View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF3293_low_8 (Length: 248)

Name: NF3293_low_8
Description: NF3293
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF3293_low_8
NF3293_low_8
[»] chr1 (32 HSPs)
chr1 (1-238)||(27094140-27094383)
chr1 (131-223)||(16182229-16182321)
chr1 (143-223)||(42735912-42735992)
chr1 (152-223)||(52431855-52431925)
chr1 (142-216)||(18512533-18512607)
chr1 (142-223)||(36313938-36314018)
chr1 (142-223)||(37662515-37662596)
chr1 (142-186)||(12613245-12613289)
chr1 (142-221)||(8741506-8741585)
chr1 (142-223)||(4865780-4865861)
chr1 (131-223)||(1604171-1604263)
chr1 (151-223)||(7180581-7180653)
chr1 (151-223)||(23233982-23234054)
chr1 (151-223)||(35605590-35605662)
chr1 (157-221)||(45518358-45518422)
chr1 (142-221)||(27579432-27579511)
chr1 (142-180)||(13763835-13763873)
chr1 (142-216)||(18911889-18911963)
chr1 (142-180)||(45180480-45180518)
chr1 (142-220)||(51137818-51137895)
chr1 (142-223)||(7191063-7191144)
chr1 (142-223)||(11344469-11344550)
chr1 (142-223)||(11502489-11502570)
chr1 (142-223)||(21265687-21265768)
chr1 (142-223)||(33033157-33033238)
chr1 (131-223)||(1195229-1195321)
chr1 (142-186)||(4553504-4553548)
chr1 (142-186)||(5430997-5431041)
chr1 (151-223)||(11333695-11333766)
chr1 (151-223)||(11491716-11491787)
chr1 (151-223)||(36860629-36860701)
chr1 (149-221)||(41998381-41998453)
[»] chr2 (28 HSPs)
chr2 (131-216)||(18254627-18254712)
chr2 (142-199)||(15939344-15939401)
chr2 (142-223)||(39635331-39635412)
chr2 (142-216)||(5947904-5947978)
chr2 (142-216)||(32854570-32854644)
chr2 (142-223)||(8250259-8250340)
chr2 (146-187)||(38533615-38533656)
chr2 (131-223)||(28194663-28194755)
chr2 (149-213)||(36748927-36748991)
chr2 (151-199)||(44898449-44898497)
chr2 (150-216)||(10463160-10463229)
chr2 (155-202)||(13424056-13424103)
chr2 (142-201)||(32857905-32857964)
chr2 (150-216)||(7717571-7717637)
chr2 (142-216)||(23984181-23984255)
chr2 (153-187)||(38534138-38534172)
chr2 (142-223)||(3596281-3596361)
chr2 (142-223)||(5612985-5613066)
chr2 (142-199)||(6973407-6973463)
chr2 (149-186)||(20497160-20497197)
chr2 (142-223)||(33228891-33228972)
chr2 (159-220)||(42998827-42998888)
chr2 (142-202)||(7907501-7907561)
chr2 (142-214)||(14518324-14518396)
chr2 (131-199)||(15795916-15795984)
chr2 (151-199)||(33549021-33549069)
chr2 (131-223)||(39408637-39408729)
chr2 (131-199)||(42756221-42756288)
[»] chr5 (37 HSPs)
chr5 (142-199)||(885116-885173)
chr5 (142-223)||(8241081-8241162)
chr5 (142-186)||(34434258-34434302)
chr5 (142-216)||(3740992-3741066)
chr5 (142-216)||(29499213-29499287)
chr5 (137-186)||(4418295-4418344)
chr5 (142-202)||(33372960-33373019)
chr5 (131-186)||(7545345-7545400)
chr5 (132-186)||(14970347-14970401)
chr5 (142-199)||(5195103-5195160)
chr5 (142-223)||(6734697-6734777)
chr5 (150-223)||(17693153-17693224)
chr5 (131-220)||(36564369-36564458)
chr5 (142-186)||(6167280-6167324)
chr5 (142-186)||(7443407-7443451)
chr5 (151-223)||(16745112-16745184)
chr5 (151-223)||(34729977-34730049)
chr5 (131-223)||(42320348-42320440)
chr5 (142-221)||(15241110-15241187)
chr5 (142-216)||(17891816-17891891)
chr5 (142-181)||(33383646-33383685)
chr5 (142-180)||(3821379-3821417)
chr5 (151-201)||(8752515-8752565)
chr5 (142-216)||(22228920-22228994)
chr5 (142-216)||(23937891-23937965)
chr5 (142-199)||(25460738-25460796)
chr5 (155-201)||(39804417-39804463)
chr5 (142-216)||(41930143-41930217)
chr5 (150-223)||(6234761-6234833)
chr5 (142-183)||(16819263-16819304)
chr5 (142-223)||(39799988-39800069)
chr5 (131-223)||(546833-546925)
chr5 (151-223)||(6558832-6558904)
chr5 (151-223)||(18928751-18928823)
chr5 (151-223)||(20707754-20707826)
chr5 (143-223)||(24456220-24456298)
chr5 (151-199)||(30872342-30872390)
[»] chr3 (42 HSPs)
chr3 (142-223)||(25883946-25884027)
chr3 (142-216)||(15085642-15085716)
chr3 (142-216)||(27329890-27329964)
chr3 (142-216)||(41253707-41253781)
chr3 (142-216)||(44625183-44625257)
chr3 (142-216)||(51879133-51879207)
chr3 (142-187)||(4808003-4808048)
chr3 (142-223)||(23653175-23653255)
chr3 (143-223)||(14795142-14795222)
chr3 (142-198)||(36472389-36472445)
chr3 (142-186)||(41710651-41710695)
chr3 (145-223)||(26880208-26880285)
chr3 (142-216)||(49028901-49028975)
chr3 (149-186)||(8488495-8488532)
chr3 (149-198)||(9114067-9114116)
chr3 (142-203)||(32429798-32429859)
chr3 (142-223)||(35849512-35849592)
chr3 (131-180)||(39709112-39709161)
chr3 (142-199)||(48546228-48546285)
chr3 (142-223)||(49443382-49443462)
chr3 (143-223)||(23090284-23090364)
chr3 (131-223)||(34102558-34102650)
chr3 (142-221)||(46336460-46336539)
chr3 (149-203)||(10828521-10828575)
chr3 (142-180)||(46767417-46767455)
chr3 (149-223)||(46844937-46845010)
chr3 (142-199)||(4860216-4860273)
chr3 (142-199)||(4880224-4880281)
chr3 (145-194)||(16991896-16991945)
chr3 (131-216)||(19879239-19879324)
chr3 (142-216)||(34102104-34102180)
chr3 (142-223)||(39719966-39720047)
chr3 (142-223)||(41936365-41936446)
chr3 (142-223)||(47098763-47098844)
chr3 (142-223)||(53432695-53432776)
chr3 (142-202)||(8171674-8171734)
chr3 (151-223)||(26942784-26942856)
chr3 (135-223)||(31327669-31327757)
chr3 (151-223)||(31586978-31587050)
chr3 (142-182)||(36478146-36478186)
chr3 (142-186)||(40723618-40723662)
chr3 (144-200)||(51143497-51143552)
[»] chr8 (30 HSPs)
chr8 (149-223)||(13105122-13105196)
chr8 (142-223)||(5328525-5328606)
chr8 (131-216)||(33810678-33810763)
chr8 (142-186)||(26217859-26217903)
chr8 (142-216)||(34873124-34873198)
chr8 (142-216)||(36035137-36035211)
chr8 (142-216)||(37708729-37708803)
chr8 (142-223)||(13059135-13059216)
chr8 (142-223)||(14583228-14583309)
chr8 (142-223)||(17072521-17072602)
chr8 (142-223)||(17575669-17575750)
chr8 (142-203)||(21303429-21303490)
chr8 (142-199)||(31024349-31024406)
chr8 (142-203)||(41086665-41086726)
chr8 (142-199)||(44053398-44053455)
chr8 (143-223)||(30300360-30300440)
chr8 (149-216)||(8183358-8183425)
chr8 (142-216)||(9812999-9813073)
chr8 (152-198)||(36274430-36274475)
chr8 (146-216)||(38730517-38730587)
chr8 (142-223)||(94469-94550)
chr8 (142-223)||(2792810-2792891)
chr8 (142-203)||(10761870-10761931)
chr8 (141-182)||(14181299-14181340)
chr8 (142-199)||(21548455-21548512)
chr8 (142-223)||(34894400-34894481)
chr8 (142-223)||(37290953-37291034)
chr8 (142-186)||(11406637-11406681)
chr8 (155-223)||(12510406-12510474)
chr8 (142-186)||(40904599-40904643)
[»] chr7 (28 HSPs)
chr7 (142-221)||(11692421-11692502)
chr7 (140-223)||(10690878-10690961)
chr7 (142-216)||(46758280-46758354)
chr7 (142-223)||(1563697-1563778)
chr7 (142-223)||(3532609-3532690)
chr7 (141-221)||(42435177-42435257)
chr7 (151-199)||(43404941-43404989)
chr7 (149-220)||(10363385-10363455)
chr7 (149-216)||(27162260-27162327)
chr7 (142-223)||(28799978-28800060)
chr7 (142-223)||(37710116-37710197)
chr7 (142-199)||(18503438-18503495)
chr7 (142-199)||(20421717-20421774)
chr7 (131-223)||(29461762-29461854)
chr7 (131-216)||(32047127-32047212)
chr7 (142-223)||(47440768-47440849)
chr7 (152-199)||(42798285-42798332)
chr7 (149-216)||(46645747-46645814)
chr7 (149-199)||(10901700-10901750)
chr7 (142-216)||(13702063-13702137)
chr7 (144-190)||(35005465-35005511)
chr7 (145-223)||(36114303-36114380)
chr7 (151-223)||(12428221-12428294)
chr7 (151-184)||(21402795-21402828)
chr7 (142-223)||(30388465-30388546)
chr7 (142-171)||(38697268-38697297)
chr7 (139-172)||(40436392-40436425)
chr7 (142-178)||(4232561-4232597)
[»] chr4 (36 HSPs)
chr4 (149-223)||(50376615-50376688)
chr4 (142-216)||(30305837-30305911)
chr4 (142-216)||(36099141-36099215)
chr4 (142-223)||(624511-624592)
chr4 (142-223)||(8965125-8965206)
chr4 (142-223)||(10402472-10402553)
chr4 (151-223)||(11375856-11375928)
chr4 (152-229)||(5440517-5440594)
chr4 (142-223)||(29406388-29406468)
chr4 (142-223)||(37868525-37868606)
chr4 (142-223)||(47890726-47890807)
chr4 (151-199)||(7043939-7043987)
chr4 (142-185)||(4513398-4513441)
chr4 (142-181)||(16589372-16589411)
chr4 (142-221)||(23778783-23778862)
chr4 (158-189)||(39489851-39489882)
chr4 (132-182)||(2860680-2860730)
chr4 (142-216)||(23176680-23176753)
chr4 (142-216)||(28715728-28715802)
chr4 (142-199)||(2870939-2870995)
chr4 (142-199)||(3784966-3785022)
chr4 (142-223)||(30057253-30057334)
chr4 (150-223)||(39401032-39401105)
chr4 (142-223)||(42134415-42134496)
chr4 (142-223)||(44568178-44568258)
chr4 (142-223)||(45303942-45304022)
chr4 (142-223)||(55021585-55021666)
chr4 (142-190)||(3039167-3039215)
chr4 (142-186)||(3161090-3161134)
chr4 (151-223)||(32339355-32339427)
chr4 (142-186)||(37442031-37442075)
chr4 (142-214)||(38848079-38848150)
chr4 (155-223)||(45665002-45665070)
chr4 (142-182)||(47586290-47586330)
chr4 (151-223)||(49056806-49056878)
chr4 (151-199)||(54215816-54215864)
[»] chr6 (19 HSPs)
chr6 (142-216)||(18904303-18904377)
chr6 (142-216)||(32621540-32621614)
chr6 (142-223)||(3709890-3709971)
chr6 (142-223)||(6196307-6196388)
chr6 (131-199)||(1368134-1368202)
chr6 (131-177)||(2044587-2044633)
chr6 (144-190)||(31980919-31980965)
chr6 (142-199)||(32141994-32142051)
chr6 (155-223)||(20846077-20846145)
chr6 (142-182)||(29646709-29646749)
chr6 (142-186)||(32616452-32616496)
chr6 (140-199)||(361218-361277)
chr6 (142-216)||(8297665-8297739)
chr6 (150-220)||(31886430-31886500)
chr6 (142-223)||(7545360-7545441)
chr6 (133-186)||(24878163-24878216)
chr6 (131-199)||(2711485-2711553)
chr6 (142-186)||(28021300-28021344)
chr6 (151-223)||(32049932-32050004)
[»] scaffold0141 (1 HSPs)
scaffold0141 (145-186)||(39870-39911)
[»] scaffold0088 (1 HSPs)
scaffold0088 (142-223)||(10784-10865)
[»] scaffold0049 (1 HSPs)
scaffold0049 (145-186)||(74901-74942)


Alignment Details
Target: chr1 (Bit Score: 172; Significance: 2e-92; HSPs: 32)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 172; E-Value: 2e-92
Query Start/End: Original strand, 1 - 238
Target Start/End: Original strand, 27094140 - 27094383
Alignment:
Q  1 cgaaaccttgactgtccaggtcaagtaccatctctaaaagaaaagaagcaaggtaccatttaactaactcattgttaatagagtgcaaaattcttatagg 100  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27094140 cgaaaccttgactgtccaagtcaagtaccatctctaaaagaaaagaagcaaggtaccatttaactaactcattgttaatagagtgcaaaattcttatagg 27094239  T
Q  101 ggagggctacatctatgta------nnnnnnnnnnngtcaaataacatagtggttggagctcacacattttaaatgtagagaagtgaggtgtttggagtt 194  Q
    |||||||||||||||||||                  ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  27094240 ggagggctacatctatgtatttttttttttttttttttcaaataacatagtggttgaagctcacacattttaaatgtagagaagtgaggtgtttggagtt 27094339  T
Q  195 cgaactccgtcccgtgcatatattatgcacgtcccctacctatg 238  Q
    ||| ||||||||||||||||||||||||||||||||||||||||    
T  27094340 cgagctccgtcccgtgcatatattatgcacgtcccctacctatg 27094383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 131 - 223
Target Start/End: Complemental strand, 16182321 - 16182229
Alignment:
Q  131 gtcaaataacatagtggttggagctcacacattttaaatgtagagaagtgaggtgtttggagttcgaactccgtcccgtgcatatattatgca 223  Q
    ||||||||||||||||  | ||| ||||||||||||||||| |||||||| |||||| ||  ||||||||||  ||| |||||||| ||||||    
T  16182321 gtcaaataacatagtgacttgagttcacacattttaaatgtggagaagtggggtgttcgggattcgaactccagcccatgcatataatatgca 16182229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 143 - 223
Target Start/End: Complemental strand, 42735992 - 42735912
Alignment:
Q  143 agtggttggagctcacacattttaaatgtagagaagtgaggtgtttggagttcgaactccgtcccgtgcatatattatgca 223  Q
    |||| ||||||||||||||||||||||||||||||||| |||||  ||| ||| ||| | | ||| |||||||||||||||    
T  42735992 agtgattggagctcacacattttaaatgtagagaagtggggtgtccggaattcaaacccagacccctgcatatattatgca 42735912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 152 - 223
Target Start/End: Complemental strand, 52431925 - 52431855
Alignment:
Q  152 agctcacacattttaaatgtagagaagtgaggtgtttggagttcgaactccgtcccgtgcatatattatgca 223  Q
    |||||||| ||||||||||| |||||||||||||||||| ||| |||| | ||||| |||||||||||||||    
T  52431925 agctcacatattttaaatgtggagaagtgaggtgtttggggtttgaacccggtccc-tgcatatattatgca 52431855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 142 - 216
Target Start/End: Original strand, 18512533 - 18512607
Alignment:
Q  142 tagtggttggagctcacacattttaaatgtagagaagtgaggtgtttggagttcgaactccgtcccgtgcatata 216  Q
    |||||| ||||||||||||||||||||||| |||||||| |||||  || |||||||| ||| ||| ||||||||    
T  18512533 tagtggctggagctcacacattttaaatgtggagaagtggggtgtccggggttcgaaccccggcccctgcatata 18512607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 142 - 223
Target Start/End: Original strand, 36313938 - 36314018
Alignment:
Q  142 tagtggttggagctcacacattttaaatgtagagaagtgaggtgtttggagttcgaactccgtcccgtgcatatattatgca 223  Q
    |||||||||||||||||||||| ||| ||| |||||||| |||||| || |||||||||||| ||| |||| ||| ||||||    
T  36313938 tagtggttggagctcacacattataa-tgtggagaagtggggtgttcggggttcgaactccggcccctgcaaataatatgca 36314018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 142 - 223
Target Start/End: Original strand, 37662515 - 37662596
Alignment:
Q  142 tagtggttggagctcacacattttaaatgtagagaagtgaggtgtttggagttcgaactccgtcccgtgcatatattatgca 223  Q
    |||||||||||||||||||| ||||| |||||||||||| |||||  || ||||| || ||| ||| |||||||| ||||||    
T  37662515 tagtggttggagctcacacaatttaactgtagagaagtggggtgtccggggttcgtaccccgacccctgcatataatatgca 37662596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 142 - 186
Target Start/End: Complemental strand, 12613289 - 12613245
Alignment:
Q  142 tagtggttggagctcacacattttaaatgtagagaagtgaggtgt 186  Q
    ||||| ||||||||||||||||||||||||||||||||| |||||    
T  12613289 tagtgattggagctcacacattttaaatgtagagaagtggggtgt 12613245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 142 - 221
Target Start/End: Complemental strand, 8741585 - 8741506
Alignment:
Q  142 tagtggttggagctcacacattttaaatgtagagaagtgaggtgtttggagttcgaactccgtcccgtgcatatattatg 221  Q
    |||||||||||||||||||||| ||||||| |||||||| |||||  || |||||||| ||  ||| |||||| ||||||    
T  8741585 tagtggttggagctcacacattataaatgtggagaagtggggtgtcaggggttcgaacccctgcccctgcataaattatg 8741506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 142 - 223
Target Start/End: Original strand, 4865780 - 4865861
Alignment:
Q  142 tagtggttggagctcacacattttaaatgtagagaagtgaggtgtttggagttcgaactccgtcccgtgcatatattatgca 223  Q
    ||||||||| |||||||| || ||||||||  |||||||  ||||| || |||||||||||| ||| | |||||||||||||    
T  4865780 tagtggttgtagctcacatatattaaatgtgaagaagtggagtgttcggggttcgaactccgacccctacatatattatgca 4865861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 131 - 223
Target Start/End: Original strand, 1604171 - 1604263
Alignment:
Q  131 gtcaaataacatagtggttggagctcacacattttaaatgtagagaagtgaggtgtttggagttcgaactccgtcccgtgcatatattatgca 223  Q
    ||||| |||| |||||||| ||||||||||||||||||||| ||||| || |||||   | |||||||| ||| ||| | |||||| ||||||    
T  1604171 gtcaactaacctagtggttagagctcacacattttaaatgtggagaattgtggtgtcaagggttcgaaccccgacccctacatataatatgca 1604263  T

