View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF3291_high_8 (Length: 371)
Name: NF3291_high_8
Description: NF3291
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3291_high_8 |
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Alignment Details
Target: chr7 (Bit Score: 249; Significance: 1e-138; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 249; E-Value: 1e-138
Query Start/End: Original strand, 31 - 356
Target Start/End: Complemental strand, 44801805 - 44801486
Alignment:
| Q |
31 |
tagtatatgttgaaacaaaaattgtcgctagaataactataagcttaacaaaatcaaaatcattattaaccgcataccaagcttcatcacaactcatgta |
130 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |
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| T |
44801805 |
tagtatatgttgaaacaaaaattgtcgctagaataactataagcttaacaaaatcaaaatcatta---accgcataccaagcttcatcacaactcatgta |
44801709 |
T |
|
| Q |
131 |
ggttttaggaagaaagaaaatctagcgtcaaggaaatgtctacggctataagttgattagaatatgaactagtgaaccggacaaactaaaccaatctaat |
230 |
Q |
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||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |
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| T |
44801708 |
ggttttaggaagaaagaaaatctagtgtcaaggaaatgtctacggctataagttgattag---atgaactagtgaaccggacaaactaaaccaatctaat |
44801612 |
T |
|
| Q |
231 |
atgtaaaatacaacgagcactatgcaaatagnnnnnnnaattaaattgtagtaaaatttatgtcttacatatgtgatggtnnnnnnnngtccactttcac |
330 |
Q |
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||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||| |
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| T |
44801611 |
atgtaaaatacaacgagcactatgcaaatagtttttttaattaaattgtagtaaaatttatgtcttacatatgtgatggtaaaaaaaagtccactttcac |
44801512 |
T |
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| Q |
331 |
acggtccctttcataagaaaccatct |
356 |
Q |
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|||||||||||||||||||||||||| |
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| T |
44801511 |
acggtccctttcataagaaaccatct |
44801486 |
T |
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