View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF3291R-Insertion-14 (Length: 445)

Name: NF3291R-Insertion-14
Description: NF3291R
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF3291R-Insertion-14
NF3291R-Insertion-14
[»] chr3 (72 HSPs)
chr3 (303-435)||(50017045-50017177)
chr3 (271-435)||(46572868-46573038)
chr3 (296-435)||(41890520-41890664)
chr3 (298-435)||(42601748-42601891)
chr3 (304-432)||(49823116-49823250)
chr3 (296-435)||(25832667-25832811)
chr3 (301-435)||(50033657-50033797)
chr3 (303-435)||(42601448-42601585)
chr3 (316-435)||(51427105-51427230)
chr3 (271-435)||(37410362-37410522)
chr3 (306-435)||(35423952-35424087)
chr3 (268-435)||(25450577-25450740)
chr3 (316-435)||(33934996-33935120)
chr3 (308-435)||(49147231-49147364)
chr3 (271-432)||(25790720-25790887)
chr3 (283-435)||(43473862-43474016)
chr3 (283-435)||(50415772-50415931)
chr3 (273-435)||(20139322-20139492)
chr3 (301-435)||(33795438-33795575)
chr3 (343-435)||(49357440-49357538)
chr3 (308-435)||(49407280-49407413)
chr3 (283-443)||(138947-139115)
chr3 (283-435)||(30418372-30418530)
chr3 (283-435)||(29701654-29701813)
chr3 (316-435)||(35853134-35853260)
chr3 (316-435)||(49710331-49710457)
chr3 (283-435)||(17466488-17466646)
chr3 (309-435)||(27847407-27847540)
chr3 (320-426)||(33748694-33748806)
chr3 (297-435)||(6048638-6048783)
chr3 (319-435)||(15493765-15493885)
chr3 (283-435)||(47144146-47144304)
chr3 (283-435)||(5845082-5845240)
chr3 (316-435)||(43022653-43022779)
chr3 (283-435)||(47701005-47701164)
chr3 (283-435)||(12974640-12974800)
chr3 (283-435)||(4045952-4046111)
chr3 (298-435)||(11908006-11908150)
chr3 (283-435)||(32120380-32120539)
chr3 (298-435)||(26165496-26165640)
chr3 (316-435)||(28410399-28410525)
chr3 (316-435)||(41183279-41183405)
chr3 (283-435)||(44084281-44084439)
chr3 (283-435)||(55026711-55026870)
chr3 (283-370)||(7008027-7008115)
chr3 (271-432)||(28155171-28155341)
chr3 (297-435)||(51999178-51999324)
chr3 (309-435)||(6832382-6832516)
chr3 (297-435)||(42560887-42561032)
chr3 (320-435)||(50176029-50176149)
chr3 (298-432)||(30692365-30692497)
chr3 (297-435)||(36178646-36178791)
chr3 (309-435)||(50734014-50734147)
chr3 (309-435)||(50778708-50778841)
chr3 (319-435)||(7521080-7521202)
chr3 (356-432)||(44995263-44995345)
chr3 (318-384)||(46123933-46124000)
chr3 (320-435)||(51304347-51304469)
chr3 (390-435)||(48886928-48886973)
chr3 (297-435)||(10426373-10426518)
chr3 (297-435)||(35472582-35472713)
chr3 (283-426)||(38572105-38572255)
chr3 (391-435)||(26550078-26550122)
chr3 (396-435)||(7008105-7008144)
chr3 (396-435)||(21225274-21225313)
chr3 (390-435)||(51973550-51973595)
chr3 (317-376)||(37183844-37183904)
chr3 (283-348)||(31170261-31170326)
chr3 (390-435)||(42258413-42258458)
chr3 (390-435)||(46137106-46137151)
chr3 (320-360)||(744225-744265)
chr3 (320-352)||(53722116-53722148)
[»] chr8 (44 HSPs)
chr8 (271-435)||(36912375-36912545)
chr8 (273-435)||(18029442-18029610)
chr8 (271-435)||(34955609-34955778)
chr8 (273-435)||(30470761-30470929)
chr8 (298-435)||(41477168-41477311)
chr8 (303-435)||(17741702-17741840)
chr8 (283-435)||(29637098-29637256)
chr8 (316-435)||(5212294-5212419)
chr8 (296-435)||(38584837-38584982)
chr8 (316-435)||(42860717-42860842)
chr8 (316-435)||(5735290-5735415)
chr8 (318-435)||(13814952-13815075)
chr8 (298-435)||(30289673-30289818)
chr8 (271-426)||(26632105-26632266)
chr8 (283-435)||(35931832-35931990)
chr8 (297-423)||(8609935-8610068)
chr8 (298-435)||(4625437-4625580)
chr8 (296-435)||(39811001-39811147)
chr8 (296-435)||(7990414-7990559)
chr8 (296-435)||(24431809-24431951)
chr8 (306-435)||(35099428-35099564)
chr8 (283-435)||(43524333-43524492)
chr8 (283-435)||(1958122-1958281)
chr8 (283-435)||(12272424-12272583)
chr8 (298-435)||(40283460-40283604)
chr8 (317-435)||(42859929-42860054)
chr8 (318-435)||(31129444-31129569)
chr8 (283-435)||(43618291-43618449)
chr8 (316-435)||(15053635-15053761)
chr8 (316-435)||(45100967-45101093)
chr8 (285-435)||(43525031-43525188)
chr8 (298-435)||(26244482-26244626)
chr8 (317-435)||(44149874-44149999)
chr8 (318-435)||(30532393-30532516)
chr8 (360-435)||(17494497-17494578)
chr8 (318-435)||(13947371-13947495)
chr8 (320-435)||(23549720-23549842)
chr8 (317-435)||(44503171-44503296)
chr8 (304-413)||(26749373-26749488)
chr8 (315-378)||(23353189-23353252)
chr8 (390-435)||(29731778-29731823)
chr8 (390-435)||(38206956-38207001)
chr8 (321-435)||(1634783-1634904)
chr8 (285-354)||(7511887-7511955)
[»] chr5 (48 HSPs)
chr5 (270-435)||(41263319-41263490)
chr5 (273-435)||(8176246-8176414)
chr5 (273-435)||(41152949-41153117)
chr5 (316-435)||(4577008-4577133)
chr5 (283-433)||(14278799-14278955)
chr5 (314-435)||(25652814-25652941)
chr5 (316-435)||(10569753-10569878)
chr5 (314-435)||(27407687-27407816)
chr5 (271-426)||(25032311-25032472)
chr5 (318-435)||(8681231-8681354)
chr5 (314-435)||(15972568-15972695)
chr5 (271-435)||(37882374-37882542)
chr5 (332-435)||(11954796-11954905)
chr5 (317-435)||(34918421-34918543)
chr5 (283-435)||(32976519-32976677)
chr5 (283-435)||(42317858-42318016)
chr5 (306-435)||(31013786-31013922)
chr5 (283-435)||(27942461-27942620)
chr5 (283-435)||(40888864-40889023)
chr5 (298-435)||(3454721-3454864)
chr5 (283-435)||(19241286-19241445)
chr5 (273-435)||(42607986-42608155)
chr5 (298-435)||(29618956-29619100)
chr5 (284-435)||(36572362-36572520)
chr5 (297-435)||(13479766-13479911)
chr5 (317-435)||(27406984-27407110)
chr5 (283-435)||(7650973-7651132)
chr5 (316-435)||(25670848-25670974)
chr5 (298-435)||(23089503-23089647)
chr5 (317-435)||(23649110-23649235)
chr5 (317-435)||(23809336-23809461)
chr5 (297-435)||(34529325-34529469)
chr5 (316-435)||(42806942-42807068)
chr5 (298-435)||(4219387-4219527)
chr5 (295-435)||(30648052-30648202)
chr5 (316-435)||(31008327-31008453)
chr5 (271-435)||(4938143-4938313)
chr5 (394-435)||(9274424-9274465)
chr5 (308-377)||(9274457-9274525)
chr5 (318-435)||(12912875-12912999)
chr5 (298-435)||(39008465-39008609)
chr5 (316-435)||(32363557-32363683)
chr5 (390-435)||(34709961-34710005)
chr5 (390-435)||(39238498-39238543)
chr5 (309-359)||(177042-177092)
chr5 (318-382)||(39238419-39238484)
chr5 (395-435)||(177150-177190)
chr5 (395-435)||(36609398-36609437)
[»] chr2 (37 HSPs)
chr2 (273-435)||(37245463-37245631)
chr2 (298-435)||(927835-927978)
chr2 (283-435)||(6362926-6363085)
chr2 (320-435)||(31192927-31193048)
chr2 (317-435)||(38901726-38901850)
chr2 (303-435)||(9074168-9074305)
chr2 (271-432)||(30822529-30822696)
chr2 (307-435)||(31174129-31174262)
chr2 (298-435)||(5146654-5146798)
chr2 (273-432)||(12854982-12855147)
chr2 (306-435)||(39433955-39434090)
chr2 (296-416)||(1987104-1987230)
chr2 (283-435)||(1073026-1073185)
chr2 (283-431)||(14152013-14152169)
chr2 (283-435)||(24997053-24997211)
chr2 (318-435)||(36209418-36209541)
chr2 (283-435)||(4296714-4296872)
chr2 (287-435)||(13151426-13151582)
chr2 (297-435)||(22351557-22351702)
chr2 (297-435)||(43021727-43021872)
chr2 (283-435)||(8852030-8852188)
chr2 (283-435)||(7588445-7588606)
chr2 (320-435)||(36855717-36855838)
chr2 (284-435)||(9117785-9117943)
chr2 (298-435)||(39490130-39490273)
chr2 (283-435)||(44279964-44280123)
chr2 (308-435)||(1308640-1308774)
chr2 (309-435)||(14382965-14383098)
chr2 (298-384)||(17485804-17485891)
chr2 (283-435)||(17929198-17929357)
chr2 (318-435)||(7763432-7763554)
chr2 (315-383)||(2780738-2780806)
chr2 (389-435)||(16218808-16218854)
chr2 (360-423)||(43495672-43495741)
chr2 (297-435)||(6333332-6333465)
chr2 (398-435)||(4278167-4278204)
chr2 (316-384)||(36526826-36526895)
[»] chr7 (38 HSPs)
chr7 (271-435)||(22737538-22737708)
chr7 (270-435)||(22191179-22191348)
chr7 (298-435)||(24793477-24793620)
chr7 (316-435)||(21654850-21654975)
chr7 (316-435)||(48984911-48985036)
chr7 (301-435)||(25218751-25218891)
chr7 (298-435)||(38970017-38970162)
chr7 (316-435)||(30630757-30630882)
chr7 (283-435)||(36518486-36518644)
chr7 (283-435)||(33078727-33078886)
chr7 (316-435)||(43571036-43571162)
chr7 (316-435)||(114494-114619)
chr7 (283-435)||(47159437-47159595)
chr7 (317-435)||(35193062-35193186)
chr7 (318-435)||(30720126-30720250)
chr7 (283-435)||(5813070-5813228)
chr7 (316-435)||(25038536-25038661)
chr7 (324-435)||(26013142-26013258)
chr7 (283-435)||(35029051-35029209)
chr7 (316-435)||(39769733-39769859)
chr7 (283-435)||(37887818-37887977)
chr7 (320-435)||(40302433-40302555)
chr7 (309-435)||(42881355-42881488)
chr7 (273-335)||(37888513-37888575)
chr7 (284-435)||(28317986-28318143)
chr7 (298-435)||(45549561-45549705)
chr7 (283-435)||(30566571-30566730)
chr7 (320-435)||(33508467-33508590)
chr7 (296-435)||(43202079-43202228)
chr7 (318-435)||(20354229-20354353)
chr7 (298-435)||(26812099-26812244)
chr7 (283-435)||(37951718-37951879)
chr7 (320-435)||(32748805-32748927)
chr7 (298-435)||(32130212-32130357)
chr7 (395-435)||(2414695-2414735)
chr7 (317-384)||(38351584-38351652)
chr7 (360-435)||(1940614-1940695)
chr7 (390-435)||(22656752-22656797)
[»] scaffold0100 (1 HSPs)
scaffold0100 (274-435)||(30481-30648)
[»] chr1 (47 HSPs)
chr1 (271-435)||(44651030-44651199)
chr1 (316-435)||(44451213-44451338)
chr1 (301-438)||(8464085-8464228)
chr1 (298-435)||(41542313-41542454)
chr1 (302-435)||(17783364-17783503)
chr1 (316-435)||(643765-643890)
chr1 (296-435)||(44334270-44334415)
chr1 (271-435)||(45239095-45239265)
chr1 (284-432)||(3754969-3755128)
chr1 (308-435)||(36302975-36303108)
chr1 (308-435)||(48729315-48729448)
chr1 (283-435)||(2478271-2478429)
chr1 (284-435)||(8468293-8468451)
chr1 (283-435)||(27630402-27630560)
chr1 (319-435)||(52933711-52933833)
chr1 (319-435)||(52941346-52941468)
chr1 (306-432)||(44929236-44929368)
chr1 (316-435)||(45456093-45456219)
chr1 (283-435)||(31468102-31468260)
chr1 (297-435)||(48388050-48388195)
chr1 (283-435)||(37420286-37420444)
chr1 (283-435)||(36230325-36230484)
chr1 (332-427)||(39149093-39149190)
chr1 (317-435)||(20584794-20584918)
chr1 (309-435)||(31159381-31159514)
chr1 (309-435)||(19578851-19578985)
chr1 (318-435)||(48404333-48404457)
chr1 (270-435)||(51494414-51494586)
chr1 (297-435)||(40500382-40500525)
chr1 (316-435)||(30878485-30878612)
chr1 (298-435)||(29523686-29523830)
chr1 (318-435)||(37646502-37646626)
chr1 (316-435)||(23092770-23092896)
chr1 (317-435)||(37822571-37822697)
chr1 (309-435)||(45623472-45623605)
chr1 (317-435)||(37691232-37691357)
chr1 (309-435)||(29919364-29919498)
chr1 (318-435)||(14096694-14096818)
chr1 (390-435)||(17681203-17681248)
chr1 (308-384)||(35847120-35847197)
chr1 (285-435)||(43738950-43739107)
chr1 (316-435)||(33164413-33164539)
chr1 (390-435)||(45362789-45362834)
chr1 (319-386)||(51520221-51520289)
chr1 (390-433)||(51156832-51156875)
chr1 (390-435)||(10266902-10266947)
chr1 (390-434)||(47300440-47300484)
[»] chr4 (54 HSPs)
chr4 (308-432)||(39049029-39049159)
chr4 (320-435)||(31848717-31848838)
chr4 (283-435)||(39113698-39113856)
chr4 (273-435)||(47750169-47750335)
chr4 (316-432)||(53184042-53184164)
chr4 (283-435)||(23540368-23540527)
chr4 (308-435)||(54356839-54356972)
chr4 (304-435)||(10089840-10089976)
chr4 (306-435)||(19409125-19409260)
chr4 (302-435)||(40596705-40596844)
chr4 (308-435)||(12158134-12158267)
chr4 (283-435)||(34199211-34199370)
chr4 (316-435)||(39533224-39533349)
chr4 (283-435)||(3618396-3618554)
chr4 (283-435)||(33077816-33077974)
chr4 (284-435)||(40721007-40721165)
chr4 (283-435)||(48506548-48506707)
chr4 (283-435)||(6290571-6290730)
chr4 (283-435)||(28899303-28899462)
chr4 (283-435)||(46917453-46917611)
chr4 (304-435)||(2215224-2215362)
chr4 (297-435)||(3533249-3533394)
chr4 (306-435)||(33526711-33526846)
chr4 (296-435)||(51392215-51392358)
chr4 (296-435)||(55859-56003)
chr4 (295-435)||(8991766-8991913)
chr4 (317-435)||(55408511-55408636)
chr4 (316-435)||(33604661-33604787)
chr4 (298-435)||(45081353-45081498)
chr4 (314-435)||(53348003-53348131)
chr4 (283-435)||(56053988-56054146)
chr4 (334-435)||(36656580-36656687)
chr4 (309-435)||(55560421-55560554)
chr4 (316-432)||(38173559-38173682)
chr4 (284-435)||(16020819-16020977)
chr4 (270-347)||(35394874-35394951)
chr4 (298-435)||(48403841-48403986)
chr4 (317-433)||(18469312-18469435)
chr4 (296-435)||(34564108-34564253)
chr4 (291-435)||(16174957-16175108)
chr4 (298-435)||(13094332-13094476)
chr4 (316-435)||(13110565-13110691)
chr4 (298-435)||(35809149-35809293)
chr4 (273-435)||(23389870-23390040)
chr4 (318-435)||(34463966-34464089)
chr4 (318-435)||(52017350-52017476)
chr4 (390-435)||(27863800-27863845)
chr4 (309-435)||(33523267-33523401)
chr4 (316-430)||(4981513-4981634)
chr4 (318-435)||(19272789-19272913)
chr4 (390-435)||(27142272-27142317)
chr4 (390-435)||(52772838-52772883)
chr4 (298-435)||(17329854-17329998)
chr4 (284-384)||(31336353-31336454)
[»] scaffold0012 (1 HSPs)
scaffold0012 (298-435)||(124001-124142)
[»] chr6 (24 HSPs)
chr6 (303-435)||(6380432-6380569)
chr6 (304-425)||(29428471-29428598)
chr6 (283-435)||(8669860-8670018)
chr6 (271-432)||(631477-631644)
chr6 (283-435)||(34838551-34838709)
chr6 (316-435)||(6725567-6725693)
chr6 (283-435)||(34328252-34328410)
chr6 (309-435)||(10883868-10884001)
chr6 (283-435)||(197775-197933)
chr6 (296-438)||(22627819-22627968)
chr6 (316-435)||(24348436-24348562)
chr6 (283-435)||(30446214-30446373)
chr6 (314-435)||(12512914-12513042)
chr6 (283-435)||(17961206-17961364)
chr6 (316-435)||(12501835-12501961)
chr6 (332-433)||(8218964-8219072)
chr6 (320-435)||(32359753-32359875)
chr6 (291-384)||(8660537-8660631)
chr6 (318-435)||(26654278-26654402)
chr6 (318-435)||(26760248-26760372)
chr6 (309-376)||(12480313-12480381)
chr6 (390-432)||(34242390-34242432)
chr6 (390-435)||(2503309-2503354)
chr6 (308-435)||(24933224-24933359)
[»] scaffold0362 (1 HSPs)
scaffold0362 (316-435)||(5265-5391)
[»] scaffold0054 (2 HSPs)
scaffold0054 (295-435)||(57685-57832)
scaffold0054 (314-435)||(55069-55189)
[»] scaffold0016 (1 HSPs)
scaffold0016 (318-435)||(66014-66138)
[»] scaffold0007 (1 HSPs)
scaffold0007 (395-427)||(170570-170602)


Alignment Details
Target: chr3 (Bit Score: 125; Significance: 3e-64; HSPs: 72)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 125; E-Value: 3e-64
Query Start/End: Original strand, 303 - 435
Target Start/End: Original strand, 50017045 - 50017177
Alignment:
Q  303 caccattcaaaatccactttttcaatttccaacactctacatcattttctctttcttattcaacactcattcaacttttacccttggtttttcattcaac 402  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  50017045 caccattcaaaatccactttttcaattcccaacactctacatcattttctctttcttattcaacactcattcaacttttacccttgatttttcattcaac 50017144  T
Q  403 actctaccccaccactttttatttcttattctt 435  Q
    |||||||||||||||||||||||||||||||||    
T  50017145 actctaccccaccactttttatttcttattctt 50017177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 271 - 435
Target Start/End: Complemental strand, 46573038 - 46572868
Alignment:
Q  271 taagaccatccccaatggttaaacacattcaacaccattcaaaatccactttttcaatttccaacactctacatcattttctctttcttattcaacactc 370  Q
    ||||||||||  ||||||| ||| |||||||||| ||||||| | |||||||||||||| ||||||||| |||||||||||||| |||||||||| ||||    
T  46573038 taagaccatctacaatggtgaaaaacattcaacaacattcaacacccactttttcaattcccaacactccacatcattttctctctcttattcaagactc 46572939  T
Q  371 attcaacttttaccct------tggtttttcattcaacactctaccccaccactttttatttcttattctt 435  Q
    ||||||||||||||||      | ||||||||||||||||||||||||||||||||||||||| |||||||    
T  46572938 attcaacttttaccctctccaatagtttttcattcaacactctaccccaccactttttatttcatattctt 46572868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 296 - 435
Target Start/End: Original strand, 41890520 - 41890664
Alignment:
Q  296 cattcaacaccattcaaaatccactttttcaatttccaacactctacatcattttctctttcttattcaacactcattcaacttttaccct------tgg 389  Q
    ||||||||||||||||| ||| |||||||||||| ||||||||| |||||||||||||| |||||||||||||||||||||||||||||||      |||    
T  41890520 cattcaacaccattcaacatc-actttttcaattcccaacactccacatcattttctctctcttattcaacactcattcaacttttaccctctccaatgg 41890618  T
Q  390 tttttcattcaacactctaccccaccactttttatttcttattctt 435  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||    
T  41890619 tttttcattcaacactctaccccaccactttttattttttattctt 41890664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 298 - 435
Target Start/End: Original strand, 42601748 - 42601891
Alignment:
Q  298 ttcaacaccattcaaaatccactttttcaatttccaacactctacatcattttctctttcttattcaacactcattcaacttttaccct------tggtt 391  Q
    ||||||||||||||| | |||||||||||||| ||||||||| |||||||||||||| ||||||||||||||||||||||||||||| |      |||||    
T  42601748 ttcaacaccattcaacacccactttttcaattcccaacactccacatcattttctctctcttattcaacactcattcaacttttaccttctccaatggtt 42601847  T
Q  392 tttcattcaacactctaccccaccactttttatttcttattctt 435  Q
    |||||||||||||||||||| |||||||||||||||||||||||    
T  42601848 tttcattcaacactctaccctaccactttttatttcttattctt 42601891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 304 - 432
Target Start/End: Complemental strand, 49823250 - 49823116
Alignment:
Q  304 accattcaaaatccactttttcaatttccaacactctacatcattttctctttcttattcaacactcattcaacttttaccct------tggtttttcat 397  Q
    ||||||||||  |||||||||||||| ||||||||| |||||||||||||| ||||||||||||||||||||||||||||| |      |||||||||||    
T  49823250 accattcaaacaccactttttcaattcccaacactccacatcattttctctctcttattcaacactcattcaacttttaccatctccaatggtttttcat 49823151  T
Q  398 tcaacactctaccccaccactttttatttcttatt 432  Q
    |||||||||||||||||||||||||||||||||||    
T  49823150 tcaacactctaccccaccactttttatttcttatt 49823116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 296 - 435
Target Start/End: Complemental strand, 25832811 - 25832667
Alignment:
Q  296 cattcaacaccattcaaaatccactttttcaatttccaacactctacatcattttctctttcttattcaacactcattcaacttttaccc------ttgg 389  Q
    ||||||||||||||||| | |||||||||||||| ||||||||  |||||||||||||| ||||||||||||||||||||||||||||||       |||    
T  25832811 cattcaacaccattcaaca-ccactttttcaattcccaacacttcacatcattttctctctcttattcaacactcattcaacttttaccccctccaatgg 25832713  T
Q  390 tttttcattcaacactctaccccaccactttttatttcttattctt 435  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||    
T  25832712 tttttcattcaacactctaccccaccactttttattttttattctt 25832667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 301 - 435
Target Start/End: Original strand, 50033657 - 50033797
Alignment:
Q  301 aacaccattcaaaatccactttttcaatttccaacactctacatcattttctctttcttattcaacactcattcaacttttaccct------tggttttt 394  Q
    |||||||||||| ||||||||||| ||||||||||| ||||||||||||| ||| |||||||||||||||||||||||||||| ||      || |||||    
T  50033657 aacaccattcaacatccacttttttaatttccaacattctacatcattttttctctcttattcaacactcattcaacttttactctctccaatgattttt 50033756  T
Q  395 cattcaacactctaccccaccactttttatttcttattctt 435  Q
    ||||||||||| |||||||||||||||||||||||||||||    
T  50033757 cattcaacactataccccaccactttttatttcttattctt 50033797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 84; E-Value: 9e-40
Query Start/End: Original strand, 303 - 435
Target Start/End: Complemental strand, 42601585 - 42601448
Alignment:
Q  303 caccattcaaaatccactttttcaatttccaacactctacatcattttctctttcttattcaacactcattcaacttttaccct------tggtttttca 396  Q
    |||||||||| | |||||||||||||| ||||||||| |||||||||||||| |||||||||||||||||||||||||||||||      ||||||||||    
T  42601585 caccattcaaca-ccactttttcaattcccaacactccacatcattttctctctcttattcaacactcattcaacttttaccctctccaatggtttttca 42601487  T
Q  397 ttcaacactctaccccaccactttttatttcttattctt 435  Q
    |||||||||||||||||||| ||||||||| ||||||||    
T  42601486 ttcaacactctaccccaccattttttattttttattctt 42601448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 316 - 435
Target Start/End: Original strand, 51427105 - 51427230
Alignment:
Q  316 ccactttttcaatttccaacactctacatcattttctctttcttattcaacactcattcaacttttaccct------tggtttttcattcaacactctac 409  Q
    |||||||||||||| ||||||||| |||||||||||||| ||||||||||||||||||||||||||||| |      ||||||||||||||||||| |||    
T  51427105 ccactttttcaattcccaacactccacatcattttctctctcttattcaacactcattcaacttttaccatctccaatggtttttcattcaacactttac 51427204  T
Q  410 cccaccactttttatttcttattctt 435  Q
    ||||||||||||||||||||||||||    
T  51427205 cccaccactttttatttcttattctt 51427230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 271 - 435
Target Start/End: Complemental strand, 37410522 - 37410362
Alignment:
Q  271 taagaccatccccaatggttaaacacattcaacaccattcaaaatccactttttcaatttccaacactctacatcattttctctttcttattcaacactc 370  Q
    |||||||||||| ||||||| |||| ||||||||||||          ||||||||||| |||| |||| |||||||||||||| |||||||||||| ||    
T  37410522 taagaccatccctaatggttcaacatattcaacaccat----------ctttttcaattcccaatactccacatcattttctctctcttattcaacattc 37410433  T
Q  371 attcaacttttaccct------tggtttttcattcaacactctaccccaccactttttatttcttattctt 435  Q
    ||||||||||||||||      |||||||||||||||||||||||||||||||||||||||||||||||||    
T  37410432 attcaacttttaccctctccaatggtttttcattcaacactctaccccaccactttttatttcttattctt 37410362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 306 - 435
Target Start/End: Complemental strand, 35424087 - 35423952
Alignment:
Q  306 cattcaaaatccactttttcaatttccaacactctacatcattttctctttcttattcaacactcattcaacttttaccct------tggtttttcattc 399  Q
    ||||||| ||||| |||||||||| ||||||||| |||||||||| ||| ||||||||||||||||||| |||||||||||      |||||||||||||    
T  35424087 cattcaacatccattttttcaattcccaacactccacatcattttttctctcttattcaacactcattcgacttttaccctctcaaatggtttttcattc 35423988  T
Q  400 aacactctaccccaccactttttatttcttattctt 435  Q
    |||||| ||||||||||||||| |||||||||||||    
T  35423987 aacactttaccccaccacttttgatttcttattctt 35423952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 268 - 435
Target Start/End: Complemental strand, 25450740 - 25450577
Alignment:
Q  268 atttaagaccatccccaatggttaaacacattcaacaccattcaaaatccactttttcaatttccaacactctacatcattttctctttcttattcaaca 367  Q
    |||| |||||||||||||||||| |||||||||||||||          || |||||||||| ||||| ||| |||||||||||||| ||||||||||||    
T  25450740 attttagaccatccccaatggttcaacacattcaacacc----------cattttttcaattcccaacgctccacatcattttctctctcttattcaaca 25450651  T
Q  368 ctcattcaacttttaccct------tggtttttcattcaacactctaccccaccactttttatttcttattctt 435  Q
     |||||||||||||| |||      | |||||||||||||||||||||||||||||||||||||||||||||||    
T  25450650 ttcattcaacttttatcctctccaatagtttttcattcaacactctaccccaccactttttatttcttattctt 25450577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 316 - 435
Target Start/End: Original strand, 33934996 - 33935120
Alignment:
Q  316 ccactttttcaatttccaacactctacatcattttctctttcttattcaacactcattcaacttttaccct------tggtttttcattcaacactctac 409  Q
    |||||||||||||| ||||||||| |||||||||||||| |||||||||||||||| ||||||||||||||      ||| |||||||||||||||||||    
T  33934996 ccactttttcaattcccaacactccacatcattttctctctcttattcaacactcaatcaacttttaccctctccaatgg-ttttcattcaacactctac 33935094  T
Q  410 cccaccactttttatttcttattctt 435  Q
    ||||||||||||||||| ||||||||    
T  33935095 cccaccactttttattttttattctt 33935120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 308 - 435
Target Start/End: Complemental strand, 49147364 - 49147231
Alignment:
Q  308 ttcaaaatccactttttcaatttccaacactctacatcattttctctttcttattcaacactcattcaacttttaccct------tggtttttcattcaa 401  Q
    ||||| ||| |||||||||||| ||||||||| |||||||||||||| ||||||||||||||||||||||||||||| |      || ||||||||||||    
T  49147364 ttcaacatctactttttcaattcccaacactccacatcattttctctctcttattcaacactcattcaacttttacctttttcaatgatttttcattcaa 49147265  T
Q  402 cactctaccccaccactttttatttcttattctt 435  Q
    ||| | ||||||||||||||||||||||||||||    
T  49147264 cacccaaccccaccactttttatttcttattctt 49147231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 271 - 432
Target Start/End: Complemental strand, 25790887 - 25790720
Alignment:
Q  271 taagaccatccccaatggttaaacacattcaacaccattcaaaatccactttttcaatttccaacactctacatcattttctctttctt-attcaacact 369  Q
    ||||||||||  ||||||||||||||| | || ||||||||| | |||||||||||||| ||||||||| |||||||||||||| |||| ||||||||||    
T  25790887 taagaccatctacaatggttaaacacaat-aataccattcaacacccactttttcaattcccaacactccacatcattttctctctcttcattcaacact 25790789  T
Q  370 cattcaacttttacc-ct----tgg-tttttcattcaacactctaccccaccactttttatttcttatt 432  Q
    ||||||| ||||||| ||    ||| ||||||||||||||| |||||||||||| ||||||||||||||    
T  25790788 cattcaatttttacctctccaatggttttttcattcaacaccctaccccaccaccttttatttcttatt 25790720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 283 - 435
Target Start/End: Original strand, 43473862 - 43474016
Alignment:
Q  283 caatggttaaacacattcaacaccattcaaaatccactttttcaatttccaacactctacatcattttctctttctt-attcaacactcattcaactttt 381  Q
    ||||||||||||| |||||||| |  |||| |||||||||||||||| |||||| || | |||||||||||| |||| ||||||||| ||||||| ||||    
T  43473862 caatggttaaacatattcaacaaccctcaacatccactttttcaattcccaacattccagatcattttctctctcttaattcaacacccattcaattttt 43473961  T
Q  382 acc-cttggtttttcattcaacactctaccccaccactttttatttcttattctt 435  Q
    ||| |||  |||||||||||||| ||| ||||||||| |||||||||||||||||    
T  43473962 acctcttcatttttcattcaacattctcccccaccaccttttatttcttattctt 43474016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 283 - 435
Target Start/End: Complemental strand, 50415931 - 50415772
Alignment:
Q  283 caatggttaaacacattcaacaccattcaaaatccactttttcaatttccaacactctacatcattttctctttctt-attcaacactcattcaactttt 381  Q
    ||||||| ||| |||||||||| | ||||| | |||||||||||||||||||||||| |||||||||||||| |||| ||||||||| ||||||| ||||    
T  50415931 caatggtaaaatacattcaacaaccttcaacacccactttttcaatttccaacactccacatcattttctctctcttaattcaacacccattcaattttt 50415832  T
Q  382 acc-ct----tgg-tttttcattcaacactctaccccaccactttttatttcttattctt 435  Q
    ||| ||    ||| ||||||||||||||| |||||||||||| |||||||||||||||||    
T  50415831 acctctccaatggttttttcattcaacaccctaccccaccaccttttatttcttattctt 50415772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 273 - 435
Target Start/End: Original strand, 20139322 - 20139492
Alignment:
Q  273 agaccatccccaatggttaaacacattcaacaccattcaaaatccactttttcaatttccaacactctacatcattttctctttctt-attcaacactca 371  Q
    ||||||||  |||||||||||  ||||||||| || |||| | ||||||||||||||  |||||||  |||||||||||||| |||| ||||||||||||    
T  20139322 agaccatctacaatggttaaaaccattcaacaacactcaatacccactttttcaattctcaacacttcacatcattttctctctcttaattcaacactca 20139421  T
Q  372 ttcaacttttaccct------tgg-tttttcattcaacactctaccccaccactttttatttcttattctt 435  Q
    ||||||||||||| |      ||| |||||||||||||||||||||||||||  |||||||||||||||||    
T  20139422 ttcaacttttaccttctccaatggttttttcattcaacactctaccccaccatcttttatttcttattctt 20139492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 301 - 435
Target Start/End: Complemental strand, 33795575 - 33795438
Alignment:
Q  301 aacaccattcaaaatccactttttcaatttccaacactctacatcattttctctttcttattcaacactcattcaacttttaccct------tggttttt 394  Q
    |||||||||||| ||||||||||| |||| |||||| ||    |||||||||||||||||||||||||||||||||||||||| ||      | ||||||    
T  33795575 aacaccattcaacatccacttttttaattcccaacaatcc---tcattttctctttcttattcaacactcattcaacttttactctcttcaatagttttt 33795479  T
Q  395 cattcaacactctaccccaccactttttatttcttattctt 435  Q
    |||||||||||||||| ||||| ||||||||||||||||||    
T  33795478 cattcaacactctaccgcaccattttttatttcttattctt 33795438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 343 - 435
Target Start/End: Complemental strand, 49357538 - 49357440
Alignment:
Q  343 atcattttctctttcttattcaacactcattcaacttttaccct------tggtttttcattcaacactctaccccaccactttttatttcttattctt 435  Q
    |||||||||||| |||||||||||||||||||||||||||||||      ||||||||||||||| |||||||||||||||||||||||||||||||||    
T  49357538 atcattttctctctcttattcaacactcattcaacttttaccctctccaatggtttttcattcaatactctaccccaccactttttatttcttattctt 49357440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 308 - 435
Target Start/End: Complemental strand, 49407413 - 49407280
Alignment:
Q  308 ttcaaaatccactttttcaatttccaacactctacatcattttctctttcttattcaacactcattcaacttttaccct------tggtttttcattcaa 401  Q
    ||||| |||||||||||||||||| ||||||  || | ||||||||| | |||||||| |||||||||||||||||| |      |||||||||||||||    
T  49407413 ttcaacatccactttttcaatttcgaacacttcaccttattttctctcttttattcaatactcattcaacttttaccttcttcaatggtttttcattcaa 49407314  T
Q  402 cactctaccccaccactttttatttcttattctt 435  Q
    ||| ||||||||||||||||||||||||||||||    
T  49407313 caccctaccccaccactttttatttcttattctt 49407280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 283 - 443
Target Start/End: Original strand, 138947 - 139115
Alignment:
Q  283 caatggttaaacacattcaacaccattcaaaatccactttttcaatttccaacactctacatcattttctctttctt-attcaacactcattcaactttt 381  Q
    |||||||||||  ||||||||| || |||| |||| ||||||||||| ||||||||| |||||||||| ||| |||| ||||||||||||||||||||||    
T  138947 caatggttaaaaccattcaacaacactcaacatccgctttttcaattcccaacactccacatcattttgtctctcttaattcaacactcattcaactttt 139046  T
Q  382 accct------tg-gtttttcattcaacactctaccccaccactttttatttcttattcttgttaatta 443  Q
    |||||      ||  ||||| |||||||||||||||||||||| ||||||||||| || || |||||||    
T  139047 accctctccaatgattttttaattcaacactctaccccaccaccttttatttcttcttattcttaatta 139115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 283 - 435
Target Start/End: Complemental strand, 30418530 - 30418372
Alignment:
Q  283 caatggttaaacacattcaacaccattcaaaatccactttttcaatttccaacactctacatcattttctctttctt-attcaacactcattcaactttt 381  Q
    ||||||| ||| |||||||| | | ||||| | |||||||||||||| ||||||||| |||||||||||||| |||| ||||||||| ||||||| ||||    
T  30418530 caatggtaaaatacattcaataaccttcaacacccactttttcaattcccaacactccacatcattttctctctcttaattcaacacccattcaattttt 30418431  T
Q  382 acc-ct----tggtttttcattcaacactctaccccaccactttttatttcttattctt 435  Q
    ||| ||    |||||||| ||||||||| |||||||||||| |||||||||||||||||    
T  30418430 acctctccaatggttttttattcaacaccctaccccaccaccttttatttcttattctt 30418372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 283 - 435
Target Start/End: Original strand, 29701654 - 29701813
Alignment:
Q  283 caatggttaaacacattcaacaccattcaaaatccactttttcaatttccaacactctacatcattttctctttctt-attcaacactcattcaactttt 381  Q
    ||||||| ||| |||||||||| | ||||| | |||||||||||||| ||||||||| |||||||||||||| |||| ||||||||| ||||||| ||||    
T  29701654 caatggtaaaatacattcaacaaccttcaacacccactttttcaattcccaacactccacatcattttctctctcttaattcaacacccattcaattttt 29701753  T
Q  382 accc------ttggtttttcattcaacactctaccccaccactttttatttcttattctt 435  Q
    ||||      | | ||||||||||||||| |||| ||||||| |||||||||||||||||    
T  29701754 acccctccaatggttttttcattcaacaccctactccaccaccttttatttcttattctt 29701813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 316 - 435
Target Start/End: Complemental strand, 35853260 - 35853134
Alignment:
Q  316 ccactttttcaatttccaacactctacatcattttctctttcttattcaacactcattcaacttttac-----cc--ttggtttttcattcaacactcta 408  Q
