View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF3296_high_88 (Length: 207)

Name: NF3296_high_88
Description: NF3296
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF3296_high_88
NF3296_high_88
[»] chr6 (27 HSPs)
chr6 (1-207)||(34540779-34540985)
chr6 (1-137)||(9815662-9815797)
chr6 (1-135)||(12174324-12174458)
chr6 (1-115)||(34573197-34573313)
chr6 (1-140)||(31787819-31787958)
chr6 (26-163)||(31153600-31153737)
chr6 (1-125)||(35121948-35122076)
chr6 (57-138)||(33344881-33344962)
chr6 (32-131)||(21954477-21954576)
chr6 (1-79)||(34969400-34969478)
chr6 (160-207)||(11975714-11975761)
chr6 (7-109)||(19638517-19638618)
chr6 (1-160)||(33607024-33607186)
chr6 (57-138)||(34329811-34329892)
chr6 (160-207)||(439795-439842)
chr6 (1-139)||(13229311-13229441)
chr6 (160-207)||(31722251-31722298)
chr6 (169-207)||(304508-304546)
chr6 (1-138)||(10668869-10669003)
chr6 (1-74)||(3359552-3359625)
chr6 (95-144)||(11274650-11274699)
chr6 (160-205)||(31272020-31272065)
chr6 (160-205)||(31319284-31319329)
chr6 (160-207)||(16396063-16396110)
chr6 (48-140)||(6549690-6549783)
chr6 (1-41)||(4337976-4338016)
chr6 (66-158)||(5608081-5608172)
[»] chr4 (49 HSPs)
chr4 (1-126)||(23870051-23870176)
chr4 (1-158)||(2113843-2114000)
chr4 (9-138)||(3643133-3643262)
chr4 (1-126)||(36071557-36071682)
chr4 (5-157)||(15986839-15986991)
chr4 (2-125)||(7853300-7853423)
chr4 (1-127)||(29118475-29118602)
chr4 (8-138)||(12320415-12320545)
chr4 (1-138)||(4596447-4596584)
chr4 (1-144)||(7102147-7102289)
chr4 (3-126)||(43515857-43515980)
chr4 (1-138)||(5627500-5627632)
chr4 (36-157)||(20811476-20811597)
chr4 (1-154)||(25779614-25779767)
chr4 (159-207)||(5419591-5419639)
chr4 (48-128)||(8240881-8240961)
chr4 (31-157)||(29369858-29369992)
chr4 (160-207)||(16024608-16024655)
chr4 (17-159)||(37226260-37226396)
chr4 (160-207)||(49375058-49375105)
chr4 (1-157)||(53178753-53178907)
chr4 (58-138)||(40807834-40807914)
chr4 (160-207)||(2013077-2013124)
chr4 (98-157)||(48653769-48653828)
chr4 (1-72)||(55147880-55147951)
chr4 (160-207)||(56463017-56463064)
chr4 (160-205)||(167857-167902)
chr4 (170-207)||(52416280-52416317)
chr4 (160-207)||(35159462-35159509)
chr4 (160-207)||(38217632-38217679)
chr4 (160-207)||(40728771-40728818)
chr4 (160-207)||(45229811-45229858)
chr4 (160-207)||(45462930-45462977)
chr4 (160-207)||(55137389-55137436)
chr4 (169-207)||(9035447-9035485)
chr4 (169-207)||(30004308-30004346)
chr4 (161-207)||(38550621-38550667)
chr4 (161-207)||(45925334-45925380)
chr4 (48-110)||(46443804-46443866)
chr4 (169-207)||(51539365-51539403)
chr4 (3-138)||(1749999-1750133)
chr4 (168-205)||(6964224-6964261)
chr4 (19-72)||(40807924-40807977)
chr4 (160-205)||(43841386-43841431)
chr4 (48-127)||(7540403-7540483)
chr4 (171-207)||(31093852-31093888)
chr4 (169-205)||(33281837-33281873)
chr4 (1-41)||(38087663-38087703)
chr4 (32-64)||(50521298-50521330)
[»] chr7 (34 HSPs)
chr7 (1-158)||(26914311-26914468)
chr7 (1-137)||(35812618-35812755)
chr7 (1-158)||(33480459-33480615)
chr7 (9-157)||(42335914-42336062)
chr7 (36-138)||(3351119-3351221)
chr7 (1-134)||(13431656-13431789)
chr7 (1-138)||(3940640-3940776)
chr7 (4-138)||(12177813-12177948)
chr7 (1-138)||(21828165-21828301)
chr7 (1-121)||(9429342-9429461)
chr7 (15-110)||(26912345-26912440)
chr7 (1-127)||(22318663-22318788)
chr7 (2-128)||(21129325-21129451)
chr7 (57-158)||(1694007-1694109)
chr7 (53-127)||(15133306-15133380)
chr7 (1-59)||(21292797-21292855)
chr7 (16-134)||(26448387-26448509)
chr7 (169-206)||(35795208-35795245)
chr7 (2-134)||(40351759-40351892)
chr7 (46-126)||(30095739-30095819)
chr7 (160-207)||(33951677-33951724)
chr7 (160-207)||(46255599-46255646)
chr7 (161-207)||(25528456-25528502)
chr7 (169-207)||(36311446-36311484)
chr7 (36-159)||(48393247-48393372)
chr7 (160-205)||(8166490-8166535)
chr7 (1-77)||(32982339-32982415)
chr7 (1-33)||(37996513-37996545)
chr7 (69-144)||(36066184-36066258)
chr7 (159-201)||(14816009-14816051)
chr7 (159-201)||(15263004-15263046)
