View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF3289_low_20 (Length: 237)
Name: NF3289_low_20
Description: NF3289
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3289_low_20 |
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Alignment Details
Target: chr2 (Bit Score: 170; Significance: 2e-91; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 170; E-Value: 2e-91
Query Start/End: Original strand, 52 - 221
Target Start/End: Complemental strand, 36057026 - 36056857
Alignment:
| Q |
52 |
tggtgaaaatgtataatttagccagaaggcccctacactgttttggagtaccaaccaccaataattgtttagtggtttcttatctcgtatacagtcattt |
151 |
Q |
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| T |
36057026 |
tggtgaaaatgtataatttagccagaaggcccctacactgttttggagtaccaaccaccaataattgtttagtggtttcttatctcgtatacagtcattt |
36056927 |
T |
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| Q |
152 |
ttagcaactttacattaacagctacaaacaaagttgaaaagagcaaagaagaataatgtggtcaagatat |
221 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
36056926 |
ttagcaactttacattaacagctacaaacaaagttgaaaagagcaaagaagaataatgtggtcaagatat |
36056857 |
T |
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