    ||||||||||  || ||||||||| |||||||||||||| ||||||||||||||||||||||||||||     ||  | | |||||||||||||||||||    
T  35853260 ccactttttctcttcccaacactccacatcattttctctctcttattcaacactcattcaacttttactatctccaatggttttttcattcaacactcta 35853161  T
Q  409 ccccaccactttttatttcttattctt 435  Q
    ||||||||||||||||||| |||||||    
T  35853160 ccccaccactttttatttcatattctt 35853134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 316 - 435
Target Start/End: Complemental strand, 49710457 - 49710331
Alignment:
Q  316 ccactttttcaatttccaacactctacatcattttctctttcttattcaacactcattcaacttttac-----cc--ttggtttttcattcaacactcta 408  Q
    ||||||||||  || ||||||||| |||||||||||||| ||||||||||||||||||||||||||||     ||  | | |||||||||||||||||||    
T  49710457 ccactttttctcttcccaacactccacatcattttctctctcttattcaacactcattcaacttttactatctccaatggttttttcattcaacactcta 49710358  T
Q  409 ccccaccactttttatttcttattctt 435  Q
    ||||||||||||||||||| |||||||    
T  49710357 ccccaccactttttatttcatattctt 49710331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 283 - 435
Target Start/End: Original strand, 17466488 - 17466646
Alignment:
Q  283 caatggttaaacacattcaacaccattcaaaatccactttttcaatttccaacactctacatcattttctctttctt-attcaacactcattcaactttt 381  Q
    |||||||| |||||| | || ||||||||| | |||||||||||||| ||||||||| |||||||||||||| |||| ||||||||| ||||||| ||||    
T  17466488 caatggttcaacacaat-aataccattcaacacccactttttcaattcccaacactccacatcattttctctctcttaattcaacacccattcaattttt 17466586  T
Q  382 acc-ct----tgg-tttttcattcaacactctaccccaccactttttatttcttattctt 435  Q
    ||| ||    ||| ||||||||||||||| |||||||||||| |||||||||||||||||    
T  17466587 acctctccaatggttttttcattcaacaccctaccccaccaccttttatttcttattctt 17466646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 309 - 435
Target Start/End: Original strand, 27847407 - 27847540
Alignment:
Q  309 tcaaaatccactttttcaatttccaacactctacatcattttctctttctt-attcaacactcattcaacttttacc-ctt-----ggtttttcattcaa 401  Q
    |||| |||||||||||||||||||||||||| |||||||||||||| |||| ||||||||| |||| || ||||||| |||     | ||||||||||||    
T  27847407 tcaacatccactttttcaatttccaacactccacatcattttctctctcttaattcaacacccatttaatttttacctcttcaatggttttttcattcaa 27847506  T
Q  402 cactctaccccaccactttttatttcttattctt 435  Q
    ||| |||||||||||| |||||||||||||||||    
T  27847507 caccctaccccaccaccttttatttcttattctt 27847540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 320 - 426
Target Start/End: Original strand, 33748694 - 33748806
Alignment:
Q  320 tttttcaatttccaacactctacatcattttctctttcttattcaacactcattcaacttttaccct------tggtttttcattcaacactctacccca 413  Q
    |||||||||||||||||||| |||||||||||||| | ||| ||||||||||||||||||||||| |      |||||||||||||||||||||| ||||    
T  33748694 tttttcaatttccaacactccacatcattttctctcttttactcaacactcattcaacttttaccttctccaatggtttttcattcaacactctatccca 33748793  T
Q  414 ccactttttattt 426  Q
    ||| |||||||||    
T  33748794 ccattttttattt 33748806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 297 - 435
Target Start/End: Complemental strand, 6048783 - 6048638
Alignment:
Q  297 attcaacaccattcaaaatccactttttcaatttccaacactctacatcattttctctttctt-attcaacactcattcaacttttacc-ct----tgg- 389  Q
    |||||||| | ||||| | |||||||||||||| ||||||||| |||||||||||||| |||| ||||||||| ||||||| ||||||| ||    |||     
T  6048783 attcaacaaccttcaacacccactttttcaattcccaacactccacatcattttctctctcttaattcaacacccattcaatttttacctctccaatggt 6048684  T
Q  390 tttttcattcaacactctaccccaccactttttatttcttattctt 435  Q
    ||||||||||||||| |||||||||||| |||||||||||||||||    
T  6048683 tttttcattcaacaccctaccccaccaccttttatttcttattctt 6048638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 319 - 435
Target Start/End: Complemental strand, 15493885 - 15493765
Alignment:
Q  319 ctttttcaatttccaacactctacatcattttctctttcttattcaacactcattcaacttttaccct------tggtttttcattcaacactctacccc 412  Q
    ||||||||||| ||||||||| |||||| |||||||  ||||||||||| |||||||||||||||| |      || |||||||||||||||||||||||    
T  15493885 ctttttcaattcccaacactccacatcactttctct--cttattcaacattcattcaacttttaccatctccaatgatttttcattcaacactctacccc 15493788  T
Q  413 accactttttatttcttattctt 435  Q
    ||||| |||||||||||||||||    
T  15493787 accaccttttatttcttattctt 15493765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 283 - 435
Target Start/End: Original strand, 47144146 - 47144304
Alignment:
Q  283 caatggttaaacacattcaacaccattcaaaatccactttttcaatttccaacactctacatcattttctctttctt-attcaacactcattcaactttt 381  Q
    |||||||| |||||| | || ||||||||| | |||||||||||||| ||||||||| |||||||||||||| |||| |||||||||| |||||| ||||    
T  47144146 caatggttcaacacaat-aataccattcaacacccactttttcaattcccaacactccacatcattttctctctcttaattcaacacttattcaattttt 47144244  T
Q  382 acc------cttggtttttcattcaacactctaccccaccactttttatttcttattctt 435  Q
    |||       | | ||||||||||||||| |||||||||||| |||||||||||||||||    
T  47144245 acctctccaatagttttttcattcaacaccctaccccaccaccttttatttcttattctt 47144304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 283 - 435
Target Start/End: Complemental strand, 5845240 - 5845082
Alignment:
Q  283 caatggttaaacacattcaacaccattcaaaatccactttttcaatttccaacactctacatcattttctctttctt-attcaacactcattcaactttt 381  Q
    |||||||| |||||| | || ||||||||| | |||||||||||||| ||||||||| |||||||||| ||| |||| ||||||||||||||||| ||||    
T  5845240 caatggttcaacacaat-aataccattcaacacccactttttcaattcccaacactccacatcattttatctctcttaattcaacactcattcaattttt 5845142  T
Q  382 ac----cc--ttggtttttcattcaacactctaccccaccactttttatttcttattctt 435  Q
    ||    ||  | | ||||||||||||||| |||||||||||| |||||||||||||||||    
T  5845141 acatctccaatggttttttcattcaacaccctaccccaccaccttttatttcttattctt 5845082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 316 - 435
Target Start/End: Original strand, 43022653 - 43022779
Alignment:
Q  316 ccactttttcaatttccaacactctacatcattttctctttcttattcaacactcattcaacttttac--cctt-----ggtttttcattcaacactcta 408  Q
    ||||||||||  || ||||||||| |||||||||||||| ||||||||||||||||||||||||||||   |||     | |||||||||||||||||||    
T  43022653 ccactttttctcttcccaacactccacatcattttctctctcttattcaacactcattcaacttttactatcttcaatggttttttcattcaacactcta 43022752  T
Q  409 ccccaccactttttatttcttattctt 435  Q
    |||||||| |||||||||| |||||||    
T  43022753 ccccaccaatttttatttcatattctt 43022779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 283 - 435
Target Start/End: Complemental strand, 47701164 - 47701005
Alignment:
Q  283 caatggttaaacacattcaacaccattcaaaatccactttttcaatttccaacactctacatca-ttttctctttcttattcaacactcattcaactttt 381  Q
    |||||||||||  || |||||| || |||| | ||||||||||||||  |||||||| |||||| |||| ||| |||||||||||||||||| |||||||    
T  47701164 caatggttaaaaccaatcaacaacactcaacacccactttttcaattctcaacactccacatcatttttttctctcttattcaacactcattaaactttt 47701065  T
Q  382 ac-----ccttgg-tttttcattcaacactctaccccaccactttttatttcttattctt 435  Q
    ||     || ||| |||||| ||||||||||||||||||||||||||||||| |||||||    
T  47701064 actctctccatggttttttctttcaacactctaccccaccactttttatttcatattctt 47701005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 283 - 435
Target Start/End: Original strand, 12974640 - 12974800
Alignment:
Q  283 caatggttaaacacattcaacaccattcaaaatccactttttcaatttccaacactctacatcattttctctttctt-attcaacactcattcaactttt 381  Q
    ||||||||||| |  ||||| ||| ||||| | |||||||||||||| ||||||||| |||||||||||||| |||| ||||||||| ||||||  ||||    
T  12974640 caatggttaaaaattttcaatacccttcaacacccactttttcaattcccaacactccacatcattttctctctcttaattcaacacccattcatttttt 12974739  T
Q  382 accct------tgg-tttttcattcaacactctaccccaccactttttatttcttattctt 435  Q
      |||      ||| |||||||||||||||||||||||||||| |||||||||||||||||    
T  12974740 tacctctccaatggttttttcattcaacactctaccccaccaccttttatttcttattctt 12974800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 283 - 435
Target Start/End: Original strand, 4045952 - 4046111
Alignment:
Q  283 caatggttaaacacattcaacaccattcaaaatccactttttcaatttccaacactctacatcattttctctttctt-attcaacactcattcaactttt 381  Q
    ||||||| || || |||||||| | ||||| |||||||||||||||| ||||||||| |||||||||||||| |||| ||||||||| | || || ||||    
T  4045952 caatggtaaatcaaattcaacaaccttcaacatccactttttcaattcccaacactccacatcattttctctctcttaattcaacacccttttaattttt 4046051  T
Q  382 acc------cttggtttttcattcaacactctaccccaccactttttatttcttattctt 435  Q
    |||       | | ||||||||||||||| |||||||||||| |||||||||||||||||    
T  4046052 acctctccaatagctttttcattcaacaccctaccccaccaccttttatttcttattctt 4046111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 298 - 435
Target Start/End: Original strand, 11908006 - 11908150
Alignment:
Q  298 ttcaacaccattcaaaatccactttttcaatttccaacactctacatcattttctctttc-ttattcaacactcattcaacttttacc-ctt-----ggt 390  Q
    ||||| ||| ||||| | |||||||||||||||||||||||| |||||||||| ||| || | ||||||||| ||||||| ||||||| |||     | |    
T  11908006 ttcaatacccttcaacacccactttttcaatttccaacactccacatcattttttctctcataattcaacacccattcaatttttacctcttcaatggtt 11908105  T
Q  391 ttttcattcaacactctaccccaccactttttatttcttattctt 435  Q
    |||||||||||||| |||||||||||| |||||||||||||||||    
T  11908106 ttttcattcaacaccctaccccaccaccttttatttcttattctt 11908150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 283 - 435
Target Start/End: Complemental strand, 32120539 - 32120380
Alignment:
Q  283 caatggttaaacacattcaacaccattcaaaatccactttttcaatttccaacactctacatcattttctctttctt-attcaacactcattcaactttt 381  Q
    ||||||| ||||| |||||||| | ||||| | |||||||||||||| ||||||||| |||||||||||||| |||| ||||||||| | ||||| ||||    
T  32120539 caatggtaaaacaaattcaacaaccttcaacacccactttttcaattcccaacactccacatcattttctctctcttaattcaacaccctttcaattttt 32120440  T
Q  382 acc------cttggtttttcattcaacactctaccccaccactttttatttcttattctt 435  Q
    |||       | | ||||||||||||||| |||||||||||  |||||||||||||||||    
T  32120439 acctctccaatagttttttcattcaacaccctaccccaccatattttatttcttattctt 32120380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 298 - 435
Target Start/End: Complemental strand, 26165640 - 26165496
Alignment:
Q  298 ttcaacaccattcaaaatccactttttcaatttccaacactctacatcattttctctttc-ttattcaacactcattcaacttttacc-ct----tgg-t 390  Q
    ||||| ||| ||||| |||||||||||||||| ||||||||| |||||||||||||| || | ||||||||| ||||||| ||||||| ||    ||| |    
T  26165640 ttcaatacccttcaacatccactttttcaattcccaacactccacatcattttctctctcataattcaacacccattcaatttttacctctccaatggtt 26165541  T
Q  391 ttttcattcaacactctaccccaccactttttatttcttattctt 435  Q
    ||||||||||| || |||||||||||| |||||||||||||||||    
T  26165540 ttttcattcaaaaccctaccccaccaccttttatttcttattctt 26165496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 316 - 435
Target Start/End: Original strand, 28410399 - 28410525
Alignment:
Q  316 ccactttttcaatttccaacactctacatcattttctctttcttattcaacactcattcaacttttaccct------tggtttt-tcattcaacactcta 408  Q
    ||||||||||  || ||||||||| || ||||||||||| | ||||||||||||||||||||||||||| |      || |||| |||||||||||||||    
T  28410399 ccactttttctcttcccaacactccacgtcattttctctcttttattcaacactcattcaacttttaccatctccaatgattttttcattcaacactcta 28410498  T
Q  409 ccccaccactttttatttcttattctt 435  Q
    ||||||||||||||||||| |||||||    
T  28410499 ccccaccactttttatttcatattctt 28410525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 316 - 435
Target Start/End: Original strand, 41183279 - 41183405
Alignment:
Q  316 ccactttttcaatttccaacactctacatcattttctctttctt-attcaacactcattcaacttttacc-ct----tgg-tttttcattcaacactcta 408  Q
    |||||||||||||| ||||||||| |||||||||||||| |||| ||||||||| ||| ||| ||||||| ||    ||| ||||||||||||||| |||    
T  41183279 ccactttttcaattcccaacactccacatcattttctctctcttaattcaacacccatacaatttttacctctccaatggttttttcattcaacacccta 41183378  T
Q  409 ccccaccactttttatttcttattctt 435  Q
    ||||||||| |||||||||||||||||    
T  41183379 ccccaccaccttttatttcttattctt 41183405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 283 - 435
Target Start/End: Original strand, 44084281 - 44084439
Alignment:
Q  283 caatggttaaacacattcaacaccattcaaaatccactttttcaatttccaacactctacatcattttctctttctt-attcaacactcattcaactttt 381  Q
    ||||||| ||||| |||||||| | ||||| | |||||||||||||| ||||||||| |||||||||||||| |||| ||||||||| | ||||| ||||    
T  44084281 caatggtaaaacaaattcaacaaccttcaacacccactttttcaattcccaacactccacatcattttctctctcttaattcaacaccctttcaattttt 44084380  T
Q  382 acc------cttggtttttcattcaacactctaccccaccactttttatttcttattctt 435  Q
    |||       | | ||||||||||||||| |||||||||||  |||||||||||||||||    
T  44084381 acctctccaatagttttttcattcaacac-ctaccccaccatattttatttcttattctt 44084439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 283 - 435
Target Start/End: Original strand, 55026711 - 55026870
Alignment:
Q  283 caatggttaaacacattcaacaccattcaaaatccactttttcaatttccaacactctacatcattttctctttctta-ttcaacactcattcaactttt 381  Q
    ||||||| ||| | |||||||| |  |||| | ||| ||||||||||| |||||||  || ||||||||||| ||||| |||||||||||||||| ||||    
T  55026711 caatggtaaaataaattcaacaaccctcaacacccattttttcaattttcaacacttcacttcattttctctctcttaattcaacactcattcaattttt 55026810  T
Q  382 acc-ct----tggtttt-tcattcaacactctaccccaccactttttatttcttattctt 435  Q
    ||| ||    ||||||| |||||||||| ||||||||||||| |||||||||||||||||    
T  55026811 acctctccaatggttttttcattcaacattctaccccaccaccttttatttcttattctt 55026870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 283 - 370
Target Start/End: Original strand, 7008027 - 7008115
Alignment:
Q  283 caatggttaaacacattcaacaccattcaaaatccactttttcaatttccaacactctacatcattttctctttctt-attcaacactc 370  Q
    ||||||| ||||| |||||||| |  |||| | ||||||||||||||||||||||||||||||||||||||| |||| |||||||||||    
T  7008027 caatggtaaaacaaattcaacaaccctcaacacccactttttcaatttccaacactctacatcattttctctctcttaattcaacactc 7008115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 271 - 432
Target Start/End: Complemental strand, 28155341 - 28155171
Alignment:
Q  271 taagaccatccccaatggttaaacacattcaacaccattcaaaatccactttttcaatttccaacactctacatcattttctctttc-ttattcaacact 369  Q
    ||||||||| | ||||||| ||| |  ||||| ||| ||||| | |||||||||||||||| |||||||||||| ||||||||| || | ||||||||||    
T  28155341 taagaccattctcaatggtaaaaaaatttcaatacccttcaacacccactttttcaatttctaacactctacataattttctctctcataattcaacact 28155242  T
Q  370 cattcaactttt-------acccttgg-tttttcattcaacactctaccccaccactttttatttcttatt 432  Q
    ||||||| ||||        ||  ||| ||||||| |||||||||||||||||||| ||||||||||||||    
T  28155241 cattcaatttttttgcctctccaatggttttttcagtcaacactctaccccaccaccttttatttcttatt 28155171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 297 - 435
Target Start/End: Complemental strand, 51999324 - 51999178
Alignment:
Q  297 attcaacaccattcaaaatccactttttcaatttccaacactctacatcattttctctttctt-attcaacactcattcaacttttacc-------cttg 388  Q
    |||||||| | ||||| | |||||||||||||| ||||||||| |||||||||||||| |||| ||||||||| ||||||| ||||| |        | |    
T  51999324 attcaacaaccttcaacacccactttttcaattcccaacactccacatcattttctctctcttaattcaacacccattcaatttttatctctccaaatag 51999225  T
Q  389 gtttttcattcaacactctaccccaccactttttatttcttattctt 435  Q
     ||||||||||||||| |||||||||||  |||||||||||||||||    
T  51999224 ttttttcattcaacaccctaccccaccatattttatttcttattctt 51999178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 309 - 435
Target Start/End: Original strand, 6832382 - 6832516
Alignment:
Q  309 tcaaaatccactttttcaatttccaacactctacatcattttctct-ttcttattcaacactcattcaactttta-----cccttgg-tttttcattcaa 401  Q
    |||| |||||||||||||||| ||||||||| |||||||||||| | || | ||||||||||||||||| |||||     ||  ||| ||||||||||||    
T  6832382 tcaacatccactttttcaattcccaacactccacatcattttctttcttttaattcaacactcattcaatttttatctctccaatggttttttcattcaa 6832481  T
Q  402 cactctaccccaccacttttta-tttcttattctt 435  Q
    || ||||||||||||| ||||| ||||||||||||    
T  6832482 cattctaccccaccaccttttattttcttattctt 6832516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 297 - 435
Target Start/End: Original strand, 42560887 - 42561032
Alignment:
Q  297 attcaacaccattcaaaatccactttttcaatttccaacactctacatcattttctctttctta-ttcaacactcattcaacttttaccctt------gg 389  Q
    |||||||| | ||||| | |||||||||||||| |||||| || |||||||||||||| ||||| |||||||| | ||||| ||||| |  |      |     
T  42560887 attcaacaaccttcaacacccactttttcaattcccaacattccacatcattttctctctcttaattcaacaccctttcaatttttaactctccaatagt 42560986  T
Q  390 tttttcattcaacactctaccccaccactttttatttcttattctt 435  Q
    ||||||||||||||| |||||||||||| |||||||||||||||||    
T  42560987 tttttcattcaacaccctaccccaccaccttttatttcttattctt 42561032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 320 - 435
Target Start/End: Complemental strand, 50176149 - 50176029
Alignment:
Q  320 tttttcaatttccaacactctacatcattttctctttcttattcaacactcattcaacttttac------ccttggtttttcattcaacactctacccca 413  Q
    |||||||||| ||||||||| |||||||||| ||| ||||||||||| |  |||||||||||||      |  ||||||||||||||| | |||||||||    
T  50176149 tttttcaattcccaacactccacatcattttatctctcttattcaacgcatattcaacttttactttcttcgatggtttttcattcaata-tctacccca 50176051  T
Q  414 ccactttttatttcttattctt 435  Q
    |||| |||||||||||||||||    
T  50176050 ccaccttttatttcttattctt 50176029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 298 - 432
Target Start/End: Complemental strand, 30692497 - 30692365
Alignment:
Q  298 ttcaacaccattcaaaatccactttttcaatttccaacactctacatcattttctctttcttattcaacactcattcaacttttaccct------tggtt 391  Q
    ||||||||||||||| || || |||||||||||| ||||||| |||||||||||||| ||||||     ||||||||||| ||||||||      |||||    
T  30692497 ttcaacaccattcaatattcattttttcaatttc-aacactcaacatcattttctctctcttat-----actcattcaac-tttaccctctctaatggtt 30692405  T
Q  392 tttcattcaacactctaccccaccactttttatttcttatt 432  Q
    ||||||| ||||| |||| ||||||||||||||||||||||    
T  30692404 tttcatt-aacaccctacaccaccactttttatttcttatt 30692365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 297 - 435
Target Start/End: Complemental strand, 36178791 - 36178646
Alignment:
Q  297 attcaacaccattcaaaatccactttttcaatttccaacactctacatcattttctctttctta-ttcaacactcattcaacttttacc-ct----tggt 390  Q
    |||||||||| ||||| | |||||||||||||| ||||||||  | |||||||||||| || || |||||||  ||||||| ||||||| ||    ||||    
T  36178791 attcaacacccttcaacacccactttttcaattcccaacacttcaaatcattttctctctcataattcaacatccattcaatttttacctctccaatggt 36178692  T
Q  391 tttt-cattcaacactctaccccaccactttttatttcttattctt 435  Q
    |||| |||||||||| |||||||||| | |||||||||||||||||    
T  36178691 tttttcattcaacaccctaccccacctccttttatttcttattctt 36178646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 309 - 435
Target Start/End: Original strand, 50734014 - 50734147
Alignment:
Q  309 tcaaaatccactttttcaatttccaacactctacatcattttctctttctt-attcaacactcattcaacttttacc-ct----tgg-tttttcattcaa 401  Q
    |||| ||||||||||||||||||||| |||| |||||||||||||| |||| |||||| ||  |||||| ||||||| ||    ||| ||||||||||||    
T  50734014 tcaacatccactttttcaatttccaaaactccacatcattttctctctcttaattcaatacctattcaatttttacctctccaatggttttttcattcaa 50734113  T
Q  402 cactctaccccaccactttttatttcttattctt 435  Q
    ||  |||||||||||  |||||||||||||||||    
T  50734114 catcctaccccaccatattttatttcttattctt 50734147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 309 - 435
Target Start/End: Complemental strand, 50778841 - 50778708
Alignment:
Q  309 tcaaaatccactttttcaatttccaacactctacatcattttctctttctt-attcaacactcattcaacttttacc-ct----tgg-tttttcattcaa 401  Q
    |||| ||||||||||||||||||||| |||| |||||||||||||| |||| |||||| ||  |||||| ||||||| ||    ||| ||||||||||||    
T  50778841 tcaacatccactttttcaatttccaaaactccacatcattttctctctcttaattcaatacctattcaatttttacctctccaatggttttttcattcaa 50778742  T
Q  402 cactctaccccaccactttttatttcttattctt 435  Q
    ||  |||||||||||  |||||||||||||||||    
T  50778741 catcctaccccaccatattttatttcttattctt 50778708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 319 - 435
Target Start/End: Complemental strand, 7521202 - 7521080
Alignment:
Q  319 ctttttcaatttccaacactctacatcattttctctttcttattcaacactcattcaacttttaccct------tggtttttcattcaacactctacccc 412  Q
    ||||||||||||||||||||  | |||||||||||| ||||||||||||||||||||||   |||  |      |||||| |||||||||| || |||||    
T  7521202 ctttttcaatttccaacacttcagatcattttctctctcttattcaacactcattcaacaaatacattctttaatggtttatcattcaacaatcaacccc 7521103  T
Q  413 accactttttatttcttattctt 435  Q
    ||||| ||||||||| |||||||    
T  7521102 accacgttttatttcatattctt 7521080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 356 - 432
Target Start/End: Original strand, 44995263 - 44995345
Alignment:
Q  356 tcttattcaacactcattcaacttttaccct------tggtttttcattcaacactctaccccaccactttttatttcttatt 432  Q
    ||||||| |||| ||||||||||||||||||      ||||||||||||||||||| ||| ||||||||||||||||||||||    
T  44995263 tcttatttaacattcattcaacttttaccctcagcaatggtttttcattcaacactttactccaccactttttatttcttatt 44995345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 318 - 384
Target Start/End: Original strand, 46123933 - 46124000
Alignment:
Q  318 actttttcaatttccaacactctacatcattttctctttc-ttattcaacactcattcaacttttacc 384  Q
    ||||||||||||||||||| ||||||||||||||||| || | ||||||||||||||||| |||||||    
T  46123933 actttttcaatttccaacattctacatcattttctctctcataattcaacactcattcaatttttacc 46124000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 320 - 435
Target Start/End: Original strand, 51304347 - 51304469
Alignment:
Q  320 tttttcaatttccaacactctacatcattttctctttctta-ttcaacactcattcaacttttaccctt------ggtttttcattcaacactctacccc 412  Q
    ||||||||||| |||||||| || ||||||||||| || || |||||||| ||||||| |||||||  |      | ||||||||||||||||||||||     
T  51304347 tttttcaattttcaacactccacgtcattttctctatcataattcaacacccattcaatttttacctctccaatagttttttcattcaacactctaccct 51304446  T
Q  413 accactttttatttcttattctt 435  Q
    ||||| |||||||||||||||||    
T  51304447 accaccttttatttcttattctt 51304469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 390 - 435
Target Start/End: Complemental strand, 48886973 - 48886928
Alignment:
Q  390 tttttcattcaacactctaccccaccactttttatttcttattctt 435  Q
    |||||||||||||||||||||||||||| |||||||||||||||||    
T  48886973 tttttcattcaacactctaccccaccaccttttatttcttattctt 48886928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 297 - 435
Target Start/End: Complemental strand, 10426518 - 10426373
Alignment:
Q  297 attcaacaccattcaaaatccactttttcaatttccaacactctacatcattttctctttctta-ttcaacactcattcaacttttacc-ct----tggt 390  Q
    |||||||| | ||||| | ||| |||||||||| ||||||||| |||||||||||||| | ||| || || || ||||||| ||||||| ||    || |    
T  10426518 attcaacaaccttcaacacccattttttcaattcccaacactccacatcattttctctcttttaatttaatacccattcaatttttacctctccaatgat 10426419  T
Q  391 tttt-cattcaacactctaccccaccactttttatttcttattctt 435  Q
    |||| |||||||||| |||||||||||| |||||||||||||||||    
T  10426418 tttttcattcaacaccctaccccaccaccttttatttcttattctt 10426373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 297 - 435
Target Start/End: Complemental strand, 35472713 - 35472582
Alignment:
Q  297 attcaacaccattcaaaatccactttttcaatttccaacactctacatcattttctctttctta-ttcaacactcattcaacttttacccttggttttt- 394  Q
    |||||| ||| ||||| |||||||||||||||| ||||||||| |||| ||||||||| || || |||||||  |||| ||         |||||||||     
T  35472713 attcaatacccttcaacatccactttttcaattcccaacactccacattattttctctctcataattcaacatccatttaa---------ttggtttttt 35472623  T
Q  395 cattcaacactctaccccaccactttttatttcttattctt 435  Q
    |||||||||| |||||||||||| |||||||||||||||||    
T  35472622 cattcaacaccctaccccaccaccttttatttcttattctt 35472582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 283 - 426
Target Start/End: Complemental strand, 38572255 - 38572105
Alignment:
Q  283 caatggttaaacacattcaacaccattcaaaatccactttttcaatttccaacactctacatcattttctctttctta-ttcaacactcattcaactttt 381  Q
    ||||||| ||||| |||||||| |  |||| | | ||||||||||||  |||||||| |||| ||||||||| ||||| |||||||   |||||| ||||    
T  38572255 caatggtaaaacaaattcaacaaccctcaatacctactttttcaattctcaacactccacattattttctctctcttaattcaacatctattcaattttt 38572156  T
Q  382 acc-ct----tggttttt-cattcaacactctaccccaccactttttattt 426  Q
    ||| ||    |||||||| ||||||||||||||||||||||| ||||||||    
T  38572155 acctctccaatggttttttcattcaacactctaccccaccaccttttattt 38572105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 391 - 435
Target Start/End: Complemental strand, 26550122 - 26550078
Alignment:
Q  391 ttttcattcaacactctaccccaccactttttatttcttattctt 435  Q
    ||||||||||||||||||| ||||||| |||||||||||||||||    
T  26550122 ttttcattcaacactctactccaccaccttttatttcttattctt 26550078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 396 - 435
Target Start/End: Original strand, 7008105 - 7008144
Alignment:
Q  396 attcaacactctaccccaccactttttatttcttattctt 435  Q
    |||||||||||||||||||||| |||||||||||||||||    
T  7008105 attcaacactctaccccaccaccttttatttcttattctt 7008144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 396 - 435
Target Start/End: Original strand, 21225274 - 21225313
Alignment:
Q  396 attcaacactctaccccaccactttttatttcttattctt 435  Q
    |||||||||||||||||||||||||||||||| |||||||    
T  21225274 attcaacactctaccccaccactttttatttcatattctt 21225313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 390 - 435
Target Start/End: Original strand, 51973550 - 51973595
Alignment:
Q  390 tttttcattcaacactctaccccaccactttttatttcttattctt 435  Q
    ||||| |||||||||||||| ||||||||||||||||| |||||||    
T  51973550 ttttttattcaacactctactccaccactttttatttcatattctt 51973595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 317 - 376
Target Start/End: Complemental strand, 37183904 - 37183844
Alignment:
Q  317 cactttttcaatttccaacactctacatcattttctctttctt-attcaacactcattcaa 376  Q
    ||||||||||||| | ||||||| |||||||||||||| |||| ||||||||| |||||||    
T  37183904 cactttttcaattcctaacactccacatcattttctctctcttaattcaacacccattcaa 37183844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 283 - 348
Target Start/End: Complemental strand, 31170326 - 31170261
Alignment:
Q  283 caatggttaaacacattcaacaccattcaaaatccactttttcaatttccaacactctacatcatt 348  Q
    ||||||||||| |  ||||| ||| ||||| | ||| |||||||||| ||||||||||||||||||    
T  31170326 caatggttaaaaaatttcaatacccttcaacacccattttttcaattcccaacactctacatcatt 31170261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 390 - 435
Target Start/End: Original strand, 42258413 - 42258458
Alignment:
Q  390 tttttcattcaacactctaccccaccactttttatttcttattctt 435  Q
    ||||||||||||||||||||||||| | |||||||| | |||||||    
T  42258413 tttttcattcaacactctaccccactattttttattccatattctt 42258458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 390 - 435
Target Start/End: Complemental strand, 46137151 - 46137106
Alignment:
Q  390 tttttcattcaacactctaccccaccactttttatttcttattctt 435  Q
    ||||||||| |||||||||||| || || |||||||||||||||||    
T  46137151 tttttcatttaacactctacccaactaccttttatttcttattctt 46137106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 320 - 360
Target Start/End: Original strand, 744225 - 744265
Alignment:
Q  320 tttttcaatttccaacactctacatcattttctctttctta 360  Q
    |||||||||| ||||||||| |||||||||||||| |||||    
T  744225 tttttcaattaccaacactccacatcattttctctctctta 744265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 320 - 352
Target Start/End: Original strand, 53722116 - 53722148
Alignment:
Q  320 tttttcaatttccaacactctacatcattttct 352  Q
    |||||||||||||||||||| ||||||||||||    
T  53722116 tttttcaatttccaacactccacatcattttct 53722148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 124; Significance: 1e-63; HSPs: 44)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 271 - 435
Target Start/End: Original strand, 36912375 - 36912545
Alignment:
Q  271 taagaccatccccaatggttaaacacattcaacaccattcaaaatccactttttcaatttccaacactctacatcattttctctttcttattcaacactc 370  Q
    |||||||||||||||||||| |||| |||||||||||||||| | |||||||||||||| |||||||||||||||||||||||| |||||||||||||||    
T  36912375 taagaccatccccaatggttcaacatattcaacaccattcaacacccactttttcaattcccaacactctacatcattttctctctcttattcaacactc 36912474  T
Q  371 attcaacttttaccct------tggtttttcattcaacactctaccccaccactttttatttcttattctt 435  Q
    ||||||||||||||||      |||||||||||||||||||||||||||||||||||||||||||||||||    
T  36912475 attcaacttttaccctctccaatggtttttcattcaacactctaccccaccactttttatttcttattctt 36912545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 273 - 435
Target Start/End: Complemental strand, 18029610 - 18029442
Alignment:
Q  273 agaccatccccaatggttaaacacattcaacaccattcaaaatccactttttcaatttccaacactctacatcattttctctttcttattcaacactcat 372  Q
    |||||||| ||||||||| ||||||||||||||||||| | | |||||||||||||| ||||||||| |||||||||||||| |||||||||||||||||    
T  18029610 agaccatctccaatggttcaacacattcaacaccattcgacacccactttttcaattcccaacactccacatcattttctctctcttattcaacactcat 18029511  T
Q  373 tcaacttttaccct------tggtttttcattcaacactctaccccaccactttttatttcttattctt 435  Q
    ||||||||||||||      |||||||||||||||||||||||||||||||||||||||||||||||||    
T  18029510 tcaacttttaccctctccaatggtttttcattcaacactctaccccaccactttttatttcttattctt 18029442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 271 - 435
Target Start/End: Complemental strand, 34955778 - 34955609
Alignment:
Q  271 taagaccatccccaatggttaaacacattcaacaccattcaaaatccactttttcaatttccaacactctacatcattttctctttcttattcaacactc 370  Q
    ||||||||||||||||||||     | ||||||||||||||| | |||||||||||||| ||||||||| |||||||||||||| |||||||||||||||    
T  34955778 taagaccatccccaatggtttttttctttcaacaccattcaaca-ccactttttcaattcccaacactccacatcattttctctctcttattcaacactc 34955680  T
Q  371 attcaacttttaccct------tggtttttcattcaacactctaccccaccactttttatttcttattctt 435  Q
    ||||||||||||||||      ||||||||||||||||| |||||||||||||||||||||||||||||||    
T  34955679 attcaacttttaccctctccaatggtttttcattcaacattctaccccaccactttttatttcttattctt 34955609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 273 - 435
Target Start/End: Complemental strand, 30470929 - 30470761
Alignment:
Q  273 agaccatccccaatggttaaacacattcaacaccattcaaaatccactttttcaatttccaacactctacatcattttctctttcttattcaacactcat 372  Q
    |||||||||||||||||| |   ||||||||||||||||| ||||| |||||||||| ||||||||| || ||||||||||| |||||||||||||||||    
T  30470929 agaccatccccaatggtttacaccattcaacaccattcaagatccattttttcaattcccaacactccacgtcattttctctctcttattcaacactcat 30470830  T
Q  373 tcaacttttaccct------tggtttttcattcaacactctaccccaccactttttatttcttattctt 435  Q
    ||||||||||| ||      |||||||||||||||||||||||||||||| ||||||||| ||||||||    
T  30470829 tcaacttttactctcttcaatggtttttcattcaacactctaccccaccattttttattttttattctt 30470761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 298 - 435
Target Start/End: Original strand, 41477168 - 41477311
Alignment:
Q  298 ttcaacaccattcaaaatccactttttcaatttccaacactctacatcattttctctttcttattcaacactcattcaacttttaccct------tggtt 391  Q
    ||||||||||||||| |||||||||||||||| ||||||||| || ||||||||||| ||||||||||||||||||||||||||||| |      |||||    
