View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF3296_high_67 (Length: 250)

Name: NF3296_high_67
Description: NF3296
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF3296_high_67
NF3296_high_67
[»] chr4 (27 HSPs)
chr4 (1-237)||(436928-437164)
chr4 (2-82)||(21731575-21731655)
chr4 (1-82)||(54426113-54426194)
chr4 (1-69)||(22030273-22030341)
chr4 (8-76)||(40174634-40174702)
chr4 (10-69)||(49003974-49004033)
chr4 (1-75)||(49939877-49939951)
chr4 (1-82)||(1374495-1374576)
chr4 (1-82)||(13126495-13126576)
chr4 (1-82)||(18815093-18815174)
chr4 (1-82)||(39603090-39603170)
chr4 (1-81)||(44320018-44320099)
chr4 (2-82)||(35571550-35571630)
chr4 (1-40)||(4691917-4691956)
chr4 (3-82)||(49940086-49940165)
chr4 (8-82)||(8705018-8705092)
chr4 (1-47)||(25332845-25332891)
chr4 (1-82)||(17822784-17822865)
chr4 (2-82)||(23319924-23320002)
chr4 (17-82)||(24169349-24169414)
chr4 (1-77)||(52172794-52172871)
chr4 (1-82)||(55437146-55437227)
chr4 (1-81)||(23459697-23459777)
chr4 (1-69)||(25904155-25904223)
chr4 (26-82)||(39691068-39691124)
chr4 (1-41)||(45622310-45622350)
chr4 (149-229)||(50699154-50699234)
[»] chr5 (23 HSPs)
chr5 (1-82)||(7705917-7705998)
chr5 (1-82)||(16937802-16937883)
chr5 (1-82)||(12857257-12857338)
chr5 (1-75)||(3520647-3520721)
chr5 (1-82)||(12857624-12857705)
chr5 (1-82)||(15246903-15246984)
chr5 (1-73)||(29925911-29925982)
chr5 (8-82)||(11104981-11105056)
chr5 (1-84)||(11700232-11700315)
chr5 (8-42)||(32009770-32009804)
chr5 (1-51)||(39248168-39248218)
chr5 (8-58)||(41981646-41981696)
chr5 (16-70)||(42569543-42569597)
chr5 (1-82)||(10640023-10640104)
chr5 (1-42)||(16457938-16457979)
chr5 (156-221)||(38749565-38749629)
chr5 (1-82)||(41419389-41419470)
chr5 (1-82)||(41534508-41534589)
chr5 (10-74)||(15015922-15015986)
chr5 (156-212)||(28296330-28296385)
chr5 (12-84)||(34736444-34736516)
chr5 (156-212)||(42621476-42621531)
chr5 (8-84)||(43300955-43301031)
[»] chr2 (18 HSPs)
chr2 (1-82)||(4606995-4607076)
chr2 (1-82)||(43036626-43036707)
chr2 (1-82)||(15305744-15305825)
chr2 (9-82)||(15757577-15757650)
chr2 (1-82)||(27317449-27317530)
chr2 (1-82)||(30331821-30331902)
chr2 (1-82)||(42659130-42659211)
chr2 (1-82)||(787401-787483)
chr2 (119-153)||(14762890-14762924)
chr2 (1-82)||(26143561-26143640)
chr2 (2-48)||(36534839-36534885)
chr2 (2-39)||(19629431-19629468)
chr2 (2-39)||(19826332-19826369)
chr2 (10-82)||(41170688-41170761)
chr2 (1-42)||(41293122-41293163)
chr2 (8-84)||(20952432-20952508)
chr2 (1-69)||(24100998-24101066)
chr2 (1-29)||(26857083-26857111)
[»] chr1 (28 HSPs)
chr1 (1-82)||(2295166-2295247)
chr1 (3-82)||(50644174-50644253)
chr1 (2-82)||(3233934-3234014)
chr1 (1-81)||(42575389-42575469)
chr1 (1-80)||(2777961-2778040)
chr1 (1-82)||(38247397-38247478)
chr1 (10-58)||(38480517-38480565)
chr1 (1-80)||(5720995-5721074)
chr1 (1-80)||(5741676-5741755)
chr1 (13-82)||(14385712-14385781)
chr1 (1-82)||(14576573-14576654)
chr1 (2-78)||(14737649-14737726)
chr1 (4-69)||(38116190-38116255)
chr1 (13-82)||(41162969-41163038)
chr1 (1-69)||(6557042-6557110)
chr1 (1-69)||(29904821-29904889)
chr1 (8-82)||(2295267-2295342)
chr1 (1-48)||(38001665-38001712)
chr1 (8-82)||(34795365-34795439)
chr1 (1-58)||(489260-489317)
chr1 (1-82)||(7941676-7941757)
chr1 (1-82)||(27146174-27146255)
chr1 (17-82)||(34952288-34952353)
chr1 (10-82)||(473242-473314)
chr1 (6-81)||(6659754-6659830)
chr1 (156-212)||(26777379-26777435)
chr1 (13-69)||(33204326-33204382)
chr1 (1-49)||(49938817-49938865)
[»] chr8 (26 HSPs)
chr8 (8-80)||(43717855-43717927)
chr8 (2-78)||(28763439-28763515)
chr8 (1-82)||(16162829-16162911)
chr8 (13-82)||(9130238-9130307)
chr8 (2-82)||(30251373-30251453)
chr8 (10-82)||(35643907-35643979)
chr8 (3-82)||(43045644-43045723)
chr8 (16-82)||(36963273-36963339)
chr8 (1-82)||(26771335-26771415)
chr8 (156-228)||(10002165-10002237)
chr8 (8-48)||(27754480-27754520)
chr8 (1-69)||(35534545-35534613)
chr8 (2-82)||(41589657-41589737)
chr8 (2-84)||(2487925-2488008)
chr8 (157-208)||(3508058-3508108)
chr8 (123-173)||(5481951-5482001)
chr8 (196-230)||(13487866-13487900)
chr8 (2-84)||(29818861-29818943)
chr8 (13-78)||(6525899-6525964)
chr8 (1-42)||(32840945-32840986)
chr8 (1-82)||(44792726-44792807)
chr8 (9-69)||(1058009-1058069)
chr8 (8-80)||(12496993-12497065)
chr8 (8-84)||(12976289-12976365)
chr8 (8-79)||(31884862-31884934)
chr8 (1-81)||(40859703-40859782)
[»] chr7 (24 HSPs)
chr7 (1-82)||(4970711-4970792)
chr7 (2-78)||(33678851-33678927)
chr7 (4-52)||(44989626-44989674)
chr7 (156-208)||(25655490-25655542)
chr7 (13-80)||(18765366-18765433)
chr7 (1-82)||(19302482-19302563)
chr7 (8-69)||(27863657-27863718)
chr7 (2-42)||(22940015-22940055)
chr7 (1-69)||(33601342-33601410)
chr7 (1-80)||(3927931-3928010)
chr7 (1-40)||(25670548-25670587)
chr7 (162-221)||(38134414-38134472)
chr7 (1-82)||(48470114-48470195)
chr7 (1-78)||(420430-420507)
chr7 (1-82)||(5947311-5947392)
chr7 (2-51)||(21568445-21568494)
chr7 (6-83)||(33266404-33266481)
chr7 (1-82)||(40687466-40687547)
chr7 (164-208)||(6807212-6807256)
chr7 (156-208)||(21247738-21247789)
chr7 (1-84)||(23214924-23215008)
chr7 (2-42)||(27288018-27288058)
chr7 (1-65)||(33601963-33602027)
chr7 (1-49)||(48507800-48507847)
[»] chr3 (20 HSPs)
chr3 (1-78)||(31365111-31365188)
chr3 (1-82)||(39980799-39980880)
chr3 (1-85)||(20880546-20880630)
chr3 (1-80)||(21367737-21367816)
chr3 (1-82)||(44014717-44014799)
chr3 (169-230)||(28590857-28590917)
chr3 (8-80)||(18405752-18405824)
chr3 (1-81)||(24085258-24085338)
chr3 (1-69)||(46778123-46778191)
chr3 (3-81)||(584118-584196)
chr3 (8-82)||(902001-902074)
chr3 (1-48)||(37389253-37389300)
chr3 (1-79)||(46886614-46886692)
chr3 (1-82)||(24684741-24684822)
chr3 (2-39)||(45535183-45535220)
chr3 (10-82)||(47132397-47132467)
chr3 (26-82)||(20170633-20170689)
chr3 (163-223)||(23623059-23623118)
chr3 (156-208)||(27513664-27513716)
chr3 (8-84)||(43046742-43046817)
[»] chr6 (16 HSPs)
chr6 (1-82)||(9559460-9559539)
chr6 (2-75)||(2455330-2455403)
chr6 (1-84)||(4163223-4163306)
chr6 (1-84)||(4224844-4224927)
chr6 (4-83)||(10645303-10645382)
chr6 (1-48)||(20368134-20368181)
chr6 (9-75)||(2455066-2455132)
chr6 (9-82)||(848067-848139)
chr6 (147-207)||(28486788-28486848)
chr6 (147-207)||(29799201-29799261)
chr6 (10-49)||(31813240-31813279)
chr6 (1-82)||(24626357-24626441)
chr6 (1-82)||(34430785-34430865)
chr6 (1-41)||(26559200-26559240)
chr6 (2-69)||(27897161-27897229)
chr6 (1-29)||(34633096-34633124)
[»] scaffold0057 (1 HSPs)
scaffold0057 (1-70)||(24691-24760)
[»] scaffold0022 (1 HSPs)
scaffold0022 (156-221)||(99886-99950)


