View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF3296_high_71 (Length: 240)
Name: NF3296_high_71
Description: NF3296
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3296_high_71 |
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Alignment Details
Target: chr4 (Bit Score: 193; Significance: 1e-105; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 193; E-Value: 1e-105
Query Start/End: Original strand, 19 - 239
Target Start/End: Original strand, 45471985 - 45472204
Alignment:
| Q |
19 |
ggaataaattcgaattcatcctaggaatcgtagtttatttaagagtggttgttggggtgaactggtaggtgatgatggtatgaattgtgagctcatagaa |
118 |
Q |
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| T |
45471985 |
ggaataaattcgatatcatcctaggaatggtagtttatttaagagtggttgttggggtgaactggtaggtgatgatggtatgaattgtgagctcatagaa |
45472084 |
T |
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| Q |
119 |
aaatggtaggtatgaattgtggagtacaacaacctgataaaatccagttgggtttgcaatactcgcatgtagccgtggcctcatagaattcgaattcttt |
218 |
Q |
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| T |
45472085 |
aaatggtaggtatgaattgt-gagtacaacaacctgataaaatccagcggggtttgcaatactcgcatgtagccgtggcctcatagaattcgaattcttt |
45472183 |
T |
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| Q |
219 |
cattctcggatgagtactacg |
239 |
Q |
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||||||||||||||||||||| |
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| T |
45472184 |
cattctcggatgagtactacg |
45472204 |
T |
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