T  41477168 ttcaacaccattcaacatccactttttcaattcccaacactccacgtcattttctctctcttattcaacactcattcaacttttaccatctccaatggtt 41477267  T
Q  392 tttcattcaacactctaccccaccactttttatttcttattctt 435  Q
    ||||||||||||||||||||| ||||||||||||||||||||||    
T  41477268 tttcattcaacactctacccctccactttttatttcttattctt 41477311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 303 - 435
Target Start/End: Original strand, 17741702 - 17741840
Alignment:
Q  303 caccattcaaaatccactttttcaatttccaacactctacatcattttctctttcttattcaacactcattcaacttttaccct------tggtttttca 396  Q
    |||||||||| |||||||||||||||| |||| |||| |||||||||||||| |||||||||| ||||||||||||||||||||      || |||||||    
T  17741702 caccattcaacatccactttttcaattcccaagactccacatcattttctctctcttattcaatactcattcaacttttaccctctccaatgatttttca 17741801  T
Q  397 ttcaacactctaccccaccactttttatttcttattctt 435  Q
    |||||||||||||||||||||||||||||||||||||||    
T  17741802 ttcaacactctaccccaccactttttatttcttattctt 17741840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 84; E-Value: 9e-40
Query Start/End: Original strand, 283 - 435
Target Start/End: Complemental strand, 29637256 - 29637098
Alignment:
Q  283 caatggttaaacacattcaacaccattcaaaatccactttttcaatttccaacactctacatcattttctctttcttattcaacactcattcaactttta 382  Q
    ||||||| ||| |||||||||| || | || ||||| |||||||||||||||||||| |||| ||||||||||||||||| |||||||||||||||||||    
T  29637256 caatggtgaaaaacattcaacaacacttaacatccattttttcaatttccaacactccacataattttctctttcttatttaacactcattcaactttta 29637157  T
Q  383 ccct------tggtttttcattcaacactctaccccaccactttttatttcttattctt 435  Q
    ||||      | ||||||||||||||||||||||||||||| |||||||| ||||||||    
T  29637156 ccctcttcaatagtttttcattcaacactctaccccaccacattttatttattattctt 29637098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 316 - 435
Target Start/End: Original strand, 5212294 - 5212419
Alignment:
Q  316 ccactttttcaatttccaacactctacatcattttctctttcttattcaacactcattcaacttttaccct------tggtttttcattcaacactctac 409  Q
    ||||||||| |||| ||||||||| |||||||||||||| |||||||||||||||||||||||||||||||      || ||||||||||||||||||||    
T  5212294 ccacttttttaattcccaacactccacatcattttctctctcttattcaacactcattcaacttttaccctctccaatgatttttcattcaacactctac 5212393  T
Q  410 cccaccactttttatttcttattctt 435  Q
    ||||||||||||||||||||||||||    
T  5212394 cccaccactttttatttcttattctt 5212419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 296 - 435
Target Start/End: Complemental strand, 38584982 - 38584837
Alignment:
Q  296 cattcaacaccattcaaaatccactttttcaatttccaacactctacatcattttctctttcttattcaacactcattcaacttttaccc------ttgg 389  Q
    ||||||||||||||||| |  ||||||||||||| ||||||||| || ||||||||||| ||||||||||||||| ||||||||||||||       |||    
T  38584982 cattcaacaccattcaacacacactttttcaattcccaacactccacgtcattttctctctcttattcaacactcgttcaacttttacccactccaatgg 38584883  T
Q  390 tttttcattcaacactctaccccaccactttttatttcttattctt 435  Q
    |||||||||||||||| |||||||||||||||||||||||||||||    
T  38584882 tttttcattcaacactttaccccaccactttttatttcttattctt 38584837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 316 - 435
Target Start/End: Original strand, 42860717 - 42860842
Alignment:
Q  316 ccactttttcaatttccaacactctacatcattttctctttcttattcaacactcattcaacttttaccct------tggtttttcattcaacactctac 409  Q
    |||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||| |||| |||      |||||||||||||||||||| ||    
T  42860717 ccactttttcaattcccaacactccacatcattttctctttcttattcaacactcattcaacatttaacctctccaatggtttttcattcaacactccac 42860816  T
Q  410 cccaccactttttatttcttattctt 435  Q
    ||||||||||||||||||||||||||    
T  42860817 cccaccactttttatttcttattctt 42860842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 316 - 435
Target Start/End: Original strand, 5735290 - 5735415
Alignment:
Q  316 ccactttttcaatttccaacactctacatcattttctctttcttattcaacactcattcaacttttaccct------tggtttttcattcaacactctac 409  Q
    ||||||||||||||| ||| |||| |||||||||||||| ||||||||||||||||||||| |||||||||      |||||||||||||||||| ||||    
T  5735290 ccactttttcaattttcaatactcgacatcattttctctctcttattcaacactcattcaatttttaccctctccaatggtttttcattcaacaccctac 5735389  T
Q  410 cccaccactttttatttcttattctt 435  Q
    ||||||||||||||||||||||||||    
T  5735390 cccaccactttttatttcttattctt 5735415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 318 - 435
Target Start/End: Original strand, 13814952 - 13815075
Alignment:
Q  318 actttttcaatttccaacactctacatcattttctctttcttattcaacactcattcaacttttaccct------tggtttttcattcaacactctaccc 411  Q
    |||||||||||||||||||||| |||||||||||||| |||||||||||||| ||||||| ||||||||      ||||||||||||||||| |||||||    
T  13814952 actttttcaatttccaacactccacatcattttctctctcttattcaacactaattcaacatttaccctctccaatggtttttcattcaacattctaccc 13815051  T
Q  412 caccactttttatttcttattctt 435  Q
    |||||||||||||||| |||||||    
T  13815052 caccactttttatttcctattctt 13815075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 298 - 435
Target Start/End: Complemental strand, 30289818 - 30289673
Alignment:
Q  298 ttcaacaccattcaaaatccacttttt--caatttccaacactctacatcattttctctttcttattcaacactcattcaacttttaccct------tgg 389  Q
    ||||||||||||||| |||||||||||  |||||  ||||||||||||||||||||||| |||||||||| || |||||||||||||||||      | |    
T  30289818 ttcaacaccattcaatatccactttttttcaattctcaacactctacatcattttctctctcttattcaatacacattcaacttttaccctctccaattg 30289719  T
Q  390 tttttcattcaacactctaccccaccactttttatttcttattctt 435  Q
    |||||||||||||||||||||||||||  |||||||||||||||||    
T  30289718 tttttcattcaacactctaccccaccatcttttatttcttattctt 30289673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 271 - 426
Target Start/End: Complemental strand, 26632266 - 26632105
Alignment:
Q  271 taagaccatccccaatggttaaacacattcaacaccattcaaaatccactttttcaatttccaacactctacatcattttctctttcttattcaacactc 370  Q
    ||||||||||| |||||||| |   ||||||||||||||||| | |||||||||||||| ||||||| | || ||||||||||| |||||||||||||||    
T  26632266 taagaccatcctcaatggtttacaccattcaacaccattcaacacccactttttcaattcccaacacgccacgtcattttctctctcttattcaacactc 26632167  T
Q  371 attcaacttttaccct------tggtttttcattcaacactctaccccaccactttttattt 426  Q
    ||||||||||||| ||      ||||||||||||||||||||||||| | || |||||||||    
T  26632166 attcaacttttactctctccaatggtttttcattcaacactctaccctatcattttttattt 26632105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 283 - 435
Target Start/End: Original strand, 35931832 - 35931990
Alignment:
Q  283 caatggttaaacacattcaacaccattcaaaatccactttttcaatttccaacactctacatcattttctctttctt-attcaacactcattcaactttt 381  Q
    ||||||| ||||| |||||||| | ||||| |||||||||||||||||||||||||| |||||||||||||| |||| ||||||||| | ||||| ||||    
T  35931832 caatggtaaaacaaattcaacaaccttcaacatccactttttcaatttccaacactccacatcattttctctctcttaattcaacaccctttcaattttt 35931931  T
Q  382 acc-ct----tggtttttcattcaacactctaccccaccactttttatttcttattctt 435  Q
    ||| ||    | |||||||||||||||| |||||||||||| |||||||||||||||||    
T  35931932 acctctccaatagtttttcattcaacaccctaccccaccacattttatttcttattctt 35931990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 297 - 423
Target Start/End: Complemental strand, 8610068 - 8609935
Alignment:
Q  297 attcaacaccattcaaaatccactttttcaatttccaacactctacatcattttctctttcttattcaacactcattcaacttttaccct------tggt 390  Q
    |||||||||||||||| || ||||||||||||| ||||||||| | |||||||||||| | |||||||||||||||||||||||||||||      ||||    
T  8610068 attcaacaccattcaacattcactttttcaattcccaacactccatatcattttctctcttttattcaacactcattcaacttttaccctctccaatggt 8609969  T
Q  391 ttttcattcaacactcta-ccccaccacttttta 423  Q
    ||||||||||||||| || |||||||||||||||    
T  8609968 ttttcattcaacactttacccccaccacttttta 8609935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 298 - 435
Target Start/End: Complemental strand, 4625580 - 4625437
Alignment:
Q  298 ttcaacaccattcaaaatccactttttcaatttccaacactctacatcattttctctttcttattcaacactcattcaactttta------cccttggtt 391  Q
    ||||||||||||||| |  ||||||||||||| ||||||||| | || ||||||||| |||||||||||||||||||||||||||      ||  |||||    
T  4625580 ttcaacaccattcaacactcactttttcaattcccaacactccaaattattttctctctcttattcaacactcattcaacttttatcatctccaatggtt 4625481  T
Q  392 tttcattcaacactctaccccaccactttttatttcttattctt 435  Q
    |||||||||||||| ||||||||||||||||||||  |||||||    
T  4625480 tttcattcaacactataccccaccactttttattttctattctt 4625437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 296 - 435
Target Start/End: Complemental strand, 39811147 - 39811001
Alignment:
Q  296 cattcaacaccattcaaaatccactttttcaatttccaa-cactctacatcattttctctttcttattcaacactcattcaacttttaccct------tg 388  Q
    ||||||||||||||||| | |||||||||  | |||| | ||||| |||||||||| ||| |||||||||||||||||||||||||||||||      |     
T  39811147 cattcaacaccattcaacacccactttttttaattcctagcactccacatcattttatctctcttattcaacactcattcaacttttaccctctccaata 39811048  T
Q  389 gtttttcattcaacactctaccccaccactttttatttcttattctt 435  Q
    ||||||||||||||||| ||||||| |||||||||||||||||||||    
T  39811047 gtttttcattcaacactttaccccatcactttttatttcttattctt 39811001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 296 - 435
Target Start/End: Original strand, 7990414 - 7990559
Alignment:
Q  296 cattcaacaccattcaaaatccactttttcaatttccaacactctacatcattttctctttcttattcaacactcattcaacttttaccct------tgg 389  Q
    ||||||||| ||||||| | ||||| ||| ||||| |||||||| || | ||||| | | |||||||||||||||||||||||||||||||      |||    
T  7990414 cattcaacaacattcaacacccactattttaattttcaacactccacgttattttttttctcttattcaacactcattcaacttttaccctctccaatgg 7990513  T
Q  390 tttttcattcaacactctaccccaccactttttatttcttattctt 435  Q
    |||||||||||||||| |||||||||||||||||||| ||||||||    
T  7990514 tttttcattcaacactttaccccaccactttttatttattattctt 7990559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 296 - 435
Target Start/End: Complemental strand, 24431951 - 24431809
Alignment:
Q  296 cattcaacaccattcaaaatccactttttcaatttccaacactctacatcattttctctttcttattcaacactcattcaacttttaccct------tgg 389  Q
    ||||||||| ||||||| ||||||||||||||||| |||||||| | |||| ||||||  |||||||||| ||| ||||||||||||||||      ||     
T  24431951 cattcaacatcattcaacatccactttttcaattttcaacactccaaatcactttctc--tcttattcaatact-attcaacttttaccctctccaatga 24431855  T
Q  390 tttttcattcaacactctaccccaccactttttatttcttattctt 435  Q
    |||||||||||||||| ||| |||||||||||||||||||||||||    
T  24431854 tttttcattcaacactttactccaccactttttatttcttattctt 24431809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 306 - 435
Target Start/End: Original strand, 35099428 - 35099564
Alignment:
Q  306 cattcaaaatccactttttcaatttccaacactctacatcattttctctttctt-attcaacactcattcaacttttacc-ct----tg-gtttttcatt 398  Q
    ||||||| | |||||||||||||| |||||||||||||||||||||||| |||| ||||||||||||||||| ||||||| ||    ||  |||||||||    
T  35099428 cattcaacacccactttttcaattcccaacactctacatcattttctctctcttaattcaacactcattcaatttttacctctccaatgattttttcatt 35099527  T
Q  399 caacactctaccccaccactttttatttcttattctt 435  Q
    |||||| |||||||||||| |||||||||||||||||    
T  35099528 caacaccctaccccaccaccttttatttcttattctt 35099564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 283 - 435
Target Start/End: Complemental strand, 43524492 - 43524333
Alignment:
Q  283 caatggttaaacacattcaacaccattcaaaatccactttttcaatttccaacactctacatcattttctctttc-ttattcaacactcattcaactttt 381  Q
    ||||||||||| |  ||||| ||| ||||| |||||||||||||||| ||||||||| |||||||||||||| || | ||||||||||||||||| ||||    
T  43524492 caatggttaaaaaatttcaatacccttcaacatccactttttcaattcccaacactccacatcattttctctctcataattcaacactcattcaattttt 43524393  T
Q  382 acc-ct----tg-gtttttcattcaacactctaccccaccactttttatttcttattctt 435  Q
    ||| ||    ||  ||||||||||||||| |||||||||||| |||||||||||||||||    
T  43524392 acctctccaatgattttttcattcaacaccctaccccaccaccttttatttcttattctt 43524333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 283 - 435
Target Start/End: Complemental strand, 1958281 - 1958122
Alignment:
Q  283 caatggttaaacacattcaacaccattcaaaatccactttttcaatttccaacactctacatcattttctctttctt-attcaacactcattcaactttt 381  Q
    ||||||| ||| |||||||| | | ||||| | |||||||||||||| ||||||||| |||||||||||||| |||| ||||||||| ||||||| ||||    
T  1958281 caatggtaaaatacattcaataaccttcaacacccactttttcaattcccaacactccacatcattttctctctcttaattcaacacccattcaattttt 1958182  T
Q  382 acc-ct----tggtttttcattcaacactcta-ccccaccactttttatttcttattctt 435  Q
    ||| ||    |||||||| ||||||||| ||| ||||||||| |||||||||||||||||    
T  1958181 acctctccaatggttttttattcaacaccctacccccaccaccttttatttcttattctt 1958122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 283 - 435
Target Start/End: Complemental strand, 12272583 - 12272424
Alignment:
Q  283 caatggttaaacacattcaacaccattcaaaatccactttttcaatttccaacactctacatcattttctctttctt-attcaacactcattcaactttt 381  Q
    ||||||| ||| | |||||||| |  |||| ||||||||||||||||| |||||||| || ||||||||||| |||| ||||||||||||||||| ||||    
T  12272583 caatggtaaaataaattcaacaaccctcaacatccactttttcaattttcaacactccacttcattttctctctcttaattcaacactcattcaattttt 12272484  T
Q  382 acc-ct----tgg-tttttcattcaacactctaccccaccactttttatttcttattctt 435  Q
    ||| ||    ||| |||||||||||||| ||||||||||||  |||||||||||||||||    
T  12272483 acctctccaatggttttttcattcaacattctaccccaccatcttttatttcttattctt 12272424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 298 - 435
Target Start/End: Original strand, 40283460 - 40283604
Alignment:
Q  298 ttcaacaccattcaaaatccactttttcaatttccaacactctacatcattttctctttc-ttattcaacactcattcaacttttacc------cttggt 390  Q
    ||||| ||| ||||| |||||||||||||||| ||||||||| |||||||||||||| || | ||||||||| ||||||| |||||||       | | |    
T  40283460 ttcaatacctttcaacatccactttttcaattcccaacactccacatcattttctctctcataattcaacacccattcaatttttacctctccaatagtt 40283559  T
Q  391 ttttcattcaacactctaccccaccactttttatttcttattctt 435  Q
    |||||||||||||| |||||||||||| |||||||||||||||||    
T  40283560 ttttcattcaacaccctaccccaccaccttttatttcttattctt 40283604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 317 - 435
Target Start/End: Original strand, 42859929 - 42860054
Alignment:
Q  317 cactttttcaatttccaacactctacatcattttctctttctt-attcaacactcattcaacttttac----cc--ttggtttttcattcaacactctac 409  Q
    ||||||||||||| ||||||||| |||||||||||||| |||| ||||||||||||||||| ||||||    ||  | | ||||||||||||||| ||||    
T  42859929 cactttttcaattcccaacactccacatcattttctctctcttaattcaacactcattcaatttttacatctccaatggttttttcattcaacaccctac 42860028  T
Q  410 cccaccactttttatttcttattctt 435  Q
    |||||||| |||||||||||||||||    
T  42860029 cccaccaccttttatttcttattctt 42860054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 318 - 435
Target Start/End: Complemental strand, 31129569 - 31129444
Alignment:
Q  318 actttttcaatttccaacactctacatcattttctctttctta-ttcaacactcattcaacttttaccct------tggttttt-cattcaacactctac 409  Q
    ||||||||||||  |||||||| |||||||||||||| ||||| ||| |||||||||||||||||||| |      || ||||| |||||||||||||||    
T  31129569 actttttcaattctcaacactccacatcattttctctctcttaattcgacactcattcaacttttaccatctctaatgattttttcattcaacactctac 31129470  T
Q  410 cccaccactttttatttcttattctt 435  Q
    |||||||| |||||||||||||||||    
T  31129469 cccaccaccttttatttcttattctt 31129444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 283 - 435
Target Start/End: Complemental strand, 43618449 - 43618291
Alignment:
Q  283 caatggttaaacacattcaacaccattcaaaatccactttttcaatttccaacactctacatcattttctctttctt-attcaacactcattcaactttt 381  Q
    |||||||| |||||| | || ||||||||| | ||||||| |||||| ||||||||| |||||||||||||| |||| ||||||||  ||||||| ||||    
T  43618449 caatggttcaacacaat-aataccattcaacacccactttatcaattcccaacactccacatcattttctctctcttaattcaacatccattcaattttt 43618351  T
Q  382 acc-ct----tgg-tttttcattcaacactctaccccaccactttttatttcttattctt 435  Q
    ||| ||    ||| ||||||||||||||| |||||||||||| |||||||||||||||||    
T  43618350 acctctccaatggttttttcattcaacaccctaccccaccacattttatttcttattctt 43618291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 316 - 435
Target Start/End: Original strand, 15053635 - 15053761
Alignment:
Q  316 ccactttttcaatttccaacactctacatcattttctctttctt-attcaacactcattcaacttttacc-ct----tgg-tttttcattcaacactcta 408  Q
    |||||||||||||| |||||||||  ||||||||||||| |||| ||||||||| ||||||| ||||||| ||    ||| ||||||||||||||| |||    
T  15053635 ccactttttcaattcccaacactccgcatcattttctctctcttaattcaacacccattcaatttttaccactccaatggttttttcattcaacacccta 15053734  T
Q  409 ccccaccactttttatttcttattctt 435  Q
    ||||||||| |||||||||||||||||    
T  15053735 ccccaccaccttttatttcttattctt 15053761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 316 - 435
Target Start/End: Complemental strand, 45101093 - 45100967
Alignment:
Q  316 ccactttttcaatttccaacactctacatcattttctctttctt-attcaacactcattcaacttttacc-ct----tgg-tttttcattcaacactcta 408  Q
    |||||||||||||| ||||||||| |||||||||||||| |||| ||||||||| ||||||| ||||||| ||    ||| ||||||||||||||| |||    
T  45101093 ccactttttcaattcccaacactccacatcattttctctctcttaattcaacacccattcaatttttacctctccaatggttttttcattcaacacccta 45100994  T
Q  409 ccccaccactttttatttcttattctt 435  Q
    ||||||||  |||||||||||||||||    
T  45100993 ccccaccatattttatttcttattctt 45100967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 285 - 435
Target Start/End: Complemental strand, 43525188 - 43525031
Alignment:
Q  285 atggttaaacacattcaacaccattcaaaatccactttttcaatttccaacactctacatcattttctct-ttcttattcaacactcattcaacttttac 383  Q
    ||||| ||||| |||||||| |  |||| | |||||||||||||||||||||||| |||||||||||||| || | ||||||||||||||||| ||||||    
T  43525188 atggtaaaacaaattcaacaaccctcaacacccactttttcaatttccaacactccacatcattttctctcttttaattcaacactcattcaatttttac 43525089  T
Q  384 c-ct----tgg-tttttcattcaacactctaccccaccactttttatttcttattctt 435  Q
    | ||    ||| ||||||||||||||| ||||||  |||  |||||||||||||||||    
T  43525088 ctctccaatggttttttcattcaacaccctacccagccatcttttatttcttattctt 43525031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 298 - 435
Target Start/End: Original strand, 26244482 - 26244626
Alignment:
Q  298 ttcaacaccattcaaaatccactttttcaatttccaacactctacatcattttctctttc-ttattcaacactcattcaacttttacc------cttggt 390  Q
    ||||| ||| ||||| || ||||||||||||| ||||||||| |||||||||||||| || | ||||||||| ||||||| |||||||       | | |    
T  26244482 ttcaatacccttcaacattcactttttcaattcccaacactccacatcattttctctctcataattcaacacacattcaatttttacctctccaatagtt 26244581  T
Q  391 ttttcattcaacactctaccccaccactttttatttcttattctt 435  Q
    |||||||||||||| ||| |||||||| |||||||||||||||||    
T  26244582 ttttcattcaacaccctatcccaccaccttttatttcttattctt 26244626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 317 - 435
Target Start/End: Original strand, 44149874 - 44149999
Alignment:
Q  317 cactttttcaatttccaacactctacatcattttctctttctta-ttcaacactcattcaacttttacc-ct----tggtttt-tcattcaacactctac 409  Q
    |||||||| ||||||||||| || ||||||||||||||||| || ||||| || ||||||| ||||||| ||    ||||||| ||||||||||| ||||    
T  44149874 cacttttttaatttccaacattccacatcattttctctttcataattcaatacccattcaatttttacctctccaatggttttttcattcaacaccctac 44149973  T
Q  410 cccaccactttttatttcttattctt 435  Q
    |||||||| |||||||||||||||||    
T  44149974 cccaccaccttttatttcttattctt 44149999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 318 - 435
Target Start/End: Complemental strand, 30532516 - 30532393
Alignment:
Q  318 actttttcaatttccaacactctacatcattttctctttctt-attcaacactcattcaactttt-----acccttggtttttcattcaacactctaccc 411  Q
    |||||||||||| | |||||||   |||||||||||| |||| |||||||| ||||||||||||      |||  || ||||||||||||||| ||||||    
T  30532516 actttttcaattcctaacactccgtatcattttctctctctttattcaacattcattcaactttatactcaccaatgatttttcattcaacaccctaccc 30532417  T
Q  412 caccactttttatttcttattctt 435  Q
    ||||||||||||||||||||||||    
T  30532416 caccactttttatttcttattctt 30532393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 360 - 435
Target Start/End: Complemental strand, 17494578 - 17494497
Alignment:
Q  360 attcaacactcattcaacttttaccct------tggtttttcattcaacactctaccccaccactttttatttcttattctt 435  Q
    |||||||| ||||| ||||||||||||      ||||||||||||||||||||||||||||||||||||||||| |||||||    
T  17494578 attcaacaatcattgaacttttaccctctccaatggtttttcattcaacactctaccccaccactttttatttcatattctt 17494497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 318 - 435
Target Start/End: Original strand, 13947371 - 13947495
Alignment:
Q  318 actttttcaatttccaacactctacatcattttctctttctta-ttcaacactcattcaacttttacc-ct----tggtttt-tcattcaacactctacc 410  Q
    |||||||||||| ||||||||| |||||||||||| | || || |||||||| ||||||| ||||||| ||    ||||||| ||||||||||| |||||    
T  13947371 actttttcaattcccaacactccacatcattttctttctcataattcaacacccattcaatttttacctctccaatggttttttcattcaacacactacc 13947470  T
Q  411 ccaccactttttatttcttattctt 435  Q
    |||| || |||||||||||||||||    
T  13947471 ccacaacattttatttcttattctt 13947495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 320 - 435
Target Start/End: Original strand, 23549720 - 23549842
Alignment:
Q  320 tttttcaatttccaacactctacatcattttctctttctta-ttcaacactcattcaacttttacc-ct----tggtttt-tcattcaacactctacccc 412  Q
    |||||||||| ||||||||| |||  ||||||||| || || |||||||| ||||||| ||||||| ||    ||||||| ||||||||||| |||||||    
T  23549720 tttttcaattcccaacactccacactattttctctctcataattcaacacccattcaatttttacctctccaatggttttttcattcaacaccctacccc 23549819  T
Q  413 accactttttatttcttattctt 435  Q
    |||||||||||||||| ||||||    
T  23549820 accactttttatttctcattctt 23549842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 317 - 435
Target Start/End: Original strand, 44503171 - 44503296
Alignment:
Q  317 cactttttcaatttccaacactctacatcattttctctttctta-ttcaacactcattcaacttttacc-ctt-----ggtttttcattcaacactctac 409  Q
    ||||||||||||| ||||||||| || ||||||||||| ||||| || ||||| ||||||| ||||| | |||     | ||||||||||||||| ||||    
T  44503171 cactttttcaattcccaacactccacgtcattttctctctcttaattgaacacccattcaatttttatctcttcaatggttttttcattcaacaccctac 44503270  T
Q  410 cccaccactttttatttcttattctt 435  Q
    |||||||| ||||||| |||||||||    
T  44503271 cccaccaccttttattccttattctt 44503296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 304 - 413
Target Start/End: Complemental strand, 26749488 - 26749373
Alignment:
Q  304 accattcaaaatccactttttcaatttccaacactctacatcattttctctttcttattcaacactcattcaacttttaccct------tggtttttcat 397  Q
    ||||||||| | ||| ||||| ||||  |||||||| | |||||||||||  | |||||||||| ||||||||||||||||||      |||||||||||    
T  26749488 accattcaacacccatttttttaattctcaacactccatatcattttctcccttttattcaacattcattcaacttttaccctcttcaatggtttttcat 26749389  T
Q  398 tcaacactctacccca 413  Q
    |||||| |||||||||    
T  26749388 tcaacattctacccca 26749373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 315 - 378
Target Start/End: Complemental strand, 23353252 - 23353189
Alignment:
Q  315 tccactttttcaatttccaacactctacatcattttctctttcttattcaacactcattcaact 378  Q
    ||||||||||||||||||||||||| |||||  ||||||| ||||||| |||| ||||||||||    
T  23353252 tccactttttcaatttccaacactccacatccctttctctctcttatttaacattcattcaact 23353189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 390 - 435
Target Start/End: Original strand, 29731778 - 29731823
Alignment:
Q  390 tttttcattcaacactctaccccaccactttttatttcttattctt 435  Q
    ||||||||||||||| |||||||||||| |||||||||||||||||    
T  29731778 tttttcattcaacaccctaccccaccaccttttatttcttattctt 29731823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 390 - 435
Target Start/End: Complemental strand, 38207001 - 38206956
Alignment:
Q  390 tttttcattcaacactctaccccaccactttttatttcttattctt 435  Q
    ||||||||||||||| |||||||||||| |||||||||||||||||    
T  38207001 tttttcattcaacaccctaccccaccaccttttatttcttattctt 38206956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 321 - 435
Target Start/End: Complemental strand, 1634904 - 1634783
Alignment:
Q  321 ttttcaatttccaacactctacatcattttctctttctta-ttcaacactcattcaacttttacc---ct--tggtt-tttcattcaacactctacccca 413  Q
    |||||||||  |||||||| |||||||||||||| || || |||||||| ||||||  |||||||   ||  ||||| ||||||||||||| ||||| ||    
T  1634904 ttttcaattctcaacactccacatcattttctctctcataattcaacacccattcagtttttacctctctaatggttctttcattcaacaccctacctca 1634805  T
Q  414 ccactttttatttcttattctt 435  Q
    |||| |||||||||||||||||    
T  1634804 ccacattttatttcttattctt 1634783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 285 - 354
Target Start/End: Complemental strand, 7511955 - 7511887
Alignment:
Q  285 atggttaaacacattcaacaccattcaaaatccactttttcaatttccaacactctacatcattttctct 354  Q
    ||||||||| |||||||||| |  |||| ||| | ||||| |||||||||||||| ||||||||||||||    
T  7511955 atggttaaaaacattcaacaaccctcaagatc-atttttttaatttccaacactccacatcattttctct 7511887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 117; Significance: 2e-59; HSPs: 48)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 270 - 435
Target Start/End: Original strand, 41263319 - 41263490
Alignment:
Q  270 ttaagaccatccccaatggttaaacacattcaacaccattcaaaatccactttttcaatttccaacactctacatcattttctctttcttattcaacact 369  Q
    ||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||| ||||| ||| |||||||||||||| |||||||||||| |    
T  41263319 ttaagaccatccccaatggttcaacacattcaacaccattcaacatccactttttcaattcccaacgctccacatcattttctctctcttattcaacatt 41263418  T
Q  370 cattcaacttttaccct------tggtttttcattcaacactctaccccaccactttttatttcttattctt 435  Q
    |||||||||||||||||      ||||||||||||||||||| |||||||||||||||||||||||||||||    
T  41263419 cattcaacttttaccctctccaatggtttttcattcaacactataccccaccactttttatttcttattctt 41263490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 273 - 435
Target Start/End: Complemental strand, 8176414 - 8176246
Alignment:
Q  273 agaccatccccaatggttaaacacattcaacaccattcaaaatccactttttcaatttccaacactctacatcattttctctttcttattcaacactcat 372  Q
    |||||||||||||||||| ||||||||||||| ||||||| | |||||||||||||| ||||||||| |||||||||||||| |||||||||||||||||    
T  8176414 agaccatccccaatggttcaacacattcaacatcattcaacacccactttttcaattcccaacactccacatcattttctctctcttattcaacactcat 8176315  T
Q  373 tcaacttttaccct------tggtttttcattcaacactctaccccaccactttttatttcttattctt 435  Q
    ||||||||||||||      |||||||||||||||||||||||||||||| ||||||||||||||||||    
T  8176314 tcaacttttaccctctccaatggtttttcattcaacactctaccccaccattttttatttcttattctt 8176246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 273 - 435
Target Start/End: Complemental strand, 41153117 - 41152949
Alignment:
Q  273 agaccatccccaatggttaaacacattcaacaccattcaaaatccactttttcaatttccaacactctacatcattttctctttcttattcaacactcat 372  Q
    ||||||||||||||  ||||||||||||||||  |||||| ||||| ||||||||||  |||||||| |||||||||||||| |||||||||||||||||    
T  41153117 agaccatccccaattcttaaacacattcaacaatattcaacatccattttttcaattctcaacactccacatcattttctctctcttattcaacactcat 41153018  T
Q  373 tcaacttttaccct------tggtttttcattcaacactctaccccaccactttttatttcttattctt 435  Q
    |||||||||||| |      || ||||||||||||||||||||||||||||||||||||||||||||||    
T  41153017 tcaacttttaccttcttcaatgatttttcattcaacactctaccccaccactttttatttcttattctt 41152949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 316 - 435
Target Start/End: Original strand, 4577008 - 4577133
Alignment:
Q  316 ccactttttcaatttccaacactctacatcattttctctttcttattcaacactcattcaacttttaccct------tggtttttcattcaacactctac 409  Q
    |||||||||||||| ||||||||| |||||||||||||| |||||||||||||||||||||||||||||||      |||||||||||||||||||||||    
T  4577008 ccactttttcaattcccaacactccacatcattttctctctcttattcaacactcattcaacttttaccctctccaatggtttttcattcaacactctac 4577107  T
Q  410 cccaccactttttatttcttattctt 435  Q
    ||||||||||||||||| ||||||||    
T  4577108 cccaccactttttattttttattctt 4577133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 283 - 433
Target Start/End: Original strand, 14278799 - 14278955
Alignment:
Q  283 caatggttaaacacattcaacaccattcaaaatccactttttcaatttccaacactctacatcattttctctttcttattcaacactcattcaactttta 382  Q
    ||||||| ||| |||||||||| || |||| | ||| |||||||||| ||||||||| |||||||||||||| |||||||||||| ||||||||||||||    
T  14278799 caatggtgaaaaacattcaacaacactcaacacccattttttcaattcccaacactccacatcattttctctctcttattcaacattcattcaactttta 14278898  T
Q  383 ccct------tggtttttcattcaacactctaccccaccactttttatttcttattc 433  Q
    ||||      ||||||||||||||||||||||||||| ||| |||||||||||||||    
T  14278899 ccctctccaatggtttttcattcaacactctaccccatcaccttttatttcttattc 14278955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 314 - 435
Target Start/End: Original strand, 25652814 - 25652941
Alignment:
Q  314 atccactttttcaatttccaacactctacatcattttctctttcttattcaacactcattcaacttttaccct------tggtttttcattcaacactct 407  Q
    |||||||||||||||| ||||||||  |||||||||||||| |||||||||||||||||| || |||||||||      |||||||||||||||||||||    
T  25652814 atccactttttcaattcccaacacttcacatcattttctctctcttattcaacactcattgaatttttaccctctccaatggtttttcattcaacactct 25652913  T
Q  408 accccaccactttttatttcttattctt 435  Q
    ||||||||||||||||||||||||||||    
T  25652914 accccaccactttttatttcttattctt 25652941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 316 - 435
Target Start/End: Complemental strand, 10569878 - 10569753
Alignment:
Q  316 ccactttttcaatttccaacactctacatcattttctctttcttattcaacactcattcaacttttaccct------tggtttttcattcaacactctac 409  Q
    |||||||||||||| ||||||||| |||||||||| | | |||||||||||||||||||||||||||| ||      |||||||||||||||||||||||    
T  10569878 ccactttttcaattcccaacactccacatcattttttgtctcttattcaacactcattcaacttttactctctccaatggtttttcattcaacactctac 10569779  T
Q  410 cccaccactttttatttcttattctt 435  Q
    ||||||||||||||||||||||||||    
T  10569778 cccaccactttttatttcttattctt 10569753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 314 - 435
Target Start/End: Complemental strand, 27407816 - 27407687
Alignment:
Q  314 atccactttttcaatttccaacactctacatcatttt--ctctttcttattcaacactcattcaacttttaccct------tggtttttcattcaacact 405  Q
    ||||||||||||||||||||| |||| ||||||||||  |||| |||||||||||||||||||||||||||||||      |||||||||||||||||||    
T  27407816 atccactttttcaatttccaatactccacatcattttatctctctcttattcaacactcattcaacttttaccctctccaatggtttttcattcaacact 27407717  T
Q  406 ctaccccaccactttttatttcttattctt 435  Q
    |||||| ||||||||||||||| |||||||    
T  27407716 ctacccgaccactttttatttcatattctt 27407687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 271 - 426
Target Start/End: Original strand, 25032311 - 25032472
Alignment:
Q  271 taagaccatccccaatggttaaacacattcaacaccattcaaaatccactttttcaatttccaacactctacatcattttctctttcttattcaacactc 370  Q
    |||||||| ||||||| ||| |   ||||||| ||| ||||| | |||| ||||||||||||||||||| |||||||||||||| |||||||||||||||    
T  25032311 taagaccacccccaatagttcataccattcaataccgttcaacacccaccttttcaatttccaacactccacatcattttctctctcttattcaacactc 25032410  T
Q  371 attcaacttttaccct------tggtttttcattcaacactctaccccaccactttttattt 426  Q
    ||||||||||||||||      ||| ||||||||||||| |||||||||||| |||||||||    
T  25032411 attcaacttttaccctctttaatgggttttcattcaacattctaccccaccattttttattt 25032472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 318 - 435