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Target: chr1; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 151 - 223
Target Start/End: Original strand, 7180581 - 7180653
Alignment:
Q  151 gagctcacacattttaaatgtagagaagtgaggtgtttggagttcgaactccgtcccgtgcatatattatgca 223  Q
    ||||||||||| ||||| ||| |||||||| |||||  || |||||||||||| ||| |||||||| ||||||    
T  7180581 gagctcacacaatttaattgtggagaagtggggtgtccggggttcgaactccggcccctgcatataatatgca 7180653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 151 - 223
Target Start/End: Complemental strand, 23234054 - 23233982
Alignment:
Q  151 gagctcacacattttaaatgtagagaagtgaggtgtttggagttcgaactccgtcccgtgcatatattatgca 223  Q
    ||||||||||||| ||||||| |||||||  ||||| ||| |||||||| ||| ||| |||||||| ||||||    
T  23234054 gagctcacacattataaatgtggagaagtagggtgtctggggttcgaaccccgacccctgcatataatatgca 23233982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 151 - 223
Target Start/End: Original strand, 35605590 - 35605662
Alignment:
Q  151 gagctcacacattttaaatgtagagaagtgaggtgtttggagttcgaactccgtcccgtgcatatattatgca 223  Q
    ||||||||||| ||||| ||| |||||||| ||||||| | |||||||| ||| ||| |||||||| ||||||    
T  35605590 gagctcacacaatttaattgtggagaagtggggtgtttagggttcgaaccccgacccctgcatataatatgca 35605662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 157 - 221
Target Start/End: Complemental strand, 45518422 - 45518358
Alignment:
Q  157 acacattttaaatgtagagaagtgaggtgtttggagttcgaactccgtcccgtgcatatattatg 221  Q
    |||||||||||||||||||||||||||||| ||  ||||||||  ||  || |||||||||||||    
T  45518422 acacattttaaatgtagagaagtgaggtgtatgaggttcgaacctcgatccctgcatatattatg 45518358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 142 - 221
Target Start/End: Original strand, 27579432 - 27579511
Alignment:
Q  142 tagtggttggagctcacacattttaaatgtagagaagtgaggtgtttggagttcgaactccgtcccgtgcatatattatg 221  Q
    |||||| | ||||||||||||||||||||| ||||| || ||||| | | ||||||||| || ||| |||||||| ||||    
T  27579432 tagtggctagagctcacacattttaaatgtggagaaatggggtgtctagggttcgaacttcggcccctgcatataatatg 27579511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 142 - 180
Target Start/End: Complemental strand, 13763873 - 13763835
Alignment:
Q  142 tagtggttggagctcacacattttaaatgtagagaagtg 180  Q
    |||||| || |||||||||||||||||||||||||||||    
T  13763873 tagtggctgaagctcacacattttaaatgtagagaagtg 13763835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 142 - 216
Target Start/End: Complemental strand, 18911963 - 18911889
Alignment:
Q  142 tagtggttggagctcacacattttaaatgtagagaagtgaggtgtttggagttcgaactccgtcccgtgcatata 216  Q
    |||||| ||||||||||||||||||||||| ||| |||| |||||  || |||||||| | | ||| ||||||||    
T  18911963 tagtggctggagctcacacattttaaatgtggaggagtggggtgtccggggttcgaaccctgacccctgcatata 18911889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 142 - 180
Target Start/End: Original strand, 45180480 - 45180518
Alignment:
Q  142 tagtggttggagctcacacattttaaatgtagagaagtg 180  Q
    |||||| ||||||||||||||| ||||||||||||||||    
T  45180480 tagtggctggagctcacacattataaatgtagagaagtg 45180518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 142 - 220
Target Start/End: Complemental strand, 51137895 - 51137818
Alignment:
Q  142 tagtggttggagctcacacattttaaatgtagagaagtgaggtgtttggagttcgaactccgtcccgtgcatatattat 220  Q
    ||||||||||||||| ||||||| |||||| |||||||| | |||   |||||||||||||| ||| |||||| |||||    
T  51137895 tagtggttggagctcgcacattt-aaatgtggagaagtgggatgtccagagttcgaactccggcccctgcataaattat 51137818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 142 - 223
Target Start/End: Complemental strand, 7191144 - 7191063
Alignment:
Q  142 tagtggttggagctcacacattttaaatgtagagaagtgaggtgtttggagttcgaactccgtcccgtgcatatattatgca 223  Q
    |||||| | ||||||||||| ||||| ||| ||||||||||||||  || |||||||| ||  ||| |||||||| ||||||    
T  7191144 tagtggctagagctcacacaatttaattgtggagaagtgaggtgtccggggttcgaaccccagcccctgcatataatatgca 7191063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 142 - 223
Target Start/End: Complemental strand, 11344550 - 11344469
Alignment:
Q  142 tagtggttggagctcacacattttaaatgtagagaagtgaggtgtttggagttcgaactccgtcccgtgcatatattatgca 223  Q
    |||||| || ||||||||||| || ||||| ||||||||||||||   | |||||||||||| ||  | |||||||||||||    
T  11344550 tagtggctgaagctcacacatatttaatgtggagaagtgaggtgtccagggttcgaactccggcctctacatatattatgca 11344469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 142 - 223
Target Start/End: Complemental strand, 11502570 - 11502489
Alignment:
Q  142 tagtggttggagctcacacattttaaatgtagagaagtgaggtgtttggagttcgaactccgtcccgtgcatatattatgca 223  Q
    |||||| || ||||||||||| || ||||| ||||||||||||||   | |||||||||||| ||  | |||||||||||||    
T  11502570 tagtggctgaagctcacacatatttaatgtggagaagtgaggtgtccagggttcgaactccggcctctacatatattatgca 11502489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 142 - 223
Target Start/End: Complemental strand, 21265768 - 21265687
Alignment:
Q  142 tagtggttggagctcacacattttaaatgtagagaagtgaggtgtttggagttcgaactccgtcccgtgcatatattatgca 223  Q
    |||||| | ||||||||||| ||||| ||| |||||||| |||||  || |||||||| ||| ||| |||||||| ||||||    
T  21265768 tagtggctagagctcacacaatttaattgtggagaagtggggtgtccggggttcgaaccccggcccctgcatataatatgca 21265687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 142 - 223
Target Start/End: Complemental strand, 33033238 - 33033157
Alignment:
Q  142 tagtggttggagctcacacattttaaatgtagagaagtgaggtgtttggagttcgaactccgtcccgtgcatatattatgca 223  Q
    |||||||| ||||||||||||||||| ||| ||||| || ||||| | | |||||||| |||  || |||||||| ||||||    
T  33033238 tagtggttagagctcacacattttaattgtggagaaatggggtgtctagggttcgaaccccggtccctgcatataatatgca 33033157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 131 - 223
Target Start/End: Original strand, 1195229 - 1195321
Alignment:
Q  131 gtcaaataacatagtggttggagctcacacattttaaatgtagagaagtgaggtgtttggagttcgaactccgtcccgtgcatatattatgca 223  Q
    |||||||| | ||||| ||| |||||||| ||||||||| |  |||||||||||||| |  ||||||  | || ||| |||||||||||||||    
T  1195229 gtcaaatagcctagtgattgtagctcacatattttaaatatgcagaagtgaggtgttagaggttcgattttcggcccctgcatatattatgca 1195321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 142 - 186
Target Start/End: Original strand, 4553504 - 4553548
Alignment:
Q  142 tagtggttggagctcacacattttaaatgtagagaagtgaggtgt 186  Q
    |||||||| ||||||||||| ||||| ||| ||||||||||||||    
T  4553504 tagtggttagagctcacacaatttaattgtggagaagtgaggtgt 4553548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 142 - 186
Target Start/End: Original strand, 5430997 - 5431041
Alignment:
Q  142 tagtggttggagctcacacattttaaatgtagagaagtgaggtgt 186  Q
    |||||| ||||||||||||||||||||||| || ||||| |||||    
T  5430997 tagtggctggagctcacacattttaaatgtggataagtggggtgt 5431041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 151 - 223
Target Start/End: Complemental strand, 11333766 - 11333695
Alignment:
Q  151 gagctcacacattttaaatgtagagaagtgaggtgtttggagttcgaactccgtcccgtgcatatattatgca 223  Q
    ||||||||||| || |||||| |||||||| |||||  || |||||||||||| ||| |||||| ||||||||    
T  11333766 gagctcacacaatt-aaatgtggagaagtggggtgtccggggttcgaactccggcccctgcataaattatgca 11333695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 151 - 223
Target Start/End: Complemental strand, 11491787 - 11491716
Alignment:
Q  151 gagctcacacattttaaatgtagagaagtgaggtgtttggagttcgaactccgtcccgtgcatatattatgca 223  Q
    ||||||||||| || |||||| |||||||| |||||  || |||||||||||| ||| |||||| ||||||||    
T  11491787 gagctcacacaatt-aaatgtggagaagtggggtgtccggggttcgaactccggcccctgcataaattatgca 11491716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 151 - 223
Target Start/End: Complemental strand, 36860701 - 36860629
Alignment:
Q  151 gagctcacacattttaaatgtagagaagtgaggtgtttggagttcgaactccgtcccgtgcatatattatgca 223  Q
    ||||||||||||||||||||| |||||||| |||||  || ||||| || ||| ||  |||||||| ||||||    
T  36860701 gagctcacacattttaaatgtggagaagtggggtgtccggggttcggaccccggcctctgcatataatatgca 36860629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 149 - 221
Target Start/End: Complemental strand, 41998453 - 41998381
Alignment:
Q  149 tggagctcacacattttaaatgtagagaagtgaggtgtttggagttcgaactccgtcccgtgcatatattatg 221  Q
    ||||||||||||||||||||||| |||||||  ||||| | | |||||||| ||| ||  || ||||||||||    
T  41998453 tggagctcacacattttaaatgtggagaagtagggtgtctagggttcgaaccccgaccgttgtatatattatg 41998381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 50; Significance: 1e-19; HSPs: 28)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 131 - 216
Target Start/End: Complemental strand, 18254712 - 18254627
Alignment:
Q  131 gtcaaataacatagtggttggagctcacacattttaaatgtagagaagtgaggtgtttggagttcgaactccgtcccgtgcatata 216  Q
    ||||| |||| ||||||||||||||||||||||||||||||  ||||||| ||||| |||||||||||| ||| ||| ||||||||    
T  18254712 gtcaagtaacctagtggttggagctcacacattttaaatgtgaagaagtggggtgtctggagttcgaaccccggcccctgcatata 18254627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 142 - 199
Target Start/End: Complemental strand, 15939401 - 15939344
Alignment:
Q  142 tagtggttggagctcacacattttaaatgtagagaagtgaggtgtttggagttcgaac 199  Q
    |||||| ||||||||||||||||||||||| |||||||| |||||| || ||||||||    
T  15939401 tagtggctggagctcacacattttaaatgtggagaagtggggtgttcggggttcgaac 15939344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 142 - 223
Target Start/End: Complemental strand, 39635412 - 39635331
Alignment:
Q  142 tagtggttggagctcacacattttaaatgtagagaagtgaggtgtttggagttcgaactccgtcccgtgcatatattatgca 223  Q
    |||||| ||||| ||||||||||||||||| ||||||||  |||| |||||||||||| ||| |||   |||||||||||||    
T  39635412 tagtggctggagatcacacattttaaatgtggagaagtggagtgtctggagttcgaaccccgaccccaacatatattatgca 39635331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 142 - 216
Target Start/End: Complemental strand, 5947978 - 5947904
Alignment:
Q  142 tagtggttggagctcacacattttaaatgtagagaagtgaggtgtttggagttcgaactccgtcccgtgcatata 216  Q
    |||||| ||||||||||||||||||||||| ||| |||| |||||  || |||||||| ||| ||| ||||||||    
T  5947978 tagtggctggagctcacacattttaaatgtggaggagtggggtgtccggggttcgaaccccgacccctgcatata 5947904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 142 - 216
Target Start/End: Complemental strand, 32854644 - 32854570
Alignment:
Q  142 tagtggttggagctcacacattttaaatgtagagaagtgaggtgtttggagttcgaactccgtcccgtgcatata 216  Q
    |||||| ||||||||||||||||||||||| |||||||  |||||  || |||||||| ||| ||| ||||||||    
T  32854644 tagtggctggagctcacacattttaaatgtggagaagtagggtgtccggggttcgaaccccggcccttgcatata 32854570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 142 - 223
Target Start/End: Original strand, 8250259 - 8250340
Alignment:
Q  142 tagtggttggagctcacacattttaaatgtagagaagtgaggtgtttggagttcgaactccgtcccgtgcatatattatgca 223  Q
    |||||||| ||||||||||| ||||| ||| |||| |||| |||| ||| |||||||| ||| ||| |||||||| ||||||    
T  8250259 tagtggttagagctcacacaatttaattgtggagaggtgaagtgtctggggttcgaaccccggcccctgcatataatatgca 8250340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 146 - 187
Target Start/End: Complemental strand, 38533656 - 38533615
Alignment:
Q  146 ggttggagctcacacattttaaatgtagagaagtgaggtgtt 187  Q
    |||||| ||||||||||||||||||| |||||||||||||||    
T  38533656 ggttggtgctcacacattttaaatgttgagaagtgaggtgtt 38533615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 131 - 223
Target Start/End: Complemental strand, 28194755 - 28194663
Alignment:
Q  131 gtcaaataacatagtggttggagctcacacattttaaatgtagagaagtgaggtgtttggagttcgaactccgtcccgtgcatatattatgca 223  Q
    |||||||| | |||||| | ||||||||||| ||||| ||| |||||||| |||||  || |||||||||||  ||| |||||||| ||||||    
T  28194755 gtcaaatagcctagtggctagagctcacacaatttaattgtggagaagtggggtgtccggggttcgaactccagcccctgcatataatatgca 28194663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 149 - 213
Target Start/End: Complemental strand, 36748991 - 36748927
Alignment:
Q  149 tggagctcacacattttaaatgtagagaagtgaggtgtttggagttcgaactccgtcccgtgcat 213  Q
    ||||||||||||||||||||||| ||||||||  ||||| | ||||||||| ||| ||| |||||    
T  36748991 tggagctcacacattttaaatgtggagaagtggagtgttcgaagttcgaaccccgacccctgcat 36748927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 151 - 199
Target Start/End: Original strand, 44898449 - 44898497
Alignment:
Q  151 gagctcacacattttaaatgtagagaagtgaggtgtttggagttcgaac 199  Q
    ||||||||||||||||||||| |||||||| |||||  |||||||||||    
T  44898449 gagctcacacattttaaatgtggagaagtggggtgtccggagttcgaac 44898497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 150 - 216
Target Start/End: Original strand, 10463160 - 10463229
Alignment:
Q  150 ggagctcacacattttaaatgtagagaagt---gaggtgtttggagttcgaactccgtcccgtgcatata 216  Q
    ||||||||||||||||||||||||||||||   | |||||| || |||||||| ||| ||| ||||||||    
T  10463160 ggagctcacacattttaaatgtagagaagtgggggggtgttcggggttcgaaccccggcccctgcatata 10463229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 155 - 202
Target Start/End: Original strand, 13424056 - 13424103
Alignment:
Q  155 tcacacattttaaatgtagagaagtgaggtgtttggagttcgaactcc 202  Q
    ||||||||||||||||| |||||||||| ||||||  |||||||||||    
T  13424056 tcacacattttaaatgtggagaagtgagatgtttgatgttcgaactcc 13424103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 142 - 201
Target Start/End: Original strand, 32857905 - 32857964
Alignment:
Q  142 tagtggttggagctcacacattttaaatgtagagaagtgaggtgtttggagttcgaactc 201  Q
    |||||||| |||||||||||| |||||||| |||||||  ||||||||  ||||||||||    
T  32857905 tagtggtttgagctcacacatattaaatgtggagaagttgggtgtttgtggttcgaactc 32857964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 150 - 216
Target Start/End: Original strand, 7717571 - 7717637
Alignment:
Q  150 ggagctcacacattttaaatgtagagaagtgaggtgtttggagttcgaactccgtcccgtgcatata 216  Q
    |||||||||||||||||||||| ||||||||  ||||  | ||||||||| ||| ||| ||||||||    
T  7717571 ggagctcacacattttaaatgtggagaagtggagtgtccgaagttcgaaccccgacccctgcatata 7717637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 142 - 216
Target Start/End: Original strand, 23984181 - 23984255
Alignment:
Q  142 tagtggttggagctcacacattttaaatgtagagaagtgaggtgtttggagttcgaactccgtcccgtgcatata 216  Q
    |||||| ||||| ||||||||||||||||| |||||||| |||||  || |||||||| | | ||| ||||||||    
T  23984181 tagtggctggagttcacacattttaaatgtggagaagtggggtgtccggggttcgaaccctggcccctgcatata 23984255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 153 - 187
Target Start/End: Complemental strand, 38534172 - 38534138
Alignment:
Q  153 gctcacacattttaaatgtagagaagtgaggtgtt 187  Q
    ||||||||||||||||||| |||||||||||||||    
T  38534172 gctcacacattttaaatgttgagaagtgaggtgtt 38534138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 142 - 223
Target Start/End: Complemental strand, 3596361 - 3596281
Alignment:
Q  142 tagtggttggagctcacacattttaaatgtagagaagtgaggtgtttggagttcgaactccgtcccgtgcatatattatgca 223  Q
    |||||| |||||||||||||  |||||||| |||||||| |||||  || |||||||| ||| ||| |||||| ||||||||    
T  3596361 tagtggctggagctcacaca-attaaatgtggagaagtggggtgtccggggttcgaaccccgacccctgcataaattatgca 3596281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 142 - 223
Target Start/End: Complemental strand, 5613066 - 5612985
Alignment:
Q  142 tagtggttggagctcacacattttaaatgtagagaagtgaggtgtttggagttcgaactccgtcccgtgcatatattatgca 223  Q
    |||||||| ||||||||||| || || ||| |||||||| |||||  || |||||||| ||| ||| |||||||| ||||||    
T  5613066 tagtggttagagctcacacaattaaattgtggagaagtggggtgtccggggttcgaaccccggcccttgcatataatatgca 5612985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 142 - 199
Target Start/End: Complemental strand, 6973463 - 6973407
Alignment:
Q  142 tagtggttggagctcacacattttaaatgtagagaagtgaggtgtttggagttcgaac 199  Q
    ||||| || ||| ||||||||||||| | | |||||||||||||||||||||||||||    
T  6973463 tagtgattagagttcacacattttaatt-tggagaagtgaggtgtttggagttcgaac 6973407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 149 - 186
Target Start/End: Original strand, 20497160 - 20497197
Alignment:
Q  149 tggagctcacacattttaaatgtagagaagtgaggtgt 186  Q
    ||||||||||||||||||||||| |||||||| |||||    
T  20497160 tggagctcacacattttaaatgtggagaagtggggtgt 20497197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 142 - 223
Target Start/End: Original strand, 33228891 - 33228972
Alignment:
Q  142 tagtggttggagctcacacattttaaatgtagagaagtgaggtgtttggagttcgaactccgtcccgtgcatatattatgca 223  Q
    |||||| | ||||||||||| ||||| ||| |||||||| |||||  || |||||||| ||| ||| |||||||| ||||||    
T  33228891 tagtggctagagctcacacaatttaattgtggagaagtggggtgtccggggttcgaaccccggcccctgcatataatatgca 33228972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 159 - 220
Target Start/End: Original strand, 42998827 - 42998888
Alignment:
Q  159 acattttaaatgtagagaagtgaggtgtttggagttcgaactccgtcccgtgcatatattat 220  Q
    ||||||||||||  |||||||  |||||  ||||||||||||||| ||| ||||||||||||    
T  42998827 acattttaaatgcggagaagtcgggtgtccggagttcgaactccggcccctgcatatattat 42998888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 142 - 202
Target Start/End: Original strand, 7907501 - 7907561
Alignment:
Q  142 tagtggttggagctcacacattttaaatgtagagaagtgaggtgtttggagttcgaactcc 202  Q
    |||||||| || |||||||| || || |||||||||||| ||||||||  |||||||||||    
T  7907501 tagtggttagaactcacacaattaaattgtagagaagtggggtgtttgtggttcgaactcc 7907561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 142 - 214
Target Start/End: Complemental strand, 14518396 - 14518324
Alignment:
Q  142 tagtggttggagctcacacattttaaatgtagagaagtgaggtgtttggagttcgaactccgtcccgtgcata 214  Q
    |||||| ||||||||||||||||||||| | ||||||||  ||||| |  |||||||| ||| ||| ||||||    
T  14518396 tagtggctggagctcacacattttaaatatggagaagtggagtgttcgaggttcgaaccccggcccctgcata 14518324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 131 - 199
Target Start/End: Original strand, 15795916 - 15795984
Alignment:
Q  131 gtcaaataacatagtggttggagctcacacattttaaatgtagagaagtgaggtgtttggagttcgaac 199  Q
    |||||||||| |||||| |  | |||||||||||||||||| |||||||  | |||||||| |||||||    
T  15795916 gtcaaataacctagtggctataactcacacattttaaatgtggagaagtaggatgtttggaattcgaac 15795984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 151 - 199
Target Start/End: Original strand, 33549021 - 33549069
Alignment:
Q  151 gagctcacacattttaaatgtagagaagtgaggtgtttggagttcgaac 199  Q