chr7 (48-125)||(31329559-31329637)
chr7 (161-207)||(43458888-43458934)
chr7 (1-41)||(30095845-30095885)
[»] chr8 (36 HSPs)
chr8 (1-133)||(13580351-13580483)
chr8 (1-122)||(22930325-22930446)
chr8 (3-100)||(34142030-34142127)
chr8 (1-131)||(26835589-26835719)
chr8 (55-149)||(36042843-36042936)
chr8 (29-138)||(13236214-13236323)
chr8 (18-138)||(35480990-35481111)
chr8 (1-64)||(28376661-28376724)
chr8 (58-157)||(41849442-41849540)
chr8 (34-138)||(43872544-43872648)
chr8 (1-158)||(4350632-4350796)
chr8 (1-134)||(40620633-40620765)
chr8 (1-125)||(22486596-22486720)
chr8 (1-134)||(9191204-9191331)
chr8 (1-134)||(12181827-12181956)
chr8 (1-134)||(12426255-12426384)
chr8 (36-123)||(28310231-28310317)
chr8 (57-131)||(21347499-21347573)
chr8 (48-158)||(39295474-39295583)
chr8 (69-158)||(9052948-9053037)
chr8 (160-207)||(8239335-8239382)
chr8 (48-138)||(31277939-31278030)
chr8 (160-207)||(31700376-31700423)
chr8 (160-207)||(39259650-39259697)
chr8 (160-207)||(40104597-40104644)
chr8 (169-207)||(11076937-11076975)
chr8 (161-207)||(23143475-23143521)
chr8 (161-207)||(28249487-28249533)
chr8 (1-130)||(31383478-31383607)
chr8 (1-42)||(43872482-43872523)
chr8 (31-126)||(17786508-17786603)
chr8 (161-207)||(13545602-13545648)
chr8 (161-207)||(13678825-13678871)
chr8 (161-207)||(20092620-20092666)
chr8 (7-85)||(32036759-32036837)
chr8 (161-207)||(43097874-43097920)
[»] scaffold0777 (1 HSPs)
scaffold0777 (1-158)||(5850-6006)
[»] chr5 (35 HSPs)
chr5 (1-158)||(3193490-3193647)
chr5 (1-159)||(502809-502960)
chr5 (4-134)||(32257677-32257807)
chr5 (1-134)||(12263638-12263773)
chr5 (1-134)||(20870638-20870767)
chr5 (1-144)||(16569284-16569425)
chr5 (1-127)||(16570495-16570621)
chr5 (1-138)||(25034341-25034477)
chr5 (26-134)||(18626687-18626795)
chr5 (55-134)||(37147848-37147927)
chr5 (161-207)||(9714646-9714692)
chr5 (1-158)||(39542414-39542569)
chr5 (1-85)||(3596953-3597037)
chr5 (1-134)||(36161048-36161177)
chr5 (36-126)||(7886612-7886702)
chr5 (1-46)||(7887267-7887312)
chr5 (160-207)||(8298598-8298645)
chr5 (160-207)||(8735437-8735484)
chr5 (160-207)||(18809713-18809760)
chr5 (160-207)||(20336840-20336887)
chr5 (160-207)||(38678811-38678858)
chr5 (169-207)||(12724431-12724469)
chr5 (169-207)||(12785914-12785952)
chr5 (169-207)||(16512938-16512976)
chr5 (161-207)||(25976484-25976530)
chr5 (161-207)||(26279799-26279845)
chr5 (160-205)||(37013538-37013583)
chr5 (160-207)||(3557365-3557412)
chr5 (169-207)||(13821434-13821472)
chr5 (98-156)||(18600482-18600540)
chr5 (160-205)||(17504392-17504437)
chr5 (159-207)||(8198123-8198171)
chr5 (46-126)||(10325603-10325683)
chr5 (1-41)||(10325717-10325757)
chr5 (161-205)||(37884185-37884229)
[»] chr3 (26 HSPs)
chr3 (1-134)||(15670922-15671055)
chr3 (1-127)||(33510096-33510222)
chr3 (1-115)||(2758079-2758193)
chr3 (32-134)||(27538777-27538879)
chr3 (8-158)||(33682630-33682780)
chr3 (9-138)||(168674-168801)
chr3 (48-158)||(47000834-47000943)
chr3 (57-138)||(11365107-11365188)
chr3 (8-131)||(39838478-39838600)
chr3 (1-158)||(8266562-8266720)
chr3 (1-127)||(11383595-11383723)
chr3 (1-116)||(54417032-54417147)
chr3 (48-126)||(46743998-46744076)
chr3 (159-207)||(228119-228167)
chr3 (1-43)||(42417930-42417972)
chr3 (162-207)||(32530551-32530596)
chr3 (5-84)||(19149892-19149971)
chr3 (160-207)||(53816677-53816724)
chr3 (160-207)||(26501546-26501593)
chr3 (160-207)||(31764544-31764591)
chr3 (160-207)||(36402170-36402217)
chr3 (160-207)||(47013110-47013157)
chr3 (161-207)||(49165451-49165497)
chr3 (162-207)||(6937170-6937215)
chr3 (29-85)||(7741730-7741786)
chr3 (161-205)||(39353873-39353917)
[»] chr1 (40 HSPs)
chr1 (1-138)||(1240431-1240572)
chr1 (1-157)||(3265435-3265590)
chr1 (1-85)||(8246761-8246845)
chr1 (29-138)||(35405368-35405477)
chr1 (26-134)||(15103039-15103147)
chr1 (57-133)||(4626523-4626600)
chr1 (1-64)||(29664195-29664258)
chr1 (1-138)||(1153713-1153849)
chr1 (1-126)||(33735750-33735875)
chr1 (57-138)||(49762438-49762519)
chr1 (60-163)||(22667158-22667261)