Target Start/End: Complemental strand, 8681354 - 8681231
Alignment:
Q  318 actttttcaatttccaacactctacatcattttctctttcttattcaacactcattcaacttttaccct------tggtttttcattcaacactctaccc 411  Q
    |||||||||||||||||||||| | ||||||||||||||||||||||||| ||||||||||||||||||      ||||||||| ||||||||||||||     
T  8681354 actttttcaatttccaacactccatatcattttctctttcttattcaacattcattcaacttttaccctctccaatggtttttctttcaacactctaccg 8681255  T
Q  412 caccactttttatttcttattctt 435  Q
    ||| |||||||||||| |||||||    
T  8681254 cacaactttttatttcatattctt 8681231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 314 - 435
Target Start/End: Original strand, 15972568 - 15972695
Alignment:
Q  314 atccactttttcaatttccaacactctacatcattttctctttcttattcaacactcattcaacttttaccct------tggtttttcattcaacactct 407  Q
    ||||||||||||||||||||||| || |||| ||||||||| |||||||||||| ||||||||||||||||||      |  ||||||||||||||||||    
T  15972568 atccactttttcaatttccaacaatcgacattattttctctctcttattcaacattcattcaacttttaccctcttcaataatttttcattcaacactct 15972667  T
Q  408 accccaccactttttatttcttattctt 435  Q
    |||||||||||||||||||| |||||||    
T  15972668 accccaccactttttatttcatattctt 15972695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 271 - 435
Target Start/End: Complemental strand, 37882542 - 37882374
Alignment:
Q  271 taagaccatccccaatggttaaacacattcaacaccattcaaaatccactttttcaatttccaacactctacatcattttctctttcttattcaacactc 370  Q
    ||||||||||  ||||||| ||| |||||||||| | ||||| | ||| |||||||||| ||||||||| |||||||||| |||  |||||||||| |||    
T  37882542 taagaccatctacaatggtgaaaaacattcaacaacgttcaacacccattttttcaattcccaacactccacatcattttttct--cttattcaacgctc 37882445  T
Q  371 attcaacttttaccct------tggtttttcattcaacactctaccccaccactttttatttcttattctt 435  Q
    |||||||||||||| |      | ||||||||||||||||||| ||||||||||||||||||| |||||||    
T  37882444 attcaacttttaccatttccaatagtttttcattcaacactcttccccaccactttttatttcatattctt 37882374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 332 - 435
Target Start/End: Original strand, 11954796 - 11954905
Alignment:
Q  332 caacactctacatcattttctctttcttattcaacactcattcaacttttaccct------tggtttttcattcaacactctaccccaccactttttatt 425  Q
    |||||||| |||||||||||||| |||||||||||| |||||||||||||| |||      |||||||||||||||||||||||||||||||||||||||    
T  11954796 caacactccacatcattttctctctcttattcaacattcattcaacttttatcctcgtcaatggtttttcattcaacactctaccccaccactttttatt 11954895  T
Q  426 tcttattctt 435  Q
    ||| ||||||    
T  11954896 tctgattctt 11954905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 317 - 435
Target Start/End: Complemental strand, 34918543 - 34918421
Alignment:
Q  317 cactttttcaatttccaacactctacatcattttctctttcttattcaacactcattcaacttttaccc------ttggtttttcattcaacactctacc 410  Q
    ||||||||||||||||||||||| ||||||||||||  |||||||||||||||||||||||||||||||      ||| |||||||||||||| |||| |    
T  34918543 cactttttcaatttccaacactccacatcattttct--ttcttattcaacactcattcaacttttaccctctccattgatttttcattcaacaatctaac 34918446  T
Q  411 ccaccactttttatttcttattctt 435  Q
    ||||||  |||||||||||||||||    
T  34918445 ccaccatcttttatttcttattctt 34918421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 283 - 435
Target Start/End: Complemental strand, 32976677 - 32976519
Alignment:
Q  283 caatggttaaacacattcaacaccattcaaaatccactttttcaatttccaacactctacatcattttctctttctt-attcaacactcattcaactttt 381  Q
    ||||||| ||| |||||||| | | ||||| | |||||||||||||| ||||||||| |||||||||||||| |||| ||||||||| ||||||| ||||    
T  32976677 caatggtaaaatacattcaataaccttcaacacccactttttcaattcccaacactccacatcattttctctctcttaattcaacacccattcaattttt 32976578  T
Q  382 acc-ct----tggtttttcattcaacactctaccccaccactttttatttcttattctt 435  Q
    ||| ||    |||||||| ||||||||| |||||||||||| |||||||||||||||||    
T  32976577 acctctccaatggttttttattcaacaccctaccccaccaccttttatttcttattctt 32976519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 283 - 435
Target Start/End: Original strand, 42317858 - 42318016
Alignment:
Q  283 caatggttaaacacattcaacaccattcaaaatccactttttcaatttccaacactctacatcattttctctttctt-attcaacactcattcaactttt 381  Q
    ||||||| ||||| |||||||| | ||||| || ||||||||||||||||||||||| | |||||||||||| |||| ||||||||| | ||||| ||||    
T  42317858 caatggtaaaacaaattcaacaaccttcaacattcactttttcaatttccaacactccatatcattttctctctcttaattcaacaccctttcaattttt 42317957  T
Q  382 acc-ct----tggtttttcattcaacactctaccccaccactttttatttcttattctt 435  Q
    ||| ||    | |||||||||||||||| |||||||||||| |||||||||||||||||    
T  42317958 acctctccaatagtttttcattcaacaccctaccccaccacattttatttcttattctt 42318016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 306 - 435
Target Start/End: Complemental strand, 31013922 - 31013786
Alignment:
Q  306 cattcaaaatccactttttcaatttccaacactctacatcattttctctttctt-attcaacactcattcaacttttacc-ct----tgg-tttttcatt 398  Q
    ||||||| | |||||||||||||| ||||||||| |||||||||||||| |||| ||||||||||||||||| ||||||| ||    ||| |||||||||    
T  31013922 cattcaacacccactttttcaattcccaacactccacatcattttctctctcttaattcaacactcattcaatttttacctctccaatggttttttcatt 31013823  T
Q  399 caacactctaccccaccactttttatttcttattctt 435  Q
    |||||| |||||||||||| |||||||||||||||||    
T  31013822 caacaccctaccccaccaccttttatttcttattctt 31013786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 283 - 435
Target Start/End: Original strand, 27942461 - 27942620
Alignment:
Q  283 caatggttaaacacattcaacaccattcaaaatccactttttcaatttccaacactctacatcattttctctttctt-attcaacactcattcaactttt 381  Q
    ||||||| ||| |||||||||| | ||||| | |||||||||||||  ||||||||| |||||||||||||| |||| ||||||||| ||||||| ||||    
T  27942461 caatggtaaaatacattcaacaaccttcaacacccactttttcaatccccaacactccacatcattttctctctcttaattcaacacccattcaattttt 27942560  T
Q  382 acc-ct----tgg-tttttcattcaacactctaccccaccactttttatttcttattctt 435  Q
    ||| ||    ||| ||||||||||||||| |||||||||||| |||||||||||||||||    
T  27942561 acctctccaatggttttttcattcaacaccctaccccaccaccttttatttcttattctt 27942620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 283 - 435
Target Start/End: Original strand, 40888864 - 40889023
Alignment:
Q  283 caatggttaaacacattcaacaccattcaaaatccactttttcaatttccaacactctacatcattttctctttctt-attcaacactcattcaactttt 381  Q
    ||||||| ||| |||||||| | | ||||| | |||||||||||||| ||||||||| |||||||||||||| |||| ||||||||| ||||||| ||||    
T  40888864 caatggtaaaatacattcaataaccttcaacacccactttttcaattcccaacactccacatcattttctctctcttaattcaacacccattcaattttt 40888963  T
Q  382 acc------cttggtttttcattcaacactctaccccaccactttttatttcttattctt 435  Q
    |||       | | ||||||||||||||| |||||||||||| |||||||||||||||||    
T  40888964 acctctccaatagttttttcattcaacaccctaccccaccaccttttatttcttattctt 40889023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 298 - 435
Target Start/End: Original strand, 3454721 - 3454864
Alignment:
Q  298 ttcaacaccattcaaaatccactttttcaatttccaacactctacatcattttctctttc-ttattcaacactcattcaacttttaccct----tg-gtt 391  Q
    ||||| ||| ||||| ||||||||||||||||  |||||||| |||||||||||||| || | ||||||||||||||||| |||||| ||    ||  ||    
T  3454721 ttcaatacccttcaacatccactttttcaattctcaacactccacatcattttctctctcataattcaacactcattcaatttttactctccaatgattt 3454820  T
Q  392 tttcattcaacactctaccccaccactttttatttcttattctt 435  Q
    ||||||||||||| |||||||||||| |||||||||||||||||    
T  3454821 tttcattcaacaccctaccccaccaccttttatttcttattctt 3454864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 283 - 435
Target Start/End: Original strand, 19241286 - 19241445
Alignment:
Q  283 caatggttaaacacattcaacaccattcaaaatccactttttcaatttccaacactctacatcattttctctttctt-attcaacactcattcaactttt 381  Q
    ||||||| ||| |||||||||| | ||||| | ||||||||||||||  |||||||| |||||||||||||| |||| ||||||||| ||||||| ||||    
T  19241286 caatggtaaaatacattcaacaaccttcaacacccactttttcaattctcaacactccacatcattttctctctcttaattcaacacccattcaattttt 19241385  T
Q  382 acc-ct----tgg-tttttcattcaacactctaccccaccactttttatttcttattctt 435  Q
    ||| ||    ||| ||||||||||||||| ||||||||| || |||||||||||||||||    
T  19241386 acctctccaatggttttttcattcaacaccctaccccacaaccttttatttcttattctt 19241445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 273 - 435
Target Start/End: Complemental strand, 42608155 - 42607986
Alignment:
Q  273 agaccatccccaatggttaaacacattcaacaccattcaaaatccactttttcaatttccaacactctacatcattttctctttcttattcaacactcat 372  Q
    ||||||||  ||||||| ||| |||||||||| ||||||| ||||  ||||||||||   ||||||| || ||||||||||| | |||||||||||| ||    
T  42608155 agaccatctacaatggtgaaaaacattcaacaacattcaacatccgttttttcaattattaacactccacgtcattttctctcttttattcaacacttat 42608056  T
Q  373 tcaacttttaccct------tggtttttcattcaac-actctaccccaccactttttatttcttattctt 435  Q
    ||||||||||||||      | |||||||||||||| ||||||| ||||||| ||||||||| |||||||    
T  42608055 tcaacttttaccctttccaatagtttttcattcaacaactctacaccaccaccttttatttcatattctt 42607986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 298 - 435
Target Start/End: Complemental strand, 29619100 - 29618956
Alignment:
Q  298 ttcaacaccattcaaaatccactttttcaatttccaacactctacatcattttctctttctta-ttcaacactcattcaacttttacc-ct----tggtt 391  Q
    ||||| ||| ||||| | |||||||||||||| ||||||||| |||||||||||| | || || |||||||| ||||||| ||||||| ||    |||||    
T  29619100 ttcaatacccttcaacacccactttttcaattcccaacactccacatcattttctttctcataattcaacacccattcaatttttacctctccaatggtt 29619001  T
Q  392 ttt-cattcaacactctaccccaccactttttatttcttattctt 435  Q
    ||| |||||||||| ||||||||||||||||||||||||||||||    
T  29619000 ttttcattcaacaccctaccccaccactttttatttcttattctt 29618956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 284 - 435
Target Start/End: Complemental strand, 36572520 - 36572362
Alignment:
Q  284 aatggttaaacacattcaacaccattcaaaatccactttttcaatttccaacactctacatcattttctctttctt-attcaacactcattcaactttta 382  Q
    |||||| || || |||||||| |  |||| || |||||||||||||||||| |||| |||||||||||||| |||| ||||||||| ||||||| |||||    
T  36572520 aatggtaaatcaaattcaacaaccctcaacattcactttttcaatttccaatactccacatcattttctctctcttaattcaacacccattcaattttta 36572421  T
Q  383 -----cccttgg-tttttcattcaacactctaccccaccactttttatttcttattctt 435  Q
         ||  ||| ||||||||| |||||||||||||||||| |||||||||||||||||    
T  36572420 tttctccaatggttttttcatttaacactctaccccaccaccttttatttcttattctt 36572362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 297 - 435
Target Start/End: Complemental strand, 13479911 - 13479766
Alignment:
Q  297 attcaacaccattcaaaatccactttttcaatttccaacactctacatcattttctctttc-ttattcaacactcattcaacttttac----cc--ttgg 389  Q
    |||||| ||| ||||| | ||||||||| |||| ||||||||| |||||||||||||| || | ||||||||||||||||| ||||||    ||  | |     
T  13479911 attcaatacccttcaacacccacttttttaattcccaacactccacatcattttctctctcataattcaacactcattcaatttttacatctccaatagt 13479812  T
Q  390 tttttcattcaacactctaccccaccactttttatttcttattctt 435  Q
    ||||||||||||||| |||||||||||| |||||||||||||||||    
T  13479811 tttttcattcaacaccctaccccaccaccttttatttcttattctt 13479766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 317 - 435
Target Start/End: Complemental strand, 27407110 - 27406984
Alignment:
Q  317 cactttttcaatttccaacactctacatcattttctctttctta-ttc-aacactcattcaacttttacc-ct----tggttttt-cattcaacactcta 408  Q
    ||||||||||||| ||||||||| |||| ||||||||| ||||| ||| ||||||||||||||||||||| ||    || ||||| ||||||||||||||    
T  27407110 cactttttcaattcccaacactccacattattttctctctcttaattctaacactcattcaacttttacctctccaatgattttttcattcaacactcta 27407011  T
Q  409 ccccaccactttttatttcttattctt 435  Q
    ||||||||| |||||||||||||||||    
T  27407010 ccccaccaccttttatttcttattctt 27406984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 283 - 435
Target Start/End: Original strand, 7650973 - 7651132
Alignment:
Q  283 caatggttaaacacattcaacaccattcaaaatccactttttcaatttccaacactctacatcattttctctttctta-ttcaacactcattcaactttt 381  Q
    ||||||| ||| |||||||||| | || || | | | |||||||||| ||||||||| |||||||||||||| ||||| |||||||| |||| || ||||    
T  7650973 caatggtaaaatacattcaacaacctttaacacctattttttcaattcccaacactccacatcattttctctctcttaattcaacacccatttaattttt 7651072  T
Q  382 accctt------ggtttttcattcaacactctaccccaccactttttatttcttattctt 435  Q
    |||| |      | ||||||||||||||| |||||||||||| |||||||||||||||||    
T  7651073 acccctccaatggttttttcattcaacaccctaccccaccaccttttatttcttattctt 7651132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 316 - 435
Target Start/End: Complemental strand, 25670974 - 25670848
Alignment:
Q  316 ccactttttcaatttccaacactctacatcattttctctttc-ttattcaacactcattcaactttta-----cccttggt-ttttcattcaacactcta 408  Q
    |||||||||||||| ||||||||| |||||||||||||| || | ||||||||||||||||| |||||     ||  |||| |||||||||||||| |||    
T  25670974 ccactttttcaattcccaacactccacatcattttctctctcataattcaacactcattcaatttttaactctccaatggtgttttcattcaacacccta 25670875  T
Q  409 ccccaccactttttatttcttattctt 435  Q
     |||||||| |||||||||||||||||    
T  25670874 tcccaccaccttttatttcttattctt 25670848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 298 - 435
Target Start/End: Original strand, 23089503 - 23089647
Alignment:
Q  298 ttcaacaccattcaaaatccactttttcaatttccaacactctacatcattttctctttctta-ttcaacactcattcaacttttacc-ct----tggtt 391  Q
    ||||| ||| ||||| | ||||||||| |||| ||||||||  |||||||||||||| || || |||||||| ||||||| ||||||| ||    |||||    
T  23089503 ttcaatacccttcaacacccacttttttaattcccaacacttcacatcattttctctctcataattcaacacccattcaatttttacctctccaatggtt 23089602  T
Q  392 tt-tcattcaacactctaccccaccactttttatttcttattctt 435  Q
    || ||||||||||| |||||||||||| |||||||||||||||||    
T  23089603 ttttcattcaacaccctaccccaccaccttttatttcttattctt 23089647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 317 - 435
Target Start/End: Complemental strand, 23649235 - 23649110
Alignment:
Q  317 cactttttcaatttccaacactctacatcattttctctttctta-ttcaacactcattcaacttttacc-ctt-----ggtttttcattcaacactctac 409  Q
    ||||||||||||| ||||||||| | |||||||||||||||||| ||||||| | ||| || ||||||| |||     | ||||||||||||||| ||||    
T  23649235 cactttttcaattcccaacactccatatcattttctctttcttaattcaacatttatttaatttttacctcttcaatggttttttcattcaacaccctac 23649136  T
Q  410 cccaccactttttatttcttattctt 435  Q
    |||||||| ||| |||||||||||||    
T  23649135 cccaccacctttgatttcttattctt 23649110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 317 - 435
Target Start/End: Original strand, 23809336 - 23809461
Alignment:
Q  317 cactttttcaatttccaacactctacatcattttctctttctta-ttcaacactcattcaacttttacc-ctt-----ggtttttcattcaacactctac 409  Q
    ||||||||||||| ||||||||| | |||||||||||||||||| ||||||| | ||| || ||||||| |||     | ||||||||||||||| ||||    
T  23809336 cactttttcaattcccaacactccatatcattttctctttcttaattcaacatttatttaatttttacctcttcaatggttttttcattcaacaccctac 23809435  T
Q  410 cccaccactttttatttcttattctt 435  Q
    |||||||| ||| |||||||||||||    
T  23809436 cccaccacctttgatttcttattctt 23809461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 297 - 435
Target Start/End: Complemental strand, 34529469 - 34529325
Alignment:
Q  297 attcaacaccattcaaaatccactttttcaatttccaacactctacatcattttctctttcttattcaacactcattcaacttttaccct------tggt 390  Q
    |||||||| ||||||| | | ||||||| ||||  ||||||   |||||||||||||| | ||||| |||| ||||| |||||||| |||      ||||    
T  34529469 attcaacaacattcaacacctacttttttaattctcaacacatcacatcattttctctcttttatttaacattcatttaacttttatcctctccaatggt 34529370  T
Q  391 ttttcattcaacactctaccccaccactttttatttcttattctt 435  Q
    ||||||||||||| ||| ||||||||||||||||||| |||||||    
T  34529369 ttttcattcaacattcttccccaccactttttatttcatattctt 34529325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 316 - 435
Target Start/End: Complemental strand, 42807068 - 42806942
Alignment:
Q  316 ccactttttcaatttccaacactctacatcattttctctttctt-attcaacactcattcaacttttac-cct----tgg-tttttcattcaacactcta 408  Q
    ||||||||||||||  |||||||| |||||||||||||| |||| ||||||||| ||||||| ||||||  ||    ||| ||||||||||||||| |||    
T  42807068 ccactttttcaattctcaacactccacatcattttctctctcttaattcaacacccattcaatttttacatctctaatggttttttcattcaacacccta 42806969  T
Q  409 ccccaccactttttatttcttattctt 435  Q
    ||||||||| |||||||| ||||||||    
T  42806968 ccccaccaccttttatttattattctt 42806942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 298 - 435
Target Start/End: Complemental strand, 4219527 - 4219387
Alignment:
Q  298 ttcaacaccattcaaaatccactttttcaatttccaacactctacatcattttctctttcttattcaacactcattcaacttttacc-ct----tggttt 392  Q
    ||||| ||| ||||| | |||||||||||||| ||||||||  ||||||||||||| |    ||||||||| ||||||| ||||||| ||    ||||||    
T  4219527 ttcaatacccttcaacacccactttttcaattcccaacacttcacatcattttctcata---attcaacacccattcaatttttacctctccaatggttt 4219431  T
Q  393 tt-cattcaacactctaccccaccactttttatttcttattctt 435  Q
    || ||||||||||||||||| ||||| |||||||||||||||||    
T  4219430 tttcattcaacactctaccctaccaccttttatttcttattctt 4219387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 295 - 435
Target Start/End: Complemental strand, 30648202 - 30648052
Alignment:
Q  295 acattcaacaccattcaaaatccactttttcaatttccaacactctacatcattttctctttctt-attcaacactcattcaacttttacc-ct----tg 388  Q
    |||||||||| |  |||| | |||||||||||||| || |||||| ||| |||||| ||| |||| ||||||||||||||||| ||||||| ||    ||    
T  30648202 acattcaacaaccctcaacacccactttttcaattccctacactccacaccattttatctctcttaattcaacactcattcaatttttacctctccaatg 30648103  T
Q  389 g-tttttcattcaacactctaccccaccac---tttttatttcttattctt 435  Q
    | ||||||||||||||||||||||||||||    |||||||||||||||||    
T  30648102 gttttttcattcaacactctaccccaccacctaattttatttcttattctt 30648052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 316 - 435
Target Start/End: Complemental strand, 31008453 - 31008327
Alignment:
Q  316 ccactttttcaatttccaacactctacatcattttctctttctta-ttcaacactcattcaacttttaccctt------ggtttttcattcaacactcta 408  Q
    ||||||||||||||  |||||||  |||||||||||||| ||||| || ||||| ||||||| ||||||| ||      | ||||||||||||||  |||    
T  31008453 ccactttttcaattctcaacacttcacatcattttctctctcttaatttaacacccattcaatttttacctttccaatggttttttcattcaacatccta 31008354  T
Q  409 ccccaccactttttatttcttattctt 435  Q
    ||||||||| |||||||||||||||||    
T  31008353 ccccaccaccttttatttcttattctt 31008327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 271 - 435
Target Start/End: Original strand, 4938143 - 4938313
Alignment:
Q  271 taagaccatccccaatggttaaacacattcaacaccattcaaaatccactttttcaatttccaacactctacatcattttctctttctt-attcaacact 369  Q
    ||||||||||  | |||||||||  |||||||||  |||||| |  || ||||||||||  ||| |||| |||||||||||||| |||| ||||||||||    
T  4938143 taagaccatctacgatggttaaaatcattcaacaatattcaacactcattttttcaattctcaatactcaacatcattttctctctcttaattcaacact 4938242  T
Q  370 cattcaacttttaccct------tg-gtttttcattcaacactctaccccaccactttttatttcttattctt 435  Q
     ||||||||||||||||      ||  |||||||||||||||||||||||||  | |||||||||||| ||||    
T  4938243 aattcaacttttaccctctccaatgattttttcattcaacactctaccccac--ccttttatttcttaatctt 4938313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 394 - 435
Target Start/End: Complemental strand, 9274465 - 9274424
Alignment:
Q  394 tcattcaacactctaccccaccactttttatttcttattctt 435  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  9274465 tcattcaacactctaccccaccactttttatttcttattctt 9274424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 308 - 377
Target Start/End: Complemental strand, 9274525 - 9274457
Alignment:
Q  308 ttcaaaatccactttttcaatttccaacactctacatcattttctctttcttattcaacactcattcaac 377  Q
    ||||| |||||||||||||||| ||||||||| |||||||||| ||| ||||||| ||||||||||||||    
T  9274525 ttcaacatccactttttcaattcccaacactccacatcatttt-tctctcttatttaacactcattcaac 9274457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 318 - 435
Target Start/End: Original strand, 12912875 - 12912999
Alignment:
Q  318 actttttcaatttccaacactctacatcattttctctttcttattcaacactcattcaacttttaccct------tg-gtttttcattcaacactctacc 410  Q
    ||||||| |||| | ||||||| |||||||||| ||| ||||||| |||||||||||||||||||||||      ||  |||||| |||||||  | |||    
T  12912875 acttttttaattcctaacactccacatcattttatctctcttatttaacactcattcaacttttaccctctctaatgattttttctttcaacatcccacc 12912974  T
Q  411 ccaccactttttatttcttattctt 435  Q
    ||||||||||||||||| |||||||    
T  12912975 ccaccactttttatttcatattctt 12912999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 298 - 435
Target Start/End: Original strand, 39008465 - 39008609
Alignment:
Q  298 ttcaacaccattcaaaatccactttttcaatttccaacactctacatcattttctctttctta-ttcaacactcattcaacttttac-----ccttggtt 391  Q
    ||||| ||| ||||| |||||||||||||||| ||||||||| | ||| |||||||| || || |||||||  ||||||| ||||||     |  |||||    
T  39008465 ttcaatacccttcaacatccactttttcaattcccaacactccaaatcgttttctctctcataattcaacatccattcaatttttacatctccaatggtt 39008564  T
Q  392 tt-tcattcaacactctaccccaccactttttatttcttattctt 435  Q
    || ||||||||| | |||||||||||| |||||||||||||||||    
T  39008565 ttttcattcaacgccctaccccaccaccttttatttcttattctt 39008609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 316 - 435
Target Start/End: Complemental strand, 32363683 - 32363557
Alignment:
Q  316 ccactttttcaatttccaacactctacatcattttctctttctta-ttcaacactcattcaacttttaccctt------ggtttttcattcaacactcta 408  Q
    ||||||||| ||||| |||||||| |||| ||||||||| | ||| |||||||| |||| || |||||||  |      | |||||| ||||||||||||    
T  32363683 ccacttttttaattttcaacactccacattattttctctcttttaattcaacacccatttaatttttacctctctaatagttttttcgttcaacactcta 32363584  T
Q  409 ccccaccactttttatttcttattctt 435  Q
    | ||||||| |||||||||||||||||    
T  32363583 caccaccaccttttatttcttattctt 32363557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 390 - 435
Target Start/End: Original strand, 34709961 - 34710005
Alignment:
Q  390 tttttcattcaacactctaccccaccactttttatttcttattctt 435  Q
    ||||||||||||||||||||||||||||  ||||||||||||||||    
T  34709961 tttttcattcaacactctaccccaccac-ctttatttcttattctt 34710005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 390 - 435
Target Start/End: Original strand, 39238498 - 39238543
Alignment:
Q  390 tttttcattcaacactctaccccaccactttttatttcttattctt 435  Q
    |||||||||||||||  ||||||||||| |||||||||||||||||    
T  39238498 tttttcattcaacaccataccccaccaccttttatttcttattctt 39238543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 309 - 359
Target Start/End: Original strand, 177042 - 177092
Alignment:
Q  309 tcaaaatccactttttcaatttccaacactctacatcattttctctttctt 359  Q
    |||| ||||||||||||  |||| ||||||| |||||||||||||||||||    
T  177042 tcaacatccactttttctttttcaaacactccacatcattttctctttctt 177092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 318 - 382
Target Start/End: Original strand, 39238419 - 39238484
Alignment:
Q  318 actttttcaatttccaacactctacatcattttctctttc-ttattcaacactcattcaactttta 382  Q
    |||||||||||| ||||||||| |||||||||||||| || | ||||||||  ||||||| |||||    
T  39238419 actttttcaattcccaacactccacatcattttctctctcataattcaacatccattcaattttta 39238484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 395 - 435
Target Start/End: Original strand, 177150 - 177190
Alignment:
Q  395 cattcaacactctaccccaccactttttatttcttattctt 435  Q
    ||||||||||||||| | ||||||||||||||| |||||||    
T  177150 cattcaacactctactctaccactttttatttcatattctt 177190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 395 - 435
Target Start/End: Original strand, 36609398 - 36609437
Alignment:
Q  395 cattcaacactctaccccaccactttttatttcttattctt 435  Q
    ||||||||||||||||| ||||||||||||||| |||||||    
T  36609398 cattcaacactctaccc-accactttttatttcatattctt 36609437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 114; Significance: 1e-57; HSPs: 37)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 273 - 435
Target Start/End: Original strand, 37245463 - 37245631
Alignment:
Q  273 agaccatccccaatggttaaacacattcaacaccattcaaaatccactttttcaatttccaacactctacatcattttctctttcttattcaacactcat 372  Q
    |||||||||||||||||| |||| ||| |||||||||||| | |||||||||||||| ||||||||| |||||||||||||| |||||||||||||||||    
T  37245463 agaccatccccaatggttcaacatatttaacaccattcaacacccactttttcaattcccaacactccacatcattttctctctcttattcaacactcat 37245562  T
Q  373 tcaacttttaccct------tggtttttcattcaacactctaccccaccactttttatttcttattctt 435  Q
    ||||||||||||||      |||||||||||||||||||||||||||||||||||||||||||||||||    
T  37245563 tcaacttttaccctctccaatggtttttcattcaacactctaccccaccactttttatttcttattctt 37245631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 298 - 435
Target Start/End: Complemental strand, 927978 - 927835
Alignment:
Q  298 ttcaacaccattcaaaatccactttttcaatttccaacactctacatcattttctctttcttattcaacactcattcaacttttaccct------tggtt 391  Q
    |||||||| |||||| | ||||||||| |||| ||||||||| |||||||||||||| |||||||||||||||||||||||||||| ||      |||||    
T  927978 ttcaacactattcaacacccacttttttaattcccaacactccacatcattttctctctcttattcaacactcattcaacttttacactctctaatggtt 927879  T
Q  392 tttcattcaacactctaccccaccactttttatttcttattctt 435  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  927878 tttcattcaacactctaccccaccactttttatttcttattctt 927835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 283 - 435
Target Start/End: Original strand, 6362926 - 6363085
Alignment:
Q  283 caatggttaaacacattcaacaccattcaaaatccactttttcaatttccaacactctacatcattttctctttctt-attcaacactcattcaactttt 381  Q
    |||||||||||| ||||||||| |  |||| |||||||||||||||| |||||||||||||||||||||||| |||| ||||||||||||||||||||||    
T  6362926 caatggttaaacccattcaacaacggtcaacatccactttttcaatt-ccaacactctacatcattttctctctcttaattcaacactcattcaactttt 6363024  T
Q  382 accc-------ttggtttttcattcaacactctaccccaccactttttatttcttattctt 435  Q
    ||||       ||| |||||||||||||||| ||||||||||| |||||||||||||||||    
T  6363025 accctctacaattgttttttcattcaacactttaccccaccaccttttatttcttattctt 6363085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 320 - 435
Target Start/End: Complemental strand, 31193048 - 31192927
Alignment:
Q  320 tttttcaatttccaacactctacatcattttctctttcttattcaacactcattcaacttttaccct------tggtttttcattcaacactctacccca 413  Q
    |||||||||||||||||||| |||||||||||||| |||||||||| ||||||||||||||||||||      |||||||||||||||||||||||||||    
T  31193048 tttttcaatttccaacactccacatcattttctctctcttattcaatactcattcaacttttaccctctccaatggtttttcattcaacactctacccca 31192949  T
Q  414 ccactttttatttcttattctt 435  Q
    ||||||| ||||||||||||||    
T  31192948 ccactttgtatttcttattctt 31192927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 317 - 435
Target Start/End: Original strand, 38901726 - 38901850
Alignment:
Q  317 cactttttcaatttccaacactctacatcattttctctttcttattcaacactcattcaacttttaccct------tggtttttcattcaacactctacc 410  Q
    ||||||||||||| | ||||||| |||||||||||||| ||||||||||||||| |||||||||||||||      ||||||||||||||||||| ||||    
T  38901726 cactttttcaattccaaacactccacatcattttctctctcttattcaacactcgttcaacttttaccctctccaatggtttttcattcaacactttacc 38901825  T
Q  411 ccaccactttttatttcttattctt 435  Q
    |||||||||||||||||||||||||    
T  38901826 ccaccactttttatttcttattctt 38901850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 303 - 435
Target Start/End: Complemental strand, 9074305 - 9074168
Alignment:
Q  303 caccattcaaaatccactttttcaatttccaacactctacatcattttctctttcttattcaacactcattcaacttttaccct------tggtttttca 396  Q
    |||||||||| | ||||||||| |||| ||||||||| |||||||||||||| |||||||||||||||||||||||||||||||      ||||||||||    
T  9074305 caccattcaaca-ccacttttttaattcccaacactccacatcattttctctctcttattcaacactcattcaacttttaccctctccaatggtttttca 9074207  T
Q  397 ttcaacactctaccccaccactttttatttcttattctt 435  Q
    ||||||||||||||||| || ||||||||| ||||||||    
T  9074206 ttcaacactctaccccatcattttttattttttattctt 9074168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 271 - 432
Target Start/End: Complemental strand, 30822696 - 30822529
Alignment:
Q  271 taagaccatccccaatggttaaacacattcaacaccattcaaaatccactttttcaatttccaacactctacatcattttctctttctt-attcaacact 369  Q
    ||||||||||  ||||||||||||||| | || ||||||||| | |||||||||||||| ||||||||| |||||||||||||| |||| ||||||||||    
T  30822696 taagaccatctacaatggttaaacacaat-aataccattcaacacccactttttcaattcccaacactccacatcattttctctctcttcattcaacact 30822598  T
Q  370 cattcaacttttacc-ct----tgg-tttttcattcaacactctaccccaccactttttatttcttatt 432  Q
    ||||||| ||||||| ||    ||| ||||||||||||||| |||||||||||| ||||||||||||||    
T  30822597 cattcaatttttacctctccaatggttttttcattcaacaccctaccccaccaccttttatttcttatt 30822529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 307 - 435
Target Start/End: Complemental strand, 31174262 - 31174129
Alignment:
Q  307 attcaaaatccactttttcaatttccaacactctacatcattttctctttcttattcaacactcattcaacttttaccct------tggtttttcattca 400  Q
    |||||| |||||||||||||||| ||||||||| |||| ||||  ||| ||||||||||||||||||||||||||||| |      ||||||||||||||    
T  31174262 attcaatatccactttttcaattcccaacactccacattattta-tctctcttattcaacactcattcaacttttaccatccccaatggtttttcattca 31174164  T
Q  401 acactctaccccaccactttttatttcttattctt 435  Q
    |||||||||||| ||||||||||||||||||||||    
T  31174163 acactctaccccgccactttttatttcttattctt 31174129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 298 - 435
Target Start/End: Complemental strand, 5146798 - 5146654
Alignment:
Q  298 ttcaacaccattcaaaatccactttttcaatttccaacactctacatcattttctctttc-ttattcaacactcattcaacttttaccct------tggt 390  Q
    ||||| ||| ||||| | ||| ||||| |||||||||||||| |||||||||||||| || |||||||||||||||| ||||||||||||      || |    
T  5146798 ttcaatacccttcaacacccatttttttaatttccaacactccacatcattttctctctctttattcaacactcatttaacttttaccctctgcaatgat 5146699  T
Q  391 ttttcattcaacactctaccccaccactttttatttcttattctt 435  Q
    |||||||||||||| ||||||||||||||||||||||||||||||    
T  5146698 ttttcattcaacaccctaccccaccactttttatttcttattctt 5146654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 273 - 432
Target Start/End: Original strand, 12854982 - 12855147
Alignment:
Q  273 agaccatccccaatggttaaacacattcaacaccattcaaaatccactttttcaatttccaacactctacatcattttctctttctt-attcaacactca 371  Q
    ||||||||  ||||||||||||||| | || ||||||||| | |||||||||||||| ||||||||| |||||||||||||| |||| ||||||||||||    
T  12854982 agaccatctacaatggttaaacacaat-aataccattcaacacccactttttcaattcccaacactccacatcattttctctctcttcattcaacactca 12855080  T
Q  372 ttcaacttttacc-ct----tgg-tttttcattcaacactctaccccaccactttttatttcttatt 432  Q
    ||||| ||||||| ||    ||| ||||||||||||||| |||||||||||| ||||||||||||||    
T  12855081 ttcaatttttacctctccaatggttttttcattcaacaccctaccccaccaccttttatttcttatt 12855147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 306 - 435
Target Start/End: Complemental strand, 39434090 - 39433955
Alignment:
Q  306 cattcaaaatccactttttcaatttccaacactctacatcattttctctttcttattcaacactcattcaacttttaccct------tggtttttcattc 399  Q
    ||||||| | ||||||||||||||||||||| || |||||||||| ||| | ||||| ||||||||||||||||||| |||      || ||||||||||    
T  39434090 cattcaacacccactttttcaatttccaacattccacatcattttttctcttttattaaacactcattcaacttttatcctctccaatgatttttcattc 39433991  T
Q  400 aacactctaccccaccactttttatttcttattctt 435  Q
