View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF3295_low_25 (Length: 232)
Name: NF3295_low_25
Description: NF3295
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3295_low_25 |
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Alignment Details
Target: chr1 (Bit Score: 147; Significance: 1e-77; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 147; E-Value: 1e-77
Query Start/End: Original strand, 6 - 171
Target Start/End: Complemental strand, 32124714 - 32124544
Alignment:
| Q |
6 |
agtagcataggaggaggtataaaacggtgtcgtactcggagagcctaaaaacaaaacacttgtgcaagagcgactagcgtcactgacccgcccctcc--- |
102 |
Q |
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| T |
32124714 |
agtaacataggaggaggtataaaacggtgtcgtactcggagagcctaaaaacaaaacacttgtgcaagagcgactagcgtcactgacccgcccctccctt |
32124615 |
T |
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| Q |
103 |
--cttcgtggttgttgaagtcgagagccggtgctcatcttccgccccatcgccgccatgaagctcgtcagg |
171 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32124614 |
cccttcgtggttgttgaagtcgagagccggtgctcatcttccgccccatcgccgccatgaagctcgtcagg |
32124544 |
T |
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