chr1 (48-158)||(38742445-38742555)
chr1 (5-126)||(34298952-34299076)
chr1 (159-207)||(37952953-37953001)
chr1 (160-207)||(3516941-3516988)
chr1 (91-157)||(30718175-30718241)
chr1 (160-207)||(42881958-42882005)
chr1 (160-207)||(48963682-48963729)
chr1 (169-207)||(12699900-12699938)
chr1 (36-126)||(23897902-23897991)
chr1 (160-202)||(27217564-27217606)
chr1 (1-43)||(30717894-30717936)
chr1 (1-157)||(35204188-35204340)
chr1 (1-138)||(45385222-45385361)
chr1 (60-140)||(29062352-29062432)
chr1 (159-207)||(33802072-33802120)
chr1 (160-207)||(22859413-22859460)
chr1 (160-207)||(23983369-23983416)
chr1 (160-207)||(41724221-41724268)
chr1 (95-157)||(36382976-36383038)
chr1 (161-207)||(38861435-38861481)
chr1 (161-207)||(41087160-41087206)
chr1 (161-207)||(41091928-41091974)
chr1 (161-207)||(41899634-41899680)
chr1 (169-207)||(44497235-44497273)
chr1 (169-207)||(44754755-44754793)
chr1 (1-34)||(40859-40892)
chr1 (56-157)||(29868761-29868862)
chr1 (2-126)||(16141517-16141640)
chr1 (161-205)||(50261324-50261368)
[»] chr2 (32 HSPs)
chr2 (1-115)||(40876936-40877050)
chr2 (1-138)||(5163796-5163933)
chr2 (1-133)||(30257773-30257906)
chr2 (1-138)||(38561846-38561982)
chr2 (1-126)||(18829973-18830099)
chr2 (32-163)||(16646922-16647053)
chr2 (1-99)||(28556632-28556730)
chr2 (57-158)||(44157275-44157375)
chr2 (36-130)||(32415357-32415449)
chr2 (69-160)||(38608312-38608403)
chr2 (36-158)||(36186578-36186700)
chr2 (29-138)||(34345961-34346068)
chr2 (4-138)||(35280919-35281055)
chr2 (8-144)||(38134084-38134217)
chr2 (29-126)||(45443645-45443747)
chr2 (160-207)||(15912453-15912500)
chr2 (4-79)||(36506919-36506994)
chr2 (91-158)||(40705889-40705956)
chr2 (160-207)||(45234968-45235015)
chr2 (161-207)||(7940891-7940937)
chr2 (169-207)||(17137050-17137088)
chr2 (50-128)||(26350439-26350516)
chr2 (161-207)||(31993426-31993472)
chr2 (57-134)||(4206331-4206408)
chr2 (1-102)||(28148893-28148993)
chr2 (82-159)||(32596746-32596823)
chr2 (1-85)||(18197342-18197425)
chr2 (160-207)||(6404857-6404904)
chr2 (36-123)||(37912332-37912419)
chr2 (48-138)||(2887013-2887103)
chr2 (1-39)||(28226833-28226871)
chr2 (160-205)||(38702935-38702980)
[»] scaffold0531 (1 HSPs)
scaffold0531 (1-138)||(9705-9841)
[»] scaffold0121 (1 HSPs)
scaffold0121 (160-207)||(46778-46825)
[»] scaffold0527 (2 HSPs)
scaffold0527 (69-157)||(1717-1805)
scaffold0527 (69-157)||(9780-9868)


Alignment Details
Target: chr6 (Bit Score: 167; Significance: 1e-89; HSPs: 27)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 167; E-Value: 1e-89
Query Start/End: Original strand, 1 - 207
Target Start/End: Complemental strand, 34540985 - 34540779
Alignment:
Q  1 attattatttttacttagtagttaatactatatagatatatttcttattaactcgttttgattacttctattgaaaatatattttcaaataaccttgatt 100  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||| |||||||    
T  34540985 attattatttttacttagtaattaatactatatagatatatttcttattaactcgttttgattagttctattgaaaatatatttttaaataatcttgatt 34540886  T
Q  101 atgaatgaattttttgcaacaaaaaatacaagaagaaatacattcaaatgattaaaagagtatgtcatatcacatactagtggttaggctcttaggagat 200  Q
    |||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||| ||||||||| ||||| ||||||    
T  34540885 atgaataaattttttgcaacaaaaaatacatgaagaaatacattcaaatgattaaaagggtatgtcatatcacataccagtggttagactcttgggagat 34540786  T
Q  201 tagaatt 207  Q
    |||||||    
T  34540785 tagaatt 34540779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 1 - 137
Target Start/End: Complemental strand, 9815797 - 9815662
Alignment:
Q  1 attattatttttacttagtagttaatactatatagatatatttcttattaactcgttttgattacttctattgaaaatatattttcaaataaccttgatt 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||| ||| ||||||||  | ||||||||||||||||| | | |||  |||||    
T  9815797 attattatttttacttagtagttaatactatatagatatatttctttttaattcgctttgattaactttattgaaaatatatttttagaaaactatgatt 9815698  T
Q  101 atgaatgaattttttgcaacaaaaaatacaagaagaa 137  Q
    || |||| | |||||| |||||||||| |||||||||    
T  9815697 ataaatg-agtttttgtaacaaaaaatgcaagaagaa 9815662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 1 - 135