    ||||||||| ||||||||||||||||||||||||||    
T  39433990 aacactctatcccaccactttttatttcttattctt 39433955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 296 - 416
Target Start/End: Original strand, 1987104 - 1987230
Alignment:
Q  296 cattcaacaccattcaaaatccactttttcaatttccaacactctacatcattttctctttcttattcaacactcattcaacttttaccct------tgg 389  Q
    |||||||||| |||||| || |||||||||||||  |||||||| |||||||||||| | |||||||||||||||||||||||||||||||      ||     
T  1987104 cattcaacactattcaacattcactttttcaattctcaacactccacatcattttctatctcttattcaacactcattcaacttttaccctctccaatga 1987203  T
Q  390 tttttcattcaacactctaccccacca 416  Q
    |||||||||||||||||||||||||||    
T  1987204 tttttcattcaacactctaccccacca 1987230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 283 - 435
Target Start/End: Complemental strand, 1073185 - 1073026
Alignment:
Q  283 caatggttaaacacattcaacaccattcaaaatccactttttcaatttccaacactctacatcattttctctttctt-attcaacactcattcaactttt 381  Q
    ||||||| ||||| |||||||| |  |||| ||||||||||||||||| |||||||| || ||||||||||| |||| ||||||||||||||||| ||||    
T  1073185 caatggtaaaacaaattcaacaaccctcaacatccactttttcaattttcaacactccacttcattttctctctcttaattcaacactcattcaattttt 1073086  T
Q  382 acc-ct----tgg-tttttcattcaacactctaccccaccactttttatttcttattctt 435  Q
    ||| ||    ||| |||||||||||||||||||||||||||  |||||||||||||||||    
T  1073085 acctctccaatggttttttcattcaacactctaccccaccatcttttatttcttattctt 1073026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 283 - 431
Target Start/End: Complemental strand, 14152169 - 14152013
Alignment:
Q  283 caatggttaaacacattcaacaccattcaaaatccactttttcaatttccaacactctacatcattttctct-ttcttattcaacactcattcaactttt 381  Q
    |||||||||||  ||||||||| ||||||| | |||||||||||||| ||||||||| |||||||||||||| || | ||||||||| ||||||||||||    
T  14152169 caatggttaaaaccattcaacaacattcaacacccactttttcaattcccaacactccacatcattttctctcttttaattcaacacccattcaactttt 14152070  T
Q  382 acc--ctt-----ggtttttcattcaacactctaccccaccactttttatttcttat 431  Q
    |||  |||     | |||||||||||||||||| ||||||||| |||||||||||||    
T  14152069 accatcttcaatggttttttcattcaacactctgccccaccaccttttatttcttat 14152013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 283 - 435
Target Start/End: Original strand, 24997053 - 24997211
Alignment:
Q  283 caatggttaaacacattcaacaccattcaaaatccactttttcaatttccaacactctacatcattttctctttctt-attcaacactcattcaactttt 381  Q
    |||||||| |||||| | || ||||||||| | |||||||||||||| ||||||||| |||||||||||||| |||| ||||||||||||||||| ||||    
T  24997053 caatggttcaacacaat-aataccattcaacacccactttttcaattcccaacactccacatcattttctctctcttaattcaacactcattcaattttt 24997151  T
Q  382 acc------cttggtttttcattcaacactctaccccaccactttttatttcttattctt 435  Q
    |||       | | ||||||||||||||| |||||||||||| |||||||||||||||||    
T  24997152 acctctccaatagttttttcattcaacaccctaccccaccaccttttatttcttattctt 24997211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 318 - 435
Target Start/End: Complemental strand, 36209541 - 36209418
Alignment:
Q  318 actttttcaatttccaacactctacatcattttctctttctt-attcaacactcattcaactttta-----cccttggtttttcattcaacactctaccc 411  Q
    ||||||||||||  |||||||| ||||||||||||||||||| ||||||||||||||||| |||||     ||  ||||||| |||||||||||||||||    
T  36209541 actttttcaattctcaacactccacatcattttctctttcttaattcaacactcattcaatttttatctctcctatggttttccattcaacactctaccc 36209442  T
Q  412 caccactttttatttcttattctt 435  Q
    |||||| |||||||||||||||||    
T  36209441 caccaccttttatttcttattctt 36209418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 283 - 435
Target Start/End: Complemental strand, 4296872 - 4296714
Alignment:
Q  283 caatggttaaacacattcaacaccattcaaaatccactttttcaatttccaacactctacatcattttctctttctt-attcaacactcattcaactttt 381  Q
    |||||||| |||||| | || ||||||||| | |||||||||||||| ||||||||| |||| ||||||||| |||| ||||||||||||||||| ||||    
T  4296872 caatggttcaacacaat-aataccattcaacacccactttttcaattcccaacactccacattattttctctctcttaattcaacactcattcaattttt 4296774  T
Q  382 acc-ct----tgg-tttttcattcaacactctaccccaccactttttatttcttattctt 435  Q
    ||| ||    ||| ||||||||||||||| |||||||||||| |||||||||||||||||    
T  4296773 acctctccaatggttttttcattcaacaccctaccccaccaccttttatttcttattctt 4296714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 287 - 435
Target Start/End: Complemental strand, 13151582 - 13151426
Alignment:
Q  287 ggttaaacacattcaacaccattcaaaatccactttttcaatttccaacactctacatcattttctctttctt-attcaacactcattcaacttttaccc 385  Q
    |||||||  ||||||||| ||||||| | |||||||||||||| ||||||||  |||| ||||| | | |||| ||||||||||||||||||||||||||    
T  13151582 ggttaaaaccattcaacaacattcaacacccactttttcaattcccaacactgcacataattttttttctcttaattcaacactcattcaacttttaccc 13151483  T
Q  386 t------tgg-tttttcattcaacactctaccccaccactttttatttcttattctt 435  Q
    |      ||| |||||||||||||||||||||||||||| |||||||||||| ||||    
T  13151482 tctccaatggttttttcattcaacactctaccccaccaccttttatttcttaatctt 13151426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 297 - 435
Target Start/End: Complemental strand, 22351702 - 22351557
Alignment:
Q  297 attcaacaccattcaaaatccactttttcaatttccaacactctacatcattttctctttctt-attcaacactcattcaacttttacc-ct----tgg- 389  Q
    |||||||| | ||||| | |||||||||||||| ||||||||| |||||||||||||| |||| ||||||||| ||||||| ||||||| ||    |||     
T  22351702 attcaacaaccttcaacacccactttttcaattcccaacactccacatcattttctctctcttaattcaacacccattcaatttttacctctccaatggt 22351603  T
Q  390 tttttcattcaacactctaccccaccactttttatttcttattctt 435  Q
    ||||||||||||||| |||||||||||| |||||||||||||||||    
T  22351602 tttttcattcaacaccctaccccaccaccttttatttcttattctt 22351557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 297 - 435
Target Start/End: Original strand, 43021727 - 43021872
Alignment:
Q  297 attcaacaccattcaaaatccactttttcaatttccaacactctacatcattttctctttctt-attcaacactcattcaacttttacc-ct----tggt 390  Q
    |||||||| | ||||| | |||||||||||||| ||||||||| |||||||||||||| |||| ||||||||| ||||||| ||||||| ||    ||||    
T  43021727 attcaacaaccttcaacacccactttttcaattcccaacactccacatcattttctctctcttaattcaacacccattcaatttttacctctccaatggt 43021826  T
Q  391 t-tttcattcaacactctaccccaccactttttatttcttattctt 435  Q
    | ||||||||||||| |||||||||||| |||||||||||||||||    
T  43021827 tctttcattcaacaccctaccccaccaccttttatttcttattctt 43021872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 283 - 435
Target Start/End: Original strand, 8852030 - 8852188
Alignment:
Q  283 caatggttaaacacattcaacaccattcaaaatccactttttcaatttccaacactctacatcattttctctttctt-attcaacactcattcaactttt 381  Q
    |||||||| |||||| | || ||||||||| | |||||||||||||| ||||||||| |||||||||||||| |||| |||||||||||||| || ||||    
T  8852030 caatggttcaacacaat-aataccattcaacacccactttttcaattcccaacactccacatcattttctctctcttaattcaacactcatttaattttt 8852128  T
Q  382 a-----cccttgg-tttttcattcaacactctaccccaccactttttatttcttattctt 435  Q
    |     ||  ||| ||||||||||||||| |||||||||||| |||||||||||||||||    
T  8852129 atctctccaatggttttttcattcaacaccctaccccaccaccttttatttcttattctt 8852188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 283 - 435
Target Start/End: Complemental strand, 7588606 - 7588445
Alignment:
Q  283 caatggttaaacacattcaacaccattcaaaatccactttttcaatttccaacactctacatcattttctctttc---ttattcaacactcattcaactt 379  Q
    ||||||| ||| |||||||||| | ||||| | |||||||||||||| ||||||||| |||||||||||||| ||   | ||||||||| ||||||| ||    
T  7588606 caatggtaaaatacattcaacaaccttcaacacccactttttcaattcccaacactccacatcattttctctctctcttaattcaacacccattcaattt 7588507  T
Q  380 ttacc-ct----tgg-tttttcattcaacactctaccccaccactttttatttcttattctt 435  Q
    ||||| ||    ||| ||||||||||||||| |||||||||||| |||||||||||||||||    
T  7588506 ttacctctccaatggttttttcattcaacaccctaccccaccaccttttatttcttattctt 7588445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 320 - 435
Target Start/End: Complemental strand, 36855838 - 36855717
Alignment:
Q  320 tttttcaatttccaacactctacatcattttctctttcttattcaacactcattcaacttttaccct------tggtttttcattcaacactctacccca 413  Q
    |||||||||| |||||||||  ||| ||||| ||| |||||||||||||||||||||||||||||||      || ||||| ||||||||||||||||||    
T  36855838 tttttcaattcccaacactccccattattttttctctcttattcaacactcattcaacttttaccctctccaatgatttttaattcaacactctacccca 36855739  T
Q  414 ccactttttatttcttattctt 435  Q
    ||| ||||||||| ||||||||    
T  36855738 ccattttttattttttattctt 36855717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 284 - 435
Target Start/End: Original strand, 9117785 - 9117943
Alignment:
Q  284 aatggttaaacacattcaacaccattcaaaatccactttttcaatttccaacactctacatcattttctctttctt-attcaacactcattcaactttta 382  Q
    |||||| ||||| |||||||| |  |||| | ||||||||||||||| |||||||| |  ||||||||||| |||| ||||||||||||||||| |||||    
T  9117785 aatggtaaaacaaattcaacaactctcaacacccactttttcaattttcaacactccatttcattttctctctcttaattcaacactcattcaattttta 9117884  T
Q  383 cc-ct----tgg-tttttcattcaacactctaccccaccactttttatttcttattctt 435  Q
    || ||    ||| |||||||||||||| ||||||||||||| |||||||||||||||||    
T  9117885 cctctccaatggttttttcattcaacattctaccccaccaccttttatttcttattctt 9117943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 298 - 435
Target Start/End: Original strand, 39490130 - 39490273
Alignment:
Q  298 ttcaacaccattcaaaatccactttttcaatttccaacactctacatcattttctctttctt-attcaacactcattcaactttta-----cccttggtt 391  Q
    ||||| ||| ||||| | |||||||||||||| ||||||||| | |||||| ||||| |||| ||||||||||||||||| |||||     ||  || ||    
T  39490130 ttcaatacccttcaacacccactttttcaattcccaacactccaaatcattctctctctcttaattcaacactcattcaatttttatctctccaatgatt 39490229  T
Q  392 tttcattcaacactctaccccaccactttttatttcttattctt 435  Q
    ||||||||||||||||||| |||||| |||||||||||||||||    
T  39490230 tttcattcaacactctacctcaccaccttttatttcttattctt 39490273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 283 - 435
Target Start/End: Original strand, 44279964 - 44280123
Alignment:
Q  283 caatggttaaacacattcaacaccattcaaaatccactttttcaatttccaacactctacatcattttctctttctt-attcaacactcattcaactttt 381  Q
    ||||||| || || |||||||| | || || | ||||||||||||||| |||||||| |||||||||||||| |||| ||||||||| | ||||| ||||    
T  44279964 caatggtaaatcaaattcaacaacctttaacacccactttttcaattttcaacactccacatcattttctctctcttaattcaacaccctttcaattttt 44280063  T
Q  382 acc------cttggtttttcattcaacactctaccccaccactttttatttcttattctt 435  Q
    |||       | | ||||||||||||||| |||||||||||| |||||||||||||||||    
T  44280064 acctctccaatagttttttcattcaacaccctaccccaccaccttttatttcttattctt 44280123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 308 - 435
Target Start/End: Complemental strand, 1308774 - 1308640
Alignment:
Q  308 ttcaaaatccactttttcaatttccaacactctacatcattttctctttc-ttattcaacactcattcaacttttac----cc--ttggtttttcattca 400  Q
    ||||| |||||||||||||||||||||||||| |||||||||||||| || | || |||||| |||| || ||||||    ||  | | |||||||||||    
T  1308774 ttcaacatccactttttcaatttccaacactccacatcattttctctctcataatccaacacacatttaatttttacttctccaatggttttttcattca 1308675  T
Q  401 acactctaccccaccactttttatttcttattctt 435  Q
    |||| |||||||||||| |||||||||||||||||    
T  1308674 acaccctaccccaccaccttttatttcttattctt 1308640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 309 - 435
Target Start/End: Original strand, 14382965 - 14383098
Alignment:
Q  309 tcaaaatccactttttcaatttccaacactctacatcattttctctttctta-ttcaacactcattcaacttttacc-ct----tggtttt-tcattcaa 401  Q
    |||| |||||||||||||||| | ||||||| |||||||||||||| ||||| ||||||||   ||||| ||||||| ||    ||||||| ||||||||    
T  14382965 tcaacatccactttttcaattcctaacactccacatcattttctctctcttaattcaacaccttttcaatttttacctctccaatggttttttcattcaa 14383064  T
Q  402 cactctaccccaccactttttatttcttattctt 435  Q
    ||| |||||||||||| |||||||||||||||||    
T  14383065 caccctaccccaccacattttatttcttattctt 14383098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 298 - 384
Target Start/End: Original strand, 17485804 - 17485891
Alignment:
Q  298 ttcaacaccattcaaaatccactttttcaatttccaacactctacatcattttctctttc-ttattcaacactcattcaacttttacc 384  Q
    ||||| ||| ||||| |||||||||||||||| ||||||||| |||||||||||||| || | ||||||||||||||||| |||||||    
T  17485804 ttcaatacccttcaacatccactttttcaattcccaacactccacatcattttctctctcataattcaacactcattcaatttttacc 17485891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 283 - 435
Target Start/End: Complemental strand, 17929357 - 17929198
Alignment:
Q  283 caatggttaaacacattcaacaccattcaaaatccactttttcaatttccaacactctacatcattttctctttc-ttattcaacactcattcaactttt 381  Q
    ||||||||||| |  ||||| ||| ||||| ||||| |||||||||| ||||||||| |||||||||||||| || | ||| ||||| ||||||| ||||    
T  17929357 caatggttaaaaattttcaatacccttcaacatccattttttcaattcccaacactccacatcattttctctctcataatttaacacccattcaattttt 17929258  T
Q  382 ac----cc--ttggtttttcattcaacactctaccccaccactttttatttcttattctt 435  Q
    ||    ||  | | ||||||||||||||||||| |||||||  |||||||||||||||||    
T  17929257 acatctccaatggttttttcattcaacactctatcccaccatcttttatttcttattctt 17929198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 318 - 435
Target Start/End: Complemental strand, 7763554 - 7763432
Alignment:
Q  318 actttttcaatttccaacactctacatcattttctctttctta-ttcaacactcattcaacttttaccc----ttggtttttcattcaacactctacccc 412  Q
    ||||||||||||  |||||||| |||||||||||||| ||||| |||||||| ||||||| ||||| |     |   ||||||||||||||  |||||||    
T  7763554 actttttcaattctcaacactccacatcattttctctctcttaattcaacacccattcaatttttatctccaataattttttcattcaacatcctacccc 7763455  T
Q  413 accactttttatttcttattctt 435  Q
    ||||| |||||||||||||||||    
T  7763454 accaccttttatttcttattctt 7763432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 315 - 383
Target Start/End: Complemental strand, 2780806 - 2780738
Alignment:
Q  315 tccactttttcaatttccaacactctacatcattttctctttcttattcaacactcattcaacttttac 383  Q
    ||||||||||||||| | |||| ||||||||||||||||| |||||||||||||  ||| |||||||||    
T  2780806 tccactttttcaattcctaacattctacatcattttctctctcttattcaacacctatttaacttttac 2780738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 389 - 435
Target Start/End: Complemental strand, 16218854 - 16218808
Alignment:
Q  389 gtttttcattcaacactctaccccaccactttttatttcttattctt 435  Q
    |||||||||||||||||||||||||| |||||||||||| |||||||    
T  16218854 gtttttcattcaacactctaccccacaactttttatttcatattctt 16218808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 360 - 423
Target Start/End: Complemental strand, 43495741 - 43495672
Alignment:
Q  360 attcaacactcattcaacttttaccct------tggtttttcattcaacactctaccccaccacttttta 423  Q
    ||||||||||||||||||||||| |||      || ||||||||||||||||||||||||||||||||||    
T  43495741 attcaacactcattcaacttttatcctctccaatgatttttcattcaacactctaccccaccacttttta 43495672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 297 - 435
Target Start/End: Complemental strand, 6333465 - 6333332
Alignment:
Q  297 attcaacaccattcaaaatccactttttcaatttccaacactctacatcattttctctttcttattcaacactcattcaacttttacccttggtttttca 396  Q
    |||||||| ||||||| |||||||||||||||| | || | || | |||||||||||| |||||||||||  | || |     |  ||  || |||||||    
T  6333465 attcaacaacattcaacatccactttttcaattcctaatattccatatcattttctctctcttattcaacttttatcc-----tctccaatgatttttca 6333371  T
Q  397 ttcaacactctaccccaccactttttatttcttattctt 435  Q
    ||||||||||||||| ||||  |||||||||||||||||    
T  6333370 ttcaacactctaccctaccatcttttatttcttattctt 6333332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 398 - 435
Target Start/End: Original strand, 4278167 - 4278204
Alignment:
Q  398 tcaacactctaccccaccactttttatttcttattctt 435  Q
    |||||| ||| |||||||||||||||||||||||||||    
T  4278167 tcaacaatctgccccaccactttttatttcttattctt 4278204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 316 - 384
Target Start/End: Original strand, 36526826 - 36526895
Alignment:
Q  316 ccactttttcaatttccaacactctacatcattttctctttctt-attcaacactcattcaacttttacc 384  Q
    |||||||||||||| ||||||||| |||| ||||||||| |||| ||| ||||| |||| || |||||||    
T  36526826 ccactttttcaattcccaacactccacattattttctctctcttaatttaacacccatttaatttttacc 36526895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 108; Significance: 4e-54; HSPs: 38)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 108; E-Value: 4e-54
Query Start/End: Original strand, 271 - 435
Target Start/End: Complemental strand, 22737708 - 22737538
Alignment:
Q  271 taagaccatccccaatggttaaacacattcaacaccattcaaaatccactttttcaatttccaacactctacatcattttctctttcttattcaacactc 370  Q
    |||||||||||||||||||| |||| |||||||| ||||||| | |||||||||||||| ||||||||| |||||||||||||| |||||||||||| ||    
T  22737708 taagaccatccccaatggttcaacatattcaacagcattcaacacccactttttcaattcccaacactccacatcattttctctctcttattcaacattc 22737609  T
Q  371 attcaacttttaccct------tggtttttcattcaacactctaccccaccactttttatttcttattctt 435  Q
    |||||||||||||| |      |||||||||||||||||||||||||||||||||||||||||||||||||    
T  22737608 attcaacttttaccttctccaatggtttttcattcaacactctaccccaccactttttatttcttattctt 22737538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 270 - 435
Target Start/End: Original strand, 22191179 - 22191348
Alignment:
Q  270 ttaagaccatccccaatggttaaacacattcaacaccattcaaaatccactttttcaatttccaacactctacatcattttctctttcttattcaacact 369  Q
    ||||||||||||| |||||||     ||||||||||||||||| | |||||||||||||||||||||||| |||||||||||||| ||||||||||||||    
T  22191179 ttaagaccatccctaatggtttttaccattcaacaccattcaaca-ccactttttcaatttccaacactccacatcattttctctctcttattcaacact 22191277  T
Q  370 cattcaacttttaccct------tggtttttcattcaacactctaccccaccactttttatttcttattctt 435  Q
    |||||||||||||||||      ||| |||||||||||||||||||||||||||||||||||||||||||||    
T  22191278 cattcaacttttaccctctccaatgg-ttttcattcaacactctaccccaccactttttatttcttattctt 22191348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 298 - 435
Target Start/End: Original strand, 24793477 - 24793620
Alignment:
Q  298 ttcaacaccattcaaaatccactttttcaatttccaacactctacatcattttctctttcttattcaacactcattcaacttttaccct------tggtt 391  Q
    ||||||||||||||| | || ||||||||| | ||||||||| | ||||||||||||||||||||||||||||||||||||||||| ||      |||||    
T  24793477 ttcaacaccattcaacaccccctttttcaagtcccaacactccaaatcattttctctttcttattcaacactcattcaacttttacactctccaatggtt 24793576  T
Q  392 tttcattcaacactctaccccaccactttttatttcttattctt 435  Q
    ||||||||||||||||||||||||||||| ||||||||||||||    
T  24793577 tttcattcaacactctaccccaccactttctatttcttattctt 24793620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 316 - 435
Target Start/End: Original strand, 21654850 - 21654975
Alignment:
Q  316 ccactttttcaatttccaacactctacatcattttctctttcttattcaacactcattcaacttttaccct------tggtttttcattcaacactctac 409  Q
    |||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||| ||||||||      |||||||||||||||||||||||    
T  21654850 ccactttttcaatttccaacactccacatcattttctctctcttattcaacactcattcaacatttaccctctccaatggtttttcattcaacactctac 21654949  T
Q  410 cccaccactttttatttcttattctt 435  Q
    ||||||| ||||||||| ||||||||    
T  21654950 cccaccattttttattttttattctt 21654975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 316 - 435
Target Start/End: Original strand, 48984911 - 48985036
Alignment:
Q  316 ccactttttcaatttccaacactctacatcattttctctttcttattcaacactcattcaacttttaccct------tggtttttcattcaacactctac 409  Q
    |||||||||||||||||||| ||| |||||||||||||| |||||||||||||||||||||| |||||| |      |||||||||||||||||||||||    
T  48984911 ccactttttcaatttccaacgctccacatcattttctctctcttattcaacactcattcaacatttaccatctccaatggtttttcattcaacactctac 48985010  T
Q  410 cccaccactttttatttcttattctt 435  Q
    ||||||||||||||| ||||||||||    
T  48985011 cccaccactttttatctcttattctt 48985036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 301 - 435
Target Start/End: Complemental strand, 25218891 - 25218751
Alignment:
Q  301 aacaccattcaaaatccactttttcaatttccaacactctacatcattttctctttcttattcaacactcattcaacttttaccct------tggttttt 394  Q
    ||||||||| || |||||||||||||||||||||||||  | |||||||||||| |||||||||| ||||||| ||||||||||||      ||||||||    
T  25218891 aacaccatttaacatccactttttcaatttccaacacttcatatcattttctctctcttattcaatactcatttaacttttaccctctccaatggttttt 25218792  T
Q  395 cattcaacactctaccccaccactttttatttcttattctt 435  Q
    |||||||||||||||||||||| ||||||||| ||||||||    
T  25218791 cattcaacactctaccccaccattttttattttttattctt 25218751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 298 - 435
Target Start/End: Original strand, 38970017 - 38970162
Alignment:
Q  298 ttcaacaccattcaaaatccactttttcaatttccaacactctacatcattttctctt--tcttattcaacactcattcaacttttaccct------tgg 389  Q
    ||||||||| ||||| | |||||||||||||||||||||||| |||||||||| | ||  ||||||||||||||||||||||||||||| |      ||     
T  38970017 ttcaacacctttcaacacccactttttcaatttccaacactccacatcatttttttttcctcttattcaacactcattcaacttttaccgtctccaatga 38970116  T
Q  390 tttttcattcaacactctaccccaccactttttatttcttattctt 435  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||    
T  38970117 tttttcattcaacaccctaccccaccactttttatttcttattctt 38970162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 316 - 435
Target Start/End: Complemental strand, 30630882 - 30630757
Alignment:
Q  316 ccactttttcaatttccaacactctacatcattttctctttcttattcaacactcattcaacttttaccct------tggtttttcattcaacactctac 409  Q
    ||||||||| |||| ||||||||| |||| ||||||||| |||||||||| ||||||||||||||||| ||      |||||||||||||||||||||||    
T  30630882 ccacttttttaattcccaacactccacattattttctctctcttattcaatactcattcaacttttactctctccaatggtttttcattcaacactctac 30630783  T
Q  410 cccaccactttttatttcttattctt 435  Q
    ||||||||||||||||||||||||||    
T  30630782 cccaccactttttatttcttattctt 30630757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 283 - 435
Target Start/End: Original strand, 36518486 - 36518644
Alignment:
Q  283 caatggttaaacacattcaacaccattcaaaatccactttttcaatttccaacactctacatcattttctctttctt-attcaacactcattcaactttt 381  Q
    ||||||| ||| |||||||| | | ||||| | |||||||||||||| ||||||||| |||||||||||||| |||| ||||||||||||||||| ||||    
T  36518486 caatggtaaaatacattcaataaccttcaacacccactttttcaattcccaacactccacatcattttctctctcttaattcaacactcattcaattttt 36518585  T
Q  382 acc-ct----tggtttttcattcaacactctaccccaccactttttatttcttattctt 435  Q
    ||| ||    |||||||| ||||||||| |||||||||||| |||||||||||||||||    
T  36518586 acctctccaatggttttttattcaacaccctaccccaccaccttttatttcttattctt 36518644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 283 - 435
Target Start/End: Complemental strand, 33078886 - 33078727
Alignment:
Q  283 caatggttaaacacattcaacaccattcaaaatccactttttcaatttccaacactctacatcattttctctttctt-attcaacactcattcaactttt 381  Q
    ||||||||||||| |||||||| |  |||| |||||||||||||||| ||||||||| || | ||||||||| |||| |||||||| |||||||| ||||    
T  33078886 caatggttaaacatattcaacaaccctcaacatccactttttcaattcccaacactccacgttattttctctctcttaattcaacattcattcaattttt 33078787  T
Q  382 acc------cttggtttttcattcaacactctaccccaccactttttatttcttattctt 435  Q
    |||       | | |||||||||||||||||||||||||||| |||||||||||||||||    
T  33078786 acctctccaatagttttttcattcaacactctaccccaccaccttttatttcttattctt 33078727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 316 - 435
Target Start/End: Complemental strand, 43571162 - 43571036
Alignment:
Q  316 ccactttttcaatttccaacactctacatcattttctctttcttattcaacactcattcaacttttac-----cc--ttggtttttcattcaacactcta 408  Q
    ||||||||||  || ||||||||| |||||||||||||| ||||||||||||||||||||||||||||     ||  | | |||||||||||||||||||    
T  43571162 ccactttttctcttcccaacactccacatcattttctctctcttattcaacactcattcaacttttactatctccaatggttttttcattcaacactcta 43571063  T
Q  409 ccccaccactttttatttcttattctt 435  Q
    ||||||||||||||||||| |||||||    
T  43571062 ccccaccactttttatttcatattctt 43571036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 316 - 435
Target Start/End: Original strand, 114494 - 114619
Alignment:
Q  316 ccactttttcaatttccaacactctacatcattttctctttcttattcaacactcattcaactttta------cccttggtttttcattcaacactctac 409  Q
    ||||||||| ||||  |||||||| |||||||||||||| |||||||||||||||||| ||||||||      ||  ||||||||||||||| ||| |||    
T  114494 ccactttttaaattctcaacactccacatcattttctctctcttattcaacactcatttaacttttatcatctccaatggtttttcattcaatactttac 114593  T
Q  410 cccaccactttttatttcttattctt 435  Q
    ||||||||||||||||||||||||||    
T  114594 cccaccactttttatttcttattctt 114619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 283 - 435
Target Start/End: Complemental strand, 47159595 - 47159437
Alignment:
Q  283 caatggttaaacacattcaacaccattcaaaatccactttttcaatttccaacactctacatcattttctctttctt-attcaacactcattcaactttt 381  Q
    ||||||| ||| |||||||||| | ||||| ||||||||||| |||| ||||||||| |||||||||||||| |||| ||||||||| ||||||| ||||    
T  47159595 caatggtaaaatacattcaacaaccttcaacatccacttttt-aattcccaacactccacatcattttctctctcttaattcaacacccattcaattttt 47159497  T
Q  382 acc-ct----tgg-tttttcattcaacactctaccccaccactttttatttcttattctt 435  Q
    ||| ||    ||| ||||||||||||||| |||||||||||| |||||||||||||||||    
T  47159496 acctctccaatggttttttcattcaacaccctaccccaccaccttttatttcttattctt 47159437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 317 - 435
Target Start/End: Complemental strand, 35193186 - 35193062
Alignment:
Q  317 cactttttcaatttccaacactctacatcattttctctttcttattcaacactcattcaacttttaccct------tggtttttcattcaacactctacc 410  Q
    ||||||||||||| ||||||||| |||| ||||||| | | ||||||||||||||||||||||||||| |      |||||||||||||||||||||| |    
T  35193186 cactttttcaattcccaacactccacataattttctttctattattcaacactcattcaacttttaccatctccaatggtttttcattcaacactctatc 35193087  T
Q  411 ccaccactttttatttcttattctt 435  Q
    |  ||||||||||||||||||||||    
T  35193086 catccactttttatttcttattctt 35193062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 318 - 435
Target Start/End: Original strand, 30720126 - 30720250
Alignment:
Q  318 actttttcaatttccaacactctacatcattttctctttctt-attcaacactcattcaacttttacc-ctt-----ggtttttcattcaacactctacc 410  Q
    |||||||||||||||||||||| |||||||||||||| |||| ||||||||| ||||||| ||||||| |||     | ||||||||||||||| |||||    
T  30720126 actttttcaatttccaacactccacatcattttctctctcttaattcaacacccattcaatttttacctcttcaatggttttttcattcaacaccctacc 30720225  T
Q  411 ccaccactttttatttcttattctt 435  Q
    ||||||| |||||||||||||||||    
T  30720226 ccaccaccttttatttcttattctt 30720250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 283 - 435
Target Start/End: Original strand, 5813070 - 5813228
Alignment:
Q  283 caatggttaaacacattcaacaccattcaaaatccactttttcaatttccaacactctacatcattttctctttctt-attcaacactcattcaactttt 381  Q
    |||||||| |||||| | || ||||||||| | |||||||||||||| ||||||||  |||||||||||||| |||| |||||||||| |||||| ||||    
T  5813070 caatggttcaacacaat-aataccattcaacacccactttttcaattcccaacactgcacatcattttctctctcttaattcaacacttattcaattttt 5813168  T
Q  382 acc-ct----tgg-tttttcattcaacactctaccccaccactttttatttcttattctt 435  Q
    ||| ||    ||| ||||||||||||||| |||||||||||| |||||||||||||||||    
T  5813169 acctctccaatggttttttcattcaacaccctaccccaccaccttttatttcttattctt 5813228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 316 - 435
Target Start/End: Complemental strand, 25038661 - 25038536
Alignment:
Q  316 ccactttttcaatttccaacactctacatcattttctctttcttattcaacactcattcaacttttaccct------tggtttttcattcaacactctac 409  Q
    ||||||||| |||| ||| ||||  |||||||||||||| |||||||| |||||||||||| |||||||||      ||||||||||||||||| | |||    
T  25038661 ccacttttttaattcccagcacttcacatcattttctctctcttattcgacactcattcaagttttaccctctccaatggtttttcattcaacattttac 25038562  T
Q  410 cccaccactttttatttcttattctt 435  Q
    | ||||||||||||||||||||||||    
T  25038561 ctcaccactttttatttcttattctt 25038536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 324 - 435
Target Start/End: Complemental strand, 26013258 - 26013142
Alignment:
Q  324 tcaatttccaacactctacatcattttctctttcttattcaacactcattcaacttttaccct------tggtttttcattcaacactctaccccaccac 417  Q
    |||||||||||||||| | |||||||||||| |||| ||||| ||||||||||||||||| ||      || |||||||||||||||| |||||||||||    
T  26013258 tcaatttccaacactccatatcattttctctctctt-ttcaatactcattcaacttttactctctccaatgatttttcattcaacactttaccccaccac 26013160  T
Q  418 tttttatttcttattctt 435  Q
    ||||||||||||||||||    
T  26013159 tttttatttcttattctt 26013142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 283 - 435
Target Start/End: Complemental strand, 35029209 - 35029051
Alignment:
Q  283 caatggttaaacacattcaacaccattcaaaatccactttttcaatttccaacactctacatcattttctctttctt-attcaacactcattcaactttt 381  Q
    |||||||| |||||| | || ||||||||| | | |||||||||||| |||||| || |||||||||||||| |||| ||||||||||||||||| ||||    
T  35029209 caatggttcaacacaat-aataccattcaacacctactttttcaattcccaacattccacatcattttctctctcttaattcaacactcattcaattttt 35029111  T
Q  382 acc-ct----tgg-tttttcattcaacactctaccccaccactttttatttcttattctt 435  Q
    ||| ||    ||| ||||||||||||||| |||||||||||| |||||||||||||||||    
T  35029110 acctctccaatggttttttcattcaacaccctaccccaccaccttttatttcttattctt 35029051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 316 - 435
Target Start/End: Original strand, 39769733 - 39769859
Alignment:
Q  316 ccactttttcaatttccaacactctacatcattttctctttc-ttattcaacactcattcaacttttacc-ct----tgg-tttttcattcaacactcta 408  Q
    |||||||||||||||||||||||| |||||||||||||| || | ||||||||||||||||| ||||||| ||    ||| ||||||||||||||| |||    
T  39769733 ccactttttcaatttccaacactccacatcattttctctctcataattcaacactcattcaatttttacctctctaatggttttttcattcaacacccta 39769832  T
Q  409 ccccaccactttttatttcttattctt 435  Q
    ||||||||  |||||||||||||||||    
T  39769833 ccccaccatcttttatttcttattctt 39769859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 283 - 435
Target Start/End: Original strand, 37887818 - 37887977
Alignment:
Q  283 caatggttaaacacattcaacaccattcaaaatccactttttcaatttccaacactctacatcattttctctttctta-ttcaacactcattcaactttt 381  Q
    ||||||| ||| | ||||||||   ||||| ||||| |||||||||| ||||||||| |||||||||| ||| ||||| |||||||  |||| || ||||    
T  37887818 caatggtaaaataaattcaacaatcttcaacatccattttttcaattcccaacactccacatcattttatctctcttaattcaacatccatttaattttt 37887917  T
Q  382 acc-ctt-----ggtttttcattcaacactctaccccaccactttttatttcttattctt 435  Q
    ||| |||     | ||||||||||||||||||||||||||||||||||||||||||||||    
T  37887918 acctcttcaatagttttttcattcaacactctaccccaccactttttatttcttattctt 37887977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 320 - 435
Target Start/End: Complemental strand, 40302555 - 40302433
Alignment:
Q  320 tttttcaatttccaacactctacatcattttctctttctt-attcaacactcattcaacttttacc-ct----tgg-tttttcattcaacactctacccc 412  Q
    |||||||||| ||||||||| |||||||||||||| |||| ||||||||||||||||| ||||||| ||    ||| |||||||||||||||  ||||||    
T  40302555 tttttcaattcccaacactccacatcattttctctctcttaattcaacactcattcaatttttacctctccaatggttttttcattcaacaccttacccc 40302456  T
Q  413 accactttttatttcttattctt 435  Q
    ||||| |||||||||||||||||    
T  40302455 accaccttttatttcttattctt 40302433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 309 - 435
