View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF3295_high_9 (Length: 424)
Name: NF3295_high_9
Description: NF3295
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3295_high_9 |
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Alignment Details
Target: chr7 (Bit Score: 245; Significance: 1e-136; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 245; E-Value: 1e-136
Query Start/End: Original strand, 121 - 381
Target Start/End: Original strand, 4709249 - 4709509
Alignment:
| Q |
121 |
tgtgttttggcggtgttaacatttcactgggtgaccttatctacttcgaatgtatttgattgttttaatttttgggttaactatacctacgactaatact |
220 |
Q |
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| T |
4709249 |
tgtgttttggcggtgttaacatttcactgggcgaccttatatacttcaaatgtatttgattgttttaatttttgggttaactatacctacgactaatact |
4709348 |
T |
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| Q |
221 |
tttctccataggtatagcttttctatacctacgatttaaaatccgtcactataaacctccgttggcatatgccattttcttgcagtagtaattggacaaa |
320 |
Q |
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|||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
4709349 |
tttctccataggtatagcttttctatacctactatttaaaatccgtcactataaacctccgttggcatatgccattttcttgcagtagtaattggacaaa |
4709448 |
T |
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| Q |
321 |
catatataatcaacatcaattgcttgaaagacaaatgcgttactcatcgaagtggagatgg |
381 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
4709449 |
catatataatcaacatcaattgcttgaaagacaaatgcgttactcatcgaagtggagatgg |
4709509 |
T |
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