    ||||||||||| ||||| ||| ||||||||| |||||||| ||||||||    
T  33549021 gagctcacacaatttaattgtggagaagtgaagtgtttggggttcgaac 33549069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 131 - 223
Target Start/End: Original strand, 39408637 - 39408729
Alignment:
Q  131 gtcaaataacatagtggttggagctcacacattttaaatgtagagaagtgaggtgtttggagttcgaactccgtcccgtgcatatattatgca 223  Q
    ||||| || |||||||| | ||||||||||| ||||| ||| ||||||||  |||| ||| |||||||| ||| | | |||||||| ||||||    
T  39408637 gtcaagtagcatagtggctagagctcacacaatttaattgtggagaagtggagtgtctggggttcgaaccccggctcttgcatataatatgca 39408729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 131 - 199
Target Start/End: Complemental strand, 42756288 - 42756221
Alignment:
Q  131 gtcaaataacatagtggttggagctcacacattttaaatgtagagaagtgaggtgtttggagttcgaac 199  Q
    ||||| ||||||| ||| | |||||||||| ||  ||||||||||||||| ||||| ||||||||||||    
T  42756288 gtcaagtaacataatggctagagctcacacgtta-aaatgtagagaagtggggtgtatggagttcgaac 42756221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 46; Significance: 2e-17; HSPs: 37)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 142 - 199
Target Start/End: Original strand, 885116 - 885173
Alignment:
Q  142 tagtggttggagctcacacattttaaatgtagagaagtgaggtgtttggagttcgaac 199  Q
    |||||||||||||||||||||||||||| | ||||||||||||||| |||||||||||    
T  885116 tagtggttggagctcacacattttaaatatggagaagtgaggtgttcggagttcgaac 885173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 142 - 223
Target Start/End: Complemental strand, 8241162 - 8241081
Alignment:
Q  142 tagtggttggagctcacacattttaaatgtagagaagtgaggtgtttggagttcgaactccgtcccgtgcatatattatgca 223  Q
    |||||||| ||||||||||||||||||||| |||||||| |||||  || |||||||| ||| ||| |||||||| ||||||    
T  8241162 tagtggttagagctcacacattttaaatgtggagaagtggggtgtccggggttcgaaccccgacccttgcatataatatgca 8241081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 142 - 186
Target Start/End: Original strand, 34434258 - 34434302
Alignment:
Q  142 tagtggttggagctcacacattttaaatgtagagaagtgaggtgt 186  Q
    |||||||||||||||||||||||||||||||||||| ||||||||    
T  34434258 tagtggttggagctcacacattttaaatgtagagaaatgaggtgt 34434302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 142 - 216
Target Start/End: Complemental strand, 3741066 - 3740992
Alignment:
Q  142 tagtggttggagctcacacattttaaatgtagagaagtgaggtgtttggagttcgaactccgtcccgtgcatata 216  Q
    |||||| ||||||||||||||||||||||| |||||||| |||||  || |||||||| ||| ||| ||||||||    
T  3741066 tagtggctggagctcacacattttaaatgtggagaagtggggtgtccggggttcgaaccccgacccctgcatata 3740992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 142 - 216
Target Start/End: Complemental strand, 29499287 - 29499213
Alignment:
Q  142 tagtggttggagctcacacattttaaatgtagagaagtgaggtgtttggagttcgaactccgtcccgtgcatata 216  Q
    |||||||| ||||| ||||||||||||| | |||| ||  |||||||||||||||||||||| ||| ||||||||    
T  29499287 tagtggttagagcttacacattttaaatatggagaggtagggtgtttggagttcgaactccgacccctgcatata 29499213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 137 - 186
Target Start/End: Original strand, 4418295 - 4418344
Alignment:
Q  137 taacatagtggttggagctcacacattttaaatgtagagaagtgaggtgt 186  Q
    |||| |||||||||||||||||||||||||||||| ||||| ||||||||    
T  4418295 taacctagtggttggagctcacacattttaaatgtggagaaatgaggtgt 4418344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 142 - 202
Target Start/End: Original strand, 33372960 - 33373019
Alignment:
Q  142 tagtggttggagctcacacattttaaatgtagagaagtgaggtgtttggagttcgaactcc 202  Q
    |||||| ||||||| ||||||||||||||| |||||||| |||||| ||||||||||||||    
T  33372960 tagtggctggagcttacacattttaaatgtggagaagtg-ggtgttcggagttcgaactcc 33373019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 131 - 186
Target Start/End: Original strand, 7545345 - 7545400
Alignment:
Q  131 gtcaaataacatagtggttggagctcacacattttaaatgtagagaagtgaggtgt 186  Q
    ||||| ||||||||||||| | ||||||||||||||||||| |||||||| |||||    
T  7545345 gtcaagtaacatagtggttagcgctcacacattttaaatgtggagaagtggggtgt 7545400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 132 - 186
Target Start/End: Complemental strand, 14970401 - 14970347
Alignment:
Q  132 tcaaataacatagtggttggagctcacacattttaaatgtagagaagtgaggtgt 186  Q
    |||| |||| ||||| |||||||| |||||||||||||||||||||||| |||||    
T  14970401 tcaagtaacctagtgattggagcttacacattttaaatgtagagaagtggggtgt 14970347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 142 - 199
Target Start/End: Original strand, 5195103 - 5195160
Alignment:
Q  142 tagtggttggagctcacacattttaaatgtagagaagtgaggtgtttggagttcgaac 199  Q
    |||| |||||| |||||||||||||||| |||||||||||||||| ||  ||||||||    
T  5195103 tagtagttggaactcacacattttaaatatagagaagtgaggtgtctgaggttcgaac 5195160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 142 - 223
Target Start/End: Original strand, 6734697 - 6734777
Alignment:
Q  142 tagtggttggagctcacacattttaaatgtagagaagtgaggtgtttggagttcgaactccgtcccgtgcatatattatgca 223  Q
    |||||| ||||||||||||||||||||||| |||||||| |||||  ||| ||||||  ||| ||| | |||||||||||||    
T  6734697 tagtggctggagctcacacattttaaatgtggagaagtggggtgtcggga-ttcgaaacccggcccctacatatattatgca 6734777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 150 - 223
Target Start/End: Original strand, 17693153 - 17693224
Alignment:
Q  150 ggagctcacacattttaaatgtagagaagtgaggtgtttggagttcgaactccgtcccgtgcatatattatgca 223  Q
    ||||||||||||||| | ||||||||||||| ||||| ||| |||||||||||| ||| |||||| ||||||||    
T  17693153 ggagctcacacattt-agatgtagagaagtgcggtgtctggggttcgaactccgaccc-tgcataaattatgca 17693224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 131 - 220
Target Start/End: Original strand, 36564369 - 36564458
Alignment:
Q  131 gtcaaataacatagtggttggagctcacacattttaaatgtagagaagtgaggtgtttggagttcgaactccgtcccgtgcatatattat 220  Q
    ||||| ||||||||||  ||||||||||||||||||||| | |||| ||| |||||  |  |||||||||||| |||  |||||||||||    
T  36564369 gtcaagtaacatagtgactggagctcacacattttaaatatggagaggtggggtgtccgtggttcgaactccggccccagcatatattat 36564458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 142 - 186
Target Start/End: Complemental strand, 6167324 - 6167280
Alignment:
Q  142 tagtggttggagctcacacattttaaatgtagagaagtgaggtgt 186  Q
    |||||| | ||||||||||||||||||||| ||||||||||||||    
T  6167324 tagtggctagagctcacacattttaaatgtggagaagtgaggtgt 6167280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 142 - 186
Target Start/End: Complemental strand, 7443451 - 7443407
Alignment:
Q  142 tagtggttggagctcacacattttaaatgtagagaagtgaggtgt 186  Q
    |||||||||||||||||||||| ||||||| |||||||| |||||    
T  7443451 tagtggttggagctcacacattataaatgtggagaagtggggtgt 7443407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 151 - 223
Target Start/End: Complemental strand, 16745184 - 16745112
Alignment:
Q  151 gagctcacacattttaaatgtagagaagtgaggtgtttggagttcgaactccgtcccgtgcatatattatgca 223  Q
    ||||||||| | ||||| ||| |||||||| ||||| |||||||||||||||| ||| | |||||| ||||||    
T  16745184 gagctcacataatttaattgtggagaagtggggtgtctggagttcgaactccgacccctacatataatatgca 16745112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 151 - 223
Target Start/End: Original strand, 34729977 - 34730049
Alignment:
Q  151 gagctcacacattttaaatgtagagaagtgaggtgtttggagttcgaactccgtcccgtgcatatattatgca 223  Q
    ||||||||| |||||||||||  |||  |||||||| | |||||||||||||| ||| |||||||| ||||||    
T  34729977 gagctcacatattttaaatgttaagagatgaggtgtctagagttcgaactccgacccctgcatataatatgca 34730049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 131 - 223
Target Start/End: Complemental strand, 42320440 - 42320348
Alignment:
Q  131 gtcaaataacatagtggttggagctcacacattttaaatgtagagaagtgaggtgtttggagttcgaactccgtcccgtgcatatattatgca 223  Q
    ||||| |||| |||||| | ||||||||||| ||||| ||| ||||||||  ||||| || |||||||||||| | | |||||||| ||||||    
T  42320440 gtcaagtaacctagtggctagagctcacacaatttaattgtggagaagtggagtgttcggggttcgaactccgactcctgcatataatatgca 42320348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 142 - 221
Target Start/End: Original strand, 15241110 - 15241187
Alignment:
Q  142 tagtggttggagctcacacattttaaatgtagagaagtgaggtgtttggagttcgaactccgtcccgtgcatatattatg 221  Q
    |||||||| ||||||||||||||| ||||| ||||||||| || ||||| |||||||||||  ||| |||||||| ||||    
T  15241110 tagtggttagagctcacacatttt-aatgtggagaagtga-gtttttggggttcgaactccagcccatgcatataatatg 15241187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 142 - 216
Target Start/End: Original strand, 17891816 - 17891891
Alignment:
Q  142 tagtggttggagctcacacatttt-aaatgtagagaagtgaggtgtttggagttcgaactccgtcccgtgcatata 216  Q
    |||||| ||||||||||||||||| |||||| |||||||| |||||  || |||||||| ||| ||| ||||||||    
T  17891816 tagtggctggagctcacacattttaaaatgtggagaagtggggtgtccggggttcgaaccccggcccctgcatata 17891891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 142 - 181
Target Start/End: Complemental strand, 33383685 - 33383646
Alignment:
Q  142 tagtggttggagctcacacattttaaatgtagagaagtga 181  Q
    |||||||| ||||||||||||||||||||| |||||||||    
T  33383685 tagtggttagagctcacacattttaaatgttgagaagtga 33383646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 142 - 180
Target Start/End: Original strand, 3821379 - 3821417
Alignment:
Q  142 tagtggttggagctcacacattttaaatgtagagaagtg 180  Q
    |||||| ||||||||||||||||||||||| ||||||||    
T  3821379 tagtggctggagctcacacattttaaatgtggagaagtg 3821417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 151 - 201
Target Start/End: Original strand, 8752515 - 8752565
Alignment:
Q  151 gagctcacacattttaaatgtagagaagtgaggtgtttggagttcgaactc 201  Q
    |||||||||||||||||| || |||||||||| ||| ||| ||||||||||    
T  8752515 gagctcacacattttaaacgtggagaagtgagatgtgtggggttcgaactc 8752565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 142 - 216
Target Start/End: Original strand, 22228920 - 22228994
Alignment:
Q  142 tagtggttggagctcacacattttaaatgtagagaagtgaggtgtttggagttcgaactccgtcccgtgcatata 216  Q
    |||||||  ||||| ||||| ||||| ||||||||||||  ||||  ||||||||||||||| ||| ||||||||    
T  22228920 tagtggtcagagcttacacaatttaattgtagagaagtggagtgtccggagttcgaactccgacccctgcatata 22228994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 142 - 216
Target Start/End: Original strand, 23937891 - 23937965
Alignment:
Q  142 tagtggttggagctcacacattttaaatgtagagaagtgaggtgtttggagttcgaactccgtcccgtgcatata 216  Q
    |||||| || |||||||||||||||||||| ||| |||| |||||  || |||||||| ||| ||| ||||||||    
T  23937891 tagtggctgtagctcacacattttaaatgtggaggagtggggtgtccggggttcgaaccccggcccctgcatata 23937965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 142 - 199
Target Start/End: Original strand, 25460738 - 25460796
Alignment:
Q  142 tagtggttggagctcacaca-ttttaaatgtagagaagtgaggtgtttggagttcgaac 199  Q
    |||||||| ||||||||||| |||||||||| |||||||| |||||| || ||||||||    
T  25460738 tagtggttagagctcacacatttttaaatgtggagaagtggggtgttcggggttcgaac 25460796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 155 - 201
Target Start/End: Original strand, 39804417 - 39804463
Alignment:
Q  155 tcacacattttaaatgtagagaagtgaggtgtttggagttcgaactc 201  Q
    ||||||||||||||||||||||||||  |||| || |||||||||||    
T  39804417 tcacacattttaaatgtagagaagtggagtgtctgaagttcgaactc 39804463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 142 - 216
Target Start/End: Complemental strand, 41930217 - 41930143
Alignment:
Q  142 tagtggttggagctcacacattttaaatgtagagaagtgaggtgtttggagttcgaactccgtcccgtgcatata 216  Q
    |||||| | ||||||||||| ||||| |||||||||||| ||||| ||| |||||||| ||  ||| ||||||||    
T  41930217 tagtggctagagctcacacaatttaattgtagagaagtggggtgtctggggttcgaaccccagcccctgcatata 41930143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 150 - 223
Target Start/End: Original strand, 6234761 - 6234833
Alignment:
Q  150 ggagctcacacattttaaatgtagagaagtgaggtgtttggagttcgaactccgtcccgtgcatatattatgca 223  Q
    |||||||| | |||||||||||  |||||||  ||||||||||||||||| |  |||| |||||||||||||||    
T  6234761 ggagctcatatattttaaatgtgtagaagtggtgtgtttggagttcgaacccaatccc-tgcatatattatgca 6234833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 142 - 183
Target Start/End: Original strand, 16819263 - 16819304
Alignment:
Q  142 tagtggttggagctcacacattttaaatgtagagaagtgagg 183  Q
    |||||||||||| |||||||||||||||| | ||||||||||    
T  16819263 tagtggttggagttcacacattttaaatgcatagaagtgagg 16819304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 142 - 223
Target Start/End: Original strand, 39799988 - 39800069
Alignment:
Q  142 tagtggttggagctcacacattttaaatgtagagaagtgaggtgtttggagttcgaactccgtcccgtgcatatattatgca 223  Q
    |||||| || |||||||||||||||||||| |||||||| |||||  || |||||| | ||  ||| |||||| ||||||||    
T  39799988 tagtggctgaagctcacacattttaaatgtggagaagtggggtgtcaggggttcgagcccctgcccctgcataaattatgca 39800069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 131 - 223
Target Start/End: Complemental strand, 546925 - 546833
Alignment:
Q  131 gtcaaataacatagtggttggagctcacacattttaaatgtagagaagtgaggtgtttggagttcgaactccgtcccgtgcatatattatgca 223  Q
    |||||||| | |||||||| ||||||||||| ||||| |||  ||||||| | |||| |  |||||||| ||| ||| |||||||| ||||||    
T  546925 gtcaaatagcctagtggttagagctcacacaatttaattgtgaagaagtgggatgttcgaggttcgaaccccgacccctgcatataatatgca 546833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 151 - 223
Target Start/End: Complemental strand, 6558904 - 6558832
Alignment:
Q  151 gagctcacacattttaaatgtagagaagtgaggtgtttggagttcgaactccgtcccgtgcatatattatgca 223  Q
    ||||||||||| ||||| ||| |||||||  |||||  ||||||||||| ||| ||| |||||||| ||||||    
T  6558904 gagctcacacaatttaattgtggagaagtagggtgtccggagttcgaaccccgacccctgcatataatatgca 6558832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 151 - 223
Target Start/End: Complemental strand, 18928823 - 18928751
Alignment:
Q  151 gagctcacacattttaaatgtagagaagtgaggtgtttggagttcgaactccgtcccgtgcatatattatgca 223  Q
    ||||||||||| ||||||||| || |||||||||||  |  |||||||| ||| ||| |||||| ||||||||    
T  18928823 gagctcacacaatttaaatgtggaaaagtgaggtgtccgtggttcgaacaccgacccctgcataaattatgca 18928751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 151 - 223
Target Start/End: Original strand, 20707754 - 20707826
Alignment:
Q  151 gagctcacacattttaaatgtagagaagtgaggtgtttggagttcgaactccgtcccgtgcatatattatgca 223  Q
    ||||||||||| ||||| ||| ||||||||| |||| ||| |||||||| ||  ||| |||||||| ||||||    
T  20707754 gagctcacacaatttaattgtggagaagtgaagtgtctggggttcgaaccccaacccctgcatatagtatgca 20707826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 143 - 223
Target Start/End: Complemental strand, 24456298 - 24456220
Alignment:
Q  143 agtggttggagctcacacattttaaatgtagagaagtgaggtgtttggagttcgaactccgtcccgtgcatatattatgca 223  Q
    ||||| |||||||||||||||| || ||| |||||||| |||||  || |||||||||||| ||| |||||| ||||||||    
T  24456298 agtggctggagctcacacattt-aactgtggagaagtg-ggtgtccggggttcgaactccgacccctgcataaattatgca 24456220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 151 - 199
Target Start/End: Original strand, 30872342 - 30872390
Alignment:
Q  151 gagctcacacattttaaatgtagagaagtgaggtgtttggagttcgaac 199  Q
    |||||||||||| ||||||||| ||||||||  ||||| ||||||||||    
T  30872342 gagctcacacatattaaatgtaaagaagtgatttgtttagagttcgaac 30872390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 46; Significance: 2e-17; HSPs: 42)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 142 - 223
Target Start/End: Original strand, 25883946 - 25884027
Alignment:
Q  142 tagtggttggagctcacacattttaaatgtagagaagtgaggtgtttggagttcgaactccgtcccgtgcatatattatgca 223  Q
    |||||| ||||||||||||||||||||||| |||||||| |||||  || |||||||| ||| ||| |||||||||||||||    
T  25883946 tagtggctggagctcacacattttaaatgtggagaagtggggtgtccggggttcgaaccccgacccctgcatatattatgca 25884027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 142 - 216
Target Start/End: Original strand, 15085642 - 15085716
Alignment:
Q  142 tagtggttggagctcacacattttaaatgtagagaagtgaggtgtttggagttcgaactccgtcccgtgcatata 216  Q
    |||||| ||||||||||||||||||||| | ||||||||||||||  || |||||||| ||| ||| ||||||||    
T  15085642 tagtggctggagctcacacattttaaatatggagaagtgaggtgtccggggttcgaaccccgacccctgcatata 15085716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 142 - 216
Target Start/End: Original strand, 27329890 - 27329964
Alignment:
Q  142 tagtggttggagctcacacattttaaatgtagagaagtgaggtgtttggagttcgaactccgtcccgtgcatata 216  Q
    |||||| ||||||||||||||||||||||| |||||||| |||||  || |||||||| ||| ||| ||||||||    
T  27329890 tagtggctggagctcacacattttaaatgtggagaagtggggtgtccggggttcgaaccccggcccctgcatata 27329964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 142 - 216
Target Start/End: Original strand, 41253707 - 41253781
Alignment:
Q  142 tagtggttggagctcacacattttaaatgtagagaagtgaggtgtttggagttcgaactccgtcccgtgcatata 216  Q
    |||||| ||||||||||||||||||||| | || |||||||||||| || |||||||| ||| ||| ||||||||    
T  41253707 tagtggctggagctcacacattttaaatatggaaaagtgaggtgttcggggttcgaaccccggcccctgcatata 41253781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 142 - 216
Target Start/End: Original strand, 44625183 - 44625257
Alignment:
Q  142 tagtggttggagctcacacattttaaatgtagagaagtgaggtgtttggagttcgaactccgtcccgtgcatata 216  Q
    ||||||||||||||| |||||||||||||| |||||||| |||||  || |||||||| ||| ||| ||||||||    
T  44625183 tagtggttggagctcccacattttaaatgtggagaagtggggtgtccggggttcgaaccccggcccctgcatata 44625257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 142 - 216
Target Start/End: Complemental strand, 51879207 - 51879133
Alignment:
Q  142 tagtggttggagctcacacattttaaatgtagagaagtgaggtgtttggagttcgaactccgtcccgtgcatata 216  Q
    |||||| ||||||||||||||||||||||| |||||||| |||||  || |||||||| ||| ||| ||||||||    
T  51879207 tagtggctggagctcacacattttaaatgtggagaagtggggtgtccggggttcgaaccccggcccctgcatata 51879133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 142 - 187
Target Start/End: Original strand, 4808003 - 4808048
Alignment:
Q  142 tagtggttggagctcacacattttaaatgtagagaagtgaggtgtt 187  Q
    |||||||| |||||||||||||||||||||||||||||| ||||||    
T  4808003 tagtggttagagctcacacattttaaatgtagagaagtggggtgtt 4808048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 142 - 223
Target Start/End: Original strand, 23653175 - 23653255
Alignment:
Q  142 tagtggttggagctcacacattttaaatgtagagaagtgaggtgtttggagttcgaactccgtcccgtgcatatattatgca 223  Q
    |||||| | ||||||||||||||||| ||| || |||||||||||| || |||||||| ||| ||| |||||||||||||||    
T  23653175 tagtggctagagctcacacattttaa-tgtggataagtgaggtgttcggggttcgaaccccgacccctgcatatattatgca 23653255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 143 - 223
Target Start/End: Complemental strand, 14795222 - 14795142
Alignment:
Q  143 agtggttggagctcacacattttaaatgtagagaagtgaggtgtttggagttcgaactccgtcccgtgcatatattatgca 223  Q
    ||||||||||||||||||||||||||||| |||||||| |||||  || ||| |||| | | | | |||||||||||||||    
T  14795222 agtggttggagctcacacattttaaatgtggagaagtggggtgtccggggtttgaaccctggcacctgcatatattatgca 14795142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 142 - 198
Target Start/End: Original strand, 36472389 - 36472445
Alignment:
Q  142 tagtggttggagctcacacattttaaatgtagagaagtgaggtgtttggagttcgaa 198  Q
    |||||| ||||||||||||||||| ||||| |||||||| | |||||||||||||||    
T  36472389 tagtggctggagctcacacatttttaatgtggagaagtgggttgtttggagttcgaa 36472445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 142 - 186
Target Start/End: Complemental strand, 41710695 - 41710651
Alignment:
Q  142 tagtggttggagctcacacattttaaatgtagagaagtgaggtgt 186  Q
    |||||| ||||||||||||||||||||||| ||||||||||||||    
T  41710695 tagtggctggagctcacacattttaaatgtggagaagtgaggtgt 41710651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 145 - 223
Target Start/End: Complemental strand, 26880285 - 26880208
Alignment:
Q  145 tggttggagctcacacattttaaatgtagagaagtgaggtgtttggagttcgaactccgtcccgtgcatatattatgca 223  Q
    ||||| ||||||||||| ||||||||| |||||||| ||||| || ||||||||| ||| ||| |||||| ||||||||    
T  26880285 tggttagagctcacaca-tttaaatgtggagaagtggggtgtctgaagttcgaaccccgacccctgcataaattatgca 26880208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 142 - 216
Target Start/End: Original strand, 49028901 - 49028975
Alignment:
Q  142 tagtggttggagctcacacattttaaatgtagagaagtgaggtgtttggagttcgaactccgtcccgtgcatata 216  Q
    ||||||||||||||||| |||||||||||| ||||||||  ||||| || |||||||| |||  || ||||||||    
T  49028901 tagtggttggagctcacgcattttaaatgtggagaagtggagtgttcggggttcgaaccccggtccctgcatata 49028975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 149 - 186
Target Start/End: Complemental strand, 8488532 - 8488495
Alignment:
Q  149 tggagctcacacattttaaatgtagagaagtgaggtgt 186  Q
    ||||||||||||||||||||||| ||||||||||||||    
T  8488532 tggagctcacacattttaaatgtggagaagtgaggtgt 8488495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 149 - 198
Target Start/End: Complemental strand, 9114116 - 9114067
Alignment:
Q  149 tggagctcacacattttaaatgtagagaagtgaggtgtttggagttcgaa 198  Q
    ||||||||||||||||||||||| |||||||| ||||| |||| ||||||    
T  9114116 tggagctcacacattttaaatgtggagaagtggggtgtctggaattcgaa 9114067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 142 - 203
Target Start/End: Complemental strand, 32429859 - 32429798
Alignment:
Q  142 tagtggttggagctcacacattttaaatgtagagaagtgaggtgtttggagttcgaactccg 203  Q
    |||||||| ||||||||||| ||||| ||| |||||||| ||||| ||| ||||||||||||    
T  32429859 tagtggttagagctcacacaatttaattgtggagaagtggggtgtctggggttcgaactccg 32429798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 142 - 223
Target Start/End: Complemental strand, 35849592 - 35849512
Alignment:
Q  142 tagtggttggagctcacacattttaaatgtagagaagtgaggtgtttggagttcgaactccgtcccgtgcatatattatgca 223  Q
    |||||| |||||||||||||  |||||||  |||||||| ||||||||| |||||||| ||| ||| |||||| ||||||||    
T  35849592 tagtggctggagctcacaca-attaaatggggagaagtggggtgtttggggttcgaaccccggcccctgcataaattatgca 35849512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 131 - 180
Target Start/End: Complemental strand, 39709161 - 39709112
Alignment:
Q  131 gtcaaataacatagtggttggagctcacacattttaaatgtagagaagtg 180  Q
    ||||| |||| |||||| ||||||||||||||||||||||| ||||||||    
T  39709161 gtcaattaacctagtggctggagctcacacattttaaatgtggagaagtg 39709112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 142 - 199
Target Start/End: Complemental strand, 48546285 - 48546228
Alignment:
Q  142 tagtggttggagctcacacattttaaatgtagagaagtgaggtgtttggagttcgaac 199  Q
    |||||||| ||||||||||| ||||| ||||||||||||||||||  || ||||||||    
T  48546285 tagtggttagagctcacacaatttaattgtagagaagtgaggtgtccggggttcgaac 48546228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 142 - 223
Target Start/End: Original strand, 49443382 - 49443462
Alignment:
Q  142 tagtggttggagctcacacattttaaatgtagagaagtgaggtgtttggagttcgaactccgtcccgtgcatatattatgca 223  Q
    |||||| | |||||||||||||| |||||| |||||||| |||||  || |||||||||||| ||| |||||| ||||||||    
T  49443382 tagtggctagagctcacacattt-aaatgtggagaagtggggtgtccggggttcgaactccggcccctgcataaattatgca 49443462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 143 - 223
Target Start/End: Complemental strand, 23090364 - 23090284
Alignment:
Q  143 agtggttggagctcacacattttaaatgtagagaagtgaggtgtttggagttcgaactccgtcccgtgcatatattatgca 223  Q
    ||||| |||||||||||||||||  |||| |||||||| ||||| |||  ||||||| ||| ||  |||||||||||||||    
T  23090364 agtggctggagctcacacattttttatgtggagaagtggggtgtctgggattcgaaccccgaccattgcatatattatgca 23090284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 131 - 223
Target Start/End: Original strand, 34102558 - 34102650
Alignment:
Q  131 gtcaaataacatagtggttggagctcacacattttaaatgtagagaagtgaggtgtttggagttcgaactccgtcccgtgcatatattatgca 223  Q
    ||||| |||| |||||| | ||||||||||| ||||| ||| |||||||| |||||  || |||||||| ||| ||| |||||||| ||||||    
T  34102558 gtcaagtaacctagtggctagagctcacacagtttaattgtggagaagtggggtgtccggggttcgaaccccggcccctgcatataatatgca 34102650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 142 - 221
Target Start/End: Original strand, 46336460 - 46336539
Alignment:
Q  142 tagtggttggagctcacacattttaaatgtagagaagtgaggtgtttggagttcgaactccgtcccgtgcatatattatg 221  Q
    ||||||||||| ||||||||| |  ||||| || ||||| |||||| || |||||||| ||| ||| |||||||||||||    
T  46336460 tagtggttggaactcacacatatataatgtggaaaagtggggtgttcggggttcgaaccccgacccctgcatatattatg 46336539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 149 - 203
Target Start/End: Complemental strand, 10828575 - 10828521
Alignment:
Q  149 tggagctcacacattttaaatgtagagaagtgaggtgtttggagttcgaactccg 203  Q
    |||| |||||||||||| ||||| |||||||| ||||| ||| ||||||||||||    
T  10828575 tggaactcacacatttttaatgtggagaagtggggtgtctggggttcgaactccg 10828521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 142 - 180
Target Start/End: Complemental strand, 46767455 - 46767417
Alignment:
Q  142 tagtggttggagctcacacattttaaatgtagagaagtg 180  Q
    |||||| ||||||||||||||||||||||| ||||||||    
T  46767455 tagtggctggagctcacacattttaaatgtggagaagtg 46767417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 149 - 223
Target Start/End: Original strand, 46844937 - 46845010
Alignment:
Q  149 tggagctcacacattttaaatgtagagaagtgaggtgtttggagttcgaactccgtcccgtgcatatattatgca 223  Q
    |||||||||||||||| |||||| |||||||  |||||  || |||||||||||| ||| |||||| ||||||||    
T  46844937 tggagctcacacattt-aaatgtggagaagtagggtgtccggggttcgaactccgacccctgcataaattatgca 46845010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 142 - 199
Target Start/End: Complemental strand, 4860273 - 4860216
Alignment:
Q  142 tagtggttggagctcacacattttaaatgtagagaagtgaggtgtttggagttcgaac 199  Q
    |||||||| ||||||||||| ||||| ||| |||||||| ||||| ||| ||||||||    
T  4860273 tagtggttagagctcacacaatttaattgtggagaagtggggtgtctggggttcgaac 4860216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 142 - 199
Target Start/End: Complemental strand, 4880281 - 4880224
Alignment:
Q  142 tagtggttggagctcacacattttaaatgtagagaagtgaggtgtttggagttcgaac 199  Q
    |||||||| ||||||||||| ||||| ||| |||||||| ||||| ||| ||||||||    
T  4880281 tagtggttagagctcacacaatttaattgtggagaagtggggtgtctggggttcgaac 4880224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 145 - 194
Target Start/End: Complemental strand, 16991945 - 16991896
Alignment:
Q  145 tggttggagctcacacattttaaatgtagagaagtgaggtgtttggagtt 194  Q
    |||||| |||||||||||||||||| | |||||||||| ||| |||||||    
T  16991945 tggttgtagctcacacattttaaatatggagaagtgagatgtctggagtt 16991896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 131 - 216
Target Start/End: Complemental strand, 19879324 - 19879239
Alignment:
Q  131 gtcaaataacatagtggttggagctcacacattttaaatgtagagaagtgaggtgtttggagttcgaactccgtcccgtgcatata 216  Q
    ||||| || |||||||| | ||||||||||| ||||| |||  ||||||| |||||| || |||||||| ||| ||| ||||||||    
T  19879324 gtcaagtagcatagtggctagagctcacacaatttaattgtgaagaagtggggtgttcggggttcgaaccccggcccctgcatata 19879239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 142 - 216
Target Start/End: Complemental strand, 34102180 - 34102104
Alignment:
Q  142 tagtggttggagctcacaca--ttttaaatgtagagaagtgaggtgtttggagttcgaactccgtcccgtgcatata 216  Q
    ||||||||||||||||||||  |||||||||| ||||| ||||||||  || |||||||| ||  ||| ||||||||    
T  34102180 tagtggttggagctcacacattttttaaatgtggagaaatgaggtgtccggggttcgaaccccagcccctgcatata 34102104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 142 - 223
Target Start/End: Complemental strand, 39720047 - 39719966
Alignment:
Q  142 tagtggttggagctcacacattttaaatgtagagaagtgaggtgtttggagttcgaactccgtcccgtgcatatattatgca 223  Q
    |||||| | ||||||||||| ||||| ||| |||||||| |||||  || |||||||| ||| ||| |||||||| ||||||    
T  39720047 tagtggctagagctcacacaatttaattgtggagaagtggggtgtccggggttcgaaccccggcccctgcatataatatgca 39719966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 142 - 223
Target Start/End: Original strand, 41936365 - 41936446
Alignment:
Q  142 tagtggttggagctcacacattttaaatgtagagaagtgaggtgtttggagttcgaactccgtcccgtgcatatattatgca 223  Q
    |||||| | ||||||||||| ||||| ||| |||||||| |||||  || |||||||| ||| ||| |||||||| ||||||    
T  41936365 tagtggctagagctcacacaatttaattgtggagaagtggggtgtccggggttcgaaccccggcccctgcatataatatgca 41936446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 142 - 223
Target Start/End: Complemental strand, 47098844 - 47098763
Alignment:
Q  142 tagtggttggagctcacacattttaaatgtagagaagtgaggtgtttggagttcgaactccgtcccgtgcatatattatgca 223  Q
    |||||| | ||||||||||| ||||| ||| ||||||||  |||| ||| |||||||| ||| ||| |||||||| ||||||    
T  47098844 tagtggctagagctcacacaatttaattgtggagaagtggagtgtctggggttcgaaccccggcccctgcatataatatgca 47098763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 142 - 223
Target Start/End: Original strand, 53432695 - 53432776
Alignment:
Q  142 tagtggttggagctcacacattttaaatgtagagaagtgaggtgtttggagttcgaactccgtcccgtgcatatattatgca 223  Q
    |||||| | ||||||||||| ||||| ||| |||||||| |||||  || |||||||| ||| ||| |||||||| ||||||    
T  53432695 tagtggctagagctcacacaatttaattgtggagaagtggggtgtccggggttcgaaccccggcccctgcatataatatgca 53432776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 142 - 202
Target Start/End: Original strand, 8171674 - 8171734
Alignment:
Q  142 tagtggttggagctcacacattttaaatgtagagaagtgaggtgtttggagttcgaactcc 202  Q
    |||||| | ||||| ||||||||||| |||||| ||||| ||||||| | |||||||||||    
T  8171674 tagtggctagagcttacacattttaattgtagaaaagtggggtgtttagggttcgaactcc 8171734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 151 - 223
Target Start/End: Complemental strand, 26942856 - 26942784
Alignment:
Q  151 gagctcacacattttaaatgtagagaagtgaggtgtttggagttcgaactccgtcccgtgcatatattatgca 223  Q
    ||||||||||| ||||| |||||||||||| ||||| ||  |||||||| | | ||| |||||||| ||||||    
T  26942856 gagctcacacaatttaattgtagagaagtggggtgtctgcggttcgaaccctggcccctgcatataatatgca 26942784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 135 - 223
Target Start/End: Original strand, 31327669 - 31327757
Alignment:
Q  135 aataacatagtggttggagctcacacattttaaatgtagagaagtgaggtgtttggagttcgaactccgtcccgtgcatatattatgca 223  Q
    ||||||||||||| | ||||||||||| ||||| ||| ||||||||  ||||  || |||||||| ||| | | |||||||| ||||||    
T  31327669 aataacatagtggctagagctcacacaatttaattgtggagaagtggagtgtccggggttcgaaccccggctcctgcatataatatgca 31327757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 151 - 223
Target Start/End: Complemental strand, 31587050 - 31586978
Alignment:
Q  151 gagctcacacattttaaatgtagagaagtgaggtgtttggagttcgaactccgtcccgtgcatatattatgca 223  Q
    ||||||||||| ||||| ||| |||||||| |||||  ||  ||||||||||| ||| |||||||| ||||||    
T  31587050 gagctcacacaatttaattgtggagaagtggggtgtccgggattcgaactccgacccctgcatataatatgca 31586978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 142 - 182
Target Start/End: Original strand, 36478146 - 36478186
Alignment:
Q  142 tagtggttggagctcacacattttaaatgtagagaagtgag 182  Q
    |||||| ||||||||||||||||| ||||| ||||||||||    
T  36478146 tagtggctggagctcacacatttttaatgtggagaagtgag 36478186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 142 - 186
Target Start/End: Original strand, 40723618 - 40723662
Alignment:
Q  142 tagtggttggagctcacacattttaaatgtagagaagtgaggtgt 186  Q
    ||||| || ||| ||||||||||||||||| ||||||||||||||    
T  40723618 tagtgattagagttcacacattttaaatgtggagaagtgaggtgt 40723662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 144 - 200
Target Start/End: Original strand, 51143497 - 51143552
Alignment:
Q  144 gtggttggagctcacacattttaaatgtagagaagtgaggtgtttggagttcgaact 200  Q
    ||||||| ||||||||||||||||| || || |||||||||||  ||||||||||||    
T  51143497 gtggttgaagctcacacattttaaacgt-gaaaagtgaggtgtccggagttcgaact 51143552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 30)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 149 - 223
Target Start/End: Complemental strand, 13105196 - 13105122
Alignment:
Q  149 tggagctcacacattttaaatgtagagaagtgaggtgtttggagttcgaactccgtcccgtgcatatattatgca 223  Q
    ||||||||||||||||||||||| |||||||| ||||| ||  |||||||| ||| ||| |||||||||||||||    
T  13105196 tggagctcacacattttaaatgtggagaagtggggtgtctgaggttcgaaccccggcccttgcatatattatgca 13105122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 142 - 223
Target Start/End: Original strand, 5328525 - 5328606
Alignment:
Q  142 tagtggttggagctcacacattttaaatgtagagaagtgaggtgtttggagttcgaactccgtcccgtgcatatattatgca 223  Q
    |||||| | ||||||||||||||||| ||| ||||||||||||||  || |||||||| ||| ||| |||||||| ||||||    
T  5328525 tagtggctagagctcacacattttaattgtggagaagtgaggtgtccggggttcgaaccccggcccctgcatataatatgca 5328606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 131 - 216
Target Start/End: Complemental strand, 33810763 - 33810678
Alignment:
Q  131 gtcaaataacatagtggttggagctcacacattttaaatgtagagaagtgaggtgtttggagttcgaactccgtcccgtgcatata 216  Q
    |||||||| | |||||| ||||||||||||||||||||||| |||||||| |||||  || ||| |||| ||| ||| ||||||||    
T  33810763 gtcaaatagcttagtggctggagctcacacattttaaatgtggagaagtggggtgtccggggtttgaaccccggcccctgcatata 33810678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 142 - 186
Target Start/End: Complemental strand, 26217903 - 26217859
Alignment:
Q  142 tagtggttggagctcacacattttaaatgtagagaagtgaggtgt 186  Q
    |||||||||||| ||||||||||||||||| ||||||||||||||    
T  26217903 tagtggttggagatcacacattttaaatgtggagaagtgaggtgt 26217859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 142 - 216
Target Start/End: Complemental strand, 34873198 - 34873124
Alignment:
Q  142 tagtggttggagctcacacattttaaatgtagagaagtgaggtgtttggagttcgaactccgtcccgtgcatata 216  Q
    |||||| ||||||||||||||||||||||| |||||||| |||||  |  |||||||| ||| ||| ||||||||    
T  34873198 tagtggctggagctcacacattttaaatgtggagaagtggggtgtccgaggttcgaaccccgacccctgcatata 34873124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 142 - 216
Target Start/End: Original strand, 36035137 - 36035211
Alignment:
Q  142 tagtggttggagctcacacattttaaatgtagagaagtgaggtgtttggagttcgaactccgtcccgtgcatata 216  Q
    |||||| ||||||||||||||||||||||| |||||||| |||||  |  |||||||| ||| ||| ||||||||    
T  36035137 tagtggctggagctcacacattttaaatgtggagaagtggggtgtccgaggttcgaaccccgacccctgcatata 36035211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 142 - 216
Target Start/End: Complemental strand, 37708803 - 37708729
Alignment:
Q  142 tagtggttggagctcacacattttaaatgtagagaagtgaggtgtttggagttcgaactccgtcccgtgcatata 216  Q
    |||||| ||||||||||||||||||||||| |||||||| | |||  || |||||||| ||| ||| ||||||||    
T  37708803 tagtggctggagctcacacattttaaatgtggagaagtgggatgtccggggttcgaaccccggcccctgcatata 37708729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 142 - 223
Target Start/End: Original strand, 13059135 - 13059216
Alignment:
Q  142 tagtggttggagctcacacattttaaatgtagagaagtgaggtgtttggagttcgaactccgtcccgtgcatatattatgca 223  Q
    |||||| |||||| |||||||||||||||| |||||||| |||||  || |||||||| ||  ||| |||||| ||||||||    
T  13059135 tagtggctggagcacacacattttaaatgtggagaagtggggtgtcaggggttcgaacccctgcccctgcataaattatgca 13059216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 142 - 223
Target Start/End: Complemental strand, 14583309 - 14583228
Alignment:
Q  142 tagtggttggagctcacacattttaaatgtagagaagtgaggtgtttggagttcgaactccgtcccgtgcatatattatgca 223  Q
    |||||| |||||||||||||| || ||||| |||||||| |||||| |  |||||||| ||  ||| |||||||||||||||    
T  14583309 tagtggctggagctcacacatatttaatgtggagaagtggggtgttcgtggttcgaaccccagcccctgcatatattatgca 14583228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 142 - 223
Target Start/End: Original strand, 17072521 - 17072602
Alignment:
Q  142 tagtggttggagctcacacattttaaatgtagagaagtgaggtgtttggagttcgaactccgtcccgtgcatatattatgca 223  Q
    |||||| | ||||||||||| ||||| ||| |||||||| |||||| || |||||||| ||| ||| |||||||| ||||||    
T  17072521 tagtggctagagctcacacaatttaattgtggagaagtggggtgttcggggttcgaaccccggcccctgcatataatatgca 17072602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 142 - 223
Target Start/End: Complemental strand, 17575750 - 17575669
Alignment:
Q  142 tagtggttggagctcacacattttaaatgtagagaagtgaggtgtttggagttcgaactccgtcccgtgcatatattatgca 223  Q
    |||||| | ||||||||||| ||||| ||| |||||||| |||||| || |||||||| ||| ||| |||||||| ||||||    
T  17575750 tagtggctagagctcacacaatttaattgtggagaagtggggtgttcggggttcgaaccccggcccctgcatataatatgca 17575669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 142 - 203
Target Start/End: Original strand, 21303429 - 21303490
Alignment:
Q  142 tagtggttggagctcacacattttaaatgtagagaagtgaggtgtttggagttcgaactccg 203  Q
    |||||||| ||||||| |||||||| |||| |||||||||||||| ||  ||||||||||||    