Target Start/End: Original strand, 42881355 - 42881488
Alignment:
Q  309 tcaaaatccactttttcaatttccaacactctacatcattttctctttctt-attcaacactcattcaacttttacc-ct----tgg-tttttcattcaa 401  Q
    |||| |||||||||||||||| ||||||||| |||||||||||||| |||| |||||||||  |||||| ||||||| ||    ||| ||||||||||||    
T  42881355 tcaacatccactttttcaattcccaacactccacatcattttctctctcttaattcaacaccaattcaatttttacctctccaatggttttttcattcaa 42881454  T
Q  402 cactctaccccaccactttttatttcttattctt 435  Q
    ||| |||||||||||  |||||||||||||||||    
T  42881455 caccctaccccaccatcttttatttcttattctt 42881488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 273 - 335
Target Start/End: Original strand, 37888513 - 37888575
Alignment:
Q  273 agaccatccccaatggttaaacacattcaacaccattcaaaatccactttttcaatttccaac 335  Q
    ||||||||| |||||||||||||||||||||||||||||| |||||||||||||||| |||||    
T  37888513 agaccatcctcaatggttaaacacattcaacaccattcaacatccactttttcaattcccaac 37888575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 284 - 435
Target Start/End: Complemental strand, 28318143 - 28317986
Alignment:
Q  284 aatggttaaacacattcaacaccattcaaaatccactttttcaatttccaacactctacatcattttctctttctta-ttcaacactcattcaactttta 382  Q
    |||||| || || |||||||| | || || ||||||||||| |||| ||||||||| |||||||||||||| ||||| |||||||| | || || ||| |    
T  28318143 aatggtaaaccaaattcaacaacctttaacatccacttttttaattcccaacactccacatcattttctctctcttaattcaacacccttttaattttaa 28318044  T
Q  383 ccctt-----ggtttttcattcaacactctaccccaccactttttatttcttattctt 435  Q
    | |||     | ||||||||||||||| |||||||||||| |||||||||||||||||    
T  28318043 ctcttcaatagttttttcattcaacaccctaccccaccaccttttatttcttattctt 28317986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 298 - 435
Target Start/End: Complemental strand, 45549705 - 45549561
Alignment:
Q  298 ttcaacaccattcaaaatccactttttcaatttccaacactctacatcattttctctttctta-ttcaacactcattcaacttttaccctt------ggt 390  Q
    ||||| ||| ||||| | |||||||||||||| ||||||||| |||||||||| ||| || || |||||||| ||||||| |||||||  |      | |    
T  45549705 ttcaatacccttcaacaaccactttttcaattcccaacactccacatcattttttctctcataattcaacacccattcaatttttacctctccaatagtt 45549606  T
Q  391 ttttcattcaacactctaccccaccactttttatttcttattctt 435  Q
    |||||||||||||| |||||||||||| |||||||||||||||||    
T  45549605 ttttcattcaacaccctaccccaccaccttttatttcttattctt 45549561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 283 - 435
Target Start/End: Original strand, 30566571 - 30566730
Alignment:
Q  283 caatggttaaacacattcaacaccattcaaaatccactttttcaatttccaacactctacatcattttctctttctt-attcaacactcattcaactttt 381  Q
    ||||||| ||||| ||||||||    |||| | ||||||||||||||  |||||||| |||||||||||||| |||| ||||||||||||||||| ||||    
T  30566571 caatggtaaaacaaattcaacaatcctcaacacccactttttcaattctcaacactccacatcattttctctctcttaattcaacactcattcaattttt 30566670  T
Q  382 a------cccttggtttttcattcaacactctaccccaccactttttatttcttattctt 435  Q
    |      |  | | ||||||||||||||||||||||| |||| |||||||| ||||||||    
T  30566671 atctctccaatagttttttcattcaacactctaccccgccaccttttattttttattctt 30566730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 320 - 435
Target Start/End: Complemental strand, 33508590 - 33508467
Alignment:
Q  320 tttttcaatttccaacactctacatcattttctctttctt-attcaacactcattcaacttttacc------cttggtttttcattcaacactcta-ccc 411  Q
    |||||||||| |||||||||||| ||||||||||| |||| ||||||||||||||||| |||||||       |   ||||||||| ||||||||| |||    
T  33508590 tttttcaattcccaacactctacgtcattttctctctcttaattcaacactcattcaatttttacctctccaataattttttcatttaacactctacccc 33508491  T
Q  412 caccactttttatttcttattctt 435  Q
    ||||||||||||||||||||||||    
T  33508490 caccactttttatttcttattctt 33508467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 296 - 435
Target Start/End: Complemental strand, 43202228 - 43202079
Alignment:
Q  296 cattcaacaccattcaaaatccactttttcaatttccaa-cactctacatcattttctctttcttattcaacactcatt---caacttttaccct----- 386  Q
    |||||||||  |||||| |||||||||||||||  |||| ||||  |||| ||||||||| ||||| ||||||||||||   |||||||||||||         
T  43202228 cattcaacaaaattcaacatccactttttcaatgcccaatcacttcacattattttctctctcttactcaacactcattattcaacttttaccctctcca 43202129  T
Q  387 -tggtttttcattcaacactctaccccaccactttttatttcttattctt 435  Q
     |||||||| |||||||| ||||| ||||||| |||||||||||||||||    
T  43202128 atggttttttattcaacattctactccaccaccttttatttcttattctt 43202079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 318 - 435
Target Start/End: Original strand, 20354229 - 20354353
Alignment:
Q  318 actttttcaatttccaacactctacatcattttctctttctta-ttcaacactcattcaacttttacc-ct----tggtttt-tcattcaacactctacc 410  Q
    |||||||||||| | ||||||| |||||||||| ||| || || |||||||| ||||||| ||||||| ||    ||||||| ||||||||||| |||||    
T  20354229 actttttcaattcctaacactccacatcattttttctatcataattcaacacccattcaatttttacctctccaatggttttttcattcaacaccctacc 20354328  T
Q  411 ccaccactttttatttcttattctt 435  Q
    |||||||||||||||||||||||||    
T  20354329 ccaccactttttatttcttattctt 20354353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 298 - 435
Target Start/End: Original strand, 26812099 - 26812244
Alignment:
Q  298 ttcaacaccattcaaaatccactttttcaatttccaacactctacatcattttctctttctta-ttcaacactcattcaacttttacc-ct----tggtt 391  Q
    ||||| ||| ||||| | ||| |||||||||| ||||||||| | |||||||| |||||| || ||||| |||||||||| ||||||| ||    |||||    
T  26812099 ttcaatacccttcaacacccattttttcaattcccaacactccatatcattttatctttcataattcaatactcattcaaattttacctctccaatggtt 26812198  T
Q  392 tt--tcattcaacactctaccccaccactttttatttcttattctt 435  Q
    ||  ||||||||||  |||||||||||| |||||||||||||||||    
T  26812199 tttttcattcaacatcctaccccaccaccttttatttcttattctt 26812244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 283 - 435
Target Start/End: Original strand, 37951718 - 37951879
Alignment:
Q  283 caatggttaaacacattcaacaccattcaaaatccactttttcaatttccaacactctacatcatttt--ctctttctt-attcaacactcattcaactt 379  Q
    ||||||| ||| |||||||||| | ||||| | | |||||||||||| ||||||||| | ||||||||  |||| |||| ||||||||| ||||||| ||    
T  37951718 caatggtaaaatacattcaacaaccttcaacacctactttttcaattcccaacactccatatcattttccctctctcttaattcaacacccattcaattt 37951817  T
Q  380 ttacc-ct----tgg-tttttcattcaacactctaccccaccactttttatttcttattctt 435  Q
    ||||| ||    ||| |||||||||||||||  || |||||||| |||||||||||||||||    
T  37951818 ttacctctccaatggttttttcattcaacaccttatcccaccaccttttatttcttattctt 37951879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 320 - 435
Target Start/End: Original strand, 32748805 - 32748927
Alignment:
Q  320 tttttcaatttccaacactctacatcattttctctttctta-ttcaacactcattcaacttttac-----ccttggtttt-tcattcaacactctacccc 412  Q
    |||||||||| ||||||||| |||| ||||||||| || || || ||||||||||||| ||||||     |  || |||| ||||||||||| |||||||    
T  32748805 tttttcaattcccaacactccacattattttctctctcataatttaacactcattcaatttttacatctccaatgattttttcattcaacaccctacccc 32748904  T
Q  413 accactttttatttcttattctt 435  Q
    ||||| |||||||||||||||||    
T  32748905 accaccttttatttcttattctt 32748927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 298 - 435
Target Start/End: Complemental strand, 32130357 - 32130212
Alignment:
Q  298 ttcaacaccattcaaaatccactttttcaatttccaacactctacatcattttctctttctta-ttcaacactcattcaacttttacc-ct----tggtt 391  Q
    ||||| ||||| ||| | ||||||||| |||| ||||||||| |||||||||||||| || || || || || ||||||| ||||||| ||    |||||    
T  32130357 ttcaataccatgcaacacccacttttttaattcccaacactccacatcattttctctctcataatttaatacccattcaatttttacctctccaatggtt 32130258  T
Q  392 ttt--cattcaacactctaccccaccactttttatttcttattctt 435  Q
    |||  |||||||||  |||||||||||| |||||||||||||||||    
T  32130257 tttttcattcaacatcctaccccaccaccttttatttcttattctt 32130212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 395 - 435
Target Start/End: Complemental strand, 2414735 - 2414695
Alignment:
Q  395 cattcaacactctaccccaccactttttatttcttattctt 435  Q
    ||||||||||||||||||||||||||||||||| |||||||    
T  2414735 cattcaacactctaccccaccactttttatttcatattctt 2414695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 317 - 384
Target Start/End: Original strand, 38351584 - 38351652
Alignment:
Q  317 cactttttcaatttccaacactctacatcattttctctttc-ttattcaacactcattcaacttttacc 384  Q
    |||||||| |||||||||||||| ||||||||||||||||| | |||||||| ||||| || |||||||    
T  38351584 cacttttttaatttccaacactccacatcattttctctttcataattcaacattcatttaatttttacc 38351652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 360 - 435
Target Start/End: Complemental strand, 1940695 - 1940614
Alignment:
Q  360 attcaacactcattcaacttttaccct------tggtttttcattcaacactctaccccaccactttttatttcttattctt 435  Q
    |||||||||| ||||||||||||||||      | | ||||||| ||||||| ||||||||||||||||||||| |||||||    
T  1940695 attcaacacttattcaacttttaccctcttcaatagattttcatacaacactttaccccaccactttttatttcatattctt 1940614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 390 - 435
Target Start/End: Original strand, 22656752 - 22656797
Alignment:
Q  390 tttttcattcaacactctaccccaccactttttatttcttattctt 435  Q
    ||||| |||||||||||||| ||||||| |||||||||||||||||    
T  22656752 ttttttattcaacactctactccaccaccttttatttcttattctt 22656797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0100 (Bit Score: 105; Significance: 3e-52; HSPs: 1)
Name: scaffold0100
Description:

Target: scaffold0100; HSP #1
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 274 - 435
Target Start/End: Complemental strand, 30648 - 30481
Alignment:
Q  274 gaccatccccaatggttaaacacattcaacaccattcaaaatccactttttcaatttccaacactctacatcattttctctttcttattcaacactcatt 373  Q
    ||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||  |||||||| | || ||||||||| |||||||||||||| |||    
T  30648 gaccatccccaatggttaaacccattcaacaccattcaacatccactttttcaattctcaacactccatataattttctctctcttattcaacacttatt 30549  T
Q  374 caacttttaccct------tggtttttcattcaacactctaccccaccactttttatttcttattctt 435  Q
    |||||||||| ||      |||||||||||||||||||||||||||||||||||||||||||||||||    
T  30548 caacttttactctctccaatggtttttcattcaacactctaccccaccactttttatttcttattctt 30481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 100; Significance: 3e-49; HSPs: 47)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 271 - 435
Target Start/End: Original strand, 44651030 - 44651199
Alignment:
Q  271 taagaccatccccaatggttaaacacattcaacaccattcaaaatccactttttcaatttccaacactctacatcattttctctttcttattcaacactc 370  Q
    ||||||||||||||||||||     | ||||||||||||||| | |||||||||||||| ||||||||| |||||||||||||| |||||||||||||||    
T  44651030 taagaccatccccaatggtttttttctttcaacaccattcaaca-ccactttttcaattcccaacactccacatcattttctctctcttattcaacactc 44651128  T
Q  371 attcaacttttaccct------tggtttttcattcaacactctaccccaccactttttatttcttattctt 435  Q
    ||||||||||||||||      |||||||||||||||||||||||||||||||||||||||||||||||||    
T  44651129 attcaacttttaccctctccaatggtttttcattcaacactctaccccaccactttttatttcttattctt 44651199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 316 - 435
Target Start/End: Complemental strand, 44451338 - 44451213
Alignment:
Q  316 ccactttttcaatttccaacactctacatcattttctctttcttattcaacactcattcaacttttaccct------tggtttttcattcaacactctac 409  Q
    |||||||||||||| ||||||||| |||||||||||||| |||||||||||||||||||||||||||||||      |||||||||||||||||||||||    
T  44451338 ccactttttcaattcccaacactccacatcattttctctctcttattcaacactcattcaacttttaccctctccaatggtttttcattcaacactctac 44451239  T
Q  410 cccaccactttttatttcttattctt 435  Q
    ||||||||||||||||||||||||||    
T  44451238 cccaccactttttatttcttattctt 44451213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 301 - 438
Target Start/End: Original strand, 8464085 - 8464228
Alignment:
Q  301 aacaccattcaaaatccactttttcaatttccaacactctacatcattttctctttcttattcaacactcattcaacttttaccct------tggttttt 394  Q
    |||||||||||| ||||||||||||||||  |||||||| |||||||||||||| ||||||||||||||||||||| |||||| ||      ||||||||    
T  8464085 aacaccattcaacatccactttttcaattctcaacactccacatcattttctctctcttattcaacactcattcaatttttactctctccaatggttttt 8464184  T
Q  395 cattcaacactctaccccaccactttttatttcttattcttgtt 438  Q
    |||||||||||||||||||||||||| ||||| |||||||||||    
T  8464185 cattcaacactctaccccaccactttctattttttattcttgtt 8464228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 298 - 435
Target Start/End: Original strand, 41542313 - 41542454
Alignment:
Q  298 ttcaacaccattcaaaatccactttttcaatttccaacactctacatcattttctctttcttattcaacactcattcaacttttaccct------tggtt 391  Q
    ||||||| ||||||| |||||||||||||||| ||||||||| ||||||| |||||| |||||||||  |||||||||||||||| |||      |||||    
T  41542313 ttcaacatcattcaacatccactttttcaattcccaacactccacatcatattctctctcttattca--actcattcaacttttatcctctccaatggtt 41542410  T
Q  392 tttcattcaacactctaccccaccactttttatttcttattctt 435  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  41542411 tttcattcaacactctaccccaccactttttatttcttattctt 41542454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 302 - 435
Target Start/End: Original strand, 17783364 - 17783503
Alignment:
Q  302 acaccattcaaaatccactttttcaatttccaacactctacatcattttctctttcttattcaacactcattcaacttttaccct------tggtttttc 395  Q
    ||||||||||| ||||||||||| |||| |||||| || |||||||||||||| |||||||||||||||||||||||||||| ||      |||||||||    
T  17783364 acaccattcaacatccacttttttaattcccaacattccacatcattttctctctcttattcaacactcattcaacttttactctctccaatggtttttc 17783463  T
Q  396 attcaacactctaccccaccactttttatttcttattctt 435  Q
    ||||||||||||||||||||| ||||||||| ||||||||    
T  17783464 attcaacactctaccccaccattttttattttttattctt 17783503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 316 - 435
Target Start/End: Complemental strand, 643890 - 643765
Alignment:
Q  316 ccactttttcaatttccaacactctacatcattttctctttcttattcaacactcattcaacttttaccct------tggtttttcattcaacactctac 409  Q
    |||||||||||||| ||||||||| || ||||||||||| |||||||||||||||||||||| ||||||||      |||||||||||||||||||||||    
T  643890 ccactttttcaattcccaacactccacgtcattttctctctcttattcaacactcattcaacatttaccctctcaaatggtttttcattcaacactctac 643791  T
Q  410 cccaccactttttatttcttattctt 435  Q
    ||||||||||||||| ||||||||||    
T  643790 cccaccactttttatctcttattctt 643765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 296 - 435
Target Start/End: Original strand, 44334270 - 44334415
Alignment:
Q  296 cattcaacaccattcaaaatccactttttcaatttccaacactctacatcattttctctttcttattcaacactcattcaacttttaccct------tgg 389  Q
    ||||||| ||||||||| ||||||||||||||||  |||||||| |||||||||||||| |||||||||||||||||||||||||||| ||      |||    
T  44334270 cattcaataccattcaacatccactttttcaattctcaacactccacatcattttctctctcttattcaacactcattcaacttttactctctccaatgg 44334369  T
Q  390 tttttcattcaacactctaccccaccactttttatttcttattctt 435  Q
    ||||||||||| |||| |||||  ||||||||||||||||||||||    
T  44334370 tttttcattcatcactttaccctgccactttttatttcttattctt 44334415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 271 - 435
Target Start/End: Original strand, 45239095 - 45239265
Alignment:
Q  271 taagaccatccccaatggttaaacacattcaacaccattcaaaatccactttttcaatttccaacactctacatcattttctctttc-ttattcaacact 369  Q
    ||||||||||  ||||||||||||||| | || ||||||||| | |||||||||||||| ||||||||| |||||||||||||| || ||||||||||||    
T  45239095 taagaccatctacaatggttaaacacaat-aataccattcaacacccactttttcaattcccaacactccacatcattttctctctctttattcaacact 45239193  T
Q  370 cattcaacttttacc-ct----tgg-tttttcattcaacactctaccccaccactttttatttcttattctt 435  Q
    ||||||| ||||||| ||    ||| ||||||||||||||| |||||||||||| |||||||||||||||||    
T  45239194 cattcaatttttacctctccaatggttttttcattcaacaccctaccccaccaccttttatttcttattctt 45239265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 284 - 432
Target Start/End: Complemental strand, 3755128 - 3754969
Alignment:
Q  284 aatggttaaacacattcaacaccattcaaaatccactttttcaatttccaacactctacatcattttctctttcttattcaacactcattcaacttttac 383  Q
    |||||| ||| |||||||||||||||||  ||||||||||||||||  ||||||||||||||||||||||| |||||||||||| ||| |||||||||||    
T  3755128 aatggtaaaaaacattcaacaccattcagcatccactttttcaattctcaacactctacatcattttctctctcttattcaacattcaatcaacttttac 3755029  T
Q  384 cc-----------ttggtttttcattcaacactctaccccaccactttttatttcttatt 432  Q
    ||           ||  |||||||||||||||||||||||||||||||||||||| ||||    
T  3755028 cctctccaatagttttttttttcattcaacactctaccccaccactttttatttcatatt 3754969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 308 - 435
Target Start/End: Original strand, 36302975 - 36303108
Alignment:
Q  308 ttcaaaatccactttttcaatttccaacactctacatcattttctctttcttattcaacactcattcaacttttaccct------tggtttttcattcaa 401  Q
    ||||| ||||| ||||||||||| |||||||| |||| |||||||||||||||||||||||  ||||||||||||||||      |||||||||||||||    
T  36302975 ttcaacatccattttttcaattttcaacactccacattattttctctttcttattcaacacatattcaacttttaccctctccaatggtttttcattcaa 36303074  T
Q  402 cactctaccccaccactttttatttcttattctt 435  Q
    ||||| |||| ||||||||||||||| |||||||    
T  36303075 cactccaccctaccactttttatttcatattctt 36303108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 308 - 435
Target Start/End: Original strand, 48729315 - 48729448
Alignment:
Q  308 ttcaaaatccactttttcaatttccaacactctacatcattttctctttcttattcaacactcattcaacttttaccct------tggtttttcattcaa 401  Q
    ||||| ||||| |||||||||||  ||||||  |||||||||||||||||||||||||||| |||||||||||||||||      |||||||||||||||    
T  48729315 ttcaacatccattttttcaatttttaacacttcacatcattttctctttcttattcaacacacattcaacttttaccctctccaatggtttttcattcaa 48729414  T
Q  402 cactctaccccaccactttttatttcttattctt 435  Q
    |||||  ||| ||||||||||||||| |||||||    
T  48729415 cactcctccctaccactttttatttcatattctt 48729448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 283 - 435
Target Start/End: Complemental strand, 2478429 - 2478271
Alignment:
Q  283 caatggttaaacacattcaacaccattcaaaatccactttttcaatttccaacactctacatcattttctctttctt-attcaacactcattcaactttt 381  Q
    ||||||| ||||| |||||||| | ||||| | |||||||||||||| ||||||||| |||||||||||||| |||| ||||||||| | ||||| ||||    
T  2478429 caatggtaaaacaaattcaacaaccttcaacacccactttttcaattcccaacactccacatcattttctctctcttaattcaacaccctttcaattttt 2478330  T
Q  382 acc-ct----tggtttttcattcaacactctaccccaccactttttatttcttattctt 435  Q
    ||| ||    |||||||| ||||||||| |||||||||||| |||||||||||||||||    
T  2478329 acctctccaatggttttttattcaacaccctaccccaccaccttttatttcttattctt 2478271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 284 - 435
Target Start/End: Original strand, 8468293 - 8468451
Alignment:
Q  284 aatggttaaacacattcaacaccattcaaaatccactttttcaatttccaacactctacatcattttctctttctt-attcaacactcattcaactttta 382  Q
    |||||||||| |||||||||| |  |||| | |||||||||||||| ||||||||| |||||||||||||| |||| ||||||||| |||| ||||||||    
T  8468293 aatggttaaaaacattcaacaaccctcaacacccactttttcaattcccaacactccacatcattttctctctcttaattcaacacacatttaactttta 8468392  T
Q  383 cc-ct-tggt----ttttcattcaacactctaccccaccactttttatttcttattctt 435  Q
    || || || |    ||||||||||||||||||||||||||| |||||||||||||||||    
T  8468393 cctctctgatgatattttcattcaacactctaccccaccaccttttatttcttattctt 8468451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 283 - 435
Target Start/End: Complemental strand, 27630560 - 27630402
Alignment:
Q  283 caatggttaaacacattcaacaccattcaaaatccactttttcaatttccaacactctacatcattttctctttctt-attcaacactcattcaactttt 381  Q
    |||||||| |||||| | || ||||||||| | |||||||||||||| ||||||||| |||||||||| ||| |||| ||||||||||||||||| ||||    
T  27630560 caatggttcaacacaat-aataccattcaacacccactttttcaattcccaacactccacatcattttatctctcttaattcaacactcattcaattttt 27630462  T
Q  382 ac----cc--ttggtttttcattcaacactctaccccaccactttttatttcttattctt 435  Q
    ||    ||  | | ||||||||||||||| ||||||||||||||||||||||||||||||    
T  27630461 acatctccaatggttttttcattcaacaccctaccccaccactttttatttcttattctt 27630402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 319 - 435
Target Start/End: Complemental strand, 52933833 - 52933711
Alignment:
Q  319 ctttttcaatttccaacactctacatcattttctctttcttattcaacactcattcaacttttaccct------tggtttttcattcaacactctacccc 412  Q
    ||||||||||| | ||||||| || ||||||||||| |||||||||||||||||||||||||||| ||      ||||||||||||||||||||||||||    
T  52933833 ctttttcaattcctaacactccacgtcattttctctctcttattcaacactcattcaacttttacactctccaatggtttttcattcaacactctacccc 52933734  T
Q  413 accactttttatttcttattctt 435  Q
    | || ||||||||| ||||||||    
T  52933733 atcattttttattttttattctt 52933711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 319 - 435
Target Start/End: Complemental strand, 52941468 - 52941346
Alignment:
Q  319 ctttttcaatttccaacactctacatcattttctctttcttattcaacactcattcaacttttaccct------tggtttttcattcaacactctacccc 412  Q
    ||||||||||| | ||||||| || ||||||||||| |||||||||||||||||||||||||||| ||      ||||||||||||||||||||||||||    
T  52941468 ctttttcaattcctaacactccacgtcattttctctctcttattcaacactcattcaacttttacactctccaatggtttttcattcaacactctacccc 52941369  T
Q  413 accactttttatttcttattctt 435  Q
    | || ||||||||| ||||||||    
T  52941368 atcattttttattttttattctt 52941346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 306 - 432
Target Start/End: Complemental strand, 44929368 - 44929236
Alignment:
Q  306 cattcaaaatccactttttcaatttccaacactctacatcattttctctttcttattcaacactcattcaacttttaccct------tggtttttcattc 399  Q
    ||||||| ||||| ||||||||||  ||||| |  | |||||||||||| | |||||||||||||||||||||||||||||      |||||||||||||    
T  44929368 cattcaacatccattttttcaattctcaacatttcaaatcattttctctcttttattcaacactcattcaacttttaccctctccaatggtttttcattc 44929269  T
Q  400 aacactctaccccaccactttttatttcttatt 432  Q
    ||||||||||||||||| ||||||||| |||||    
T  44929268 aacactctaccccaccattttttattttttatt 44929236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 316 - 435
Target Start/End: Complemental strand, 45456219 - 45456093
Alignment:
Q  316 ccactttttcaatttccaacactctacatcattttctctttctta-ttcaacactcattcaacttttacc-ct----tgg-tttttcattcaacactcta 408  Q
    |||||||||||||| ||||||||| |||| ||||||||| ||||| |||||||||||||||| ||||||| ||    ||| |||||||||||||||||||    
T  45456219 ccactttttcaattcccaacactccacataattttctctctcttaattcaacactcattcaatttttacctctccaatggatttttcattcaacactcta 45456120  T
Q  409 ccccaccactttttatttcttattctt 435  Q
    ||||||||| |||||||||||||||||    
T  45456119 ccccaccaccttttatttcttattctt 45456093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 283 - 435
Target Start/End: Original strand, 31468102 - 31468260
Alignment:
Q  283 caatggttaaacacattcaacaccattcaaaatccactttttcaatttccaacactctacatcattttctctttctt-attcaacactcattcaactttt 381  Q
    |||||||| |||||| | || ||||||||| | |||||||||||||| ||||||||| |||||||||||||| |||| |||||||| |||||||| ||||    
T  31468102 caatggttcaacacaat-aataccattcaacacccactttttcaattcccaacactccacatcattttctctctcttaattcaacattcattcaattttt 31468200  T
Q  382 acc------cttggtttttcattcaacactctaccccaccactttttatttcttattctt 435  Q
    |||       | | ||||||||||||||| |||||||||||| |||||||||||||||||    
T  31468201 acctctccaatagttttttcattcaacaccctaccccaccaccttttatttcttattctt 31468260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 297 - 435
Target Start/End: Complemental strand, 48388195 - 48388050
Alignment:
Q  297 attcaacaccattcaaaatccactttttcaatttccaacactctacatcattttctctttctt-attcaacactcattcaacttttacc-ct----tgg- 389  Q
    |||||||| | ||||| | |||||||||||||| ||||||||| |||||||||||||| |||| ||||||||| ||||||| ||||||| ||    |||     
T  48388195 attcaacaaccttcaacacccactttttcaattcccaacactccacatcattttctctctcttaattcaacacccattcaatttttacctctccaatggt 48388096  T
Q  390 tttttcattcaacactctaccccaccactttttatttcttattctt 435  Q
    ||||||||||||||| |||||||||||| |||||||||||||||||    
T  48388095 tttttcattcaacaccctaccccaccaccttttatttcttattctt 48388050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 283 - 435
Target Start/End: Complemental strand, 37420444 - 37420286
Alignment:
Q  283 caatggttaaacacattcaacaccattcaaaatccactttttcaatttccaacactctacatcattttctctttctt-attcaacactcattcaactttt 381  Q
    |||||||| |||||| | || ||||||||| | |||||||||||||| ||||||||| |||||||||| ||| |||| ||||||||||||||||| ||||    
T  37420444 caatggttcaacacaat-aataccattcaacacccactttttcaattcccaacactccacatcattttatctctcttaattcaacactcattcaattttt 37420346  T
Q  382 ac----cc--ttggtttttcattcaacactctaccccaccactttttatttcttattctt 435  Q
    ||    ||  | | ||||||||||||||| |||||||||||| |||||||||||||||||    
T  37420345 acatctccaatggttttttcattcaacaccctaccccaccaccttttatttcttattctt 37420286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 283 - 435
Target Start/End: Original strand, 36230325 - 36230484
Alignment:
Q  283 caatggttaaacacattcaacaccattcaaaatccactttttcaatttccaacactctacatcattttctctttctt-attcaacactcattcaactttt 381  Q
    |||||||||||||||||||||| |  |||| | | |||||||||||| ||||||||  |||||||||| ||| |||| ||||||||| ||||||| ||||    
T  36230325 caatggttaaacacattcaacaaccctcaacaccaactttttcaattcccaacacttcacatcattttatctctcttaattcaacacccattcaattttt 36230424  T
Q  382 acc-ct----tgg-tttttcattcaacactctaccccaccactttttatttcttattctt 435  Q
    ||| ||    ||| |||||||||||||||||||||||| ||| |||||||||||||||||    
T  36230425 acctctccaatggttttttcattcaacactctaccccatcaccttttatttcttattctt 36230484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 332 - 427
Target Start/End: Original strand, 39149093 - 39149190
Alignment:
Q  332 caacactctacatcattttctctttcttattcaacactcattcaacttttaccctt--ggtttttcattcaacactctaccccaccactttttatttc 427  Q
    ||||||||||||||||||||||| |||||||||| | |||||||||||||| | ||  | |||||||||||||||||||||| |||||||||||||||    
T  39149093 caacactctacatcattttctctatcttattcaatattcattcaacttttatcttttagttttttcattcaacactctaccctaccactttttatttc 39149190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 317 - 435
Target Start/End: Complemental strand, 20584918 - 20584794
Alignment:
Q  317 cactttttcaatttccaacactctacatcattttctctttcttattcaacactcattcaacttttaccctt------ggtttttcattcaacactctacc 410  Q
    ||||||||||||| ||||||||| |||||||||||||  ||||||| |||||| |||||||||||| | |       | |||||||||||||||||||||    
T  20584918 cactttttcaattcccaacactccacatcattttctcactcttatttaacacttattcaacttttatcttctccaaagatttttcattcaacactctacc 20584819  T
Q  411 ccaccactttttatttcttattctt 435  Q
    ||||||| |||||||||||||||||    
T  20584818 ccaccaccttttatttcttattctt 20584794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 309 - 435
Target Start/End: Original strand, 31159381 - 31159514
Alignment:
Q  309 tcaaaatccactttttcaatttccaacactctacatcattttctctttctt-attcaacactcattcaacttttacc-ct----tgg-tttttcattcaa 401  Q
    |||| ||| |||||||||||| ||||||||| |||||||||||||| |||| ||||||||| ||||||| ||||||| ||    ||| ||||||||||||    
T  31159381 tcaacatctactttttcaattcccaacactccacatcattttctctctcttaattcaacacccattcaatttttacctctccaatggttttttcattcaa 31159480  T
Q  402 cactctaccccaccactttttatttcttattctt 435  Q
    ||| |||||||||||| |||||||||||||||||    
T  31159481 caccctaccccaccaccttttatttcttattctt 31159514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 309 - 435
Target Start/End: Complemental strand, 19578985 - 19578851
Alignment:
Q  309 tcaaaatccactttttcaatttccaacactctacatcattttctctttctt-attcaacactcattcaacttttacc------cttgg-tttttcattca 400  Q
    |||| |||||||||||||||| ||||||||| |||||||||||||| |||| ||||||||| ||||||| |||||||       |||| |||||||||||    
T  19578985 tcaacatccactttttcaattcccaacactccacatcattttctctctcttaattcaacacccattcaatttttacctctccaattggttttttcattca 19578886  T
Q  401 acactctaccccaccactttttatttcttattctt 435  Q
    |||| |||||| ||||| |||||||||||||||||    
T  19578885 acaccctaccctaccaccttttatttcttattctt 19578851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 318 - 435
Target Start/End: Original strand, 48404333 - 48404457
Alignment:
Q  318 actttttcaatttccaacactctacatcattttctctttctt-attcaacactcattcaacttttacc-ct----tg-gtttttcattcaacactctacc 410  Q
    |||||||||||| ||||||||| |||||||||||||| |||| ||||||||||||||||| ||||||| ||    ||  ||||||||||||||| |||||    
T  48404333 actttttcaattcccaacactccacatcattttctctctcttaattcaacactcattcaatttttacctctccaatgattttttcattcaacaccctacc 48404432  T
Q  411 ccaccactttttatttcttattctt 435  Q
    ||||||| |||||||||||||||||    
T  48404433 ccaccaccttttatttcttattctt 48404457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 270 - 435
Target Start/End: Complemental strand, 51494586 - 51494414
Alignment:
Q  270 ttaagaccatccccaatggttaaacacattcaacaccattcaaaatccactttttcaatttccaacactctacatcattttctctttctt-attcaacac 368  Q
    ||||||||||   ||||||| ||| | |||||||| | ||||| | ||||||||| ||||  |||||||| |||||||||||||| |||| ||||||||     
T  51494586 ttaagaccatttacaatggtaaaatatattcaacaaccttcaacacccacttttttaattctcaacactccacatcattttctctctcttaattcaacat 51494487  T
Q  369 tcattcaacttttacc-ct----tgg-tttttcattcaacactctaccccaccactttttatttcttattctt 435  Q
    |||||||| ||||||| ||    ||| ||||||||||||||| |||||||||||| |||||||||||||||||    
T  51494486 tcattcaatttttacctctccaatggttttttcattcaacaccctaccccaccacattttatttcttattctt 51494414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 297 - 435
Target Start/End: Original strand, 40500382 - 40500525
Alignment:
Q  297 attcaacaccattcaaaatccactttttcaatttccaacactctacatcattttctctttcttattcaacactcattcaacttttaccct------tggt 390  Q
    |||||||| |||| || | ||||||||||| || | ||||||  |||| ||||||||  |||||||||||||||||| ||||||||||||      ||||    
T  40500382 attcaacatcatttaacacccactttttcagttccgaacacttcacat-attttctccctcttattcaacactcatttaacttttaccctctccagtggt 40500480  T
Q  391 ttttcattcaacactctaccccaccactttttatttcttattctt 435  Q
    ||||||||||||||| || |||||||||||| |||||||||||||    
T  40500481 ttttcattcaacactttatcccaccacttttcatttcttattctt 40500525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 316 - 435
Target Start/End: Complemental strand, 30878612 - 30878485
Alignment:
Q  316 ccactttttcaatttccaacactctacatcattttctctttctt-attcaacactcattcaacttttacc-ct----tgg--tttttcattcaacactct 407  Q
    |||||||||||||||||||||||| |||||||||||||| |||| ||||||||  ||||||| ||||||| ||    | |  ||||||||||||| ||||    
T  30878612 ccactttttcaatttccaacactccacatcattttctctctcttaattcaacatccattcaatttttacctctccaatagtttttttcattcaacgctct 30878513  T
Q  408 accccaccactttttatttcttattctt 435  Q
    |||||||||| |||||||||||||||||    
T  30878512 accccaccaccttttatttcttattctt 30878485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 298 - 435
Target Start/End: Original strand, 29523686 - 29523830
Alignment:
Q  298 ttcaacaccattcaaaatccactttttcaatttccaacactctacatcattttctctttctt-attcaacactcattcaacttttac----cc--ttggt 390  Q
    ||||||||| ||||| | |||||||||||||| ||||||||| |||||||||||||| |||| ||||||||  ||||||| ||||||    ||  |   |    
T  29523686 ttcaacacccttcaacacccactttttcaattcccaacactccacatcattttctctctcttaattcaacatccattcaatttttacatctccaatgatt 29523785  T
Q  391 ttttcattcaacactctaccccaccactttttatttcttattctt 435  Q
    |||||||||||||| ||||||||| || |||||||||||||||||    
T  29523786 ttttcattcaacaccctaccccacaaccttttatttcttattctt 29523830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 318 - 435