Alignment Details
Target: chr4 (Bit Score: 221; Significance: 1e-122; HSPs: 27)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 221; E-Value: 1e-122
Query Start/End: Original strand, 1 - 237
Target Start/End: Complemental strand, 437164 - 436928
Alignment:
Q  1 cataagttgttttcataagttttcccaaatagtctcacaaaagttatgctactagatatgctcaaataaaccaatccaaacatgtgtcacatgtataata 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  437164 cataagttgttttcataagttttcccaaatagtctcacaaaagttatgctactagatatgctcaaataaaccaatccaaacatgtgtcacatgtataata 437065  T
Q  101 cagacattttttatcatcgaaggcgtgtccggtgtccgacacgtatcagtgtcctacaccaacacacatgattaccttcaattatgttatttttctcaaa 200  Q
    |  |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  437064 cgtacattttttatcatcgaaggcgtgtctggtgtccgacacgtatcagtgtcctacaccaacacacatgattaccttcaattatgttatttttctcaaa 436965  T
Q  201 ttattatcggtggcaacatgttagtgtcaggtgcttc 237  Q
    ||||||||||||||||||| |||||||||||||||||    
T  436964 ttattatcggtggcaacatattagtgtcaggtgcttc 436928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 2 - 82
Target Start/End: Complemental strand, 21731655 - 21731575
Alignment:
Q  2 ataagttgttttcataagttttcccaaatagtctcacaaaagttatgctactagatatgctcaaataaaccaatccaaaca 82  Q
    ||||| |||||||||||||| ||||||| | |||||||||| |||||  | ||||||||||||||||||||||||||||||    
T  21731655 ataagctgttttcataagttctcccaaacaatctcacaaaacttatgtcagtagatatgctcaaataaaccaatccaaaca 21731575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 54426113 - 54426194
Alignment:
Q  1 cataagttgttttcataagttttcccaaatagtctcacaaaagttatgctactagatatgctcaaataaaccaatccaaaca 82  Q
    |||||| ||||||| |||||| ||||||  |||||||||||| |||||| | |||||| |||||||||| ||||||||||||    
T  54426113 cataagctgttttcctaagttctcccaagcagtctcacaaaacttatgccagtagataagctcaaataagccaatccaaaca 54426194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 22030273 - 22030341
Alignment:
Q  1 cataagttgttttcataagttttcccaaatagtctcacaaaagttatgctactagatatgctcaaataa 69  Q
    |||||| |||||||||||||| |||||||||| ||||||||| |||||||| |||| | ||||||||||    
T  22030273 cataagctgttttcataagttctcccaaataggctcacaaaacttatgctaatagacaagctcaaataa 22030341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 8 - 76
Target Start/End: Original strand, 40174634 - 40174702
Alignment:
Q  8 tgttttcataagttttcccaaatagtctcacaaaagttatgctactagatatgctcaaataaaccaatc 76  Q
    |||||||||||||| ||||||| |||||||||||| ||||| || ||||||  |||||||||| |||||    
T  40174634 tgttttcataagttatcccaaacagtctcacaaaacttatgttagtagataaactcaaataaatcaatc 40174702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 10 - 69
Target Start/End: Complemental strand, 49004033 - 49003974
Alignment:
Q  10 ttttcataagttttcccaaatagtctcacaaaagttatgctactagatatgctcaaataa 69  Q
    |||||||||||| || ||||||||||||||||| ||| |||| |||||| ||||||||||    
T  49004033 ttttcataagttctctcaaatagtctcacaaaacttaagctagtagataagctcaaataa 49003974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 49939951 - 49939877
Alignment:
Q  1 cataagttgttttcataagttttcccaaatagtctcacaaaagttatgctactagatatgctcaaataaaccaat 75  Q
    |||||| | |||||||||||| | |||||||||||||||||  |||||||| |||||| ||| |||||| |||||    
T  49939951 cataagctcttttcataagttcttccaaatagtctcacaaagcttatgctagtagataagcttaaataagccaat 49939877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 1374576 - 1374495
Alignment:
Q  1 cataagttgttttcataagttttcccaaatagtctcacaaaagttatgctactagatatgctcaaataaaccaatccaaaca 82  Q
    |||||||||||||||||  || ||||||| ||  |||||||| |||||||| |||||| |||||| ||| ||||||| ||||    
T  1374576 cataagttgttttcatatattctcccaaacagaatcacaaaatttatgctagtagataagctcaattaagccaatcctaaca 1374495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 13126576 - 13126495
Alignment:
Q  1 cataagttgttttcataagttttcccaaatagtctcacaaaagttatgctactagatatgctcaaataaaccaatccaaaca 82  Q
    |||||| |||||| ||||||| | ||||| |||||||||||| ||||| || ||| || ||| |||||| ||||||||||||    
T  13126576 cataagctgtttttataagttcttccaaacagtctcacaaaacttatgttagtaggtaagctaaaataagccaatccaaaca 13126495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 18815093 - 18815174
Alignment:
Q  1 cataagttgttttcataagttttcccaaatagtctcacaaaagttatgctactagatatgctcaaataaaccaatccaaaca 82  Q
    |||||| ||| || || |||| || |||| |||||||||||| |||||||| ||| || |||||||||| ||||||||||||    
T  18815093 cataagctgtctttattagttctctcaaacagtctcacaaaacttatgctagtaggtaagctcaaataagccaatccaaaca 18815174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 39603170 - 39603090
Alignment:
Q  1 cataagttgttttcataagttttcccaaatagtctcacaaaagttatgctactagatatgctcaaataaaccaatccaaaca 82  Q
    |||||| ||||||| |||||| ||||||| |||||||||||| |||| | | |||| | |||||||||| ||||||||||||    
T  39603170 cataagctgttttcctaagttctcccaaacagtctcacaaaacttataccaataga-aagctcaaataagccaatccaaaca 39603090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 44320018 - 44320099
Alignment:
Q  1 cataagttgttttcataagttttcccaaatagtctcacaaaag-ttatgctactagatatgctcaaataaaccaatccaaac 81  Q
    ||||| ||||||||||||| | ||||||| ||||||||||  | |||||| | ||| || ||||||||||||||||||||||    
T  44320018 cataatttgttttcataagctctcccaaacagtctcacaattgtttatgccaataggtaagctcaaataaaccaatccaaac 44320099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 2 - 82
Target Start/End: Complemental strand, 35571630 - 35571550
Alignment:
Q  2 ataagttgttttcataagttttcccaaatagtctcacaaaagttatgctactagatatgctcaaataaaccaatccaaaca 82  Q
    ||||| |||||| | ||||| |||||||   || ||||||| |||||||| |||||| |||||||||| ||||||||||||    
T  35571630 ataagctgtttttaaaagttctcccaaactatcccacaaaacttatgctagtagataagctcaaataagccaatccaaaca 35571550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 4691917 - 4691956
Alignment:
Q  1 cataagttgttttcataagttttcccaaatagtctcacaa 40  Q
    |||||||||||| ||||||||||| |||||||||||||||    
T  4691917 cataagttgtttccataagttttctcaaatagtctcacaa 4691956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 3 - 82
Target Start/End: Complemental strand, 49940165 - 49940086
Alignment:
Q  3 taagttgttttcataagttttcccaaatagtctcacaaaagttatgctactagatatgctcaaataaaccaatccaaaca 82  Q
    |||| |||||||||||||| || |||| |||||||||||| ||||| ||  || || ||||||||||  |||||||||||    
T  49940165 taagctgttttcataagttctctcaaacagtctcacaaaacttatgttagcaggtaagctcaaataagtcaatccaaaca 49940086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 8 - 82
Target Start/End: Original strand, 8705018 - 8705092
Alignment:
Q  8 tgttttcataagttttcccaaatagtctcacaaaagttatgctactagatatgctcaaataaaccaatccaaaca 82  Q
    |||||| ||||||| ||||||  |||||||||||| |||||  | |||||| |||||||| | ||||||||||||    
T  8705018 tgtttttataagttctcccaatcagtctcacaaaacttatgtcaatagataagctcaaatgagccaatccaaaca 8705092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 25332845 - 25332891
Alignment:
Q  1 cataagttgttttcataagttttcccaaatagtctcacaaaagttat 47  Q
    ||||||||||||||  ||||| |||||||||||||||||||| ||||    
T  25332845 cataagttgttttcgcaagttctcccaaatagtctcacaaaacttat 25332891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 17822865 - 17822784
Alignment:
Q  1 cataagttgttttcataagttttcccaaatagtctcacaaaagttatgctactagatatgctcaaataaaccaatccaaaca 82  Q
    |||||| |||||||||| ||| ||| ||||||||||||| || |||||  | |||||| ||||||||||   ||||||||||    
T  17822865 cataagctgttttcatatgttctcctaaatagtctcacagaacttatgtcagtagataagctcaaataagttaatccaaaca 17822784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 2 - 82
Target Start/End: Original strand, 23319924 - 23320002
Alignment:
Q  2 ataagttgttttcataagttttcccaaatagtctcacaaaagttatgctactagatatgctcaaataaaccaatccaaaca 82  Q
    ||||| ||||||||||| || ||||||| |||||||  |||  ||||||| ||||||  ||||||||| ||||||||||||    
T  23319924 ataagctgttttcataacttctcccaaacagtctca--aaatgtatgctagtagataatctcaaataagccaatccaaaca 23320002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 17 - 82
Target Start/End: Original strand, 24169349 - 24169414
Alignment:
Q  17 aagttttcccaaatagtctcacaaaagttatgctactagatatgctcaaataaaccaatccaaaca 82  Q
    ||||| || ||||||||||||||||| |||||| | ||||||  ||| ||||| ||||||||||||    
T  24169349 aagttctctcaaatagtctcacaaaacttatgccagtagataaactctaataagccaatccaaaca 24169414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 52172794 - 52172871
Alignment:
Q  1 cataagttgttttcataagttttcccaaatagtctcacaaa-agttatgctactagatatgctcaaataaaccaatcc 77  Q
    |||||| ||||||||||||||||||| || ||||||||||| | |||||| | ||  || |||||||||| |||||||    
T  52172794 cataagctgttttcataagttttccccaacagtctcacaaatacttatgccagtatgtaagctcaaataagccaatcc 52172871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 55437146 - 55437227
Alignment:
Q  1 cataagttgttttcataagttttcccaaatagtctcacaaaagttatgctactagatatgctcaaataaaccaatccaaaca 82  Q
    ||||||||||||||||||||| |  |||| | | |||||||| |||||  | ||||||  ||||||||| ||||||||||||    
T  55437146 cataagttgttttcataagttctttcaaacaatttcacaaaacttatggcagtagataaactcaaataagccaatccaaaca 55437227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 23459697 - 23459777
Alignment:
Q  1 cataagttgttttcataagttttcccaaatagtctcacaaaagttatgctactagatatgctcaaataaaccaatccaaac 81  Q
    |||||| | |||||||||||| ||| ||| ||||| || | | |||||||| |||||| |||||||||  |||||||||||    
T  23459697 cataagcttttttcataagttctccgaaacagtcttaccatacttatgctagtagataagctcaaatatgccaatccaaac 23459777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 25904223 - 25904155
Alignment:
Q  1 cataagttgttttcataagttttcccaaatagtctcacaaaagttatgctactagatatgctcaaataa 69  Q
    |||||| |||||||||||| | ||||||| |||||||||||| |||||  | | |||| ||||||||||    
T  25904223 cataagctgttttcataagctctcccaaacagtctcacaaaatttatgtcattggataagctcaaataa 25904155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 26 - 82
Target Start/End: Complemental strand, 39691124 - 39691068
Alignment:
Q  26 caaatagtctcacaaaagttatgctactagatatgctcaaataaaccaatccaaaca 82  Q
    |||| |||||||||||| |||||||| |||||| ||||||||||  |||| ||||||    
T  39691124 caaacagtctcacaaaacttatgctagtagataagctcaaataagtcaattcaaaca 39691068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 45622310 - 45622350
Alignment:
Q  1 cataagttgttttcataagttttcccaaatagtctcacaaa 41  Q
    ||||||||||||||||||||| |||| || |||||||||||    
T  45622310 cataagttgttttcataagttctcccgaacagtctcacaaa 45622350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 149 - 229
Target Start/End: Complemental strand, 50699234 - 50699154
Alignment:
Q  149 gtgtcctacaccaacacacatgattaccttcaattatgttatttttctcaaattattatcggtggcaacatgttagtgtca 229  Q
    |||||| |||||||||||  ||||||| ||||||||  | |||||| ||||||| ||| |||||  ||| |||||||||||    
T  50699234 gtgtccaacaccaacacatgtgattacattcaattaactaatttttttcaaatttttaccggtgttaacgtgttagtgtca 50699154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 46; Significance: 2e-17; HSPs: 23)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 7705998 - 7705917
Alignment:
Q  1 cataagttgttttcataagttttcccaaatagtctcacaaaagttatgctactagatatgctcaaataaaccaatccaaaca 82  Q
    |||||| |||||||||||||| ||||||| ||  |||||||| |||||||| |||||||||||||||||  |||||||||||    
T  7705998 cataagctgttttcataagttctcccaaagagcgtcacaaaacttatgctagtagatatgctcaaataagtcaatccaaaca 7705917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 16937883 - 16937802
Alignment:
Q  1 cataagttgttttcataagttttcccaaatagtctcacaaaagttatgctactagatatgctcaaataaaccaatccaaaca 82  Q
    |||||| |||||||||||||| | ||||| | |||||||||| |||||||| |||||| |||||||||| ||||||||||||    
T  16937883 cataagctgttttcataagttcttccaaacactctcacaaaacttatgctagtagataagctcaaataagccaatccaaaca 16937802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 12857338 - 12857257
Alignment:
Q  1 cataagttgttttcataagttttcccaaatagtctcacaaaagttatgctactagatatgctcaaataaaccaatccaaaca 82  Q
    ||||||||||||||||||||| |||  || ||| |||||||| ||| |  | |||||| |||||||||||||||||||||||    
T  12857338 cataagttgttttcataagttctccggaaaagtttcacaaaacttacgtcaatagataagctcaaataaaccaatccaaaca 12857257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 3520647 - 3520721
Alignment:
Q  1 cataagttgttttcataagttttcccaaatagtctcacaaaagttatgctactagatatgctcaaataaaccaat 75  Q
    |||||| |||||||||||||| ||||||| ||||||||| || |||| ||| |||||  |||||||||| |||||    
T  3520647 cataagatgttttcataagttctcccaaacagtctcacacaacttatactagtagatgagctcaaataagccaat 3520721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 12857705 - 12857624
Alignment:
Q  1 cataagttgttttcataagttttcccaaatagtctcacaaaagttatgctactagatatgctcaaataaaccaatccaaaca 82  Q
    ||||||||||||||||||||| |||  || ||| |||||||| ||| |  | |||||  |||||||||||||||||||||||    