Target Start/End: Original strand, 12174324 - 12174458
Alignment:
Q  1 attattatttttacttagtagttaatactatatagatatatttcttattaactcgttttgattacttctattgaaaatatattttcaaataaccttgatt 100  Q
    |||||||||||||||||||||||| ||||||||||||||||||||| |||| |||||||||||| || |||| |||||||||||| | | ||| || |||    
T  12174324 attattatttttacttagtagttagtactatatagatatatttctttttaattcgttttgattaattatattaaaaatatatttttagagaactttaatt 12174423  T
Q  101 atgaatgaattttttgcaacaaaaaatacaagaag 135  Q
     | ||||||| ||||| |||||||| | |||||||    
T  12174424 gtaaatgaatcttttgtaacaaaaactgcaagaag 12174458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 1 - 115
Target Start/End: Complemental strand, 34573313 - 34573197
Alignment:
Q  1 attattatttttacttagtagttaatactatatagatatat--ttcttattaactcgttttgattacttctattgaaaatatattttcaaataaccttga 98  Q
    ||||||||||||| ||||||||||||| |||||||||||||  ||||| |||| ||| |||||||| || ||||||||||||||||| ||| ||| ||||    
T  34573313 attattatttttatttagtagttaatattatatagatatatatttctttttaattcggtttgattaattttattgaaaatatatttttaaagaactttga 34573214  T
Q  99 ttatgaatgaatttttt 115  Q
    |||| ||||||| ||||    
T  34573213 ttataaatgaatctttt 34573197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 1 - 140
Target Start/End: Original strand, 31787819 - 31787958
Alignment:
Q  1 attattatttttacttagtagttaatactatatagatatatttcttattaactcgttttgattacttctattgaaaatatattttcaaataaccttgatt 100  Q
    |||||||||| |||||| |||||| || ||  ||||||||||| || |||| ||| |||||||| |||||||||||||||||||  | ||||| || |||    
T  31787819 attattatttgtacttaatagttagtattaagtagatatatttatttttaattcgctttgattaattctattgaaaatatatttgtagataactttaatt 31787918  T
Q  101 atgaatgaattttttgcaacaaaaaatacaagaagaaata 140  Q
    || ||||||| ||||||||| |||||| |||||| |||||    
T  31787919 ataaatgaatattttgcaactaaaaatgcaagaaaaaata 31787958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 26 - 163
Target Start/End: Complemental strand, 31153737 - 31153600
Alignment:
Q  26 tactatatagatatatttcttattaactcgttttgattacttctattgaaaatatattttcaaataaccttgattatgaatgaattttttgcaacaaaaa 125  Q
    ||||||||||||||||||  | |||| || |||| |||| || |||||||||||| |||| ||||||| ||||| |||||||||| |||||||| |||||    
T  31153737 tactatatagatatatttaattttaaatccttttaattaattatattgaaaatatgtttttaaataactttgatcatgaatgaatcttttgcaataaaaa 31153638  T
Q  126 atacaagaagaaatacattcaaatgattaaaagagtat 163  Q
    || |||||  ||| ||| |||||| |||||||| ||||    
T  31153637 atgcaagagaaaaaacactcaaataattaaaagggtat 31153600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 125
Target Start/End: Complemental strand, 35122076 - 35121948
Alignment:
Q  1 attattatttttacttagtagtta---atac-tatatagatatatttcttattaactcgttttgattacttctattgaaaatatattttcaaataacctt 96  Q
    ||||||||||||||||||||||||   |||  |||||| |||||| | |  |||| ||| |||||||| |||||||||||||||||||| | ||||| ||    
T  35122076 attattatttttacttagtagttatatatatatatatatatatatatatatttaattcgctttgattaattctattgaaaatatatttttagataacttt 35121977  T
Q  97 gattatgaatgaattttttgcaacaaaaa 125  Q
    |||||| ||||||| ||||||||||||||    
T  35121976 gattataaatgaatattttgcaacaaaaa 35121948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 57 - 138
Target Start/End: Original strand, 33344881 - 33344962
Alignment:
Q  57 tttgattacttctattgaaaatatattttcaaataaccttgattatgaatgaattttttgcaacaaaaaatacaagaagaaa 138  Q
    |||||||| |||||||||||||||||||| | ||||| |||||||| ||||||| |||||||||||||||| | ||||||||    
T  33344881 tttgattaattctattgaaaatatatttttagataactttgattataaatgaatattttgcaacaaaaaatgctagaagaaa 33344962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 32 - 131
Target Start/End: Complemental strand, 21954576 - 21954477
Alignment:
Q  32 atagatatatttcttattaactcgttttgattacttctattgaaaatatattttcaaataaccttgattatgaatgaattttttgcaacaaaaaatacaa 131  Q
    |||| |||||||||| |||||| |||||||||| ||| |||||||| |||||||  || | |||| ||||||||| | | ||||||||||||||||||||    
T  21954576 atagttatatttctttttaacttgttttgattaattccattgaaaaaatattttttaagagccttaattatgaataagtcttttgcaacaaaaaatacaa 21954477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 34969400 - 34969478