T  21303429 tagtggttagagctcaaacattttatatgtggagaagtgaggtgtctgtggttcgaactccg 21303490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 142 - 199
Target Start/End: Complemental strand, 31024406 - 31024349
Alignment:
Q  142 tagtggttggagctcacacattttaaatgtagagaagtgaggtgtttggagttcgaac 199  Q
    |||||| ||||||||||||||||||||||| |||||||| |||||  || ||||||||    
T  31024406 tagtggctggagctcacacattttaaatgtggagaagtggggtgtccggggttcgaac 31024349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 142 - 203
Target Start/End: Complemental strand, 41086726 - 41086665
Alignment:
Q  142 tagtggttggagctcacacattttaaatgtagagaagtgaggtgtttggagttcgaactccg 203  Q
    |||||||  ||||||||||| ||||| ||| |||||||| |||||| |||||||||||||||    
T  41086726 tagtggtcagagctcacacaatttaattgtggagaagtggggtgttcggagttcgaactccg 41086665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 142 - 199
Target Start/End: Original strand, 44053398 - 44053455
Alignment:
Q  142 tagtggttggagctcacacattttaaatgtagagaagtgaggtgtttggagttcgaac 199  Q
    |||||| ||||||||||||||||||||||| |||||||| |||||  || ||||||||    
T  44053398 tagtggctggagctcacacattttaaatgtggagaagtggggtgtccggggttcgaac 44053455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 143 - 223
Target Start/End: Complemental strand, 30300440 - 30300360
Alignment:
Q  143 agtggttggagctcacacattttaaatgtagagaagtgaggtgtttggagttcgaactccgtcccgtgcatatattatgca 223  Q
    |||| |||||||||||||||||||||| | |||||||  ||| |  || |||||||| ||| ||| |||||||||||||||    
T  30300440 agtgtttggagctcacacattttaaatatggagaagtagggtttccggggttcgaaccccggcccctgcatatattatgca 30300360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 149 - 216
Target Start/End: Complemental strand, 8183425 - 8183358
Alignment:
Q  149 tggagctcacacattttaaatgtagagaagtgaggtgtttggagttcgaactccgtcccgtgcatata 216  Q
    ||||||||||||||||||||| | |||||||| | ||| ||| |||||||| ||| ||| ||||||||    
T  8183425 tggagctcacacattttaaatatggagaagtgggttgtctggggttcgaaccccggcccctgcatata 8183358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 142 - 216
Target Start/End: Original strand, 9812999 - 9813073
Alignment:
Q  142 tagtggttggagctcacacattttaaatgtagagaagtgaggtgtttggagttcgaactccgtcccgtgcatata 216  Q
    |||||||| || |||| ||||||||||||| |||||||||||||| ||   ||||||||||| ||  ||||||||    
T  9812999 tagtggttagaactcatacattttaaatgtggagaagtgaggtgtctgagattcgaactccgacctctgcatata 9813073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 152 - 198
Target Start/End: Complemental strand, 36274475 - 36274430
Alignment:
Q  152 agctcacacattttaaatgtagagaagtgaggtgtttggagttcgaa 198  Q
    ||||||||||||| |||| |||||||||||||||| |||||||||||    
T  36274475 agctcacacattt-aaatatagagaagtgaggtgtatggagttcgaa 36274430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 146 - 216
Target Start/End: Original strand, 38730517 - 38730587
Alignment:
Q  146 ggttggagctcacacattttaaatgtagagaagtgaggtgtttggagttcgaactccgtcccgtgcatata 216  Q
    |||||||||||||| ||||||||||| |||||||| ||||| ||| |||  |||||||  || ||||||||    
T  38730517 ggttggagctcacatattttaaatgtggagaagtggggtgtctggggtttaaactccgatccctgcatata 38730587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 142 - 223
Target Start/End: Original strand, 94469 - 94550
Alignment:
Q  142 tagtggttggagctcacacattttaaatgtagagaagtgaggtgtttggagttcgaactccgtcccgtgcatatattatgca 223  Q
    |||||||| ||||||||||| ||||| ||| ||||||||  ||||  || |||||||||||| | | |||||||| ||||||    
T  94469 tagtggttagagctcacacaatttaattgtggagaagtggagtgtccggggttcgaactccggctcctgcatataatatgca 94550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 142 - 223
Target Start/End: Complemental strand, 2792891 - 2792810
Alignment:
Q  142 tagtggttggagctcacacattttaaatgtagagaagtgaggtgtttggagttcgaactccgtcccgtgcatatattatgca 223  Q
    |||||||||||||||||||| || || ||| ||||||||  ||||  || |||||||| ||| ||| |||||||| ||||||    
T  2792891 tagtggttggagctcacacaattaaattgtggagaagtggagtgtccggggttcgaaccccggcccctgcatataatatgca 2792810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 142 - 203
Target Start/End: Complemental strand, 10761931 - 10761870
Alignment:
Q  142 tagtggttggagctcacacattttaaatgtagagaagtgaggtgtttggagttcgaactccg 203  Q
    |||||| | ||||||||||| ||||| ||| |||||||||||||| | | ||||||||||||    
T  10761931 tagtggctagagctcacacaatttaattgtggagaagtgaggtgtctagggttcgaactccg 10761870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 141 - 182
Target Start/End: Original strand, 14181299 - 14181340
Alignment:
Q  141 atagtggttggagctcacacattttaaatgtagagaagtgag 182  Q
    ||||||||||||||||| ||||||||||||  ||||||||||    
T  14181299 atagtggttggagctcatacattttaaatgcggagaagtgag 14181340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 142 - 199
Target Start/End: Original strand, 21548455 - 21548512
Alignment:
Q  142 tagtggttggagctcacacattttaaatgtagagaagtgaggtgtttggagttcgaac 199  Q
    |||||| | ||||||||||||||||| ||| |||||||| |||||| || ||||||||    
T  21548455 tagtggctagagctcacacattttaattgtggagaagtggggtgttcggggttcgaac 21548512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 142 - 223
Target Start/End: Complemental strand, 34894481 - 34894400
Alignment:
Q  142 tagtggttggagctcacacattttaaatgtagagaagtgaggtgtttggagttcgaactccgtcccgtgcatatattatgca 223  Q
    |||||| | ||||||||||| ||||| ||| |||||||| |||||  || |||||||| ||| ||| |||||||| ||||||    
T  34894481 tagtggctagagctcacacaatttaactgtggagaagtggggtgtccggggttcgaaccccggcccctgcatataatatgca 34894400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 142 - 223
Target Start/End: Complemental strand, 37291034 - 37290953
Alignment:
Q  142 tagtggttggagctcacacattttaaatgtagagaagtgaggtgtttggagttcgaactccgtcccgtgcatatattatgca 223  Q
    |||||| | ||||||||||| ||||| ||| |||||||| |||||  || |||||||| ||| ||| |||||||| ||||||    
T  37291034 tagtggctagagctcacacaatttaattgtggagaagtggggtgtccggggttcgaacgccggcccctgcatataatatgca 37290953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 142 - 186
Target Start/End: Original strand, 11406637 - 11406681
Alignment:
Q  142 tagtggttggagctcacacattttaaatgtagagaagtgaggtgt 186  Q
    ||||||||  || ||||||||||||||||| ||||||||||||||    
T  11406637 tagtggttaaagttcacacattttaaatgtggagaagtgaggtgt 11406681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 155 - 223
Target Start/End: Original strand, 12510406 - 12510474
Alignment:
Q  155 tcacacattttaaatgtagagaagtgaggtgtttggagttcgaactccgtcccgtgcatatattatgca 223  Q
    |||||||||||||| |||| ||| |||| ||| ||  |||||||||||| ||| | |||||||||||||    
T  12510406 tcacacattttaaacgtagggaaatgagatgtctgaggttcgaactccgacccatacatatattatgca 12510474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 142 - 186
Target Start/End: Complemental strand, 40904643 - 40904599
Alignment:
Q  142 tagtggttggagctcacacattttaaatgtagagaagtgaggtgt 186  Q
    |||||| || ||||| |||||||||||||| ||||||||||||||    
T  40904643 tagtggctgaagctcgcacattttaaatgtggagaagtgaggtgt 40904599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 28)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 142 - 221
Target Start/End: Complemental strand, 11692502 - 11692421
Alignment:
Q  142 tagtggttggagctcacacattttaaatgtagagaagtgag--gtgtttggagttcgaactccgtcccgtgcatatattatg 221  Q
    |||||||  |||||| ||||||||||||||||||||||| |  |||||||| |||||||||||| ||| |||||||||||||    
T  11692502 tagtggtcagagctcgcacattttaaatgtagagaagtggggtgtgtttggggttcgaactccggcccttgcatatattatg 11692421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 140 - 223
Target Start/End: Complemental strand, 10690961 - 10690878
Alignment:
Q  140 catagtggttggagctcacacattttaaatgtagagaagtgaggtgtttggagttcgaactccgtcccgtgcatatattatgca 223  Q
    |||||||| | | ||||||||| ||||| ||| |||||||| ||||||||| |||||||||||| ||| |||||||| ||||||    
T  10690961 catagtggctagtgctcacacaatttaattgtggagaagtggggtgtttggggttcgaactccgacccctgcatataatatgca 10690878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 142 - 216
Target Start/End: Complemental strand, 46758354 - 46758280
Alignment:
Q  142 tagtggttggagctcacacattttaaatgtagagaagtgaggtgtttggagttcgaactccgtcccgtgcatata 216  Q
    |||||| ||||||||||||||||||||||| ||| |||| |||||  ||||||||||| ||| ||| ||||||||    
T  46758354 tagtggctggagctcacacattttaaatgtggaggagtggggtgtccggagttcgaaccccgacccctgcatata 46758280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 142 - 223
Target Start/End: Original strand, 1563697 - 1563778
Alignment:
Q  142 tagtggttggagctcacacattttaaatgtagagaagtgaggtgtttggagttcgaactccgtcccgtgcatatattatgca 223  Q
    |||||||| ||||||||||| ||||| |||||||||||| |||||  || |||||||| ||| ||| |||||||| ||||||    
T  1563697 tagtggttagagctcacacaatttaattgtagagaagtggggtgtccggggttcgaaccccggcccctgcatataatatgca 1563778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 142 - 223
Target Start/End: Complemental strand, 3532690 - 3532609
Alignment:
Q  142 tagtggttggagctcacacattttaaatgtagagaagtgaggtgtttggagttcgaactccgtcccgtgcatatattatgca 223  Q
    |||||| | ||||||||||| ||||| ||||||||||||  |||||||| ||||||||  || ||| |||||||||||||||    
T  3532690 tagtggctagagctcacacaatttaattgtagagaagtggagtgtttggggttcgaacctcggcccctgcatatattatgca 3532609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 141 - 221
Target Start/End: Original strand, 42435177 - 42435257
Alignment:
Q  141 atagtggttggagctcacacattttaaatgtagagaagtgaggtgtttggagttcgaactccgtcccgtgcatatattatg 221  Q
    ||||||||||||  ||| ||||||||||||| |||||||||||| | ||| |||||||| ||| ||| |||||| ||||||    
T  42435177 atagtggttggaagtcagacattttaaatgtggagaagtgaggtatctggggttcgaaccccggcccctgcataaattatg 42435257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 151 - 199
Target Start/End: Original strand, 43404941 - 43404989
Alignment:
Q  151 gagctcacacattttaaatgtagagaagtgaggtgtttggagttcgaac 199  Q
    ||||||||||||||||||||| |||||||||| ||||||| ||||||||    
T  43404941 gagctcacacattttaaatgtggagaagtgagatgtttggggttcgaac 43404989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 149 - 220
Target Start/End: Original strand, 10363385 - 10363455
Alignment:
Q  149 tggagctcacacattttaaatgtagagaagtgaggtgtttggagttcgaactccgtcccgtgcatatattat 220  Q
    |||||||||||||||| |||||| |||||||||||||||  || ||||||||||| ||| |||||| |||||    
T  10363385 tggagctcacacattt-aaatgtggagaagtgaggtgttcagacttcgaactccgacccctgcataaattat 10363455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 149 - 216
Target Start/End: Original strand, 27162260 - 27162327
Alignment:
Q  149 tggagctcacacattttaaatgtagagaagtgaggtgtttggagttcgaactccgtcccgtgcatata 216  Q
    |||||||||||||||||||||||  ||||||| |||| | || |||||||||||| ||| ||||||||    
T  27162260 tggagctcacacattttaaatgtgcagaagtgtggtggtcggggttcgaactccgacccctgcatata 27162327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 142 - 223
Target Start/End: Original strand, 28799978 - 28800060
Alignment:
Q  142 tagtggttggagctcacaca-ttttaaatgtagagaagtgaggtgtttggagttcgaactccgtcccgtgcatatattatgca 223  Q
    |||||||||||||||||||| ||||||||||||||||||| |||||  || |||| ||| ||  ||| |||||| ||||||||    
T  28799978 tagtggttggagctcacacatttttaaatgtagagaagtggggtgtcaggggttcaaacccctgcccctgcataaattatgca 28800060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 142 - 223
Target Start/End: Complemental strand, 37710197 - 37710116
Alignment:
Q  142 tagtggttggagctcacacattttaaatgtagagaagtgaggtgtttggagttcgaactcc-gtcccgtgcatatattatgca 223  Q
    |||| ||||||||||||||||||||||||| |||||||||| |||| |   |||||||||| ||||| | |||||||||||||    
T  37710197 tagttgttggagctcacacattttaaatgtggagaagtgagatgttcgtgattcgaactccagtccc-tacatatattatgca 37710116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 142 - 199
Target Start/End: Original strand, 18503438 - 18503495
Alignment:
Q  142 tagtggttggagctcacacattttaaatgtagagaagtgaggtgtttggagttcgaac 199  Q
    ||||||||  |||||||||||||||||||| |||||||| ||||| ||| ||||||||    
T  18503438 tagtggttaaagctcacacattttaaatgtggagaagtggggtgtctggggttcgaac 18503495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 142 - 199
Target Start/End: Original strand, 20421717 - 20421774
Alignment:
Q  142 tagtggttggagctcacacattttaaatgtagagaagtgaggtgtttggagttcgaac 199  Q
    |||||||| ||||||||||||||||||||| |||||||||| ||| | | ||||||||    
T  20421717 tagtggttcgagctcacacattttaaatgtggagaagtgagatgtctagggttcgaac 20421774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 131 - 223
Target Start/End: Original strand, 29461762 - 29461854
Alignment:
Q  131 gtcaaataacatagtggttggagctcacacattttaaatgtagagaagtgaggtgtttggagttcgaa-ctccgtcccgtgcatatattatgca 223  Q
    |||||||||| |||||| ||||||| ||||||||||||| |||| ||||| |||||   | ||||||| ||||| ||| |||||||||||||||    
T  29461762 gtcaaataacctagtggatggagcttacacattttaaatatagaaaagtggggtgtccag-gttcgaacctccgacccctgcatatattatgca 29461854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 131 - 216
Target Start/End: Complemental strand, 32047212 - 32047127
Alignment:
Q  131 gtcaaataacatagtggttggagctcacacattttaaatgtagagaagtgaggtgtttggagttcgaactccgtcccgtgcatata 216  Q
    |||||||| | |||||| | ||||||||||| ||||| ||| ||||||||||||||  || |||||||| ||| ||| ||||||||    
T  32047212 gtcaaatagcctagtggctagagctcacacaatttaattgtggagaagtgaggtgtccggggttcgaaccccggcccctgcatata 32047127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 142 - 223
Target Start/End: Original strand, 47440768 - 47440849
Alignment:
Q  142 tagtggttggagctcacacattttaaatgtagagaagtgaggtgtttggagttcgaactccgtcccgtgcatatattatgca 223  Q
    |||||| |||||||||||||| || ||||| |||||||| |||||   | |||||||| ||| ||| |||||||||||||||    
T  47440768 tagtggctggagctcacacatatttaatgtggagaagtggggtgtccagggttcgaaccccgacccctgcatatattatgca 47440849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 152 - 199
Target Start/End: Original strand, 42798285 - 42798332
Alignment:
Q  152 agctcacacattttaaatgtagagaagtgaggtgtttggagttcgaac 199  Q
    |||||||||||||||||||| |||||||  |||||| |||||||||||    
T  42798285 agctcacacattttaaatgtggagaagtcgggtgttcggagttcgaac 42798332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 149 - 216
Target Start/End: Complemental strand, 46645814 - 46645747
Alignment:
Q  149 tggagctcacacattttaaatgtagagaagtgaggtgtttggagttcgaactccgtcccgtgcatata 216  Q
    ||||||||||||||||||||||| ||| |||| |||||  || |||||||| ||| ||| ||||||||    
T  46645814 tggagctcacacattttaaatgtggaggagtggggtgtccggggttcgaaccccggcccctgcatata 46645747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 149 - 199
Target Start/End: Complemental strand, 10901750 - 10901700
Alignment:
Q  149 tggagctcacacattttaaatgtagagaagtgaggtgtttggagttcgaac 199  Q
    ||||||||||||||| ||||||| |||||||| |||||| || ||||||||    
T  10901750 tggagctcacacattataaatgtggagaagtggggtgttaggggttcgaac 10901700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 142 - 216
Target Start/End: Complemental strand, 13702137 - 13702063
Alignment:
Q  142 tagtggttggagctcacacattttaaatgtagagaagtgaggtgtttggagttcgaactccgtcccgtgcatata 216  Q
    |||||| ||||||||||||||||||||||| ||| |||| |||||  || ||| |||| ||| ||| ||||||||    
T  13702137 tagtggctggagctcacacattttaaatgtggaggagtggggtgtccggggtttgaaccccggcccctgcatata 13702063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 144 - 190
Target Start/End: Complemental strand, 35005511 - 35005465
Alignment:
Q  144 gtggttggagctcacacattttaaatgtagagaagtgaggtgtttgg 190  Q
    ||||||| |||||||||||||||||  ||||||||||| ||||||||    
T  35005511 gtggttgaagctcacacattttaaacatagagaagtgaagtgtttgg 35005465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 145 - 223
Target Start/End: Original strand, 36114303 - 36114380
Alignment:
Q  145 tggttggagctcacacattttaaatgtagagaagtgaggtgtttggagttcgaactccgtcccgtgcatatattatgca 223  Q
    ||||| ||||||||||| ||||||||| |||||||||| | ||||| |||||||| ||| ||  |||||||| ||||||    
T  36114303 tggttagagctcacaca-tttaaatgtggagaagtgagatatttggggttcgaaccccgaccgctgcatataatatgca 36114380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 151 - 223
Target Start/End: Complemental strand, 12428294 - 12428221
Alignment:
Q  151 gagctcacacattttaaatgtagagaagtgaggtgttt-ggagttcgaactccgtcccgtgcatatattatgca 223  Q
    ||||||| ||||||||||||| |||||||  ||||||| ||||||||||| ||  ||| |||||||| ||||||    
T  12428294 gagctcatacattttaaatgtggagaagttgggtgtttgggagttcgaaccccaacccctgcatataatatgca 12428221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 151 - 184
Target Start/End: Original strand, 21402795 - 21402828
Alignment:
Q  151 gagctcacacattttaaatgtagagaagtgaggt 184  Q
    ||||||||||||||||||||| ||||||||||||    
T  21402795 gagctcacacattttaaatgtggagaagtgaggt 21402828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 142 - 223
Target Start/End: Original strand, 30388465 - 30388546
Alignment:
Q  142 tagtggttggagctcacacattttaaatgtagagaagtgaggtgtttggagttcgaactccgtcccgtgcatatattatgca 223  Q
    |||||| | ||||||||||| ||||| ||| ||||||||  |||| ||| |||||||| ||| ||| |||||||| ||||||    
T  30388465 tagtggctagagctcacacaatttaattgtggagaagtggagtgtctggggttcgaaccccggcccctgcatataatatgca 30388546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 142 - 171
Target Start/End: Complemental strand, 38697297 - 38697268
Alignment:
Q  142 tagtggttggagctcacacattttaaatgt 171  Q
    ||||||||||||||||||||||||||||||    
T  38697297 tagtggttggagctcacacattttaaatgt 38697268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 139 - 172
Target Start/End: Complemental strand, 40436425 - 40436392
Alignment:
Q  139 acatagtggttggagctcacacattttaaatgta 172  Q
    ||||||||| ||||||||||||||||||||||||    
T  40436425 acatagtggctggagctcacacattttaaatgta 40436392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 142 - 178
Target Start/End: Original strand, 4232561 - 4232597
Alignment:
Q  142 tagtggttggagctcacacattttaaatgtagagaag 178  Q
    |||||||||||||||| ||||||||||||| ||||||    
T  4232561 tagtggttggagctcatacattttaaatgtggagaag 4232597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 36)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 149 - 223
Target Start/End: Original strand, 50376615 - 50376688
Alignment:
Q  149 tggagctcacacattttaaatgtagagaagtgaggtgtttggagttcgaactccgtcccgtgcatatattatgca 223  Q
    ||||||||||||||||||||||| || |||||| |||||||| |||||||| || |||| |||||||||||||||    
T  50376615 tggagctcacacattttaaatgtgga-aagtgaagtgtttggggttcgaaccccttcccctgcatatattatgca 50376688  T