T  12857705 cataagttgttttcataagttctccggaacagtttcacaaaacttacgtcaatagatgagctcaaataaaccaatccaaaca 12857624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 15246903 - 15246984
Alignment:
Q  1 cataagttgttttcataagttttcccaaatagtctcacaaaagttatgctactagatatgctcaaataaaccaatccaaaca 82  Q
    ||||||||| ||||||||||| ||||||| | ||| | |||| |||||  | |||||| |||||||||||| ||||||||||    
T  15246903 cataagttgctttcataagttctcccaaacattctaataaaacttatgtcagtagataagctcaaataaacaaatccaaaca 15246984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 29925911 - 29925982
Alignment:
Q  1 cataagttgttttcataagttttcccaaatagtctcacaaaagttatgctactagatatgctcaaataaacca 73  Q
    |||||| |||||||||||||| |||||||  ||||||||||| || ||||| |||||| || |||||||||||    
T  29925911 cataagctgttttcataagttctcccaaacggtctcacaaaactt-tgctagtagataagcccaaataaacca 29925982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 8 - 82
Target Start/End: Original strand, 11104981 - 11105056
Alignment:
Q  8 tgttttcataagttttcccaaatagtctcacaaaag-ttatgctactagatatgctcaaataaaccaatccaaaca 82  Q
    |||||||||||||| ||||||||||| ||||||  | |||||||  | |||| ||||||||||| |||||||||||    
T  11104981 tgttttcataagttctcccaaatagtatcacaagtgcttatgctggttgataagctcaaataaatcaatccaaaca 11105056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 11700232 - 11700315
Alignment:
Q  1 cataagttgttttcataagttttcccaaatagtctcacaaaagttatgctactagatatgctcaaataaaccaatccaaacatg 84  Q
    |||||||||||| |||||||| |   ||| |||||||||||| |||||| | | |||| |||||||||| | ||||||||||||    
T  11700232 cataagttgtttccataagttctgtgaaacagtctcacaaaacttatgccagtggataagctcaaataagcaaatccaaacatg 11700315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 8 - 42
Target Start/End: Original strand, 32009770 - 32009804
Alignment:
Q  8 tgttttcataagttttcccaaatagtctcacaaaa 42  Q
    |||||||||||||||| ||||||||||||||||||    
T  32009770 tgttttcataagtttttccaaatagtctcacaaaa 32009804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 39248168 - 39248218
Alignment:
Q  1 cataagttgttttcataagttttcccaaatagtctcacaaaagttatgcta 51  Q
    |||||| |||||| ||||||| ||||||| |||||||||||| ||||||||    
T  39248168 cataagctgtttttataagttctcccaaacagtctcacaaaacttatgcta 39248218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 8 - 58
Target Start/End: Complemental strand, 41981696 - 41981646
Alignment:
Q  8 tgttttcataagttttcccaaatagtctcacaaaagttatgctactagata 58  Q
    |||||||||||||| ||||||| |||||||||||| | |||||| ||||||    
T  41981696 tgttttcataagttctcccaaacagtctcacaaaactaatgctagtagata 41981646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 16 - 70
Target Start/End: Complemental strand, 42569597 - 42569543
Alignment:
Q  16 taagttttcccaaatagtctcacaaaagttatgctactagatatgctcaaataaa 70  Q
    |||||| || ||||||||||||||||| |||||||| ||||||  ||||||||||    
T  42569597 taagttctctcaaatagtctcacaaaacttatgctagtagatacactcaaataaa 42569543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 10640023 - 10640104
Alignment:
Q  1 cataagttgttttcataagttttcccaaatagtctcacaaaagttatgctactagatatgctcaaataaaccaatccaaaca 82  Q
    |||||| |||||||||||||| ||||||| | | |||||||| |||||  | ||||||  ||||||||| | ||||||||||    
T  10640023 cataagctgttttcataagttctcccaaacaatatcacaaaacttatgtcagtagataaactcaaataagctaatccaaaca 10640104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 16457979 - 16457938
Alignment:
Q  1 cataagttgttttcataagttttcccaaatagtctcacaaaa 42  Q
    |||||| |||||||||||||| ||||||| ||||||||||||    
T  16457979 cataagctgttttcataagttctcccaaacagtctcacaaaa 16457938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 156 - 221
Target Start/End: Original strand, 38749565 - 38749629
Alignment:
Q  156 acaccaacacacatgattaccttcaattatgttatttttctcaaattattatcggtggcaacatgt 221  Q
    ||||||||||| || ||||| || |||||||| |||||| ||||||||||||||||| | ||||||    
T  38749565 acaccaacacatataattacattgaattatgtcattttt-tcaaattattatcggtgtcgacatgt 38749629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 41419389 - 41419470
Alignment:
Q  1 cataagttgttttcataagttttcccaaatagtctcacaaaagttatgctactagatatgctcaaataaaccaatccaaaca 82  Q
    |||||| |||||||| ||||| ||||||| | |||||||||| |||||  | |||||  ||||||||||  |||||||||||    
T  41419389 cataagctgttttcacaagttatcccaaacaatctcacaaaatttatgtcagtagattagctcaaataagtcaatccaaaca 41419470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 41534508 - 41534589
Alignment:
Q  1 cataagttgttttcataagttttcccaaatagtctcacaaaagttatgctactagatatgctcaaataaaccaatccaaaca 82  Q
    |||||| |||||||| ||||| ||||||| | |||||||||| |||||  | |||||  ||||||||||  |||||||||||    
T  41534508 cataagctgttttcacaagttatcccaaacaatctcacaaaatttatgtcagtagattagctcaaataagtcaatccaaaca 41534589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 10 - 74
Target Start/End: Original strand, 15015922 - 15015986
Alignment:
Q  10 ttttcataagttttcccaaatagtctcacaaaagttatgctactagatatgctcaaataaaccaa 74  Q
    |||||||||||| ||||||| |||||||||||  |||||  | |||||| |||||||||| ||||    
T  15015922 ttttcataagttctcccaaacagtctcacaaagcttatgtcagtagataagctcaaataagccaa 15015986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 156 - 212
Target Start/End: Complemental strand, 28296385 - 28296330
Alignment:
Q  156 acaccaacacacatgattaccttcaattatgttatttttctcaaattattatcggtg 212  Q
    ||||||||||| |||| ||| || |||||||| ||||| ||||||||||||||||||    
T  28296385 acaccaacacatatgagtacattgaattatgtcatttt-ctcaaattattatcggtg 28296330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 12 - 84
Target Start/End: Complemental strand, 34736516 - 34736444
Alignment:
Q  12 ttcataagttttcccaaatagtctcacaaaagttatgctactagatatgctcaaataaaccaatccaaacatg 84  Q
    |||| ||||| |||||||  ||||||||||| |||||  || ||||| ||||||||||  |||||||||||||    
T  34736516 ttcaaaagttctcccaaactgtctcacaaaacttatgtcaccagataagctcaaataagtcaatccaaacatg 34736444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 156 - 212
Target Start/End: Complemental strand, 42621531 - 42621476
Alignment:
Q  156 acaccaacacacatgattaccttcaattatgttatttttctcaaattattatcggtg 212  Q
    |||||||||||||||||||| ||||||| |||  ||||| |||||| ||||||||||    
T  42621531 acaccaacacacatgattacattcaattttgtccttttt-tcaaataattatcggtg 42621476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 8 - 84
Target Start/End: Original strand, 43300955 - 43301031
Alignment:
Q  8 tgttttcataagttttcccaaatagtctcacaaaagttatgctactagatatgctcaaataaaccaatccaaacatg 84  Q
    |||||| |||| || |||| || ||||||| |||| |||||| | || ||| |||||||||| ||||||||||||||    
T  43300955 tgtttttataacttctccccaacagtctcataaaacttatgccattatataagctcaaataagccaatccaaacatg 43301031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 46; Significance: 2e-17; HSPs: 18)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 4606995 - 4607076
Alignment:
Q  1 cataagttgttttcataagttttcccaaatagtctcacaaaagttatgctactagatatgctcaaataaaccaatccaaaca 82  Q
    ||||||||||||||| ||||| |||||||||||||||||||| ||||  |  |||||| |||||||||| ||||||||||||    
T  4606995 cataagttgttttcacaagttctcccaaatagtctcacaaaacttatattggtagataagctcaaataagccaatccaaaca 4607076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 43036626 - 43036707
Alignment:
Q  1 cataagttgttttcataagttttcccaaatagtctcacaaaagttatgctactagatatgctcaaataaaccaatccaaaca 82  Q
    |||||| |||| ||||||||||||||||||| |||||||||| |||||  |||||||| |||||||||| ||||| ||||||    
T  43036626 cataagatgttctcataagttttcccaaatactctcacaaaacttatgtaactagataagctcaaataatccaatacaaaca 43036707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 15305744 - 15305825
Alignment:
Q  1 cataagttgttttcataagttttcccaaatagtctcacaaaagttatgctactagatatgctcaaataaaccaatccaaaca 82  Q
    ||||||||||| ||| ||||| | ||||| ||| |||||||| |||||  | |||||| |||||||||| ||||||||||||    
T  15305744 cataagttgttgtcaaaagttctaccaaacagtttcacaaaacttatgtcaatagataagctcaaataagccaatccaaaca 15305825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 9 - 82
Target Start/End: Complemental strand, 15757650 - 15757577
Alignment:
Q  9 gttttcataagttttcccaaatagtctcacaaaagttatgctactagatatgctcaaataaaccaatccaaaca 82  Q
    |||||||||| || ||||||  |||||||||||| |||||| | || ||| |||||||||||||| ||||||||    
T  15757650 gttttcataaattctcccaagcagtctcacaaaacttatgccagtaaataagctcaaataaaccattccaaaca 15757577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 27317449 - 27317530
Alignment:
Q  1 cataagttgttttcataagttttcccaaatagtctcacaaaagttatgctactagatatgctcaaataaaccaatccaaaca 82  Q
    ||||||||||||||||||||| || |||| ||||||| |||| |||||    |||||| ||||||||||  |||||||||||    
T  27317449 cataagttgttttcataagttctctcaaacagtctcataaaacttatgtcggtagataagctcaaataagtcaatccaaaca 27317530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 30331821 - 30331902
Alignment:
Q  1 cataagttgttttcataagttttcccaaatagtctcacaaaagttatgctactagatatgctcaaataaaccaatccaaaca 82  Q
    |||||| | |||||||||||| ||||||| |||||||||||| |||||  | |||||| ||| ||||||  |||||||||||    
T  30331821 cataaggttttttcataagttctcccaaacagtctcacaaaacttatgtcagtagataagctgaaataagtcaatccaaaca 30331902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 42659211 - 42659130
Alignment:
Q  1 cataagttgttttcataagttttcccaaatagtctcacaaaagttatgctactagatatgctcaaataaaccaatccaaaca 82  Q
    |||||| |||||||| || || ||||||| |||||||||||| |||||| | || ||| |||||||||| |||| |||||||    
T  42659211 cataagctgttttcaaaacttctcccaaacagtctcacaaaacttatgccagtaaataagctcaaataagccaacccaaaca 42659130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 787401 - 787483
Alignment:
Q  1 cataagttgttttcataagttttcccaaatagtctcacaaaag-ttatgctactagatatgctcaaataaaccaatccaaaca 82  Q
    |||||| |||||||||||||| || |||| ||| ||||||  | |||||| | ||||||||||| ||||| ||||||||||||    
T  787401 cataagctgttttcataagttctcacaaacagtgtcacaagtgcttatgccagtagatatgctcgaataatccaatccaaaca 787483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 119 - 153
Target Start/End: Original strand, 14762890 - 14762924
Alignment:
Q  119 gaaggcgtgtccggtgtccgacacgtatcagtgtc 153  Q
    ||||||||||| |||||||||||||||||||||||    
T  14762890 gaaggcgtgtctggtgtccgacacgtatcagtgtc 14762924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 26143640 - 26143561
Alignment:
Q  1 cataagttgttttcataagttttcccaaatagtctcacaaaagttatgctactagatatgctcaaataaaccaatccaaaca 82  Q
    |||||||||||||| |||||| ||||||| |||||  ||||| |||||  | |||||| ||||||| || ||||||||||||    
T  26143640 cataagttgttttcgtaagttctcccaaacagtct--caaaatttatgtcagtagataagctcaaacaagccaatccaaaca 26143561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 2 - 48
Target Start/End: Original strand, 36534839 - 36534885
Alignment:
Q  2 ataagttgttttcataagttttcccaaatagtctcacaaaagttatg 48  Q
    ||||| |||||||||||||| ||||||| |||||||||||| |||||    
T  36534839 ataagctgttttcataagttatcccaaacagtctcacaaaacttatg 36534885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 2 - 39
Target Start/End: Original strand, 19629431 - 19629468
Alignment:
Q  2 ataagttgttttcataagttttcccaaatagtctcaca 39  Q
    ||||||||||| |||||||| |||||||||||||||||    
T  19629431 ataagttgtttccataagttctcccaaatagtctcaca 19629468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 2 - 39
Target Start/End: Original strand, 19826332 - 19826369
Alignment:
Q  2 ataagttgttttcataagttttcccaaatagtctcaca 39  Q
    ||||||||||| |||||||| |||||||||||||||||    
T  19826332 ataagttgtttccataagttctcccaaatagtctcaca 19826369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 10 - 82
Target Start/End: Original strand, 41170688 - 41170761
Alignment:
Q  10 ttttcataagttttcccaaatagtctcacaaaag-ttatgctactagatatgctcaaataaaccaatccaaaca 82  Q
    |||||||||||| | ||||||||||||||||  | ||||| || ||||||  ||||||||| ||||||||||||    
T  41170688 ttttcataagttattccaaatagtctcacaagtgtttatgttagtagataaactcaaataagccaatccaaaca 41170761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 41293163 - 41293122
Alignment:
Q  1 cataagttgttttcataagttttcccaaatagtctcacaaaa 42  Q
    |||||| |||||| ||||||| ||||||||||||||||||||    
T  41293163 cataagctgtttttataagttctcccaaatagtctcacaaaa 41293122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 8 - 84
Target Start/End: Original strand, 20952432 - 20952508
Alignment:
Q  8 tgttttcataagttttcccaaatagtctcacaaaagttatgctactagatatgctcaaataaaccaatccaaacatg 84  Q
    |||||||||||||| ||  ||||||||| |||||| || ||| | || ||| ||||||||||  |||||||||||||    
T  20952432 tgttttcataagttctcttaaatagtctaacaaaacttttgccagtatataagctcaaataagtcaatccaaacatg 20952508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 24100998 - 24101066