Alignment:
Q  1 attattatttttacttagtagttaatactatatagatatatttcttattaactcgttttgattacttctattgaaaata 79  Q
    |||||||||||||||||||||||  |||||||||||||||||| || |||| || || ||||||  |||||||||||||    
T  34969400 attattatttttacttagtagttggtactatatagatatatttatttttaattctttatgattagatctattgaaaata 34969478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 160 - 207
Target Start/End: Original strand, 11975714 - 11975761
Alignment:
Q  160 gtatgtcatatcacatactagtggttaggctcttaggagattagaatt 207  Q
    |||||||  |||||||||||||||||||||||||||||||||||||||    
T  11975714 gtatgtcccatcacatactagtggttaggctcttaggagattagaatt 11975761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 7 - 109
Target Start/End: Complemental strand, 19638618 - 19638517
Alignment:
Q  7 atttttacttagtagttaatactatatagatatatttcttattaactcgttttgattacttctattgaaaatatattttcaaataaccttgattatgaat 106  Q
    ||||||||||||| |||||||||||||| | ||||| | | ||||||| |||| || | || |||  |||||||||||||| | ||||||||||||||||    
T  19638618 atttttacttagtggttaatactatatataaatattcccttttaactcattttcatcaatt-tatcaaaaatatattttcagagaaccttgattatgaat 19638520  T
Q  107 gaa 109  Q
    |||    
T  19638519 gaa 19638517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 160
Target Start/End: Complemental strand, 33607186 - 33607024
Alignment:
Q  1 attattatttttacttagtagttaatactatatagatatatttcttattaactcgttttgattacttctattgaaaatatattttcaaataaccttga-- 98  Q
    ||||||||||||| ||| ||||||||| |||||| |||  ||| || | ||||| ||||||||| ||||||||||||||| |||| ||| |||||| |      
T  33607186 attattatttttatttaatagttaatagtatatacataattttattttcaactcattttgattaattctattgaaaatat-tttttaaaaaaccttaatt 33607088  T
Q  99 --ttatgaatgaattttttgcaacaaaaaatacaagaagaaatacattcaaatgattaaaagag 160  Q
      |||||||||||  ||||||||| ||| ||| | ||||||| | |||  ||| ||||||||||    
T  33607087 agttatgaatgaaccttttgcaactaaagatatacgaagaaaaatatttgaataattaaaagag 33607024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 57 - 138
Target Start/End: Complemental strand, 34329892 - 34329811
Alignment:
Q  57 tttgattacttctattgaaaatatattttcaaataaccttgattatgaatgaattttttgcaacaaaaaatacaagaagaaa 138  Q
    |||||||| |||||||||||||||||||| | | ||| ||| |||| |||  || |||||||||||||||| ||||||||||    
T  34329892 tttgattaattctattgaaaatatatttttagagaactttgcttataaatagatcttttgcaacaaaaaatgcaagaagaaa 34329811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 160 - 207
Target Start/End: Original strand, 439795 - 439842
Alignment:
Q  160 gtatgtcatatcacatactagtggttaggctcttaggagattagaatt 207  Q
    |||||||  ||||||||| |||||||||||||||||||||||||||||    
T  439795 gtatgtcccatcacatacaagtggttaggctcttaggagattagaatt 439842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 139
Target Start/End: Original strand, 13229311 - 13229441
Alignment:
Q  1 attattatttttacttagtagttaatactatatagatatatttcttattaactcgtt-ttgattacttctattgaaaatatattttcaaataaccttgat 99  Q
    ||||||||||||||||||||||   ||| ||||||| | ||||||| |||| | ||  ||||||| ||||||||||||||| |||| |         |||    
T  13229311 attattatttttacttagtagtcggtacaatatagaaaaatttctttttaatttgtccttgattaattctattgaaaatatcttttta---------gat 13229401  T
Q  100 tatgaatgaattttttgcaacaaaaaatacaagaagaaat 139  Q
    ||| ||||||| || |||||||||||||||||||||||||    
T  13229402 tataaatgaatcttgtgcaacaaaaaatacaagaagaaat 13229441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 160 - 207
Target Start/End: Complemental strand, 31722298 - 31722251
Alignment:
Q  160 gtatgtcatatcacatactagtggttaggctcttaggagattagaatt 207  Q
    |||||||  ||||||||| |||||||||||||||||||||||||||||    
T  31722298 gtatgtcccatcacataccagtggttaggctcttaggagattagaatt 31722251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 169 - 207
Target Start/End: Original strand, 304508 - 304546
Alignment:
Q  169 atcacatactagtggttaggctcttaggagattagaatt 207  Q
    ||||||||| |||||||||||||||||||||||||||||    
T  304508 atcacataccagtggttaggctcttaggagattagaatt 304546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 1 - 138