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Target: chr4; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 142 - 216
Target Start/End: Complemental strand, 30305911 - 30305837
Alignment:
Q  142 tagtggttggagctcacacattttaaatgtagagaagtgaggtgtttggagttcgaactccgtcccgtgcatata 216  Q
    |||||| ||||||||||||||||||||||| ||||||||||||||  || |||||||| ||  ||| ||||||||    
T  30305911 tagtggctggagctcacacattttaaatgtggagaagtgaggtgtccggggttcgaaccccagcccctgcatata 30305837  T

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Target: chr4; HSP #3
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 142 - 216
Target Start/End: Original strand, 36099141 - 36099215
Alignment:
Q  142 tagtggttggagctcacacattttaaatgtagagaagtgaggtgtttggagttcgaactccgtcccgtgcatata 216  Q
    |||||| ||||||||||||||||||||||| |||||||| |||||  || |||||||| ||| ||| ||||||||    
T  36099141 tagtggctggagctcacacattttaaatgtggagaagtggggtgtccggggttcgaaccccggcccctgcatata 36099215  T

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Target: chr4; HSP #4
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 142 - 223
Target Start/End: Complemental strand, 624592 - 624511
Alignment:
Q  142 tagtggttggagctcacacattttaaatgtagagaagtgaggtgtttggagttcgaactccgtcccgtgcatatattatgca 223  Q
    |||||||| ||||||||||||||||||||| |||||||| |||||  || |||||||| ||  ||| |||||| ||||||||    
T  624592 tagtggttagagctcacacattttaaatgtggagaagtggggtgtcaggggttcgaacccctgcccctgcataaattatgca 624511  T