Alignment:
Q  1 cataagttgttttcataagttttcccaaatagtctcacaaaagttatgctactagatatgctcaaataa 69  Q
    |||||| ||||| |||||||| ||||||| |||||||||||| ||||| || || ||| | ||||||||    
T  24100998 cataaggtgtttccataagttctcccaaacagtctcacaaaacttatgataatatataagttcaaataa 24101066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 29
Target Start/End: Complemental strand, 26857111 - 26857083
Alignment:
Q  1 cataagttgttttcataagttttcccaaa 29  Q
    |||||||||||||||||||||||||||||    
T  26857111 cataagttgttttcataagttttcccaaa 26857083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 46; Significance: 2e-17; HSPs: 28)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 2295166 - 2295247
Alignment:
Q  1 cataagttgttttcataagttttcccaaatagtctcacaaaagttatgctactagatatgctcaaataaaccaatccaaaca 82  Q
    |||||| |||||||||||||| ||||||| |||||||||||| |||||| | |||||| |||||||||| ||||| ||||||    
T  2295166 cataagctgttttcataagttctcccaaacagtctcacaaaacttatgccagtagataagctcaaataagccaattcaaaca 2295247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 3 - 82
Target Start/End: Complemental strand, 50644253 - 50644174
Alignment:
Q  3 taagttgttttcataagttttcccaaatagtctcacaaaagttatgctactagatatgctcaaataaaccaatccaaaca 82  Q
    ||||||||||||||||||| ||||||| ||||||||||||  |||| || |||||| ||||||||||  |||||||||||    
T  50644253 taagttgttttcataagttctcccaaacagtctcacaaaacatatgttagtagataagctcaaataagtcaatccaaaca 50644174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 2 - 82
Target Start/End: Complemental strand, 3234014 - 3233934
Alignment:
Q  2 ataagttgttttcataagttttcccaaatagtctcacaaaagttatgctactagatatgctcaaataaaccaatccaaaca 82  Q
    |||||||||||||||||||| |||| || |||||||||||| ||| |  |||||||| ||||||||||  |||||||||||    
T  3234014 ataagttgttttcataagttctccctaacagtctcacaaaacttacggcactagataagctcaaataagtcaatccaaaca 3233934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 42575469 - 42575389
Alignment:
Q  1 cataagttgttttcataagttttcccaaatagtctcacaaaagttatgctactagatatgctcaaataaaccaatccaaac 81  Q
    ||||||||||||| |||| ||||| |||| || ||||||||| |||||||| |||||| ||||||||||  ||||||||||    
T  42575469 cataagttgtttttataaattttctcaaacagcctcacaaaatttatgctagtagataagctcaaataaggcaatccaaac 42575389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 2777961 - 2778040
Alignment:
Q  1 cataagttgttttcataagttttcccaaatagtctcacaaaagttatgctactagatatgctcaaataaaccaatccaaa 80  Q
    ||||||||| ||||||||||| ||| ||| |||||||||||| |||||| | |||||| ||| |||||| ||||||||||    
T  2777961 cataagttggtttcataagttctcctaaacagtctcacaaaacttatgcaaatagataagctaaaataagccaatccaaa 2778040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 38247397 - 38247478
Alignment:
Q  1 cataagttgttttcataagttttcccaaatagtctcacaaaagttatgctactagatatgctcaaataaaccaatccaaaca 82  Q
    |||||| |||||||||||||| ||||||| |||  ||||||| |||||| | |||||| | |||||||| ||||||||||||    
T  38247397 cataagctgttttcataagttctcccaaacagtgacacaaaacttatgccagtagataagttcaaataacccaatccaaaca 38247478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 10 - 58
Target Start/End: Complemental strand, 38480565 - 38480517
Alignment:
Q  10 ttttcataagttttcccaaatagtctcacaaaagttatgctactagata 58  Q
    ||||||| |||| |||||||||||||||||||| |||||||||||||||    
T  38480565 ttttcattagttctcccaaatagtctcacaaaacttatgctactagata 38480517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 5720995 - 5721074
Alignment:
Q  1 cataagttgttttcataagttttcccaaatagtctcacaaaagttatgctactagatatgctcaaataaaccaatccaaa 80  Q
    |||||| |||||||||||||| ||||||| ||||  |||||| |||||| | ||| || |||||||||| ||||||||||    
T  5720995 cataagctgttttcataagttctcccaaacagtccaacaaaacttatgcaagtagttaagctcaaataagccaatccaaa 5721074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 5741676 - 5741755
Alignment:
Q  1 cataagttgttttcataagttttcccaaatagtctcacaaaagttatgctactagatatgctcaaataaaccaatccaaa 80  Q
    ||||||||||||||||||||| ||||||| |||   |||||| |||||| | ||| || |||||||||| ||||||||||    
T  5741676 cataagttgttttcataagttctcccaaacagttcaacaaaacttatgcaagtagttaagctcaaataagccaatccaaa 5741755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 13 - 82
Target Start/End: Complemental strand, 14385781 - 14385712
Alignment:
Q  13 tcataagttttcccaaatagtctcacaaaagttatgctactagatatgctcaaataaaccaatccaaaca 82  Q
    ||||||||| ||| |||||||||||| ||| |||||| | |||||| |||||||||| ||||||| ||||    
T  14385781 tcataagttctccaaaatagtctcacgaaacttatgccagtagataagctcaaataagccaatccgaaca 14385712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 14576654 - 14576573
Alignment:
Q  1 cataagttgttttcataagttttcccaaatagtctcacaaaagttatgctactagatatgctcaaataaaccaatccaaaca 82  Q
    |||||| |||||||| ||||| ||||||| |||  ||||||| ||| || | |||||| |||||||||| ||||||||||||    
T  14576654 cataagctgttttcacaagttgtcccaaacagtgccacaaaatttaagccagtagataagctcaaataagccaatccaaaca 14576573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 2 - 78
Target Start/End: Complemental strand, 14737726 - 14737649
Alignment:
Q  2 ataagttgttttcataagttttcccaaatagtctcacaaaag-ttatgctactagatatgctcaaataaaccaatcca 78  Q
    ||||||| |||||| ||||||||||||| ||||||||||  | |||| ||| || ||| |||||||||||||||||||    
T  14737726 ataagttattttcacaagttttcccaaacagtctcacaagtgcttattctagtaaataagctcaaataaaccaatcca 14737649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 4 - 69
Target Start/End: Complemental strand, 38116255 - 38116190
Alignment:
Q  4 aagttgttttcataagttttcccaaatagtctcacaaaagttatgctactagatatgctcaaataa 69  Q
    |||||||||| ||| ||| || |||||||||||||||||  ||||||| |||||| ||||||||||    
T  38116255 aagttgttttgataggttctctcaaatagtctcacaaaacctatgctagtagataagctcaaataa 38116190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 13 - 82
Target Start/End: Complemental strand, 41163038 - 41162969
Alignment:
Q  13 tcataagttttcccaaatagtctcacaaaagttatgctactagatatgctcaaataaaccaatccaaaca 82  Q
    ||||||||| ||||||| ||||||| |||| |||||| | |||||||| || |||||| |||||||||||    
T  41163038 tcataagttatcccaaacagtctcaaaaaacttatgccaatagatatgatccaataaatcaatccaaaca 41162969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 6557042 - 6557110
Alignment:
Q  1 cataagttgttttcataagttttcccaaatagtctcacaaaagttatgctactagatatgctcaaataa 69  Q
    |||||| | |||||||||||| || ||||||||||||||||| ||||| || |||||| | ||||||||    
T  6557042 cataagctattttcataagttctctcaaatagtctcacaaaacttatgttagtagataagttcaaataa 6557110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 29904821 - 29904889
Alignment:
Q  1 cataagttgttttcataagttttcccaaatagtctcacaaaagttatgctactagatatgctcaaataa 69  Q
    |||||| |||||| ||||||| || |||| |||||||||||| |||||| | |||||| ||||||||||    
T  29904821 cataagctgtttttataagttctctcaaacagtctcacaaaacttatgcaagtagataagctcaaataa 29904889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 8 - 82
Target Start/End: Original strand, 2295267 - 2295342
Alignment:
Q  8 tgttttcataagttt-tcccaaatagtctcacaaaagttatgctactagatatgctcaaataaaccaatccaaaca 82  Q
    |||||| |||||||| ||||||||||||||| |||| ||| |  | |||||| |||||||||| ||||||||||||    
T  2295267 tgttttaataagtttctcccaaatagtctcagaaaacttaagtcagtagataagctcaaataagccaatccaaaca 2295342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 38001665 - 38001712
Alignment:
Q  1 cataagttgttttcataagttttcccaaatagtctcacaaaagttatg 48  Q
    |||||| |||||||||||||| ||||||| |||||||||||| |||||    
T  38001665 cataagctgttttcataagttctcccaaacagtctcacaaaacttatg 38001712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 8 - 82
Target Start/End: Complemental strand, 34795439 - 34795365
Alignment:
Q  8 tgttttcataagttttcccaaatagtctcacaaaagttatgctactagatatgctcaaataaaccaatccaaaca 82  Q
    |||||||||||||| ||||||| |||||| ||||| |||||| | |||    |||||||||| ||||||||||||    
T  34795439 tgttttcataagttctcccaaacagtctcgcaaaatttatgccagtaggctagctcaaataacccaatccaaaca 34795365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 489260 - 489317
Alignment:
Q  1 cataagttgttttcataagttttcccaaatagtctcacaaaagttatgctactagata 58  Q
    ||||||||||||||||||||||| | ||| ||||| |||||| ||||| || ||||||    
T  489260 cataagttgttttcataagtttttctaaacagtcttacaaaaattatgttagtagata 489317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 7941676 - 7941757
Alignment:
Q  1 cataagttgttttcataagttttcccaaatagtctcacaaaagttatgctactagatatgctcaaataaaccaatccaaaca 82  Q
    |||||| ||||||||||| || | ||||| |||||||||||| | | | ||  |||||  ||||||||||||||||||||||    
T  7941676 cataagctgttttcataaattcttccaaacagtctcacaaaactcacgttagcagataaactcaaataaaccaatccaaaca 7941757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 27146255 - 27146174
Alignment:
Q  1 cataagttgttttcataagttttcccaaatagtctcacaaaagttatgctactagatatgctcaaataaaccaatccaaaca 82  Q
    |||||||||||| | |||||| | ||||  |||||||||||| |||||| | |||||| |||||||| |  |||||||||||    
T  27146255 cataagttgtttccttaagttcttccaacaagtctcacaaaacttatgccaatagataagctcaaatcagtcaatccaaaca 27146174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 17 - 82
Target Start/End: Original strand, 34952288 - 34952353
Alignment:
Q  17 aagttttcccaaatagtctcacaaaagttatgctactagatatgctcaaataaaccaatccaaaca 82  Q
    ||||| ||||||||| |||||||||  |||| | | |||||| |||||||||| ||||||||||||    
T  34952288 aagttctcccaaataatctcacaaatcttatcccaatagataagctcaaataagccaatccaaaca 34952353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 10 - 82
Target Start/End: Original strand, 473242 - 473314
Alignment:
Q  10 ttttcataagttttcccaaatagtctcacaaaagttatgctactagatatgctcaaataaaccaatccaaaca 82  Q
    |||||||||||| |||||||  || ||||| || |||||| | |||||| |||||||||| |||||| |||||    
T  473242 ttttcataagttctcccaaaatgtttcacagaacttatgccagtagataggctcaaataagccaatctaaaca 473314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 6 - 81
Target Start/End: Original strand, 6659754 - 6659830
Alignment:
Q  6 gttgttttcataagttttcccaaatagtctcacaaaag-ttatgctactagatatgctcaaataaaccaatccaaac 81  Q
    |||||| ||||||| | ||||||||||||||||||  | |||||||| |||||| ||| ||||||  ||||||||||    
T  6659754 gttgttatcataagctatcccaaatagtctcacaagtgcttatgctagtagataagctaaaataagtcaatccaaac 6659830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 156 - 212
Target Start/End: Original strand, 26777379 - 26777435
Alignment:
Q  156 acaccaacacacatgattaccttcaattatgttatttttctcaaattattatcggtg 212  Q
    ||||| |||||  ||||||| |||||||| || |||||| |||||||||||||||||    
T  26777379 acacccacacatgtgattacattcaattaagtcatttttttcaaattattatcggtg 26777435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 13 - 69
Target Start/End: Complemental strand, 33204382 - 33204326
Alignment:
Q  13 tcataagttttcccaaatagtctcacaaaagttatgctactagatatgctcaaataa 69  Q
    ||||||||| ||||||| |||||||||||| |||||  | |||||| ||||||||||    
T  33204382 tcataagttctcccaaacagtctcacaaaacttatgtcagtagataagctcaaataa 33204326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 49938817 - 49938865
Alignment:
Q  1 cataagttgttttcataagttttcccaaatagtctcacaaaagttatgc 49  Q
    |||||| |||||||||||||| ||||||| | |||||||||| ||||||    
T  49938817 cataagctgttttcataagttctcccaaacaatctcacaaaacttatgc 49938865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 45; Significance: 9e-17; HSPs: 26)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 8 - 80
Target Start/End: Complemental strand, 43717927 - 43717855
Alignment:
Q  8 tgttttcataagttttcccaaatagtctcacaaaagttatgctactagatatgctcaaataaaccaatccaaa 80  Q
    |||||||||||||| |||||||||||||||||||| |||||  | |||||| |||||||||| ||||||||||    
T  43717927 tgttttcataagttctcccaaatagtctcacaaaacttatgtcaatagataagctcaaataagccaatccaaa 43717855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 2 - 78
Target Start/End: Original strand, 28763439 - 28763515
Alignment:
Q  2 ataagttgttttcataagttttcccaaatagtctcacaaaagttatgctactagatatgctcaaataaaccaatcca 78  Q
    ||||| |||||||||||||| ||||||| |||||||||||| ||||| ||||||||| || | ||||||| ||||||    
T  28763439 ataagctgttttcataagttctcccaaacagtctcacaaaacttatgttactagataagcccgaataaactaatcca 28763515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 16162829 - 16162911
Alignment:
Q  1 cataagttgttttcataagttttcccaaatagtctcacaaaag-ttatgctactagatatgctcaaataaaccaatccaaaca 82  Q
    |||||| ||||||||||||||||| |||| ||||||||||  | |||||||| ||||||  ||||||||| ||||||||||||    
T  16162829 cataagctgttttcataagttttctcaaacagtctcacaagtgtttatgctagtagataaactcaaataagccaatccaaaca 16162911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 13 - 82
Target Start/End: Complemental strand, 9130307 - 9130238
Alignment:
Q  13 tcataagttttcccaaatagtctcacaaaagttatgctactagatatgctcaaataaaccaatccaaaca 82  Q
    ||||||| | |||||||||||||||||||| |||||| | |||||| |||||||||| | ||||||||||    
T  9130307 tcataaggtgtcccaaatagtctcacaaaacttatgccagtagataagctcaaataagctaatccaaaca 9130238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 2 - 82
Target Start/End: Complemental strand, 30251453 - 30251373
Alignment:
Q  2 ataagttgttttcataagttttcccaaatagtctcacaaaagttatgctactagatatgctcaaataaaccaatccaaaca 82  Q
    ||||| ||||||| |||||| ||||||| |||||||| ||| |||||  | |||||| |||||||||| ||||||||||||    
T  30251453 ataagctgttttcgtaagttctcccaaacagtctcacgaaacttatgtcagtagataagctcaaataagccaatccaaaca 30251373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 10 - 82
Target Start/End: Complemental strand, 35643979 - 35643907
Alignment:
Q  10 ttttcataagttttcccaaatagtctcacaaaagttatgctactagatatgctcaaataaaccaatccaaaca 82  Q
    |||||||||||| ||||||| |||||||||||| |||||| | |||||| || ||||||| ||||||| ||||    
T  35643979 ttttcataagttatcccaaacagtctcacaaaaattatgccagtagataagcccaaataagccaatcccaaca 35643907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 3 - 82
Target Start/End: Complemental strand, 43045723 - 43045644
Alignment:
Q  3 taagttgttttcataagttttcccaaatagtctcacaaaagttatgctactagatatgctcaaataaaccaatccaaaca 82  Q
    |||| |||||||||||| | ||| ||| |||||||||||  |||||||| |||||| ||| |||||| ||||||||||||    
T  43045723 taagctgttttcataagatctccaaaacagtctcacaaatcttatgctagtagataagcttaaataagccaatccaaaca 43045644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 16 - 82
Target Start/End: Complemental strand, 36963339 - 36963273
Alignment:
Q  16 taagttttcccaaatagtctcacaaaagttatgctactagatatgctcaaataaaccaatccaaaca 82  Q
    |||||| ||||||| |||||||||||| |||||| | |||||  |||||||||| ||||||||||||    
T  36963339 taagttctcccaaacagtctcacaaaacttatgccagtagattagctcaaataagccaatccaaaca 36963273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 26771335 - 26771415
Alignment:
Q  1 cataagttgttttcataagttttcccaaatagtctcacaaaagttatgctactagatatgctcaaataaaccaatccaaaca 82  Q
    |||||| |||||||||||||| ||||||| |||||||||||| ||||||   |||||| ||||| || ||||| ||||||||    
T  26771335 cataagctgttttcataagttctcccaaacagtctcacaaaacttatgcccgtagataagctcagat-aaccagtccaaaca 26771415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 156 - 228
Target Start/End: Original strand, 10002165 - 10002237
Alignment:
Q  156 acaccaacacacatgattaccttcaattatgttatttttctcaaattattatcggtggcaacatgttagtgtc 228  Q
    ||||| |||||  ||||||| || |||||||| |||||| ||||||||||||||||| |||| || |||||||    
T  10002165 acaccgacacatgtgattacattaaattatgtcatttttttcaaattattatcggtgtcaacgtgctagtgtc 10002237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 8 - 48
Target Start/End: Original strand, 27754480 - 27754520
Alignment:
Q  8 tgttttcataagttttcccaaatagtctcacaaaagttatg 48  Q
    |||||||||||||| |||||||||||||||||||| |||||    
T  27754480 tgttttcataagttctcccaaatagtctcacaaaacttatg 27754520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 35534613 - 35534545
Alignment:
Q  1 cataagttgttttcataagttttcccaaatagtctcacaaaagttatgctactagatatgctcaaataa 69  Q
    |||||| |||||||| ||||| || |||| |||||||||||| ||||| || |||||| ||||||||||    
T  35534613 cataagctgttttcacaagttctctcaaacagtctcacaaaacttatgttagtagataagctcaaataa 35534545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 2 - 82
Target Start/End: Original strand, 41589657 - 41589737
Alignment:
Q  2 ataagttgttttcataagttttcccaaatagtctcacaaaagttatgctactagatatgctcaaataaaccaatccaaaca 82  Q
    |||||||||||||||||||| ||| ||| ||||||| |||  |||||  | |||| | ||||||||||||||||| |||||    
T  41589657 ataagttgttttcataagttctccaaaacagtctcaaaaagcttatgtcagtagacaagctcaaataaaccaatctaaaca 41589737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 2 - 84
Target Start/End: Complemental strand, 2488008 - 2487925
Alignment:
Q  2 ataagttgttttcataagttttcccaaatagtctcacaaaag-ttatgctactagatatgctcaaataaaccaatccaaacatg 84  Q
    |||||||||||||||||||| ||||||| ||||||||||  | |||||  | |||||   ||||||||| ||||||||||||||    
T  2488008 ataagttgttttcataagttctcccaaacagtctcacaagtgcttatgtcagtagatgaactcaaataagccaatccaaacatg 2487925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 157 - 208
Target Start/End: Complemental strand, 3508108 - 3508058
Alignment:
Q  157 caccaacacacatgattaccttcaattatgttatttttctcaaattattatc 208  Q
    |||||||||| |||||||| || |||||||||| ||||||||||||||||||    
T  3508108 caccaacacatatgattacattgaattatgtta-ttttctcaaattattatc 3508058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 123 - 173
Target Start/End: Complemental strand, 5482001 - 5481951
Alignment:
Q  123 gcgtgtccggtgtccgacacgtatcagtgtcctacaccaacacacatgatt 173  Q
    ||||||| ||||||| ||| ||||| |||||| ||||||||||||||||||    
T  5482001 gcgtgtctggtgtccaacatgtatcggtgtccgacaccaacacacatgatt 5481951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 196 - 230
Target Start/End: Complemental strand, 13487900 - 13487866
Alignment:
Q  196 tcaaattattatcggtggcaacatgttagtgtcag 230  Q
    ||||||||||||||||| |||||||||||||||||    
T  13487900 tcaaattattatcggtgtcaacatgttagtgtcag 13487866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 2 - 84
Target Start/End: Complemental strand, 29818943 - 29818861
Alignment:
Q  2 ataagttgttttcataagttttcccaaatagtctcacaaaagttatgctactagatatgctcaaataaaccaatccaaacatg 84  Q
    ||||||||| || || | || ||| ||| |||||||||||| ||||| || |||||| |||||||||  ||||||||||||||    
T  29818943 ataagttgtgttaattaattctccgaaacagtctcacaaaacttatgatagtagataagctcaaatatgccaatccaaacatg 29818861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 13 - 78
Target Start/End: Original strand, 6525899 - 6525964
Alignment:
Q  13 tcataagttttcccaaatagtctcacaaaagttatgctactagatatgctcaaataaaccaatcca 78  Q
    ||||||||||||||||| |||| ||||||| ||||| || ||||||  |||||||||  |||||||    
T  6525899 tcataagttttcccaaacagtcacacaaaacttatgttagtagataaactcaaataagacaatcca 6525964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 32840986 - 32840945
Alignment:
Q  1 cataagttgttttcataagttttcccaaatagtctcacaaaa 42  Q
    ||||||||||||||||||||| ||||||| |||||| |||||    
T  32840986 cataagttgttttcataagttctcccaaacagtctcgcaaaa 32840945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 44792726 - 44792807
Alignment:
Q  1 cataagttgttttcataagttttcccaaatagtctcacaaaagttatgctactagatatgctcaaataaaccaatccaaaca 82  Q
    ||||||||||| |  |||||| ||| ||| ||||||||| || |||| | | |||||| |||||||||| ||||||||||||    
T  44792726 cataagttgttgttctaagttctccaaaacagtctcacataatttatcccagtagataagctcaaataagccaatccaaaca 44792807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 9 - 69
Target Start/End: Complemental strand, 1058069 - 1058009
Alignment:
Q  9 gttttcataagttttcccaaatagtctcacaaaagttatgctactagatatgctcaaataa 69  Q
    ||||||| ||||| ||||||| |||||||||||| |||||  | |||||| ||||||||||    
T  1058069 gttttcaaaagttctcccaaacagtctcacaaaacttatgtaagtagataagctcaaataa 1058009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 8 - 80
Target Start/End: Complemental strand, 12497065 - 12496993
Alignment:
Q  8 tgttttcataagttttcccaaatagtctcacaaaagttatgctactagatatgctcaaataaaccaatccaaa 80  Q
    |||||| | ||||| || |||| |||||||||||| |||||| |  ||||| ||||||||||| |||||||||    
T  12497065 tgtttttagaagttctctcaaacagtctcacaaaacttatgccaggagataagctcaaataaatcaatccaaa 12496993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 8 - 84
Target Start/End: Original strand, 12976289 - 12976365
Alignment:
Q  8 tgttttcataagttttcccaaatagtctcacaaaagttatgctactagatatgctcaaataaaccaatccaaacatg 84  Q
    |||| ||||||||| | | ||| |||||||||||  |||||||| |||||| |||||||||| |||| |||| ||||    
T  12976289 tgttctcataagttctactaaacagtctcacaaaccttatgctagtagataagctcaaataagccaaaccaagcatg 12976365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 8 - 79
Target Start/End: Complemental strand, 31884934 - 31884862
Alignment:
Q  8 tgttttcataagttttcccaaatagtctcacaaaag-ttatgctactagatatgctcaaataaaccaatccaa 79  Q
    |||||| ||||||||||||||| | ||||||||  | |||||||| |||||| ||||||||||  ||||||||    
T  31884934 tgtttttataagttttcccaaacactctcacaagtgcttatgctagtagataagctcaaataacgcaatccaa 31884862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 40859782 - 40859703
Alignment:
Q  1 cataagttgttttcataagttttcccaaatagtctcacaaaagttatgctactagatatgctcaaataaaccaatccaaac 81  Q
    |||||| ||||||||||||| | || ||| || ||||||||| ||||| ||  ||||| |||||||||| |||||||||||    
T  40859782 cataagctgttttcataagtct-ccaaaacagcctcacaaaacttatgttagcagataagctcaaataagccaatccaaac 40859703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 24)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 4970792 - 4970711
Alignment:
Q  1 cataagttgttttcataagttttcccaaatagtctcacaaaagttatgctactagatatgctcaaataaaccaatccaaaca 82  Q
    ||||||||||||||||||||| ||||||| |||||||||| | |||||  || ||||| ||||||||||  |||||||||||    
T  4970792 cataagttgttttcataagttctcccaaacagtctcacaagacttatgtcacgagataagctcaaataagtcaatccaaaca 4970711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 2 - 78
Target Start/End: Original strand, 33678851 - 33678927
Alignment:
Q  2 ataagttgttttcataagttttcccaaatagtctcacaaaagttatgctactagatatgctcaaataaaccaatcca 78  Q
    |||||||||||||||||||| |||||||| ||||||||||| |||||| | |||||| | | |||||| ||||||||    
T  33678851 ataagttgttttcataagttctcccaaattgtctcacaaaacttatgcaagtagataagtttaaataagccaatcca 33678927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 4 - 52
Target Start/End: Complemental strand, 44989674 - 44989626
Alignment:
Q  4 aagttgttttcataagttttcccaaatagtctcacaaaagttatgctac 52  Q
    |||||||||||||||||||||||||| |||||||||||| |||||||||    
T  44989674 aagttgttttcataagttttcccaaacagtctcacaaaacttatgctac 44989626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 156 - 208
Target Start/End: Original strand, 25655490 - 25655542
Alignment:
Q  156 acaccaacacacatgattaccttcaattatgttatttttctcaaattattatc 208  Q
    |||| ||||||||||||||| || ||||||||||||||| |||||||||||||    
T  25655490 acacgaacacacatgattacgtttaattatgttatttttttcaaattattatc 25655542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 13 - 80
Target Start/End: Original strand, 18765366 - 18765433
Alignment:
Q  13 tcataagttttcccaaatagtctcacaaaagttatgctactagatatgctcaaataaaccaatccaaa 80  Q
    ||||||||| ||||||| |||||||||||| |||||  | |||||| ||||||||||| |||||||||    
T  18765366 tcataagttctcccaaacagtctcacaaaacttatgtcaatagataagctcaaataaagcaatccaaa 18765433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 19302563 - 19302482
Alignment:
Q  1 cataagttgttttcataagttttcccaaatagtctcacaaaagttatgctactagatatgctcaaataaaccaatccaaaca 82  Q
    |||||| ||||||||||| || ||||||||| |||||||||| |||||  | |||||| ||||||||||  |||| ||||||    
T  19302563 cataagctgttttcataaattctcccaaatattctcacaaaacttatgtcagtagataagctcaaataagtcaattcaaaca 19302482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 8 - 69
Target Start/End: Complemental strand, 27863718 - 27863657
Alignment:
Q  8 tgttttcataagttttcccaaatagtctcacaaaagttatgctactagatatgctcaaataa 69  Q
    |||||||||||||| || ||||||||||||||||| |||||| | | |||| ||||||||||    
T  27863718 tgttttcataagttctctcaaatagtctcacaaaacttatgccagtggataagctcaaataa 27863657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 2 - 42
Target Start/End: Complemental strand, 22940055 - 22940015
Alignment:
Q  2 ataagttgttttcataagttttcccaaatagtctcacaaaa 42  Q
    |||||||||||||||||||| | ||||||||||||||||||    
T  22940055 ataagttgttttcataagttcttccaaatagtctcacaaaa 22940015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 33601410 - 33601342
Alignment:
Q  1 cataagttgttttcataagttttcccaaatagtctcacaaaagttatgctactagatatgctcaaataa 69  Q
    |||||| |||||||||||||| ||  ||| |||||||||||| |||||| | |||||| ||||||||||    
T  33601410 cataagctgttttcataagttctcgaaaagagtctcacaaaacttatgccaatagataagctcaaataa 33601342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 3928010 - 3927931
Alignment:
Q  1 cataagttgttttcataagttttcccaaatagtctcacaaaagttatgctactagatatgctcaaataaaccaatccaaa 80  Q
    ||||| ||||||| | || || || ||||||||||||||||| |||||||| ||||||  ||||||||| || |||||||    
T  3928010 cataaattgttttaaaaaattctctcaaatagtctcacaaaacttatgctagtagatagcctcaaataagccgatccaaa 3927931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 25670587 - 25670548
Alignment:
Q  1 cataagttgttttcataagttttcccaaatagtctcacaa 40  Q
    |||||||||||||||||||||||| |||| ||||||||||    
T  25670587 cataagttgttttcataagttttctcaaacagtctcacaa 25670548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 162 - 221
