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF3289_low_13 (Length: 250)
Name: NF3289_low_13
Description: NF3289
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3289_low_13 |
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Alignment Details
Target: chr8 (Bit Score: 226; Significance: 1e-125; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 226; E-Value: 1e-125
Query Start/End: Original strand, 1 - 242
Target Start/End: Original strand, 43726085 - 43726326
Alignment:
| Q |
1 |
ttataatttgtcgtctaataatactgtggagttgcctatagtggagtttgaagtaaatgatgggaaatcgtggttgttgccgaaggagagttatttgtat |
100 |
Q |
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| T |
43726085 |
ttataatttgtcgtctaataatactgtggagttgccgatattggagtttgaagtaaatgatgggaaatcgtggttgttgccgaaggagagttatttgtat |
43726184 |
T |
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| Q |
101 |
gcagtggataagaatggaacattttgctttgcttttgcaccgtcaaaaggatcgttttcaattttagggactttacagcaatacgggacacgtgtcacct |
200 |
Q |
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|||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
43726185 |
gcagtggataagaatggaacattttgctttgcgtttgcaccgtcaaaaggatcgttttcaattttagggactttacagcaatacgggacacgtgtcacct |
43726284 |
T |
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| Q |
201 |
ttgatcttgttaactctttcgtttatttacacactctctgct |
242 |
Q |
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|||||||||||||||||||||||||||||||||| ||||||| |
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| T |
43726285 |
ttgatcttgttaactctttcgtttatttacacaccctctgct |
43726326 |
T |
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