Target Start/End: Complemental strand, 10669003 - 10668869
Alignment:
Q  1 attattatttttacttagtagttaatactatatagatatatttcttattaactcgttttgattacttctattgaaaatatattttcaaataaccttgatt 100  Q
    ||||||||||||||||| |||||| || ||||||||||||| |||| | || ||  |||||||| || |||||||||||| ||||  |  ||| ||||||    
T  10669003 attattatttttacttattagttagtattatatagatatatatcttttgaattc-atttgattaattatattgaaaatatttttt--agaaacgttgatt 10668907  T
Q  101 atgaatgaattttttgcaacaaaaaatacaagaagaaa 138  Q
    || ||||||| | |||  ||||||||| ||| ||||||    
T  10668906 ataaatgaatctattgagacaaaaaatccaaaaagaaa 10668869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 3359552 - 3359625
Alignment:
Q  1 attattatttttacttagtagttaatactatatagatatatttcttattaactcgttttgattacttctattga 74  Q
    ||||||||||||| | |||| || ||| |||||| ||||||||||| ||||  ||||||||||| |||||||||    
T  3359552 attattatttttattcagtacttcataatatatacatatatttctttttaatccgttttgattatttctattga 3359625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 95 - 144
Target Start/End: Original strand, 11274650 - 11274699
Alignment:
Q  95 ttgattatgaatgaattttttgcaacaaaaaatacaagaagaaatacatt 144  Q
    |||||||||||||||| |||||||||||||| |||||||| ||| |||||    
T  11274650 ttgattatgaatgaatattttgcaacaaaaagtacaagaaaaaaaacatt 11274699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 160 - 205
Target Start/End: Original strand, 31272020 - 31272065
Alignment:
Q  160 gtatgtcatatcacatactagtggttaggctcttaggagattagaa 205  Q
    ||||||| ||||||||||  ||||||||||||||||||||||||||    
T  31272020 gtatgtcctatcacataccggtggttaggctcttaggagattagaa 31272065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 160 - 205
Target Start/End: Original strand, 31319284 - 31319329
Alignment:
Q  160 gtatgtcatatcacatactagtggttaggctcttaggagattagaa 205  Q
    ||||||| |||||||||  |||||||||||||||||||||||||||    
T  31319284 gtatgtcctatcacatagcagtggttaggctcttaggagattagaa 31319329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 160 - 207
Target Start/End: Original strand, 16396063 - 16396110
Alignment:
Q  160 gtatgtcatatcacatactagtggttaggctcttaggagattagaatt 207  Q
    |||||||  ||||||||| ||||||||||||| |||||||||||||||    
T  16396063 gtatgtcccatcacataccagtggttaggctcgtaggagattagaatt 16396110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 48 - 140
Target Start/End: Complemental strand, 6549783 - 6549690
Alignment:
Q  48 ttaactcgttttgattacttctattgaaaatatattttcaaataaccttgattatgaatgaat-tttttgcaacaaaaaatacaagaagaaata 140  Q
    |||||||  |||| ||| ||||||||||||||| ||||   |||||||| ||| |  | |||| |||||||||||||| |||||||||||||||    
T  6549783 ttaactccatttgcttaattctattgaaaatatgtttttgcataaccttaatttttgaggaatctttttgcaacaaaagatacaagaagaaata 6549690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 4338016 - 4337976
Alignment:
Q  1 attattatttttacttagtagttaatactatatagatatat 41  Q
    ||||||| |||||||||||||||| ||||||||| ||||||    
T  4338016 attattacttttacttagtagttagtactatatatatatat 4337976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 66 - 158
Target Start/End: Original strand, 5608081 - 5608172
Alignment:
Q  66 ttctattgaaaatatattttcaaataaccttgattatgaatgaattttttgcaacaaaaaatacaagaagaaatacattcaaatgattaaaag 158  Q
    ||||||||| |||||||||  | | ||  |||||||||||||| | ||||| ||||||||||| || |||||| |||||||||| ||| ||||    
T  5608081 ttctattgagaatatatttctagagaattttgattatgaatga-tcttttgtaacaaaaaatataaaaagaaagacattcaaataatttaaag 5608172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 82; Significance: 6e-39; HSPs: 49)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 82; E-Value: 6e-39
Query Start/End: Original strand, 1 - 126
Target Start/End: Original strand, 23870051 - 23870176
Alignment:
Q  1 attattatttttacttagtagttaatactatatagatatatttcttattaactcgttttgattacttctattgaaaatatattttcaaataaccttgatt 100  Q
    |||||||||||||||||||||||| |||||||||||||||| | || |||| |||||||||||| |||||||||||||||||||| | ||||| ||||||    
T  23870051 attattatttttacttagtagttagtactatatagatatatatttttttaattcgttttgattaattctattgaaaatatatttttagataactttgatt 23870150  T