Target Start/End: Original strand, 38134414 - 38134472
Alignment:
Q  162 acacacatgattaccttcaattatgttatttttctcaaattattatcggtggcaacatgt 221  Q
    ||||| |||||||| || |||||||| ||||| |||||||||||||||||| ||||||||    
T  38134414 acacatatgattacattgaattatgtcatttt-ctcaaattattatcggtgtcaacatgt 38134472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 48470114 - 48470195
Alignment:
Q  1 cataagttgttttcataagttttcccaaatagtctcacaaaagttatg-ctactagatatgctcaaataaaccaatccaaaca 82  Q
    |||||| |||||||||||||| ||||||| | ||||| |||| ||||| ||| |||||| |||||||||| ||||||| ||||    
T  48470114 cataagctgttttcataagttctcccaaacaatctcataaaacttatgtcta-tagataagctcaaataagccaatcctaaca 48470195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 420430 - 420507
Alignment:
Q  1 cataagttgttttcataagttttcccaaatagtctcacaaaagttatgctactagatatgctcaaataaaccaatcca 78  Q
    ||||| ||||||||||||||| ||||||| |||||||||||  ||| || | |||| | ||||||| || ||||||||    
T  420430 cataaattgttttcataagttctcccaaacagtctcacaaagcttaagccagtagacaagctcaaagaagccaatcca 420507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 5947311 - 5947392
Alignment:
Q  1 cataagttgttttcataagttttcccaaatagtctcacaaaagttatgctactagatatgctcaaataaaccaatccaaaca 82  Q
    |||||| || ||||| ||||| | ||||| ||||||| |||| |||| | | |||||| |||||||||| ||||||||||||    
T  5947311 cataagctggtttcaaaagttcttccaaacagtctcataaaacttataccaatagataagctcaaataagccaatccaaaca 5947392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 2 - 51
Target Start/End: Complemental strand, 21568494 - 21568445
Alignment:
Q  2 ataagttgttttcataagttttcccaaatagtctcacaaaagttatgcta 51  Q
    ||||| |||||||||||||| ||||||| ||||||||||||  |||||||    
T  21568494 ataagctgttttcataagttctcccaaacagtctcacaaaatatatgcta 21568445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 6 - 83
Target Start/End: Complemental strand, 33266481 - 33266404
Alignment:
Q  6 gttgttttcataagttttcccaaatagtctcacaaaagttatgctactagatatgctcaaataaaccaatccaaacat 83  Q
    ||||||||| ||| || ||||||||||| |||||||| |||||    |||||| ||||||||||  ||||||||||||    
T  33266481 gttgttttcgtaaattctcccaaatagtttcacaaaacttatgtcggtagataagctcaaataagtcaatccaaacat 33266404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 40687547 - 40687466
Alignment:
Q  1 cataagttgttttcataagttttcccaaatagtctcacaaaagttatgctactagatatgctcaaataaaccaatccaaaca 82  Q
    |||||| | |||||||||||| || |||| |||||||||||  |||||||| || ||| ||| |||||| |||||| |||||    
T  40687547 cataagattttttcataagttctctcaaacagtctcacaaacattatgctagtatataagctaaaataagccaatcaaaaca 40687466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 164 - 208
Target Start/End: Original strand, 6807212 - 6807256
Alignment:
Q  164 acacatgattaccttcaattatgttatttttctcaaattattatc 208  Q
    |||| ||||||| ||||||||||| |||||||| |||||||||||    
T  6807212 acacgtgattacattcaattatgtcatttttcttaaattattatc 6807256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 156 - 208
Target Start/End: Original strand, 21247738 - 21247789
Alignment:
Q  156 acaccaacacacatgattaccttcaattatgttatttttctcaaattattatc 208  Q
    |||||||||||||||||||| || ||||| || | ||||||||||||||||||    
T  21247738 acaccaacacacatgattacattgaattacgtca-ttttctcaaattattatc 21247789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 23214924 - 23215008
Alignment:
Q  1 cataagttgttttcataagttttcccaaatagtctcacaaaag-ttatgctactagatatgctcaaataaaccaatccaaacatg 84  Q
    |||||||||||||||||| || || |||| ||||||| ||  | |||||||| |||||| | ||||||||  |||||||||||||    
T  23214924 cataagttgttttcataaattctctcaaacagtctcataagtgtttatgctagtagataaggtcaaataagtcaatccaaacatg 23215008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 2 - 42
Target Start/End: Original strand, 27288018 - 27288058
Alignment:
Q  2 ataagttgttttcataagttttcccaaatagtctcacaaaa 42  Q
    ||||| |||||||||||||| | ||||||||||||||||||    
T  27288018 ataagctgttttcataagttcttccaaatagtctcacaaaa 27288058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 33602027 - 33601963
Alignment:
Q  1 cataagttgttttcataagttttcccaaatagtctcacaaaagttatgctactagatatgctcaa 65  Q
    |||||| |||||||||||||||||  ||| ||||||| |||| |||||| | |||||| ||||||    
T  33602027 cataagctgttttcataagttttcgaaaagagtctcataaaacttatgccagtagataagctcaa 33601963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 48507800 - 48507847
Alignment:
Q  1 cataagttgttttcataagttttcccaaatagtctcacaaaagttatgc 49  Q
    ||||||||||||| ||||||| ||||||| |||||||||||| ||||||    
T  48507800 cataagttgtttt-ataagttatcccaaacagtctcacaaaacttatgc 48507847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 20)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 31365188 - 31365111
Alignment:
Q  1 cataagttgttttcataagttttcccaaatagtctcacaaaagttatgctactagatatgctcaaataaaccaatcca 78  Q
    |||||| || ||||||||||| ||||||| |||||||||||| |||||| | |||||| |||||||||| ||||||||    
T  31365188 cataagctgctttcataagttctcccaaacagtctcacaaaacttatgccaatagataagctcaaataagccaatcca 31365111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 39980799 - 39980880
Alignment:
Q  1 cataagttgttttcataagttttcccaaatagtctcacaaaagttatgctactagatatgctcaaataaaccaatccaaaca 82  Q
    |||||| |||||||||||||| ||  ||| |||||||||||| |||||||| |||||| ||||||| || ||||||||||||    
T  39980799 cataagctgttttcataagttctcttaaacagtctcacaaaacttatgctagtagataagctcaaacaagccaatccaaaca 39980880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 85
Target Start/End: Original strand, 20880546 - 20880630
Alignment:
Q  1 cataagttgttttcataagttttcccaaatagtctcacaaaagttatgctactagatatgctcaaataaaccaatccaaacatgt 85  Q
    |||||| |||||||||| ||| ||||||||||||| |  ||| |||||| | |||||| |||||||||| |||||||||||||||    
T  20880546 cataagctgttttcataggttctcccaaatagtctaaggaaacttatgcaagtagataagctcaaataagccaatccaaacatgt 20880630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 21367737 - 21367816
Alignment:
Q  1 cataagttgttttcataagttttcccaaatagtctcacaaaagttatgctactagatatgctcaaataaaccaatccaaa 80  Q
    |||||| |||||||||||||| ||||||| |||| ||||||| |||||||  ||||||  ||||||||| ||||||||||    
T  21367737 cataagctgttttcataagttctcccaaacagtcccacaaaacttatgctggtagataatctcaaataagccaatccaaa 21367816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 44014799 - 44014717
Alignment:
Q  1 cataagttgttttcataagttttcccaaatagtctcacaaaag-ttatgctactagatatgctcaaataaaccaatccaaaca 82  Q
    |||||| ||||||||||||||||| |||| ||||||||||  | |||||||| ||||||  ||||||||| ||||||||||||    
T  44014799 cataagctgttttcataagttttctcaaacagtctcacaagtgtttatgctagtagataaactcaaataagccaatccaaaca 44014717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 169 - 230
Target Start/End: Complemental strand, 28590917 - 28590857
Alignment:
Q  169 tgattaccttcaattatgttatttttctcaaattattatcggtggcaacatgttagtgtcag 230  Q
    ||||||| ||||| | ||||||||| |||||||||||||||||| |||||||||||||||||    
T  28590917 tgattacattcaactttgttatttt-ctcaaattattatcggtgtcaacatgttagtgtcag 28590857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 8 - 80
Target Start/End: Complemental strand, 18405824 - 18405752
Alignment:
Q  8 tgttttcataagttttcccaaatagtctcacaaaagttatgctactagatatgctcaaataaaccaatccaaa 80  Q
    |||||||||||||| |  |||| |||||||||||| |||||  | |||||| |||||||||||||||||||||    
T  18405824 tgttttcataagttcttgcaaacagtctcacaaaacttatgtcagtagataagctcaaataaaccaatccaaa 18405752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 24085338 - 24085258
Alignment:
Q  1 cataagttgttttcataagttttcccaaatagtctcacaaaagttatgctactagatatgctcaaataaaccaatccaaac 81  Q
    |||||| |||||||||||||| ||| ||  |||||||||||| ||||||   |||||| |||||||||| |||||||||||    
T  24085338 cataagctgttttcataagttctccaaaccagtctcacaaaacttatgccggtagataagctcaaataagccaatccaaac 24085258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 46778191 - 46778123
Alignment:
Q  1 cataagttgttttcataagttttcccaaatagtctcacaaaagttatgctactagatatgctcaaataa 69  Q
    ||||||||||||||||||||| |||||||  || |||||||| |||||| |||| ||| ||||||||||    
T  46778191 cataagttgttttcataagttctcccaaacggtttcacaaaatttatgccactaaataagctcaaataa 46778123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 3 - 81
Target Start/End: Original strand, 584118 - 584196
Alignment:
Q  3 taagttgttttcataagttttcccaaatagtctcacaaaagttatgctactagatatgctcaaataaaccaatccaaac 81  Q
    |||| ||||||||||| || ||| ||| ||||||||| || |||||||| |||||| ||||||||||  ||||||||||    
T  584118 taagctgttttcataaattctccaaaacagtctcacagaacttatgctagtagataagctcaaataagtcaatccaaac 584196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 8 - 82
Target Start/End: Original strand, 902001 - 902074
Alignment:
Q  8 tgttttcataagttttcccaaatagtctcacaaaagttatgctactagatatgctcaaataaaccaatccaaaca 82  Q
    |||||||||||||||||||||| || | | ||||| || ||| |||||||| ||||||||||| |||||||||||    
T  902001 tgttttcataagttttcccaaacagccacgcaaaacttctgc-actagataagctcaaataaagcaatccaaaca 902074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 37389253 - 37389300
Alignment:
Q  1 cataagttgttttcataagttttcccaaatagtctcacaaaagttatg 48  Q
    ||||||||||||||||||||| |||| || |||||||||||| |||||    
T  37389253 cataagttgttttcataagttctcccgaagagtctcacaaaacttatg 37389300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 46886692 - 46886614
Alignment:
Q  1 cataagttgttttcataagttttcccaaatagtctcacaaaagttatgctactagatatgctcaaataaaccaatccaa 79  Q
    |||||| ||||||||| || |  |||||| |||||| ||||| |||||| |  ||||| ||||||||||||||||||||    
T  46886692 cataagctgttttcatcagctcacccaaacagtctctcaaaatttatgccagcagataagctcaaataaaccaatccaa 46886614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 24684822 - 24684741
Alignment:
Q  1 cataagttgttttcataagttttcccaaatagtctcacaaaagttatgctactagatatgctcaaataaaccaatccaaaca 82  Q
    |||||||||||||||||||||   |||||  |||||| |||| |||||| | |||||| ||||||||||   ||||||||||    
T  24684822 cataagttgttttcataagttcaaccaaaatgtctcaaaaaacttatgccagtagataagctcaaataagttaatccaaaca 24684741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 2 - 39
Target Start/End: Complemental strand, 45535220 - 45535183
Alignment:
Q  2 ataagttgttttcataagttttcccaaatagtctcaca 39  Q
    ||||||||||| |||||||| |||||||||||||||||    
T  45535220 ataagttgtttccataagttctcccaaatagtctcaca 45535183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 10 - 82
Target Start/End: Original strand, 47132397 - 47132467
Alignment:
Q  10 ttttcataagttttcccaaatagtctcacaaaagttatgctactagatatgctcaaataaaccaatccaaaca 82  Q
    |||||||||||| ||| ||| |||||||||||| ||  || | |||||| |||||||||| ||||||||||||    
T  47132397 ttttcataagttctccaaaacagtctcacaaaactt--gccagtagataagctcaaataagccaatccaaaca 47132467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 26 - 82
Target Start/End: Complemental strand, 20170689 - 20170633
Alignment:
Q  26 caaatagtctcacaaaagttatgctactagatatgctcaaataaaccaatccaaaca 82  Q
    |||| |||||||| ||| |||||  |||||||| |||||||||| ||||||||||||    
T  20170689 caaacagtctcactaaacttatgtcactagataagctcaaataagccaatccaaaca 20170633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 163 - 223
Target Start/End: Original strand, 23623059 - 23623118
Alignment:
Q  163 cacacatgattaccttcaattatgttatttttctcaaattattatcggtggcaacatgtta 223  Q
    ||||| |||| || |||||||| ||||||||| ||||||||||||||||| |||| |||||    
T  23623059 cacacgtgataacattcaattacgttattttt-tcaaattattatcggtgtcaacgtgtta 23623118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 156 - 208
Target Start/End: Original strand, 27513664 - 27513716
Alignment:
Q  156 acaccaacacacatgattaccttcaattatgttatttttctcaaattattatc 208  Q
    ||||| ||||| |||||||| || ||| |||| ||||||||||||||||||||    
T  27513664 acaccgacacatatgattacattgaataatgtcatttttctcaaattattatc 27513716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 8 - 84
Target Start/End: Original strand, 43046742 - 43046817
Alignment:
Q  8 tgttttcataagttttcccaaatagtctcacaaaagttatgctactagatatgctcaaataaaccaatccaaacatg 84  Q
    |||||||||||||| ||||||| ||||||||||||  |||| || |||||| | ||||||||  ||||| |||||||    
T  43046742 tgttttcataagttctcccaaacagtctcacaaaacatatg-taatagataagttcaaataagtcaatctaaacatg 43046817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 16)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 9559539 - 9559460
Alignment:
Q  1 cataagttgttttcataagttttcccaaatagtctcacaaaagttatgctactagatatgctcaaataaaccaatccaaaca 82  Q
    ||||||||||||||||||||| |||||||||||||  ||||| |||||| | |||||| || ||| ||| ||||||||||||    
T  9559539 cataagttgttttcataagttctcccaaatagtct--caaaatttatgccaatagataagcgcaactaagccaatccaaaca 9559460  T