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Target: chr4; HSP #5
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 142 - 223
Target Start/End: Complemental strand, 8965206 - 8965125
Alignment:
Q  142 tagtggttggagctcacacattttaaatgtagagaagtgaggtgtttggagttcgaactccgtcccgtgcatatattatgca 223  Q
    |||||||| ||||||||||| ||||| |||||||||||| |||||  || |||||||| ||| ||| |||||||| ||||||    
T  8965206 tagtggttagagctcacacaatttaattgtagagaagtggggtgtccggggttcgaaccccggcccctgcatataatatgca 8965125  T

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Target: chr4; HSP #6
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 142 - 223
Target Start/End: Complemental strand, 10402553 - 10402472
Alignment:
Q  142 tagtggttggagctcacacattttaaatgtagagaagtgaggtgtttggagttcgaactccgtcccgtgcatatattatgca 223  Q
    |||||| | ||||||||||| ||||| ||| ||||||||||||||  || |||||||||||| ||| |||||||| ||||||    
T  10402553 tagtggctagagctcacacaatttaattgtggagaagtgaggtgtccggggttcgaactccgacccctgcatataatatgca 10402472  T

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Target: chr4; HSP #7
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 151 - 223
Target Start/End: Original strand, 11375856 - 11375928
Alignment:
Q  151 gagctcacacattttaaatgtagagaagtgaggtgtttggagttcgaactccgtcccgtgcatatattatgca 223  Q
    ||||||||||||||||| ||| ||||||||||||||  || |||||||| ||| ||| |||||||| ||||||    
T  11375856 gagctcacacattttaattgtggagaagtgaggtgtccggggttcgaaccccggcccctgcatataatatgca 11375928  T

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Target: chr4; HSP #8
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 152 - 229
Target Start/End: Original strand, 5440517 - 5440594
Alignment:
Q  152 agctcacacattttaaatgtagagaagtgaggtgtttggagttcgaactccgtcccgtgcatatattatgcacgtccc 229  Q
    ||||||||||| ||||||||||| | ||| ||||||||| ||||||||  | |||| |||||||||||| || |||||    
T  5440517 agctcacacatgttaaatgtagaaatgtggggtgtttggggttcgaacctcatcccctgcatatattattcatgtccc 5440594  T

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Target: chr4; HSP #9
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 142 - 223
Target Start/End: Complemental strand, 29406468 - 29406388
Alignment:
Q  142 tagtggttggagctcacacattttaaatgtagagaagtgaggtgtttggagttcgaactccgtcccgtgcatatattatgca 223  Q
    |||||||||||||||||||| || |||||| |||||||| | |||  ||||||||||| ||| ||| |||||| ||||||||    
T  29406468 tagtggttggagctcacacaatt-aaatgtggagaagtgggttgtccggagttcgaaccccgacccctgcataaattatgca 29406388  T

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Target: chr4; HSP #10
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 142 - 223
Target Start/End: Original strand, 37868525 - 37868606
Alignment:
Q  142 tagtggttggagctcacacattttaaatgtagagaagtgaggtgtttggagttcgaactccgtcccgtgcatatattatgca 223  Q
    |||||||| ||||||||||| ||||| ||| ||||||||||||||  |  |||||||||||  ||| |||||||| ||||||    
T  37868525 tagtggttagagctcacacaatttaattgtggagaagtgaggtgtccgaggttcgaactccagcccctgcatataatatgca 37868606  T

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Target: chr4; HSP #11
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 142 - 223
Target Start/End: Complemental strand, 47890807 - 47890726
Alignment:
Q  142 tagtggttggagctcacacattttaaatgtagagaagtgaggtgtttggagttcgaactccgtcccgtgcatatattatgca 223  Q
    |||||||| ||||||||||| ||||| ||| ||||||||  |||| ||| |||||||| ||| ||| |||||||| ||||||    
T  47890807 tagtggttagagctcacacaatttaattgtggagaagtggagtgtctggggttcgaaccccgacccctgcatataatatgca 47890726  T

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Target: chr4; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 151 - 199
Target Start/End: Complemental strand, 7043987 - 7043939
Alignment:
Q  151 gagctcacacattttaaatgtagagaagtgaggtgtttggagttcgaac 199  Q
    ||||||| ||||||||||||| ||||||||||| || ||||||||||||    
T  7043987 gagctcatacattttaaatgtggagaagtgaggagtctggagttcgaac 7043939  T

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Target: chr4; HSP #13
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 142 - 185
Target Start/End: Original strand, 4513398 - 4513441
Alignment:
Q  142 tagtggttggagctcacacattttaaatgtagagaagtgaggtg 185  Q
    |||||||  ||||||||||||||||||||| |||||||||||||    
T  4513398 tagtggtcagagctcacacattttaaatgtggagaagtgaggtg 4513441  T

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Target: chr4; HSP #14
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 142 - 181
Target Start/End: Original strand, 16589372 - 16589411
Alignment:
Q  142 tagtggttggagctcacacattttaaatgtagagaagtga 181  Q
    ||||||||||||||||||||||||||||||| | ||||||    
T  16589372 tagtggttggagctcacacattttaaatgtaaataagtga 16589411  T

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Target: chr4; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 142 - 221
Target Start/End: Original strand, 23778783 - 23778862
Alignment:
Q  142 tagtggttggagctcacacattttaaatgtagagaagtgaggtgtttggagttcgaactccgtcccgtgcatatattatg 221  Q
    |||||||| ||||||||||| ||||| ||| |||||||| ||||| ||| |||||||| ||  ||| |||||||| ||||    
T  23778783 tagtggttagagctcacacaatttaattgtggagaagtggggtgtctggggttcgaaccccaacccctgcatataatatg 23778862  T

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Target: chr4; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 158 - 189
Target Start/End: Complemental strand, 39489882 - 39489851
Alignment:
Q  158 cacattttaaatgtagagaagtgaggtgtttg 189  Q
    ||||||||||||||||||||||||||||||||    
T  39489882 cacattttaaatgtagagaagtgaggtgtttg 39489851  T

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Target: chr4; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 132 - 182
Target Start/End: Original strand, 2860680 - 2860730
Alignment:
Q  132 tcaaataacatagtggttggagctcacacattttaaatgtagagaagtgag 182  Q
    |||||||||||||||  | ||||||||||||||||||| | ||||||||||    
T  2860680 tcaaataacatagtgacttgagctcacacattttaaatatggagaagtgag 2860730  T

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Target: chr4; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 142 - 216
Target Start/End: Original strand, 23176680 - 23176753
Alignment:
Q  142 tagtggttggagctcacacattttaaatgtagagaagtgaggtgtttggagttcgaactccgtcccgtgcatata 216  Q
    |||||| ||||||||||||||||||||||| ||||| || |||||  || |||||||| ||| ||| ||||||||    
T  23176680 tagtggctggagctcacacattttaaatgtggagaa-tggggtgtccggggttcgaaccccgacccctgcatata 23176753  T

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Target: chr4; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 142 - 216
Target Start/End: Complemental strand, 28715802 - 28715728
Alignment:
Q  142 tagtggttggagctcacacattttaaatgtagagaagtgaggtgtttggagttcgaactccgtcccgtgcatata 216  Q
    |||||| || |||||||||||||||||||| ||||||||  ||||  || |||||||| ||| ||| ||||||||    
T  28715802 tagtggctgaagctcacacattttaaatgtggagaagtggagtgtccggggttcgaaccccggcccctgcatata 28715728  T

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Target: chr4; HSP #20
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 142 - 199
Target Start/End: Complemental strand, 2870995 - 2870939
Alignment:
Q  142 tagtggttggagctcacacattttaaatgtagagaagtgaggtgtttggagttcgaac 199  Q
    ||||||||| ||||||||||| |||||| | ||||||| |||||||||| ||||||||    
T  2870995 tagtggttgaagctcacacatattaaatttggagaagt-aggtgtttggggttcgaac 2870939  T

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Target: chr4; HSP #21
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 142 - 199
Target Start/End: Complemental strand, 3785022 - 3784966
Alignment:
Q  142 tagtggttggagctcacacattttaaatgtagagaagtgaggtgtttggagttcgaac 199  Q
    |||||| ||||||||||||| ||||||||| |||||||| |||||| || ||||||||    
T  3785022 tagtggctggagctcacaca-tttaaatgtggagaagtgtggtgttcggggttcgaac 3784966  T

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Target: chr4; HSP #22
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 142 - 223
Target Start/End: Complemental strand, 30057334 - 30057253
Alignment:
Q  142 tagtggttggagctcacacattttaaatgtagagaagtgaggtgtttggagttcgaactccgtcccgtgcatatattatgca 223  Q
    |||||||| ||||||||||| ||||| ||| |||||||| |||||  || ||| |||| ||| ||| |||||||| ||||||    
T  30057334 tagtggttagagctcacacaatttaattgtggagaagtggggtgtccggggtttgaaccccgacccctgcatataatatgca 30057253  T

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Target: chr4; HSP #23
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 150 - 223
Target Start/End: Complemental strand, 39401105 - 39401032
Alignment:
Q  150 ggagctcacacattttaaatgtagagaagtgaggtgtttggagttcgaactccgtcccgtgcatatattatgca 223  Q
    ||||||||||||| || ||||| |||||||| ||||||  | ||| ||||| || ||| |||||||||||||||    
T  39401105 ggagctcacacatatttaatgtggagaagtgtggtgttcagggtttgaacttcgacccctgcatatattatgca 39401032  T