Q  101 atgaatgaattttttgcaacaaaaaa 126  Q
    || ||||||| |||||||||||||||    
T  23870151 ataaatgaatattttgcaacaaaaaa 23870176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 158
Target Start/End: Original strand, 2113843 - 2114000
Alignment:
Q  1 attattatttttacttagtagttaatactatatagatatatttcttattaactcgttttgattacttctattgaaaatatattttcaaataaccttgatt 100  Q
    |||||||| ||||  ||||||||| ||||| |||||||||||||||  ||| | | |||||||| || |||||||||||| |||| ||| ||||||||||    
T  2113843 attattatctttatgtagtagttagtactacatagatatatttctttctaaattgctttgattaattatattgaaaatatgtttttaaagaaccttgatt 2113942  T
Q  101 atgaatgaattttttgcaacaaaaaatacaagaagaaatacattcaaatgattaaaag 158  Q
    |||||| ||| |||||||| |||||||||||||||||| |||||||||| ||||||||    
T  2113943 atgaattaatcttttgcaataaaaaatacaagaagaaagacattcaaataattaaaag 2114000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 9 - 138
Target Start/End: Complemental strand, 3643262 - 3643133
Alignment:
Q  9 ttttacttagtagttaatactatatagatatatttcttattaactcgttttgattacttctattgaaaatatattttcaaataaccttgattatgaatga 108  Q
    |||||||||||||||| ||||||||||||||||||||| |||| | |  ||||||| || |||||||||  |||||| ||| | | ||||| || |||||    
T  3643262 ttttacttagtagttagtactatatagatatatttctttttaatttgcattgattaattatattgaaaagttatttttaaagagctttgataataaatga 3643163  T
Q  109 attttttgcaacaaaaaatacaagaagaaa 138  Q
    ||||| ||||||||||||| ||||||||||    
T  3643162 attttgtgcaacaaaaaatccaagaagaaa 3643133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 1 - 126
Target Start/End: Complemental strand, 36071682 - 36071557
Alignment:
Q  1 attattatttttacttagtagttaatactatatagatatatttcttattaactcgttttgattacttctattgaaaatatattttcaaataaccttgatt 100  Q
    ||||||||||||||||  |||||| ||||||||||||||||||||| |||| |   |||||||| ||| |||||||||||||||| | | ||| ||||||    
T  36071682 attattatttttacttgatagttagtactatatagatatatttctttttaattttctttgattaattcaattgaaaatatatttttagagaactttgatt 36071583  T
Q  101 atgaatgaattttttgcaacaaaaaa 126  Q
    || ||||||| || ||||||||||||    
T  36071582 ataaatgaatcttatgcaacaaaaaa 36071557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 5 - 157
Target Start/End: Complemental strand, 15986991 - 15986839
Alignment:
Q  5 ttatttttacttagtagttaatactatatagatatatttcttattaactcgttttgattacttctattgaaaatatattttcaaataaccttgattatga 104  Q
    |||| |||| |||||||||| |||||||||||||||||| || ||||   |||||||||| |||||||||||||||| ||| ||| |||||| || ||||    
T  15986991 ttatctttaattagtagttagtactatatagatatatttatttttaatgtgttttgattaattctattgaaaatataattttaaagaaccttaatcatga 15986892  T
Q  105 atgaattttttgcaacaaaaaatacaagaagaaatacattcaaatgattaaaa 157  Q
    |||||| |||| |   | || ||||||||||||| ||||| |||| |||||||    
T  15986891 atgaatcttttacggtataagatacaagaagaaaaacatttaaataattaaaa 15986839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 2 - 125
Target Start/End: Original strand, 7853300 - 7853423
Alignment:
Q  2 ttattatttttacttagtagttaatactatatagatatatttcttattaactcgttttgattacttctattgaaaatatattttcaaataaccttgatta 101  Q
    ||||||||||||||||||||||| |||||||||||||||| || | |||| ||  |||||||| |  ||||||||||||||||| | | ||| |||||||    
T  7853300 ttattatttttacttagtagttagtactatatagatatatatccttttaattcagtttgattaatgatattgaaaatatatttttagaaaactttgatta 7853399  T
Q  102 tgaatgaattttttgcaacaaaaa 125  Q
    | |||||||| ||||||| |||||    
T  7853400 taaatgaattctttgcaataaaaa 7853423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 1 - 127
Target Start/End: Original strand, 29118475 - 29118602
Alignment:
Q  1 attattatttttacttagtagttaatactatatagatatatttcttattaactcg-ttttgattacttctattgaaaatatattttcaaataaccttgat 99  Q
    |||||||||||||  ||||||||| ||||| ||||||||||||||| |||| | | |||| |||| || |||||||||||| |||| ||| ||| |||||    
T  29118475 attattatttttatgtagtagttagtactacatagatatatttctttttaaattgcttttaattaattatattgaaaatatgtttttaaagaactttgat 29118574  T
Q  100 tatgaatgaattttttgcaacaaaaaat 127  Q
    ||||||||||| |||||||| |||||||    
T  29118575 tatgaatgaatattttgcaataaaaaat 29118602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 8 - 138