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Target: chr6; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 2 - 75
Target Start/End: Original strand, 2455330 - 2455403
Alignment:
Q  2 ataagttgttttcataagttttcccaaatagtctcacaaaagttatgctactagatatgctcaaataaaccaat 75  Q
    |||||||||||||||||||| || |||||||| |||| ||| ||||| |  |||||| ||||||||||||||||    
T  2455330 ataagttgttttcataagttctctcaaatagtttcaccaaacttatgtttgtagataagctcaaataaaccaat 2455403  T

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Target: chr6; HSP #3
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 4163223 - 4163306
Alignment:
Q  1 cataagttgttttcataagttttcccaaatagtctcacaaaagttatgctactagatatgctcaaataaaccaatccaaacatg 84  Q
    ||||||||||||||||| ||| || | || ||||||  |||| |||||| | |||||| |||||||||| ||||||||||||||    
T  4163223 cataagttgttttcataggttctcacgaacagtctcgtaaaacttatgccagtagataagctcaaataagccaatccaaacatg 4163306  T

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Target: chr6; HSP #4
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 4224844 - 4224927
Alignment:
Q  1 cataagttgttttcataagttttcccaaatagtctcacaaaagttatgctactagatatgctcaaataaaccaatccaaacatg 84  Q
    ||||||||||||||||| ||| || | || ||||||  |||| |||||| | |||||| |||||||||| ||||||||||||||    
T  4224844 cataagttgttttcataggttctcacgaacagtctcgtaaaacttatgccagtagataagctcaaataagccaatccaaacatg 4224927  T