Target Start/End: Complemental strand, 37646626 - 37646502
Alignment:
Q  318 actttttcaatttccaacactctacatcattttctctttctta-ttcaacactcattcaacttttacc-ct----tggttttt-cattcaacactctacc 410  Q
    ||||||| |||| ||||||||| |||||||||||||| ||||| |||||||| ||||||| ||||||| ||    || ||||| |||||||||| |||||    
T  37646626 acttttttaattcccaacactccacatcattttctctctcttaattcaacacccattcaatttttacctctccaatgattttttcattcaacaccctacc 37646527  T
Q  411 ccaccactttttatttcttattctt 435  Q
    ||||||| |||||||||||||||||    
T  37646526 ccaccaccttttatttcttattctt 37646502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 316 - 435
Target Start/End: Original strand, 23092770 - 23092896
Alignment:
Q  316 ccactttttcaatttccaacactctacatcattttctctttctta-ttcaacactcattcaacttttacc-ct----tggtttt-tcattcaacactcta 408  Q
    |||||||||||||| ||||||||| || ||||||||||| ||||| |||||||| ||||||  ||||||| ||    || |||| ||||||||||| |||    
T  23092770 ccactttttcaattcccaacactccacgtcattttctctctcttaattcaacacccattcagtttttacctctccaatgattttttcattcaacacccta 23092869  T
Q  409 ccccaccactttttatttcttattctt 435  Q
    ||||||||| |||||||||||||||||    
T  23092870 ccccaccaccttttatttcttattctt 23092896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 317 - 435
Target Start/End: Original strand, 37822571 - 37822697
Alignment:
Q  317 cactttttcaatttccaacactctacatcattttctctt-tctta-ttcaacactcattcaacttttacc-ct----tggttttt-cattcaacactcta 408  Q
    |||||||||||||  |||||||| ||||||||||||||  ||||| |||||||||||||||| ||||||| ||    || ||||| | ||||||||||||    
T  37822571 cactttttcaattctcaacactccacatcattttctctcctcttaattcaacactcattcaatttttacctctccaatgattttttctttcaacactcta 37822670  T
Q  409 ccccaccactttttatttcttattctt 435  Q
    ||||||||| |||||||||||||||||    
T  37822671 ccccaccaccttttatttcttattctt 37822697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 309 - 435
Target Start/End: Complemental strand, 45623605 - 45623472
Alignment:
Q  309 tcaaaatccactttttcaatttccaacactctacatcattttctctttctt-attcaacactcattcaactttta-----cccttgg-tttttcattcaa 401  Q
    |||| ||| |||||||||||| | ||||||| |||||||||||||| |||| |||||||||||||| || |||||     ||  ||| ||||||||||||    
T  45623605 tcaacatctactttttcaattcctaacactccacatcattttctctctcttaattcaacactcatttaatttttatctctcctatggttttttcattcaa 45623506  T
Q  402 cactctaccccaccactttttatttcttattctt 435  Q
    ||| ||| |||||||| |||||||||||||||||    
T  45623505 caccctatcccaccacattttatttcttattctt 45623472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 317 - 435
Target Start/End: Complemental strand, 37691357 - 37691232
Alignment:
Q  317 cactttttcaatttccaacactctacatcattttctctttctta-ttcaacactcattcaacttttacc-ct----tggttttt-cattcaacactctac 409  Q
    ||||||||||||| ||||||||| |||| ||||||||| ||||| |||||||  ||||||| ||||||| ||    |||||||| |||||||||| ||||    
T  37691357 cactttttcaattcccaacactccacattattttctctctcttaattcaacatccattcaatttttacctctccaatggttttttcattcaacaccctac 37691258  T
Q  410 cccaccactttttatttcttattctt 435  Q
     ||||||| |||||||||||||||||    
T  37691257 tccaccacattttatttcttattctt 37691232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 309 - 435
Target Start/End: Original strand, 29919364 - 29919498
Alignment:
Q  309 tcaaaatccactttttcaatttccaacactctacatcattttctctttctta-ttcaacactcattcaacttttaccct------tggtttt-tcattca 400  Q
    |||| ||| |||||||||||| ||||||||| | |||||||||||| ||||| ||||||||  |||||| ||||  |||      ||||||| |||||||    
T  29919364 tcaacatctactttttcaattcccaacactccatatcattttctctctcttaattcaacacctattcaattttttacctctccaatggttttttcattca 29919463  T
Q  401 acactctaccccaccactttttatttcttattctt 435  Q
    ||||||||||||||||  |||||||||||||||||    
T  29919464 acactctaccccaccatattttatttcttattctt 29919498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 318 - 435
Target Start/End: Original strand, 14096694 - 14096818
Alignment:
Q  318 actttttcaatttccaacactctacatcattttctctttctt-attcaacactcattcaacttttacc------cttggtttttcattcaacactctacc 410  Q
    |||||||||||| ||||||||| | |||||||| ||| |||| ||||||||||||||||| |||||||       |   ||||||||||||||| ||| |    
T  14096694 actttttcaattcccaacactccaaatcattttatctctcttaattcaacactcattcaatttttacctctccaataattttttcattcaacaccctatc 14096793  T
Q  411 ccaccactttttatttcttattctt 435  Q
    ||||||| |||||||||||||||||    
T  14096794 ccaccacattttatttcttattctt 14096818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 390 - 435
Target Start/End: Complemental strand, 17681248 - 17681203
Alignment:
Q  390 tttttcattcaacactctaccccaccactttttatttcttattctt 435  Q
    |||||||||||||||||||||||||||| |||||||||||||||||    
T  17681248 tttttcattcaacactctaccccaccaccttttatttcttattctt 17681203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 308 - 384
Target Start/End: Complemental strand, 35847197 - 35847120
Alignment:
Q  308 ttcaaaatccactttttcaatttccaacactctacatcattttctctttc-ttattcaacactcattcaacttttacc 384  Q
    ||||| ||||||||||| |||||||||||||| |||||||||||||| || | ||||||||| ||||||| |||||||    
T  35847197 ttcaacatccacttttttaatttccaacactccacatcattttctctctcataattcaacacccattcaatttttacc 35847120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 285 - 435
Target Start/End: Original strand, 43738950 - 43739107
Alignment:
Q  285 atggttaaacacattcaacaccattcaaaatccactttttcaatttccaacactctacatcattttctct-ttcttattcaacactcattcaacttttac 383  Q
    |||||||||||||||||||| | ||||  || || ||||||||||| ||||||||||| | ||||| ||| || | |||||||||| |||||| ||||||    
T  43738950 atggttaaacacattcaacaactttcagcattcattttttcaattttcaacactctacgttattttttctcttttaattcaacacttattcaatttttac 43739049  T
Q  384 c-ctt-----ggtttttcattcaacactctaccccaccactttttatttcttattctt 435  Q
    | |||     | ||||||||| |||||||||| ||| ||| |||||||||| ||||||    
T  43739050 ctcttaaatggttttttcatttaacactctactccatcaccttttatttctcattctt 43739107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 316 - 435
Target Start/End: Original strand, 33164413 - 33164539
Alignment:
Q  316 ccactttttcaatttccaacactctacatcattttctctttctta-ttcaacactcattcaacttttac-----ccttggtttt-tcattcaacactcta 408  Q
    |||||||||||||| |||||| || | || ||||| ||| ||||| |||||||||||||||| ||||||     |  || |||| ||||||||||| |||    
T  33164413 ccactttttcaattcccaacattccagattattttatctctcttaattcaacactcattcaatttttacatctccaatgattttttcattcaacacccta 33164512  T
Q  409 ccccaccactttttatttcttattctt 435  Q
    ||||||||| |||||||||||||||||    
T  33164513 ccccaccaccttttatttcttattctt 33164539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 390 - 435
Target Start/End: Original strand, 45362789 - 45362834
Alignment:
Q  390 tttttcattcaacactctaccccaccactttttatttcttattctt 435  Q
    ||||||||||||||| |||||||||||| |||||||||||||||||    
T  45362789 tttttcattcaacaccctaccccaccaccttttatttcttattctt 45362834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 319 - 386
Target Start/End: Original strand, 51520221 - 51520289
Alignment:
Q  319 ctttttcaatttccaacactctacatcattttctctttctt-attcaacactcattcaacttttaccct 386  Q
    |||||||||||| |||||||| |||||||||| ||| |||| ||| |||||| ||||||||||||||||    
T  51520221 ctttttcaattttcaacactccacatcattttttctctcttaattaaacacttattcaacttttaccct 51520289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 390 - 433
Target Start/End: Complemental strand, 51156875 - 51156832
Alignment:
Q  390 tttttcattcaacactctaccccaccactttttatttcttattc 433  Q
    ||||||||||||||| |||||||||||| |||||||||||||||    
T  51156875 tttttcattcaacaccctaccccaccaccttttatttcttattc 51156832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 390 - 435
Target Start/End: Complemental strand, 10266947 - 10266902
Alignment:
Q  390 tttttcattcaacactctaccccaccactttttatttcttattctt 435  Q
    |||||||||||||||||||| ||||||| |||||||| ||||||||    
T  10266947 tttttcattcaacactctactccaccacattttatttattattctt 10266902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 390 - 434
Target Start/End: Complemental strand, 47300484 - 47300440
Alignment:
Q  390 tttttcattcaacactctaccccaccactttttatttcttattct 434  Q
    |||||||||||||||||||| ||||||  ||||||||||||||||    
T  47300484 tttttcattcaacactctactccaccatcttttatttcttattct 47300440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 88; Significance: 4e-42; HSPs: 54)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 308 - 432
Target Start/End: Complemental strand, 39049159 - 39049029
Alignment:
Q  308 ttcaaaatccactttttcaatttccaacactctacatcattttctctttcttattcaacactcattcaacttttaccct------tggtttttcattcaa 401  Q
    ||||| ||||||||||| |||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||      |||||||||||||||    
T  39049159 ttcaacatccacttttttaatttccaacactccacatcattttctctttcttattcaacattcattcaacttttaccctctccgatggtttttcattcaa 39049060  T
Q  402 cactctaccccaccactttttatttcttatt 432  Q
    |||||||||||||||||||||||||| ||||    
T  39049059 cactctaccccaccactttttatttcatatt 39049029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 320 - 435
Target Start/End: Complemental strand, 31848838 - 31848717
Alignment:
Q  320 tttttcaatttccaacactctacatcattttctctttcttattcaacactcattcaacttttaccct------tggtttttcattcaacactctacccca 413  Q
    |||||||||||||||||||| |||||||||||||| |||||||||||||||||||||| ||||||||      |||||||||||||||||||||||||||    
T  31848838 tttttcaatttccaacactccacatcattttctctctcttattcaacactcattcaacatttaccctctccaatggtttttcattcaacactctacccca 31848739  T
Q  414 ccactttttatttcttattctt 435  Q
    ||||||||||| ||||||||||    
T  31848738 ccactttttatctcttattctt 31848717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 283 - 435
Target Start/End: Complemental strand, 39113856 - 39113698
Alignment:
Q  283 caatggttaaacacattcaacaccattcaaaatccactttttcaatttccaacactctacatcattttctctttcttattcaacactcattcaactttta 382  Q
    ||||||| ||| |||||||||| || |||| |   |||||||||||| ||||||||| |||||||||||||| | |||||||||||||||||||||||||    
T  39113856 caatggtgaaaaacattcaacaacactcaacactaactttttcaattcccaacactccacatcattttctctcttttattcaacactcattcaactttta 39113757  T
Q  383 ccct------tggtttttcattcaacactctaccccaccactttttatttcttattctt 435  Q
    || |      ||||||||||||||||||||||||||||||||||||||||| |||||||    
T  39113756 ccattttcaatggtttttcattcaacactctaccccaccactttttatttcatattctt 39113698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 273 - 435
Target Start/End: Complemental strand, 47750335 - 47750169
Alignment:
Q  273 agaccatccccaatggttaaacacattcaacaccattcaaaatccactttttcaatttccaacactctacatcattttctctttcttattcaacactcat 372  Q
    |||| ||||||||||||| |   ||||||||||||||||| |||||||||||||||| ||| ||||| || ||||||||||| |||||||||||||||||    
T  47750335 agacaatccccaatggtttataccattcaacaccattcaacatccactttttcaattccca-cactccacgtcattttctctctcttattcaacactcat 47750237  T
Q  373 tcaacttttaccct------tggtttttcattcaacactctaccccaccactttttatttcttattctt 435  Q
    ||||||||||||||      || ||||||||||||||||||| ||||||| ||||||||| ||||||||    
T  47750236 tcaacttttaccctctccaatgatttttcattcaacactcta-cccaccattttttattttttattctt 47750169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 316 - 432
Target Start/End: Complemental strand, 53184164 - 53184042
Alignment:
Q  316 ccactttttcaatttccaacactctacatcattttctctttcttattcaacactcattcaacttttaccct------tggtttttcattcaacactctac 409  Q
    |||||||||||||| ||||||||  |||||||||||||| ||||||||||||||||||||||||| |||||      |||||||||||||||||||||||    
T  53184164 ccactttttcaattcccaacacttcacatcattttctctctcttattcaacactcattcaactttaaccctctccaatggtttttcattcaacactctac 53184065  T
Q  410 cccaccactttttatttcttatt 432  Q
    ||||||||||||||||| |||||    
T  53184064 cccaccactttttattttttatt 53184042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 283 - 435
Target Start/End: Complemental strand, 23540527 - 23540368
Alignment:
Q  283 caatggttaaacacattcaacaccattcaaaatccactttttcaatttccaacactctacatcattttctctttctt-attcaacactcattcaactttt 381  Q
    ||||||||||||| |||||||| | ||||| | |||||||||||||||||||||||| |||||||||||||| |||| ||||||||| ||||||| ||||    
T  23540527 caatggttaaacatattcaacaaccttcaacacccactttttcaatttccaacactcaacatcattttctctctcttaattcaacacccattcaattttt 23540428  T
Q  382 acc-ct----tg-gtttttcattcaacactctaccccaccactttttatttcttattctt 435  Q
    ||| ||    ||  |||||||||||||||||||||||||||| |||||||||||||||||    
T  23540427 acctctccaatgattttttcattcaacactctaccccaccaccttttatttcttattctt 23540368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 308 - 435
Target Start/End: Complemental strand, 54356972 - 54356839
Alignment:
Q  308 ttcaaaatccactttttcaatttccaacactctacatcattttctctttcttattcaacactcattcaacttttaccct------tggtttttcattcaa 401  Q
    ||||| |||||||||||||||| ||||||||| |||||||||||| | ||||||||||||| |||||||||||||| ||      |||||||||||||||    
T  54356972 ttcaacatccactttttcaattcccaacactccacatcattttctttctcttattcaacacacattcaacttttactctctctaatggtttttcattcaa 54356873  T
Q  402 cactctaccccaccactttttatttcttattctt 435  Q
    ||||||||| |||||| |||||||||||||||||    
T  54356872 cactctacctcaccaccttttatttcttattctt 54356839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 304 - 435
Target Start/End: Original strand, 10089840 - 10089976
Alignment:
Q  304 accattcaaaatccactttttcaatttccaacactctacatcattttctctttcttattcaacactcattcaacttttaccct------tggtttttcat 397  Q
    ||||||||| | ||||||||||||||| ||| |||| |||||||||| ||| |||||||||||||||||||||||||||||||      || ||||||||    
T  10089840 accattcaacacccactttttcaattttcaatactccacatcatttt-tctctcttattcaacactcattcaacttttaccctctccaatgatttttcat 10089938  T
Q  398 tcaacactctaccccaccactttttatttcttattctt 435  Q
    ||||||||||||||||||| ||||||||| ||||||||    
T  10089939 tcaacactctaccccaccattttttattttttattctt 10089976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 306 - 435
Target Start/End: Original strand, 19409125 - 19409260
Alignment:
Q  306 cattcaaaatccactttttcaatttccaacactctacatcattttctctttcttattcaacactcattcaactttta------cccttggtttttcattc 399  Q
    ||||||| | ||||||||||||||||||| |||| |||| ||||||||| |||||||||| | ||||||||||||||      ||  |||||||||||||    
T  19409125 cattcaacacccactttttcaatttccaaaactcaacattattttctctctcttattcaatattcattcaacttttatcatctccaatggtttttcattc 19409224  T
Q  400 aacactctaccccaccactttttatttcttattctt 435  Q
    |||||||| |||||||||||||||||||||||||||    
T  19409225 aacactcttccccaccactttttatttcttattctt 19409260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 302 - 435
Target Start/End: Complemental strand, 40596844 - 40596705
Alignment:
Q  302 acaccattcaaaatccactttttcaatttccaacactctacatcattttctctttcttattcaacactcattcaacttttaccct------tggtttttc 395  Q
    ||||||||||| || || ||||||||||| |||||||| || ||||||||||| | |||||||||||| ||||||||||||| ||      |||||||||    
T  40596844 acaccattcaagattcattttttcaattttcaacactccacgtcattttctctcttttattcaacacttattcaacttttactctctccaatggtttttc 40596745  T
Q  396 attcaacactctaccccaccactttttatttcttattctt 435  Q
    ||||||||||||||||||||| ||||||||| ||||||||    
T  40596744 attcaacactctaccccaccattttttattttttattctt 40596705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 308 - 435
Target Start/End: Original strand, 12158134 - 12158267
Alignment:
Q  308 ttcaaaatccactttttcaatttccaacactctacatcattttctctttcttattcaacactcattcaacttttaccct------tggtttttcattcaa 401  Q
    ||||| |||||| ||||| ||| ||||||||| |||||||||||||| ||||||||||||||||||||||||||| | |      |||||||||||||||    
T  12158134 ttcaacatccacattttcgattcccaacactccacatcattttctctctcttattcaacactcattcaacttttatctttttcaatggtttttcattcaa 12158233  T
Q  402 cactctaccccaccactttttatttcttattctt 435  Q
    ||||||||| ||||| ||||||||| ||||||||    
T  12158234 cactctacctcaccattttttattttttattctt 12158267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 283 - 435
Target Start/End: Complemental strand, 34199370 - 34199211
Alignment:
Q  283 caatggttaaacacattcaacaccattcaaaatccactttttcaatttccaacactctacatcattttctctttctt-attcaacactcattcaactttt 381  Q
    ||||||| ||| |||||||||| | ||||| |||||||||||||||| ||||||||| |||||||||||||| |||| ||||||||| ||||||| ||||    
T  34199370 caatggtaaaatacattcaacaaccttcaacatccactttttcaattcccaacactccacatcattttctctctcttaattcaacacccattcaattttt 34199271  T
Q  382 acc-ct----tg-gtttttcattcaacactctaccccaccactttttatttcttattctt 435  Q
    ||| ||    ||  ||||||||||||||| |||||||||||| |||||||||||||||||    
T  34199270 acctctccaatgattttttcattcaacaccctaccccaccaccttttatttcttattctt 34199211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 316 - 435
Target Start/End: Complemental strand, 39533349 - 39533224
Alignment:
Q  316 ccactttttcaatttccaacactctacatcattttctctttcttattcaacactcattcaacttttaccct------tggtttttcattcaacactctac 409  Q
    ||||||||||||||||||| | || || |||||||||||||||||||||||| |||||||||||||||| |      || ||||||||||||||||||||    
T  39533349 ccactttttcaatttccaatattccacgtcattttctctttcttattcaacattcattcaacttttaccatctacaatgatttttcattcaacactctac 39533250  T
Q  410 cccaccactttttatttcttattctt 435  Q
    |||||||  |||||||||||||||||    
T  39533249 cccaccatcttttatttcttattctt 39533224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 283 - 435
Target Start/End: Complemental strand, 3618554 - 3618396
Alignment:
Q  283 caatggttaaacacattcaacaccattcaaaatccactttttcaatttccaacactctacatcattttctctttctt-attcaacactcattcaactttt 381  Q
    ||||||| ||||| |||||||| | ||||| | |||||||||||||| ||||||||| |||||||||||||| |||| ||||||||| | ||||| ||||    
T  3618554 caatggtaaaacaaattcaacaaccttcaacacccactttttcaattcccaacactccacatcattttctctctcttaattcaacaccctttcaattttt 3618455  T
Q  382 acc-ct----tggtttttcattcaacactctaccccaccactttttatttcttattctt 435  Q
    ||| ||    |||||||| ||||||||| |||||||||||| |||||||||||||||||    
T  3618454 acctctccaatggttttttattcaacaccctaccccaccaccttttatttcttattctt 3618396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 283 - 435
Target Start/End: Complemental strand, 33077974 - 33077816
Alignment:
Q  283 caatggttaaacacattcaacaccattcaaaatccactttttcaatttccaacactctacatcattttctctttcttattcaacactcattcaactttta 382  Q
    ||||||| ||||| |||||||| |  |||| |||||||||||||||||||||||||| |||||||||||||| | | ||| ||||| ||||||| |||||    
T  33077974 caatggtaaaacaaattcaacaaccctcaatatccactttttcaatttccaacactccacatcattttctctctttaatttaacacccattcaattttta 33077875  T
Q  383 cc-ct----tgg-tttttcattcaacactctaccccaccactttttatttcttattctt 435  Q
    || ||    ||| ||||||||||||||| |||||||||||| |||||||||||||||||    
T  33077874 cctctccaatggttttttcattcaacaccctaccccaccaccttttatttcttattctt 33077816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 284 - 435
Target Start/End: Original strand, 40721007 - 40721165
Alignment:
Q  284 aatggttaaacacattcaacaccattcaaaatccactttttcaatttccaacactctacatcattttctctttctt-attcaacactcattcaactttta 382  Q
    |||||| ||| ||||||||||  |||||| | |||||||||||||| ||||||||| |||||||||||||| |||| ||||||||| ||||||| |||||    
T  40721007 aatggtaaaatacattcaacaatattcaacacccactttttcaattcccaacactccacatcattttctctctcttaattcaacacccattcaattttta 40721106  T
Q  383 cc-ct----tgg-tttttcattcaacactctaccccaccactttttatttcttattctt 435  Q
    || ||    ||| ||||||||||||||| |||||||||||| |||||||||||||||||    
T  40721107 cctctccaatggttttttcattcaacaccctaccccaccaccttttatttcttattctt 40721165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 283 - 435
Target Start/End: Complemental strand, 48506707 - 48506548
Alignment:
Q  283 caatggttaaacacattcaacaccattcaaaatccactttttcaatttccaacactctacatcattttctctttctt-attcaacactcattcaactttt 381  Q
    ||||||| ||||| |||||||| |  |||| ||||||||||||||||| |||||||| |||||||||||||| |||| ||||||||||||||||| ||||    
T  48506707 caatggtaaaacaaattcaacaaccctcaacatccactttttcaattttcaacactccacatcattttctctctcttaattcaacactcattcaattttt 48506608  T
Q  382 a-----cccttgg-tttttcattcaacactctaccccaccactttttatttcttattctt 435  Q
    |     ||  ||| |||||||| ||||||||||||||||||| |||||||| ||||||||    
T  48506607 aactctccaatggttttttcatgcaacactctaccccaccaccttttattttttattctt 48506548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 283 - 435
Target Start/End: Original strand, 6290571 - 6290730
Alignment:
Q  283 caatggttaaacacattcaacaccattcaaaatccactttttcaatttccaacactctacatcattttctctttctt-attcaacactcattcaactttt 381  Q
    ||||||| ||| |||||||||| | ||||| | |||||||||||||| ||||||||| |||||||||||||| |||| ||||||||| ||||||| ||||    
T  6290571 caatggtaaaatacattcaacaaccttcaacacccactttttcaattcccaacactccacatcattttctctctcttaattcaacacccattcaattttt 6290670  T
Q  382 acc-ct----tgg-tttttcattcaacactctaccccaccactttttatttcttattctt 435  Q
    ||| ||    ||| ||||||||||||||| ||| |||||||| |||||||||||||||||    
T  6290671 acctctccaatggttttttcattcaacaccctatcccaccaccttttatttcttattctt 6290730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 283 - 435
Target Start/End: Original strand, 28899303 - 28899462
Alignment:
Q  283 caatggttaaacacattcaacaccattcaaaatccactttttcaatttccaacactctacatcattttctctttctt-attcaacactcattcaactttt 381  Q
    |||||||||||||||||||||| |  |||| | |||||||||||||| |||| | || ||||| |||||||| |||| ||||||||| ||||||| ||||    
T  28899303 caatggttaaacacattcaacaaccctcaacacccactttttcaattcccaatattccacatcgttttctctctcttaattcaacacccattcaattttt 28899402  T
Q  382 acc-ct----tgg-tttttcattcaacactctaccccaccactttttatttcttattctt 435  Q
    ||| ||    ||| |||||||||||||||||||||||||||| |||||||||||||||||    
T  28899403 acctctctaatggttttttcattcaacactctaccccaccaccttttatttcttattctt 28899462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 283 - 435
Target Start/End: Complemental strand, 46917611 - 46917453
Alignment:
Q  283 caatggttaaacacattcaacaccattcaaaatccactttttcaatttccaacactctacatcattttctctttctt-attcaacactcattcaactttt 381  Q
    |||||||| |||||| | || ||||||||| | |||||||||||||| ||||||||| |||||||||||||| |||| ||||||||| ||||||| ||||    
T  46917611 caatggttcaacacaat-aataccattcaacacccactttttcaattcccaacactccacatcattttctctctcttaattcaacacccattcaattttt 46917513  T
Q  382 acc-ct----tgg-tttttcattcaacactctaccccaccactttttatttcttattctt 435  Q
    ||| ||    ||| ||||||||||||||| |||||||||||| |||||||||||||||||    
T  46917512 acctctccaatggttttttcattcaacaccctaccccaccaccttttatttcttattctt 46917453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 304 - 435
Target Start/End: Complemental strand, 2215362 - 2215224
Alignment:
Q  304 accattcaaaatccactttttcaatttccaacactctacatcattttctctttctt-attcaacactcattcaacttttacc-ct----tgg-tttttca 396  Q
    ||||||||| | |||||||||||||| ||||||||| |||| ||||||||| |||| ||||||||||||||||| ||||||| ||    ||| |||||||    
T  2215362 accattcaacacccactttttcaattcccaacactccacataattttctctctcttaattcaacactcattcaatttttacctctccaatggttttttca 2215263  T
Q  397 ttcaacactctaccccaccactttttatttcttattctt 435  Q
    |||||||| |||||||||||| |||||||||||||||||    
T  2215262 ttcaacaccctaccccaccaccttttatttcttattctt 2215224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 297 - 435
Target Start/End: Complemental strand, 3533394 - 3533249
Alignment:
Q  297 attcaacaccattcaaaatccactttttcaatttccaacactctacatcattttctctttctt-attcaacactcattcaacttttacc-ct----tgg- 389  Q
    |||||||| | ||||| | |||||||||||||| ||||||||| |||||||||||||| |||| ||||||||| ||||||| ||||||| ||    |||     
T  3533394 attcaacaaccttcaacacccactttttcaattcccaacactccacatcattttctctctcttaattcaacacccattcaatttttacctctccaatggt 3533295  T
Q  390 tttttcattcaacactctaccccaccactttttatttcttattctt 435  Q
    ||||||||||||||| |||||||||||| |||||||||||||||||    
T  3533294 tttttcattcaacaccctaccccaccaccttttatttcttattctt 3533249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 306 - 435
Target Start/End: Original strand, 33526711 - 33526846
Alignment:
Q  306 cattcaaaatccactttttcaatttccaacactctacatcattttctctttcttattcaacactcattcaacttttaccct------tggtttttcattc 399  Q
    ||||||| ||||||||||||||||  ||||||||   |||||||||| | | |||||||| ||||||||||||||||||||      |  ||||||||||    
T  33526711 cattcaacatccactttttcaattctcaacactccgtatcattttctttcttttattcaatactcattcaacttttaccctctccaataatttttcattc 33526810  T
Q  400 aacactctaccccaccactttttatttcttattctt 435  Q
    |||||| |||||||||||||||||||||||||||||    
T  33526811 aacactttaccccaccactttttatttcttattctt 33526846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 296 - 435
Target Start/End: Original strand, 51392215 - 51392358
Alignment:
Q  296 cattcaacaccattcaaaatccactttttcaatttccaacactctacatcattttctctttcttattcaacactcattcaacttttaccct------tgg 389  Q
    |||||||||  |||||| |  |||||||| ||||  |||||||| |||||||||| |||  ||||||||||| || |||||||||||||||      |||    
T  51392215 cattcaacattattcaacacacacttttttaattctcaacactccacatcattttttct--cttattcaacattcgttcaacttttaccctcttcaatgg 51392312  T
Q  390 tttttcattcaacactctaccccaccactttttatttcttattctt 435  Q
    |||||||||||||||| |||||||||||||||||||||||||||||    
T  51392313 tttttcattcaacactttaccccaccactttttatttcttattctt 51392358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 296 - 435
Target Start/End: Complemental strand, 56003 - 55859
Alignment:
Q  296 cattcaacaccattcaaaatccactttttcaatttccaacactctacatcattttctctttcttattcaacactcattcaacttttaccct------tgg 389  Q
    |||||||||||||| || |  |||||||||||||||||||||||  ||||||||||| | |||||||||||  ||||| |||||||| | |      |||    
T  56003 cattcaacaccattgaacactcactttttcaatttccaacactccgcatcattttctttctcttattcaactttcatt-aacttttatcatcttcaatgg 55905  T
Q  390 tttttcattcaacactctaccccaccactttttatttcttattctt 435  Q
    |||||||||||||||||||| | |||||||||||||||||||||||    
T  55904 tttttcattcaacactctactcaaccactttttatttcttattctt 55859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 295 - 435
Target Start/End: Original strand, 8991766 - 8991913
Alignment:
Q  295 acattcaacaccattcaaaatccactttttcaatttccaacactctacatcattttctctttctt-attcaacactcattcaacttttacc-ct----tg 388  Q
    |||||||||| | ||||| | ||||||||| |||| ||||||||| |||||||||||||| |||| ||||||||| ||||||| ||||||| ||    ||    
T  8991766 acattcaacaaccttcaacacccactttttgaattcccaacactccacatcattttctctctcttaattcaacacccattcaatttttacctctccaatg 8991865  T
Q  389 g-tttttcattcaacactctaccccaccactttttatttcttattctt 435  Q
    | ||||||||||||||| |||||||||||| |||||||||||||||||    
T  8991866 gttttttcattcaacaccctaccccaccaccttttatttcttattctt 8991913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 317 - 435
Target Start/End: Complemental strand, 55408636 - 55408511
Alignment:
Q  317 cactttttcaatttccaacactctacatcattttctctttcttattcaacactcattcaacttttac-----cc--ttggtttttcattcaacactctac 409  Q
    |||||||||  || ||| ||||| |||||||||||||| ||||||||||||||||||||||||||||     ||  | | ||||||||||||||||||||    
T  55408636 cactttttctcttcccagcactccacatcattttctctctcttattcaacactcattcaacttttactatctccaatagttttttcattcaacactctac 55408537  T
Q  410 cccaccactttttatttcttattctt 435  Q
    |||||||||||||||||| |||||||    
T  55408536 cccaccactttttatttcatattctt 55408511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 316 - 435
Target Start/End: Original strand, 33604661 - 33604787
Alignment:
Q  316 ccactttttcaatttccaacactctacatcattttctctttctt-attcaacactcattcaacttttacc-ct----tgg-tttttcattcaacactcta 408  Q
    |||||||||||||| ||||||||| |||||||||||||| |||| ||||||||||||||||| ||||||| ||    ||| ||||||||||||| |||||    
T  33604661 ccactttttcaattcccaacactccacatcattttctctatcttaattcaacactcattcaatttttacctctccaatggttttttcattcaactctcta 33604760  T
Q  409 ccccaccactttttatttcttattctt 435  Q
     |||||||| |||||||||||||||||    
T  33604761 tcccaccaccttttatttcttattctt 33604787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 298 - 435
Target Start/End: Complemental strand, 45081498 - 45081353
Alignment:
Q  298 ttcaacaccattcaaaatccactttttcaatttccaacactctacatcattttctctttc-ttattcaacactcattcaacttttacc-ct----tgg-- 389  Q
    ||||| ||| ||||| | |||||||||||||| ||||||||| |||||||||||||| || | ||||||||||||||||| ||||||| ||    |||      
T  45081498 ttcaatacccttcaacacccactttttcaattcccaacactccacatcattttctctctcataattcaacactcattcaatttttacctctccaatggtt 45081399  T
Q  390 tttttcattcaacactctaccccaccactttttatttcttattctt 435  Q
    ||||||||||||||| |||||||||||| |||||||||||||||||    
T  45081398 tttttcattcaacaccctaccccaccaccttttatttcttattctt 45081353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 314 - 435
Target Start/End: Complemental strand, 53348131 - 53348003
Alignment:
Q  314 atccactttttcaatttccaacactctacatcattttctctttctt-attcaacactcattcaacttttaccct------tggtttttcattcaacactc 406  Q
    ||||||||||||||||  ||||| |  |||||||||||||| |||| |||||||| ||||| ||||||||||||      || ||||||||||||||| |    
T  53348131 atccactttttcaattatcaacatttcacatcattttctctctctttattcaacagtcatttaacttttaccctctccaatgatttttcattcaacaccc 53348032  T
Q  407 taccccaccactttttatttcttattctt 435  Q
    |||||||||||||||||||||||||||||    
T  53348031 taccccaccactttttatttcttattctt 53348003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 283 - 435
Target Start/End: Original strand, 56053988 - 56054146
Alignment:
Q  283 caatggttaaacacattcaacaccattcaaaatccactttttcaatttccaacactctacatcattttctctttctt-attcaacactcattcaactttt 381  Q
    ||||||||||||| |||||||| |  | || |||||||||||||||| ||||||||| |||||||||||||| |||| |||| |||| ||||||| ||||    
T  56053988 caatggttaaacatattcaacaacccttaacatccactttttcaattcccaacactccacatcattttctctctcttaattctacacccattcaattttt 56054087  T
Q  382 accct----tg-gtttttcattcaacactctaccccaccactttttatttcttattctt 435  Q
     | ||    ||  |||||||||||||||||||||||||||| ||||| |||||||||||    
T  56054088 cctctccaatgattttttcattcaacactctaccccaccaccttttaattcttattctt 56054146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 334 - 435
Target Start/End: Original strand, 36656580 - 36656687
Alignment:
Q  334 acactctacatcattttctctttcttattcaacactcattcaacttttaccct------tggtttttcattcaacactctaccccaccactttttatttc 427  Q
    |||||| |||||||||||||| ||||| |||| ||||||||||||||||| ||      || |||||||||||||||||||| |||||||||||||||||    
T  36656580 acactccacatcattttctctctcttaatcaatactcattcaacttttacactctccgatgatttttcattcaacactctactccaccactttttatttc 36656679  T
Q  428 ttattctt 435  Q
    ||||||||    
T  36656680 ttattctt 36656687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 309 - 435
Target Start/End: Complemental strand, 55560554 - 55560421
Alignment:
Q  309 tcaaaatccactttttcaatttccaacactctacatcattttctctttctt-attcaacactcattcaacttttacc-ct----tgg-tttttcattcaa 401  Q
    |||| |||||||||||||||| ||||||||| |||||||||||||| |||| |||||||||  |||||| ||||||| ||    ||| ||||||||||||    
T  55560554 tcaacatccactttttcaattcccaacactccacatcattttctctctcttaattcaacacctattcaatttttacctctccaatggttttttcattcaa 55560455  T
Q  402 cactctaccccaccactttttatttcttattctt 435  Q
    ||| |||||||||||| |||||||||||||||||    
T  55560454 caccctaccccaccacattttatttcttattctt 55560421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 316 - 432
Target Start/End: Original strand, 38173559 - 38173682
Alignment:
Q  316 ccactttttcaatttccaacactctacatcattttctctttctt-attcaacactcattcaacttttacc-ct----tgg-tttttcattcaacactcta 408  Q
    |||||||||||||| ||||||||| |||||||||||||| |||| ||||||||||||| ||| ||||||| ||    ||| ||||||||||||||| |||    
T  38173559 ccactttttcaattcccaacactccacatcattttctctctcttaattcaacactcatccaatttttacctctccaatggttttttcattcaacacccta 38173658  T