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Target: chr4; HSP #24
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 142 - 223
Target Start/End: Original strand, 42134415 - 42134496
Alignment:
Q  142 tagtggttggagctcacacattttaaatgtagagaagtgaggtgtttggagttcgaactccgtcccgtgcatatattatgca 223  Q
    |||||| | ||||||||| | ||||| ||| |||||||| |||||  ||||||||||| ||| ||| |||||||| ||||||    
T  42134415 tagtggctagagctcacataatttaattgtggagaagtggggtgtccggagttcgaaccccgacccttgcatataatatgca 42134496  T

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Target: chr4; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 142 - 223
Target Start/End: Original strand, 44568178 - 44568258
Alignment:
Q  142 tagtggttggagctcacacattttaaatgtagagaagtgaggtgtttggagttcgaactccgtcccgtgcatatattatgca 223  Q
    |||||| | ||||||||||| || |||| | |||||||||||||| | |||||||||| ||| ||| |||||||| ||||||    
T  44568178 tagtggcttgagctcacacaatt-aaatatggagaagtgaggtgtctcgagttcgaaccccgacccctgcatataatatgca 44568258  T

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Target: chr4; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 142 - 223
Target Start/End: Original strand, 45303942 - 45304022
Alignment:
Q  142 tagtggttggagctcacacattttaaatgtagagaagtgaggtgtttggagttcgaactccgtcccgtgcatatattatgca 223  Q
    |||||| |||| |||||||||||| ||||| |||||||| |||||  || ||||||||| |  ||| |||||||||||||||    
T  45303942 tagtggctggaactcacacatttttaatgtggagaagtggggtgtccgg-gttcgaacttcaacccttgcatatattatgca 45304022  T

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Target: chr4; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 142 - 223
Target Start/End: Complemental strand, 55021666 - 55021585
Alignment:
Q  142 tagtggttggagctcacacattttaaatgtagagaagtgaggtgtttggagttcgaactccgtcccgtgcatatattatgca 223  Q
    |||||| | ||||||||||| ||||| ||| ||||||||| ||||  || |||||||| ||| ||| |||||||| ||||||    
T  55021666 tagtggctagagctcacacaatttaattgtggagaagtgaagtgtccggggttcgaaccccgacccctgcatataatatgca 55021585  T

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Target: chr4; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 142 - 190
Target Start/End: Original strand, 3039167 - 3039215
Alignment:
Q  142 tagtggttggagctcacacattttaaatgtagagaagtgaggtgtttgg 190  Q
    ||||||||| |||||||||||||||||| |  ||||||||| |||||||    
T  3039167 tagtggttgaagctcacacattttaaatatgaagaagtgagctgtttgg 3039215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 142 - 186
Target Start/End: Complemental strand, 3161134 - 3161090
Alignment:
Q  142 tagtggttggagctcacacattttaaatgtagagaagtgaggtgt 186  Q
    |||||| || |||||||||||||||||||| ||||||||| ||||    
T  3161134 tagtggctgtagctcacacattttaaatgtggagaagtgaagtgt 3161090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 151 - 223
Target Start/End: Complemental strand, 32339427 - 32339355
Alignment:
Q  151 gagctcacacattttaaatgtagagaagtgaggtgtttggagttcgaactccgtcccgtgcatatattatgca 223  Q
    ||||||| |||||||||||| | ||||||| ||||| ||| ||| |||| ||| ||| |||||||| ||||||    
T  32339427 gagctcagacattttaaatgcaaagaagtggggtgtctggggtttgaaccccgacccttgcatataatatgca 32339355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 142 - 186
Target Start/End: Original strand, 37442031 - 37442075
Alignment:
Q  142 tagtggttggagctcacacattttaaatgtagagaagtgaggtgt 186  Q
    |||||| ||||||||||| ||||||||| |||||||||| |||||    
T  37442031 tagtggctggagctcacaaattttaaatatagagaagtgcggtgt 37442075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 142 - 214
Target Start/End: Original strand, 38848079 - 38848150
Alignment:
Q  142 tagtggttggagctcacacattttaaatgtagagaagtgaggtgtttggagttcgaactccgtcccgtgcata 214  Q
    |||||||| ||||||||||| ||||||||| |||||||| |||||  || |||||||| ||| ||| ||||||    
T  38848079 tagtggttagagctcacaca-tttaaatgtggagaagtggggtgtccggggttcgaaccccgacccctgcata 38848150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 155 - 223
Target Start/End: Original strand, 45665002 - 45665070
Alignment:
Q  155 tcacacattttaaatgtagagaagtgaggtgtttggagttcgaactccgtcccgtgcatatattatgca 223  Q
    |||||||| || ||||| |||||||| | ||||||| |||||||| |||  || |||||||||||||||    
T  45665002 tcacacatatttaatgtggagaagtgggatgtttggggttcgaacaccggtccctgcatatattatgca 45665070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 142 - 182
Target Start/End: Complemental strand, 47586330 - 47586290
Alignment:
Q  142 tagtggttggagctcacacattttaaatgtagagaagtgag 182  Q
    ||||| || ||||||||||||||||||||| ||||||||||    
T  47586330 tagtgatttgagctcacacattttaaatgtggagaagtgag 47586290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 151 - 223
Target Start/End: Complemental strand, 49056878 - 49056806
Alignment:
Q  151 gagctcacacattttaaatgtagagaagtgaggtgtttggagttcgaactccgtcccgtgcatatattatgca 223  Q
    ||||||||||| ||||| ||| |||||||| |||||  || |||||||||||| | | |||||||| ||||||    
T  49056878 gagctcacacaatttaattgtggagaagtggggtgtccggggttcgaactccggctcctgcatataatatgca 49056806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 151 - 199
Target Start/End: Complemental strand, 54215864 - 54215816
Alignment:
Q  151 gagctcacacattttaaatgtagagaagtgaggtgtttggagttcgaac 199  Q
    ||||||||| ||||||||||| |||||||| ||||| ||| ||||||||    
T  54215864 gagctcacatattttaaatgtggagaagtggggtgtctggggttcgaac 54215816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 19)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 142 - 216
Target Start/End: Complemental strand, 18904377 - 18904303
Alignment:
Q  142 tagtggttggagctcacacattttaaatgtagagaagtgaggtgtttggagttcgaactccgtcccgtgcatata 216  Q
    |||||| ||||||||||||||||||||||| |||||||| |||||  || |||||||| ||| ||| ||||||||    
T  18904377 tagtggctggagctcacacattttaaatgtggagaagtggggtgtccggggttcgaaccccgacccctgcatata 18904303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 142 - 216
Target Start/End: Original strand, 32621540 - 32621614
Alignment:
Q  142 tagtggttggagctcacacattttaaatgtagagaagtgaggtgtttggagttcgaactccgtcccgtgcatata 216  Q
    |||||| ||||||||||||||||||||||| |||||||| ||||| |||  ||||||| ||| ||| ||||||||    
T  32621540 tagtggctggagctcacacattttaaatgtggagaagtggggtgtctgggattcgaaccccggcccctgcatata 32621614  T

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Target: chr6; HSP #3
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 142 - 223
Target Start/End: Complemental strand, 3709971 - 3709890
Alignment:
Q  142 tagtggttggagctcacacattttaaatgtagagaagtgaggtgtttggagttcgaactccgtcccgtgcatatattatgca 223  Q
    |||||| |||||||| |||||||||||||| |||||||| ||||| ||| |||||||| ||  ||| |||||||| ||||||    
T  3709971 tagtggctggagctctcacattttaaatgtggagaagtggggtgtctggggttcgaaccccaccccttgcatataatatgca 3709890  T

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Target: chr6; HSP #4
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 142 - 223
Target Start/End: Original strand, 6196307 - 6196388
Alignment:
Q  142 tagtggttggagctcacacattttaaatgtagagaagtgaggtgtttggagttcgaactccgtcccgtgcatatattatgca 223  Q
    ||||||||  ||||||||||||||||| || |||||||||| ||| |||||||||||| | | ||| | |||||||||||||    
T  6196307 tagtggttaaagctcacacattttaaacgtggagaagtgagatgtatggagttcgaacccggacccctacatatattatgca 6196388  T

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Target: chr6; HSP #5
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 131 - 199
Target Start/End: Original strand, 1368134 - 1368202
Alignment:
Q  131 gtcaaataacatagtggttggagctcacacattttaaatgtagagaagtgaggtgtttggagttcgaac 199  Q
    ||||| |||| |||| | ||||||||||||||||||||||| |||||||| ||||| ||||||| ||||    
T  1368134 gtcaagtaacttagtcgctggagctcacacattttaaatgtggagaagtggggtgtctggagtttgaac 1368202  T

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Target: chr6; HSP #6
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 131 - 177
Target Start/End: Original strand, 2044587 - 2044633
Alignment:
Q  131 gtcaaataacatagtggttggagctcacacattttaaatgtagagaa 177  Q
    ||||| || ||||||||||| ||||||||||||||||||||||||||    
T  2044587 gtcaagtagcatagtggttgaagctcacacattttaaatgtagagaa 2044633  T

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Target: chr6; HSP #7
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 144 - 190
Target Start/End: Original strand, 31980919 - 31980965
Alignment:
Q  144 gtggttggagctcacacattttaaatgtagagaagtgaggtgtttgg 190  Q
    |||||||||||||||||||||||||  | ||||||||||||||||||    
T  31980919 gtggttggagctcacacattttaaacatggagaagtgaggtgtttgg 31980965  T

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Target: chr6; HSP #8
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 142 - 199
Target Start/End: Original strand, 32141994 - 32142051
Alignment:
Q  142 tagtggttggagctcacacattttaaatgtagagaagtgaggtgtttggagttcgaac 199  Q
    |||||| ||||||||||||||||||||||| || ||||| ||||| ||| ||||||||    
T  32141994 tagtggctggagctcacacattttaaatgtggaaaagtggggtgtctggggttcgaac 32142051  T

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Target: chr6; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 155 - 223
Target Start/End: Complemental strand, 20846145 - 20846077
Alignment:
Q  155 tcacacattttaaatgtagagaagtgaggtgtttggagttcgaactccgtcccgtgcatatattatgca 223  Q
    |||||||||||||||||||||||||| ||||| | | |||||||| ||  ||  |||||||||||||||    
T  20846145 tcacacattttaaatgtagagaagtgtggtgtatagggttcgaaccccaaccactgcatatattatgca 20846077  T

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Target: chr6; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 142 - 182
Target Start/End: Original strand, 29646709 - 29646749
Alignment:
Q  142 tagtggttggagctcacacattttaaatgtagagaagtgag 182  Q
    |||| |||| |||||||||||||||||||||||||||||||    
T  29646709 tagtagttgaagctcacacattttaaatgtagagaagtgag 29646749  T

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Target: chr6; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 142 - 186
Target Start/End: Complemental strand, 32616496 - 32616452
Alignment:
Q  142 tagtggttggagctcacacattttaaatgtagagaagtgaggtgt 186  Q
    |||||| |||||||||||||||||||||| ||||||||| |||||    
T  32616496 tagtggctggagctcacacattttaaatgcagagaagtggggtgt 32616452  T

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Target: chr6; HSP #12
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 140 - 199
Target Start/End: Complemental strand, 361277 - 361218
Alignment:
Q  140 catagtggttggagctcacacattttaaatgtagagaagtgaggtgtttggagttcgaac 199  Q
    |||||||| | ||||||||| ||||||||| | |||||||| ||||| ||||||||||||    
T  361277 catagtggctagagctcacatattttaaatatggagaagtggggtgtctggagttcgaac 361218  T

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Target: chr6; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 142 - 216
Target Start/End: Complemental strand, 8297739 - 8297665
Alignment:
Q  142 tagtggttggagctcacacattttaaatgtagagaagtgaggtgtttggagttcgaactccgtcccgtgcatata 216  Q
    |||||||| ||||||||||| ||||| ||| |||||||| |||||  || |||||||| ||| ||| ||||||||    
T  8297739 tagtggttagagctcacacaatttaattgtggagaagtggggtgtccggggttcgaaccccggcccctgcatata 8297665  T

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Target: chr6; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 150 - 220
Target Start/End: Complemental strand, 31886500 - 31886430
Alignment:
Q  150 ggagctcacacattttaaatgtagagaagtgaggtgtttggagttcgaactccgtcccgtgcatatattat 220  Q
    ||||||||||||| |||||||||||||||||  |||||||  ||| ||||| || |||  |||||||||||    
T  31886500 ggagctcacacatattaaatgtagagaagtggagtgtttgaggtttgaactacgacccccgcatatattat 31886430  T

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Target: chr6; HSP #15
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 142 - 223
Target Start/End: Complemental strand, 7545441 - 7545360
Alignment:
Q  142 tagtggttggagctcacacattttaaatgtagagaagtgaggtgtttggagttcgaactccgtcccgtgcatatattatgca 223  Q
    |||||| | ||||||||||| ||||| ||| |||||||| |||||| || |||||||| | | ||| |||||||| ||||||    
T  7545441 tagtggctagagctcacacaatttaattgtggagaagtggggtgttcggggttcgaaccctggcccctgcatataatatgca 7545360  T

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Target: chr6; HSP #16
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 133 - 186
Target Start/End: Original strand, 24878163 - 24878216
Alignment:
Q  133 caaataacatagtggttggagctcacacattttaaatgtagagaagtgaggtgt 186  Q
    |||||| |||||| ||| |||||||||||||| |||||| |||||||| |||||    
T  24878163 caaatagcatagttgttagagctcacacatttgaaatgtggagaagtggggtgt 24878216  T

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Target: chr6; HSP #17
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 131 - 199
Target Start/End: Complemental strand, 2711553 - 2711485
Alignment:
Q  131 gtcaaataacatagtggttggagctcacacattttaaatgtagagaagtgaggtgtttggagttcgaac 199  Q
    |||||||||| |||||  |||||||||||  |||||||||  |||||||| |||||  |||||||||||    
T  2711553 gtcaaataacctagtgactggagctcacaacttttaaatgcggagaagtggggtgtccggagttcgaac 2711485  T

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Target: chr6; HSP #18
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 142 - 186
Target Start/End: Complemental strand, 28021344 - 28021300
Alignment:
Q  142 tagtggttggagctcacacattttaaatgtagagaagtgaggtgt 186  Q
    |||||| ||||||||||||||| ||||||| |||||||| |||||    
T  28021344 tagtggctggagctcacacattataaatgtggagaagtggggtgt 28021300  T

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Target: chr6; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 151 - 223
Target Start/End: Original strand, 32049932 - 32050004
Alignment:
Q  151 gagctcacacattttaaatgtagagaagtgaggtgtttggagttcgaactccgtcccgtgcatatattatgca 223  Q
    ||||||||||| ||||| ||| ||||||||  ||||| ||||||||||| ||| | | |||||||| ||||||    
T  32049932 gagctcacacaatttaattgtggagaagtggagtgttcggagttcgaaccccggctcctgcatataatatgca 32050004  T

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Target: scaffold0141 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0141
Description:

Target: scaffold0141; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 145 - 186
Target Start/End: Complemental strand, 39911 - 39870
Alignment:
Q  145 tggttggagctcacacattttaaatgtagagaagtgaggtgt 186  Q
    ||||| || |||||||||||||||||||||| ||||||||||    
T  39911 tggttagaactcacacattttaaatgtagaggagtgaggtgt 39870  T

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Target: scaffold0088 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0088
Description:

Target: scaffold0088; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 142 - 223
Target Start/End: Original strand, 10784 - 10865
Alignment:
Q  142 tagtggttggagctcacacattttaaatgtagagaagtgaggtgtttggagttcgaactccgtcccgtgcatatattatgca 223  Q
    |||||| | ||||||||||| ||||| ||| |||||||| |||||  || |||||||| ||| ||| |||||||| ||||||    
T  10784 tagtggctagagctcacacaatttaattgtggagaagtggggtgtccggggttcgaaccccggcccctgcatataatatgca 10865  T

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Target: scaffold0049 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 145 - 186
Target Start/End: Original strand, 74901 - 74942
Alignment:
Q  145 tggttggagctcacacattttaaatgtagagaagtgaggtgt 186  Q
    ||||| || |||||||||||||||||||||| ||||||||||    
T  74901 tggttagaactcacacattttaaatgtagaggagtgaggtgt 74942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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