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Target: chr6; HSP #5
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 4 - 83
Target Start/End: Complemental strand, 10645382 - 10645303
Alignment:
Q  4 aagttgttttcataagttttcccaaatagtctcacaaaagttatgctactagatatgctcaaataaaccaatccaaacat 83  Q
    |||||||||||||||||| ||||||| ||||| |||||| |||||  | ||||||  ||||||| | |||||||||||||    
T  10645382 aagttgttttcataagttctcccaaacagtcttacaaaacttatgtcattagataacctcaaattagccaatccaaacat 10645303  T

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Target: chr6; HSP #6
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 20368181 - 20368134
Alignment:
Q  1 cataagttgttttcataagttttcccaaatagtctcacaaaagttatg 48  Q
    ||||||||||||||||||||| ||||||||||||| |||||| |||||    
T  20368181 cataagttgttttcataagttctcccaaatagtcttacaaaacttatg 20368134  T

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Target: chr6; HSP #7
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 9 - 75
Target Start/End: Original strand, 2455066 - 2455132
Alignment:
Q  9 gttttcataagttttcccaaatagtctcacaaaagttatgctactagatatgctcaaataaaccaat 75  Q
    ||||||| ||||| ||||||| |||||||||||| ||||| || |||||| | ||||||||||||||    
T  2455066 gttttcagaagttctcccaaacagtctcacaaaacttatgttagtagataagttcaaataaaccaat 2455132  T

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Target: chr6; HSP #8
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 9 - 82
Target Start/End: Original strand, 848067 - 848139
Alignment:
Q  9 gttttcataagttttcccaaatagtctcacaaaagttatgctactagatatgctcaaataaaccaatccaaaca 82  Q
    ||||| ||||||| | ||||| |||||||||||| |||||||| |||||| ||||||||||  |||||||||||    
T  848067 gtttttataagttcttccaaacagtctcacaaaacttatgcta-tagataagctcaaataaggcaatccaaaca 848139  T

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Target: chr6; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 147 - 207
Target Start/End: Original strand, 28486788 - 28486848
Alignment:
Q  147 cagtgtcctacaccaacacacatgattaccttcaattatgttatttttctcaaattattat 207  Q
    |||||||| |||||||||||  |||| || |||||||||||||||||| |||||| |||||    
T  28486788 cagtgtccaacaccaacacatttgatcacattcaattatgttatttttttcaaataattat 28486848  T

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Target: chr6; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 147 - 207
Target Start/End: Original strand, 29799201 - 29799261
Alignment:
Q  147 cagtgtcctacaccaacacacatgattaccttcaattatgttatttttctcaaattattat 207  Q
    |||||||| |||||||||||  |||| || |||||||||||||||||| |||||| |||||    
T  29799201 cagtgtccaacaccaacacatttgatcacattcaattatgttatttttttcaaataattat 29799261  T

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Target: chr6; HSP #11
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 10 - 49
Target Start/End: Original strand, 31813240 - 31813279
Alignment:
Q  10 ttttcataagttttcccaaatagtctcacaaaagttatgc 49  Q
    |||||||||||| |||||||||||||||||||| ||||||    
T  31813240 ttttcataagttctcccaaatagtctcacaaaacttatgc 31813279  T

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Target: chr6; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 24626357 - 24626441
Alignment:
Q  1 cataagttgttttcataagttttcccaaatagtctcacaaaagttatgctactagatatgctca---aataaaccaatccaaaca 82  Q
    |||||| |||||||| ||||||||||||| | |||||||||  | ||| ||||||||| |||||   ||||| ||||||||||||    
T  24626357 cataagctgttttcaaaagttttcccaaacattctcacaaagctgatgttactagataagctcaattaataatccaatccaaaca 24626441  T

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Target: chr6; HSP #13
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 34430785 - 34430865
Alignment:
Q  1 cataagttgttttcataagttttcccaaatagtctcacaaaagttatgctactagatatgctcaaataaaccaatccaaaca 82  Q
    |||||||||||||||||| || ||||||| | ||| |||||| |||| | | | |||| |||||||||| ||||||||||||    
T  34430785 cataagttgttttcataaattatcccaaacaatcttacaaaacttattc-agttgataagctcaaataagccaatccaaaca 34430865  T

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Target: chr6; HSP #14
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 26559240 - 26559200
Alignment:
Q  1 cataagttgttttcataagttttcccaaatagtctcacaaa 41  Q
    ||||||||||||||||||||| | ||||| |||||||||||    
T  26559240 cataagttgttttcataagttcttccaaacagtctcacaaa 26559200  T

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Target: chr6; HSP #15
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 2 - 69
Target Start/End: Original strand, 27897161 - 27897229
Alignment:
Q  2 ataagttgttttcataagttttcccaaatagtctcacaaaag-ttatgctactagatatgctcaaataa 69  Q
    |||||||||||||| ||| |||||| |||||||||| ||  | |||||| |||||||| ||||||||||    
T  27897161 ataagttgttttcacaagctttccctaatagtctcataagcgtttatgccactagataagctcaaataa 27897229  T

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Target: chr6; HSP #16
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 29
Target Start/End: Complemental strand, 34633124 - 34633096
Alignment:
Q  1 cataagttgttttcataagttttcccaaa 29  Q
    |||||||||||||||||||||||||||||    
T  34633124 cataagttgttttcataagttttcccaaa 34633096  T

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Target: scaffold0057 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 24691 - 24760
Alignment:
Q  1 cataagttgttttcataagttttcccaaatagtctcacaaaagttatgctactagatatgctcaaataaa 70  Q
    |||||| |||||| ||||||| ||||||| ||||||||||||  ||||| | |||||| |||||||||||    
T  24691 cataagctgttttgataagttctcccaaacagtctcacaaaacatatgccaatagatacgctcaaataaa 24760  T

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Target: scaffold0022 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 156 - 221
Target Start/End: Complemental strand, 99950 - 99886
Alignment:
Q  156 acaccaacacacatgattaccttcaattatgttatttttctcaaattattatcggtggcaacatgt 221  Q
    ||||||||||| || ||||| || |||||||||| |||||| ||||||||||||||| | ||||||    
T  99950 acaccaacacatataattacattgaattatgtta-ttttctaaaattattatcggtgtcgacatgt 99886  T

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