Q  409 ccccaccactttttatttcttatt 432  Q
    ||||||||| ||||||||||||||    
T  38173659 ccccaccaccttttatttcttatt 38173682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 284 - 435
Target Start/End: Original strand, 16020819 - 16020977
Alignment:
Q  284 aatggttaaacacattcaacaccattcaaaatccactttttcaatttccaacactctacatcattttctctttctt-attcaacactcattcaactttta 382  Q
    |||||||  ||| |||||||| | ||||| | |||||||||||||| ||||||||| |||| ||||||||| |||| ||||||||  ||||||| |||||    
T  16020819 aatggttccacaaattcaacaaccttcaacacccactttttcaattcccaacactccacattattttctctctcttaattcaacatccattcaattttta 16020918  T
Q  383 cc-ct----tgg-tttttcattcaacactctaccccaccactttttatttcttattctt 435  Q
    || ||    ||| ||||||||||||||| |||||||||||| |||||||||||||||||    
T  16020919 cctctccaatggttttttcattcaacaccctaccccaccaccttttatttcttattctt 16020977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 270 - 347
Target Start/End: Original strand, 35394874 - 35394951
Alignment:
Q  270 ttaagaccatccccaatggttaaacacattcaacaccattcaaaatccactttttcaatttccaacactctacatcat 347  Q
    ||||||||||||||||| ||||||||||||||||||||||||| |  ||| ||||||||||||||||||| |||||||    
T  35394874 ttaagaccatccccaatagttaaacacattcaacaccattcaacacacaccttttcaatttccaacactccacatcat 35394951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 298 - 435
Target Start/End: Complemental strand, 48403986 - 48403841
Alignment:
Q  298 ttcaacaccattcaaaatccactttttcaatttccaacactctacatcattttctctttc-ttattcaacactcattcaacttttacc-ct----tggtt 391  Q
    ||||| ||| ||||| || ||||||||||||||||||||||| |||||||||||||| || | ||||||||||||||||| ||||||| ||    || ||    
T  48403986 ttcaatacccttcaacattcactttttcaatttccaacactccacatcattttctctctcataattcaacactcattcaatttttacctctccaatgatt 48403887  T
Q  392 ttt--cattcaacactctaccccaccactttttatttcttattctt 435  Q
    |||  |||||||||| ||||||| |||| |||||||||||||||||    
T  48403886 ttttccattcaacaccctaccccgccaccttttatttcttattctt 48403841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 317 - 433
Target Start/End: Complemental strand, 18469435 - 18469312
Alignment:
Q  317 cactttttcaatttccaacactctacatcattttct-ctttctta-ttcaacactcattcaacttttacc-ct----tggtttttcattcaacactctac 409  Q
    ||||||||||||| ||||||||| |||||||||| | || ||||| |||||||  ||||||| ||||||| ||    |||||||||||||||||||||||    
T  18469435 cactttttcaattcccaacactccacatcatttttttctctcttaattcaacatccattcaatttttacctctccaatggtttttcattcaacactctac 18469336  T
Q  410 cccaccactttttatttcttattc 433  Q
    |||||||| |||||||||||||||    
T  18469335 cccaccaccttttatttcttattc 18469312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 296 - 435
Target Start/End: Original strand, 34564108 - 34564253
Alignment:
Q  296 cattcaacaccattcaaaatccactttttcaatttccaacactctacatcattttctctttcttattcaacactcattcaacttttaccct------tgg 389  Q
    |||||||||  |||||| ||||| ||||| ||||  ||||||| || || ||||||||| |||||||||||| ||||| ||||||||||||      |||    
T  34564108 cattcaacattattcaacatccatttttttaattctcaacactttatattattttctctctcttattcaacattcatttaacttttaccctcttcaatgg 34564207  T
Q  390 tttttcattcaacactctaccccaccactttttatttcttattctt 435  Q
    ||||| |||||||| | ||| ||| |||||||||||||||||||||    
T  34564208 ttttttattcaacattttactccatcactttttatttcttattctt 34564253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 291 - 435
Target Start/End: Complemental strand, 16175108 - 16174957
Alignment:
Q  291 aaacacattcaacaccattcaaaatccactttttcaatttccaacactctacatcattttctctttctta-ttcaacactcattcaacttttaccctt-- 387  Q
    ||||| |||||||| | ||||| | ||| ||||||||||| |||||||| |||||||||||||  ||||| |||||||| | ||||| |||||||  |      
T  16175108 aaacaaattcaacaaccttcaacacccattttttcaattttcaacactccacatcattttctcactcttaattcaacaccctttcaatttttacctctcc 16175009  T
Q  388 ----ggtttttcattcaacactctaccccaccactttttatttcttattctt 435  Q
        | ||||||||||||||| |||||||||||| |||||||||||||||||    
T  16175008 aatagttttttcattcaacaccctaccccaccaccttttatttcttattctt 16174957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 298 - 435
Target Start/End: Complemental strand, 13094476 - 13094332
Alignment:
Q  298 ttcaacaccattcaaaatccactttttcaatttccaacactctacatcattttctctttctta-ttcaacactcattcaacttttaccctt------ggt 390  Q
    ||||| ||| ||||| | ||| |||||||||| ||||||||| |||||||||||||| || || |||||||| ||||||| ||||| |  |      | |    
T  13094476 ttcaatacccttcaacacccattttttcaattcccaacactccacatcattttctctctcataattcaacacccattcaatttttatctctccaatagtt 13094377  T
Q  391 ttttcattcaacactctaccccaccactttttatttcttattctt 435  Q
    |||||||||||||| |||||||||||| |||||||||||||||||    
T  13094376 ttttcattcaacaccctaccccaccaccttttatttcttattctt 13094332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 316 - 435
Target Start/End: Original strand, 13110565 - 13110691
Alignment:
Q  316 ccactttttcaatttccaacactctacatcattttctctttctt-attcaacactcattcaacttttacc-ct----tgg-tttttcattcaacactcta 408  Q
    |||||||||||||| ||||||||| ||| |||||| ||| |||| ||||||||| ||||||| ||||||| ||    ||| ||||||||||||||| |||    
T  13110565 ccactttttcaattcccaacactccacaacattttttctctcttaattcaacacccattcaatttttacctctccaatggttttttcattcaacacccta 13110664  T
Q  409 ccccaccactttttatttcttattctt 435  Q
     |||||||| |||||||||||||||||    
T  13110665 acccaccacattttatttcttattctt 13110691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 298 - 435
Target Start/End: Original strand, 35809149 - 35809293
Alignment:
Q  298 ttcaacaccattcaaaatccactttttcaatttccaacactctacatcattttctctttc-ttattcaacactcattcaacttttacc------cttggt 390  Q
    ||||| ||| ||||| |||||||||||||||| |||||| || |||||||||||||| || | ||||||||| ||||||| |||||||       | | |    
T  35809149 ttcaatacccttcaacatccactttttcaattcccaacattccacatcattttctctctcataattcaacacccattcaatttttacctctccaatagtt 35809248  T
Q  391 ttttcattcaacactctaccccaccactttttatttcttattctt 435  Q
    |||||||||||||| |||| ||| ||| |||||||||||||||||    
T  35809249 ttttcattcaacaccctactccatcaccttttatttcttattctt 35809293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 273 - 435
Target Start/End: Complemental strand, 23390040 - 23389870
Alignment:
Q  273 agaccatccccaatggttaaacacattcaacaccattcaaaatccactttttcaatttccaacactctacatcattttctctttc-ttattcaacactca 371  Q
    ||||||||||||||||| ||| | ||| || ||| ||||| |  ||||||||||||| ||||||||| |||| ||||||||| || | |||||| |||||    
T  23390040 agaccatccccaatggtaaaaaaaatttaatacctttcaacactcactttttcaattcccaacactccacattattttctctctcataattcaatactca 23389941  T
Q  372 ttcaacttttacc-ct----tgg--tttttcattcaacactctaccccaccactttttatttcttattctt 435  Q
    ||||| | ||||| ||    |||  ||||||||||||||||| |||||||| | ||||||||| |||||||    
T  23389940 ttcaattgttacctctccaatggtttttttcattcaacactcaaccccacctccttttatttcctattctt 23389870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 318 - 435
Target Start/End: Complemental strand, 34464089 - 34463966
Alignment:
Q  318 actttttcaatttccaacactctacatcattttctctttctta-ttcaacactcattcaacttttacc-ct----tggtttttcattcaacactctaccc 411  Q
    ||||||| ||||||||||| |  |||||||||||||| ||||| |||||||| | ||||| ||||||| ||    | |||||||||||||||  ||||||    
T  34464089 acttttttaatttccaacatttcacatcattttctctctcttaattcaacaccctttcaatttttacctctccaatagtttttcattcaacatcctaccc 34463990  T
Q  412 caccactttttatttcttattctt 435  Q
    |||||| |||||||||||||||||    
T  34463989 caccaccttttatttcttattctt 34463966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 318 - 435
Target Start/End: Original strand, 52017350 - 52017476
Alignment:
Q  318 actttttcaatttccaacactctacatcattttctctttctt-attcaacactcattcaacttttacc-ct----tgg-tttttca--ttcaacactcta 408  Q
    |||||||||||| | ||||||| |||||||||||||| |||| ||||||||||||||||| ||||||| ||    ||| |||||||  |||||||| |||    
T  52017350 actttttcaattcctaacactcaacatcattttctctctcttaattcaacactcattcaatttttacctctccaatggttttttcattttcaacacccta 52017449  T
Q  409 ccccaccactttttatttcttattctt 435  Q
    ||||||||  |||||||||||||||||    
T  52017450 ccccaccatcttttatttcttattctt 52017476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 390 - 435
Target Start/End: Original strand, 27863800 - 27863845
Alignment:
Q  390 tttttcattcaacactctaccccaccactttttatttcttattctt 435  Q
    |||||||||||||||||||||||||||| |||||||||||||||||    
T  27863800 tttttcattcaacactctaccccaccaccttttatttcttattctt 27863845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 309 - 435
Target Start/End: Original strand, 33523267 - 33523401
Alignment:
Q  309 tcaaaatccactttttcaatttccaacactctacatcattttctctttctta-ttcaacactcattcaacttttaccct------tggtttttc-attca 400  Q
    |||| |||||||||||||||| |||||| || |||||||||||||| ||||| |||||||  ||||||| ||||   ||      || |||||  |||||    
T  33523267 tcaacatccactttttcaattcccaacattccacatcattttctctctcttaattcaacatccattcaattttttatctctccaatgatttttttattca 33523366  T
Q  401 acactctaccccaccactttttatttcttattctt 435  Q
    ||||||||||||||||| |||||||||||||||||    
T  33523367 acactctaccccaccaccttttatttcttattctt 33523401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 316 - 430
Target Start/End: Original strand, 4981513 - 4981634
Alignment:
Q  316 ccactttttcaatttccaacactctacatcattttctctttctta-ttcaacactcattcaacttttaccctt------ggtttttcattcaacactcta 408  Q
    |||||||||||||| ||||||||| |||||||||||||| || || ||||||||  ||| || |||||||  |      | ||||||||||||||| |||    
T  4981513 ccactttttcaattcccaacactccacatcattttctctctcataattcaacacctatttaatttttacctctccaatagttttttcattcaacacccta 4981612  T
Q  409 ccccaccactttttatttctta 430  Q
    ||||||||| ||||||||||||    
T  4981613 ccccaccaccttttatttctta 4981634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 318 - 435
Target Start/End: Original strand, 19272789 - 19272913
Alignment:
Q  318 actttttcaatttccaacactctacatcattttctctttctta-ttcaacactcattcaacttttaccctt------ggtttttcattcaacactctacc 410  Q
    |||||||||||| ||||||||| |||||||||||||| || || |||||||  ||||||| ||||| |  |      | ||||||||||||||  |||||    
T  19272789 actttttcaattcccaacactccacatcattttctctctcataattcaacatccattcaatttttatctctccaatagttttttcattcaacatcctacc 19272888  T
Q  411 ccaccactttttatttcttattctt 435  Q
    ||||||| |||||||||||||||||    
T  19272889 ccaccaccttttatttcttattctt 19272913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 390 - 435
Target Start/End: Complemental strand, 27142317 - 27142272
Alignment:
Q  390 tttttcattcaacactctaccccaccactttttatttcttattctt 435  Q
    ||||||||||||||| |||||||||||| |||||||||||||||||    
T  27142317 tttttcattcaacaccctaccccaccaccttttatttcttattctt 27142272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 390 - 435
Target Start/End: Original strand, 52772838 - 52772883
Alignment:
Q  390 tttttcattcaacactctaccccaccactttttatttcttattctt 435  Q
    ||||||||||||||| |||||||||||| |||||||||||||||||    
T  52772838 tttttcattcaacaccctaccccaccaccttttatttcttattctt 52772883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 298 - 435
Target Start/End: Complemental strand, 17329998 - 17329854
Alignment:
Q  298 ttcaacaccattcaaaatccactttttcaatttccaacactctacatcattttctctttctta-ttcaacactcattcaacttttaccct------tggt 390  Q
    ||||| ||| ||||| |||||||||||||||| |||||| || |||||||||||||| || || |||||||   |||||| ||||  |||      ||||    
T  17329998 ttcaatacccttcaacatccactttttcaatt-ccaacattccacatcattttctctctcataattcaacatctattcaattttttacctccccaatggt 17329900  T
Q  391 tttt-cattcaacactctaccccaccactttttatttcttattctt 435  Q
    |||| |||||||||| ||| |||||||| |||||||| ||||||||    
T  17329899 tttttcattcaacaccctaacccaccaccttttatttgttattctt 17329854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 284 - 384
Target Start/End: Complemental strand, 31336454 - 31336353
Alignment:
Q  284 aatggttaaacacattcaacaccattcaaaatccactttttcaatttccaacactctacatcattttctctttctt-attcaacactcattcaactttta 382  Q
    |||||||||||| |||||||| |  |||| | | | ||||||||||  |||||||| || ||||||||||| |||| ||||||||| | ||||| |||||    
T  31336454 aatggttaaacatattcaacaaccctcaatacctattttttcaattctcaacactccacgtcattttctctctcttaattcaacaccctttcaattttta 31336355  T
Q  383 cc 384  Q
    ||    
T  31336354 cc 31336353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 86; Significance: 6e-41; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 298 - 435
Target Start/End: Original strand, 124001 - 124142
Alignment:
Q  298 ttcaacaccattcaaaatccactttttcaatttccaacactctacatcattttctctttcttattcaacactcattcaacttttaccct------tggtt 391  Q
    ||||||||||||||| |||||||||||||||||||||||||| |||||||||| ||  ||||||||||||||||||||||||||||| |      |||||    
T  124001 ttcaacaccattcaacatccactttttcaatttccaacactccacatcattttttc--tcttattcaacactcattcaacttttaccatctccaatggtt 124098  T
Q  392 tttcattcaacactctaccccaccactttttatttcttattctt 435  Q
    ||||||||||||||||||||| ||| ||||||||||||||||||    
T  124099 tttcattcaacactctacccctccattttttatttcttattctt 124142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 84; Significance: 9e-40; HSPs: 24)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 84; E-Value: 9e-40
Query Start/End: Original strand, 303 - 435
Target Start/End: Complemental strand, 6380569 - 6380432
Alignment:
Q  303 caccattcaaaatccactttttcaatttccaacactctacatcattttctctttcttattcaacactcattcaacttttaccct------tggtttttca 396  Q
    |||||||||| | |||||||||||||| ||||||||| |||||||||||||| ||||||||||||| |||||||||||||||||      ||||||||||    
T  6380569 caccattcaaca-ccactttttcaattcccaacactccacatcattttctctctcttattcaacacacattcaacttttaccctctccaatggtttttca 6380471  T
Q  397 ttcaacactctaccccaccactttttatttcttattctt 435  Q
    |||||||||||||||||||||||||||||| ||||||||    
T  6380470 ttcaacactctaccccaccactttttattttttattctt 6380432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 304 - 425
Target Start/End: Complemental strand, 29428598 - 29428471
Alignment:
Q  304 accattcaaaatccactttttcaatttccaacactctacatcattttctctttcttattcaacactcattcaacttttaccct------tggtttttcat 397  Q
    ||||||||| |||||||||||||||| ||||||||| |||||||||||||| |||||||||||||||||||||||||||| ||      |||||||||||    
T  29428598 accattcaacatccactttttcaattcccaacactccacatcattttctctctcttattcaacactcattcaacttttacactctcaaatggtttttcat 29428499  T
Q  398 tcaacactctaccccaccactttttatt 425  Q
    ||||||||||||||||||| ||||||||    
T  29428498 tcaacactctaccccaccattttttatt 29428471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 283 - 435
Target Start/End: Original strand, 8669860 - 8670018
Alignment:
Q  283 caatggttaaacacattcaacaccattcaaaatccactttttcaatttccaacactctacatcattttctctttctt-attcaacactcattcaactttt 381  Q
    ||||||| ||| |||||||||| | ||||| |||||||||||||||||||||||||  |||| ||||||||| |||| ||||||||| ||||||| ||||    
T  8669860 caatggtaaaatacattcaacaaccttcaacatccactttttcaatttccaacacttcacattattttctctctcttaattcaacacccattcaattttt 8669959  T
Q  382 acc-ct----tggtttttcattcaacactctaccccaccactttttatttcttattctt 435  Q
    ||| ||    |||||||||||||||||| |||||||||||| |||||||||||||||||    
T  8669960 acctctccaatggtttttcattcaacaccctaccccaccaccttttatttcttattctt 8670018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 271 - 432
Target Start/End: Original strand, 631477 - 631644
Alignment:
Q  271 taagaccatccccaatggttaaacacattcaacaccattcaaaatccactttttcaatttccaacactctacatcattttctctttctt-attcaacact 369  Q
    ||||||||||  ||||||||||||||| | || ||||||||| | |||||||||||||| ||||||||| |||||||||||||| |||| ||||||||||    
T  631477 taagaccatctacaatggttaaacacaat-aataccattcaacacccactttttcaattcccaacactccacatcattttctctctcttcattcaacact 631575  T
Q  370 cattcaacttttacc-ct----tgg-tttttcattcaacactctaccccaccactttttatttcttatt 432  Q
    ||||||| ||||||| ||    ||| ||||||||||||||| |||||||||||| ||||||||||||||    
T  631576 cattcaatttttacctctccaatggttttttcattcaacaccctaccccaccaccttttatttcttatt 631644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 283 - 435
Target Start/End: Original strand, 34838551 - 34838709
Alignment:
Q  283 caatggttaaacacattcaacaccattcaaaatccactttttcaatttccaacactctacatcattttctctttctt-attcaacactcattcaactttt 381  Q
    ||||||| ||| |||||||| | | ||||| |  ||||||||||||| ||||||||| |||||||||||||| |||| ||||||||| ||||||| ||||    
T  34838551 caatggtaaaatacattcaataaccttcaacactcactttttcaattcccaacactccacatcattttctctctcttaattcaacacccattcaattttt 34838650  T
Q  382 acc-ct----tggtttttcattcaacactctaccccaccactttttatttcttattctt 435  Q
    ||| ||    |||||||| ||||||||| |||||||||||| |||||||||||||||||    
T  34838651 acctctccaatggttttttattcaacaccctaccccaccaccttttatttcttattctt 34838709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 316 - 435
Target Start/End: Complemental strand, 6725693 - 6725567
Alignment:
Q  316 ccactttttcaatttccaacactctacatcattttctctttcttattcaacactcattcaacttttac--cctt-----ggtttttcattcaacactcta 408  Q
    ||||||||||  || ||||||||| |||||||||||||| ||||||||||||||||||||||||||||   |||     | |||||||||||||||||||    
T  6725693 ccactttttctcttcccaacactccacatcattttctctctcttattcaacactcattcaacttttactatcttcaatggttttttcattcaacactcta 6725594  T
Q  409 ccccaccactttttatttcttattctt 435  Q
    |||||||| |||||||||| |||||||    
T  6725593 ccccaccattttttatttcatattctt 6725567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 283 - 435
Target Start/End: Original strand, 34328252 - 34328410
Alignment:
Q  283 caatggttaaacacattcaacaccattcaaaatccactttttcaatttccaacactctacatcattttctctttctt-attcaacactcattcaactttt 381  Q
    |||||||| |||||| | || ||||||||| | |||||||||||||| ||||||||| |||||||||| ||| |||| ||||||||||||||||| ||||    
T  34328252 caatggttcaacacaat-aataccattcaacacccactttttcaattcccaacactccacatcattttatctctcttaattcaacactcattcaattttt 34328350  T
Q  382 ac----cc--ttggtttttcattcaacactctaccccaccactttttatttcttattctt 435  Q
    ||    ||  | | ||||||||||||||| |||||||||||| |||||||||||||||||    
T  34328351 acatctccaatggttttttcattcaacaccctaccccaccaccttttatttcttattctt 34328410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 309 - 435
Target Start/End: Original strand, 10883868 - 10884001
Alignment:
Q  309 tcaaaatccactttttcaatttccaacactctacatcattttctctttctt-attcaacactcattcaacttttacc-ct----tg-gtttttcattcaa 401  Q
    |||| |||||||||||||||||||||||||| |||||||||||||| |||| ||||||||| ||||||| ||||||| ||    ||  ||||||||||||    
T  10883868 tcaacatccactttttcaatttccaacactccacatcattttctctctcttaattcaacacccattcaatttttacctctccaatgattttttcattcaa 10883967  T
Q  402 cactctaccccaccactttttatttcttattctt 435  Q
    ||  |||||||||||| |||||||||||||||||    
T  10883968 catcctaccccaccaccttttatttcttattctt 10884001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 283 - 435
Target Start/End: Original strand, 197775 - 197933
Alignment:
Q  283 caatggttaaacacattcaacaccattcaaaatccactttttcaatttccaacactctacatcattttctctttctt-attcaacactcattcaactttt 381  Q
    |||||||| |||||| | || ||||||||| |||||||||||||||| ||||||||| || ||||||||||| |||| ||||||||| ||||||| ||||    
T  197775 caatggttcaacacaat-aataccattcaacatccactttttcaattcccaacactccacgtcattttctctctcttaattcaacacccattcaattttt 197873  T
Q  382 ac----cc--ttggtttttcattcaacactctaccccaccactttttatttcttattctt 435  Q
    ||    ||  |   ||||||||||||||| |||||||||||| |||||||||||||||||    
T  197874 acatctccaatgattttttcattcaacaccctaccccaccaccttttatttcttattctt 197933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 296 - 438
Target Start/End: Original strand, 22627819 - 22627968
Alignment:
Q  296 cattcaacaccattcaaaatccactttttcaatttccaacactctacatcattttctctttcttattcaacactcattc-aactttta------cccttg 388  Q
    ||||||||| || |||| | |||| ||||||||||||||||||| |||||||||||||| | ||||||||||  ||||| ||||||||      ||  ||    
T  22627819 cattcaacaacactcaacacccacgttttcaatttccaacactccacatcattttctctcttttattcaacatccattcaaacttttatcttctccaatg 22627918  T
Q  389 gtttttcattcaacactctaccccaccactttttatttcttattcttgtt 438  Q
     ||||||||||| |||||||||||||||  ||||||||||||||||||||    
T  22627919 atttttcattcagcactctaccccaccatcttttatttcttattcttgtt 22627968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 316 - 435
Target Start/End: Original strand, 24348436 - 24348562
Alignment:
Q  316 ccactttttcaatttccaacactctacatcattttctctttctta-ttcaacactcattcaacttttacc-ctt-----ggtttttcattcaacactcta 408  Q
    |||||||||||||| ||||||||| |||||||||||||| | ||| |||||||  ||||||| ||||||| |||     | |||||||||||||||||||    
T  24348436 ccactttttcaattcccaacactccacatcattttctctcttttaattcaacatccattcaatttttacctcttcaatggttttttcattcaacactcta 24348535  T
Q  409 ccccaccactttttatttcttattctt 435  Q
    ||||||||| |||||||||||||||||    
T  24348536 ccccaccaccttttatttcttattctt 24348562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 283 - 435
Target Start/End: Original strand, 30446214 - 30446373
Alignment:
Q  283 caatggttaaacacattcaacaccattcaaaatccactttttcaatttccaacactctacatcattttctctttctta-ttcaacactcattcaactttt 381  Q
    ||||||| ||||| |||||||| |  |||| | ||| |||||||||| | ||||||| |||||||||||||| ||||| |||||||| ||||||| ||||    
T  30446214 caatggtaaaacaaattcaacaaccctcaacacccattttttcaattcctaacactccacatcattttctctctcttaattcaacacccattcaattttt 30446313  T
Q  382 acc-ct----tggtttt-tcattcaacactctaccccaccactttttatttcttattctt 435  Q
    ||| ||    || |||| |||||||||||||||||||||||| |||||||||||||||||    
T  30446314 acctctccaatgattttttcattcaacactctaccccaccaccttttatttcttattctt 30446373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 314 - 435
Target Start/End: Original strand, 12512914 - 12513042
Alignment:
Q  314 atccactttttcaatttccaacactctacatcattttctctttctta-ttcaacactcattcaacttttacc-ct----tggtttt-tcattcaacactc 406  Q
    ||||||||||||||||| ||||| || |||||||||| ||| ||||| |||||||| ||||||| ||||||| ||    || |||| |||||||||||||    
T  12512914 atccactttttcaattttcaacattccacatcattttttctctcttaattcaacacccattcaatttttacctctccaatgattttttcattcaacactc 12513013  T
Q  407 taccccaccactttttatttcttattctt 435  Q
    ||||||||||| |||||||||||||||||    
T  12513014 taccccaccaccttttatttcttattctt 12513042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 283 - 435
Target Start/End: Complemental strand, 17961364 - 17961206
Alignment:
Q  283 caatggttaaacacattcaacaccattcaaaatccactttttcaatttccaacactctacatcattttctctttctta-ttcaacactcattcaactttt 381  Q
    |||||||| |||||| | || ||||||||| | |||||||||||||| ||||||||| |||| ||||||||| ||||| |||||||  ||| ||| ||||    
T  17961364 caatggttcaacacaat-aataccattcaacacccactttttcaattcccaacactccacataattttctctctcttaattcaacaaacatacaattttt 17961266  T
Q  382 acc-ct----tggttttt-cattcaacactctaccccaccactttttatttcttattctt 435  Q
    ||| ||    |||||||| |||||||||| |||||||||||| |||||||||||||||||    
T  17961265 acctctccaatggttttttcattcaacaccctaccccaccaccttttatttcttattctt 17961206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 316 - 435
Target Start/End: Original strand, 12501835 - 12501961
Alignment:
Q  316 ccactttttcaatttccaacactctacatcattttctctttctta-ttcaacactcattcaacttttacc---ct--tggtttt-tcattcaacactcta 408  Q
    ||||||||||||||  ||||| || |||||||||||||| ||||| |||||||| ||||||| |||||||   ||  || |||| |||||||||||||||    
T  12501835 ccactttttcaattctcaacaatccacatcattttctctctcttaattcaacacccattcaatttttacctctctaatgattttttcattcaacactcta 12501934  T
Q  409 ccccaccactttttatttcttattctt 435  Q
    ||||||||| |||||||||||||||||    
T  12501935 ccccaccaccttttatttcttattctt 12501961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 332 - 433
Target Start/End: Original strand, 8218964 - 8219072
Alignment:
Q  332 caacactctacatcattttctctttctta-ttcaacactcattcaacttttacc-ct----tggtttt-tcattcaacactctaccccaccactttttat 424  Q
    |||||||| |||| ||||||||| ||||| |||||||| ||||||||||||||| ||    ||||||| |||||||||||||||||||||||| ||||||    
T  8218964 caacactccacattattttctctctcttaattcaacacccattcaacttttacctctccaatggttttttcattcaacactctaccccaccaccttttat 8219063  T
Q  425 ttcttattc 433  Q
    |||||||||    
T  8219064 ttcttattc 8219072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 320 - 435
Target Start/End: Original strand, 32359753 - 32359875
Alignment:
Q  320 tttttcaatttccaacactctacatcattttctctttcttattcaacactcattcaacttttaccct------tggtttttcattcaacactctacccca 413  Q
    |||||||||| |||||| || |||||||||||||| ||||||||||||||||||| | |||||||||      | ||||||||||||||  |||||||||    
T  32359753 tttttcaattcccaacattccacatcattttctctctcttattcaacactcattccatttttaccctctccaatagtttttcattcaacgttctacccca 32359852  T
Q  414 ccactttttat-ttcttattctt 435  Q
    ||| ||||| | |||||||||||    
T  32359853 ccattttttttcttcttattctt 32359875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 291 - 384
Target Start/End: Original strand, 8660537 - 8660631
Alignment:
Q  291 aaacacattcaacaccattcaaaatccactttttcaatttccaacactctacatcattttctctttctt-attcaacactcattcaacttttacc 384  Q
    |||| ||||||||| | ||||| | |||||||||||||| ||||||||| |||||||||||||| |||| ||||||||| ||||||| |||||||    
T  8660537 aaacccattcaacaaccttcaacacccactttttcaattcccaacactccacatcattttctctctcttaattcaacacacattcaatttttacc 8660631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 318 - 435
Target Start/End: Complemental strand, 26654402 - 26654278
Alignment:
Q  318 actttttcaatttccaacactctacatcattttctctttctta-ttcaacactcattcaacttttaccctt------ggtttttcattcaacactctacc 410  Q
    ||||||||||||  ||||||||||  ||||||||||| || || |||||||| ||||||| |||||||  |      | ||||||||||||||| |||||    
T  26654402 actttttcaattctcaacactctatgtcattttctctctcataattcaacacccattcaatttttacctctccaatagttttttcattcaacaccctacc 26654303  T
Q  411 ccaccactttttatttcttattctt 435  Q
    ||||||| |||||||||||||||||    
T  26654302 ccaccaccttttatttcttattctt 26654278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 318 - 435
Target Start/End: Complemental strand, 26760372 - 26760248
Alignment:
Q  318 actttttcaatttccaacactctacatcattttctctttctta-ttcaacactcattcaacttttaccctt------ggtttttcattcaacactctacc 410  Q
    ||||||||||||  ||||||||||  ||||||||||| || || |||||||| ||||||| |||||||  |      | ||||||||||||||| |||||    
T  26760372 actttttcaattctcaacactctatgtcattttctctctcataattcaacacccattcaatttttacctctccaatagttttttcattcaacaccctacc 26760273  T
Q  411 ccaccactttttatttcttattctt 435  Q
    ||||||| |||||||||||||||||    
T  26760272 ccaccaccttttatttcttattctt 26760248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 309 - 376
Target Start/End: Original strand, 12480313 - 12480381
Alignment:
Q  309 tcaaaatccactttttcaatttccaacactctacatcattttctctttctt-attcaacactcattcaa 376  Q
    |||| |||||||||||||||||| |||||||||||||||||||||  |||| ||||||||| |||||||    
T  12480313 tcaacatccactttttcaatttcaaacactctacatcattttctcactcttaattcaacacccattcaa 12480381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 390 - 432
Target Start/End: Original strand, 34242390 - 34242432
Alignment:
Q  390 tttttcattcaacactctaccccaccactttttatttcttatt 432  Q
    |||||||||||||||||||||||||||| ||||||||||||||    
T  34242390 tttttcattcaacactctaccccaccaccttttatttcttatt 34242432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 390 - 435
Target Start/End: Original strand, 2503309 - 2503354
Alignment:
Q  390 tttttcattcaacactctaccccaccactttttatttcttattctt 435  Q
    ||||||||||||||| |||||||||||| |||||||||||||||||    
T  2503309 tttttcattcaacaccctaccccaccaccttttatttcttattctt 2503354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 308 - 435
Target Start/End: Complemental strand, 24933359 - 24933224
Alignment:
Q  308 ttcaaaatccactttttcaatttccaacactctacatcattttctctttctta-ttcaacactcattcaac--ttttacc-ct----tggttttt-catt 398  Q
    ||||| ||||| |||||||||||| ||||||| |||| ||||||||| || || ||||||||||||||||   ||||||| ||    |||||||| ||||    
T  24933359 ttcaacatccattttttcaatttc-aacactccacattattttctctctcataattcaacactcattcaatatttttacctctccaatggttttttcatt 24933261  T
Q  399 caacactctaccccaccactttttatttcttattctt 435  Q
    |||||  |||||||||||| |||||||||||||||||    
T  24933260 caacatcctaccccaccaccttttatttcttattctt 24933224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0362 (Bit Score: 56; Significance: 5e-23; HSPs: 1)
Name: scaffold0362
Description:

Target: scaffold0362; HSP #1
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 316 - 435
Target Start/End: Complemental strand, 5391 - 5265
Alignment:
Q  316 ccactttttcaatttccaacactctacatcattttctctttctt-attcaacactcattcaacttttacc------cttggtttttcattcaacactcta 408  Q
    |||||||||||||| ||||||||| ||||||||||||||||||| ||||||||  ||||||| |||||||      || | ||||||||||||||| |||    
T  5391 ccactttttcaattcccaacactccacatcattttctctttcttaattcaacatccattcaatttttacctctccactggttttttcattcaacacccta 5292  T
Q  409 ccccaccactttttatttcttattctt 435  Q
    ||| ||||| |||||||||||||||||    
T  5291 ccctaccaccttttatttcttattctt 5265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0054 (Bit Score: 56; Significance: 5e-23; HSPs: 2)
Name: scaffold0054
Description:

Target: scaffold0054; HSP #1
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 295 - 435
Target Start/End: Complemental strand, 57832 - 57685
Alignment:
Q  295 acattcaacaccattcaaaatccactttttcaatttccaacactctacatcattttctctttctt-attcaacactcattcaacttttacc-ctt----- 387  Q
    |||||||||| |  |||| | |||||||||||||| ||||||||| |||||||||||||| |||| ||||||||| ||||||| ||||||| |||         
T  57832 acattcaacaaccctcaacacccactttttcaattcccaacactccacatcattttctctctcttaattcaacacccattcaatttttacctcttcaatg 57733  T
Q  388 ggtttttcattcaacactctaccccaccactttttatttcttattctt 435  Q
    | ||||||||||||||| ||||||||| || |||||||||||||||||    
T  57732 gttttttcattcaacaccctaccccacaaccttttatttcttattctt 57685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0054; HSP #2
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 314 - 435
Target Start/End: Original strand, 55069 - 55189
Alignment:
Q  314 atccactttttcaatttccaacactctacatcattttctctttcttattcaacactcattcaacttttacccttggtttttcattcaacactctacccca 413  Q
    ||||| ||||||||||  ||||||||  ||||||||| | ||| | ||||||||| |||| || ||||||| |   ||||||||||||||| ||||| ||    
T  55069 atccattttttcaattctcaacactccgcatcattttttttttgtaattcaacacccatttaatttttacc-tccttttttcattcaacaccctacctca 55167  T
Q  414 ccactttttatttcttattctt 435  Q
    |||| |||||||||||||||||    
T  55168 ccaccttttatttcttattctt 55189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 49; Significance: 7e-19; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 318 - 435
Target Start/End: Complemental strand, 66138 - 66014
Alignment:
Q  318 actttttcaatttccaacactctacatcattttctctttctta-ttcaacactcattcaacttttacc-cttgg-----tttttcattcaacactctacc 410  Q
    ||||||||||||  |||||||| |||||||||||||| || || |||||||||||||||| ||||||| |||       ||||||||||||||| |||||    
T  66138 actttttcaattctcaacactccacatcattttctctctcataattcaacactcattcaatttttacctcttcaataattttttcattcaacaccctacc 66039  T
Q  411 ccaccactttttatttcttattctt 435  Q
    ||||||| |||||||||||||||||    
T  66038 ccaccaccttttatttcttattctt 66014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 395 - 427
Target Start/End: Complemental strand, 170602 - 170570
Alignment:
Q  395 cattcaacactctaccccaccactttttatttc 427  Q
    |||||||||||||||||||||||||||||||||    
T  170602 cattcaacactctaccccaccactttttatttc 170570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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