Target Start/End: Original strand, 12320415 - 12320545
Alignment:
Q  8 tttttacttagtagttaatactatatagatatatttcttattaactcgttttgattacttctattgaaaatatattttcaaataaccttgattatgaatg 107  Q
    ||||||||||||||||| ||  |||||||||||| |||| |||| ||| |||||||| || |||||| ||||| |||| ||| ||| | |||||| ||||    
T  12320415 tttttacttagtagttagtataatatagatatatatctttttaattcggtttgattaattatattgagaatatttttttaaaaaacttcgattataaatg 12320514  T
Q  108 aattttttgcaacaaaaaatacaagaagaaa 138  Q
    ||| ||||||||||||||||  |||||||||    
T  12320515 aatattttgcaacaaaaaatgtaagaagaaa 12320545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 1 - 138
Target Start/End: Complemental strand, 4596584 - 4596447
Alignment:
Q  1 attattatttttacttagtagttaatactatatagatatatttcttattaactcgttttgattacttctattgaaaatatattttcaaataaccttgatt 100  Q
    ||||||||||||| ||||| |||| || |||||| |||||||| || |||| ||  |||||||  || ||||||||||||||  |  || ||||||||||    
T  4596584 attattatttttatttagttgttagtaatatatatatatatttgtttttaattcactttgattgattttattgaaaatatatactagaaaaaccttgatt 4596485  T
Q  101 atgaatgaattttttgcaacaaaaaatacaagaagaaa 138  Q
    |||||||||| |||||||||||||||| ||| ||||||    
T  4596484 atgaatgaatcttttgcaacaaaaaatgcaaaaagaaa 4596447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 144
Target Start/End: Original strand, 7102147 - 7102289
Alignment:
Q  1 attattatttttacttagtagttaatactatatagatatatttcttattaactcgttttgattacttctattgaaaatatattttcaaataaccttgatt 100  Q
    ||||||||||||| |  | ||||| || ||||||||||||||| || |||| | |||||||||| | |||||||||||| ||||| | | ||| || |||    
T  7102147 attattatttttagtcggcagttagtattatatagatatatttttt-ttaatttgttttgattaatcctattgaaaatacatttttagagaacttttatt 7102245  T
Q  101 atgaatgaattttttgcaacaaaaaatacaagaagaaatacatt 144  Q
    || ||||||| || ||||||||||| |||||||||||| |||||    
T  7102246 ataaatgaatcttgtgcaacaaaaagtacaagaagaaaaacatt 7102289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 3 - 126
Target Start/End: Complemental strand, 43515980 - 43515857
Alignment:
Q  3 tattatttttacttagtagttaatactatatagatatatttcttattaactcgttttgattacttctattgaaaatatattttcaaataaccttgattat 102  Q
    |||| |||||||||| |||||| || ||||||||||||| |||| |||| | | |||||||| || |||| | |||||||| | | | ||| ||||||||    
T  43515980 tattttttttacttattagttagtattatatagatatatatctttttaatttggtttgattaattatattaagaatatattgttagaaaactttgattat 43515881  T
Q  103 gaatgaattttttgcaacaaaaaa 126  Q
     ||||||| |||||||||||||||    
T  43515880 aaatgaatcttttgcaacaaaaaa 43515857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 138
Target Start/End: Original strand, 5627500 - 5627632
Alignment:
Q  1 attattatttttacttagtagttaatactatatagatatatttcttattaactcgttttgattacttctattgaaaatatattttcaaataaccttgatt 100  Q
    |||||||||||||| | ||||||| || |||||| ||     |||| |||| |||||||||||| || ||||||||| || |||| | |||||  |||||    
T  5627500 attattatttttacatggtagttagtaatatatatat-----tctttttaattcgttttgattaattatattgaaaaaatgtttttatataactctgatt 5627594  T
Q  101 atgaatgaattttttgcaacaaaaaatacaagaagaaa 138  Q
    || ||||||| |||||||||||||||| ||| ||||||    
T  5627595 ataaatgaatattttgcaacaaaaaatgcaataagaaa 5627632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 36 - 157
Target Start/End: Complemental strand, 20811597 - 20811476
Alignment:
Q  36 atatatttcttattaactcgttttgattacttctattgaaaatatattttcaaataaccttgattatgaatgaattttttgcaacaaaaaatacaagaag 135  Q
    |||||||| || |||||| | ||| |||| || ||||||||||||||||| ||| ||  |||||||||| |||| |||||||||| ||||||  ||||||    
T  20811597 atatatttgtttttaacttgctttaattatttatattgaaaatatatttttaaagaattttgattatgagtgaagtttttgcaacgaaaaatgaaagaag 20811498  T
Q  136 aaatacattcaaatgattaaaa 157  Q
     || |||||| ||| |||||||    
T  20811497 caaaacattcgaataattaaaa 20811476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 154
Target Start/End: Complemental strand, 25779767 - 25779614
Alignment:
Q  1 attattatttttacttagtagttaatactatatagatatatttcttattaactcgttttgattacttctattgaaaatatattttcaaataaccttgatt 100  Q
    ||||||||||||||||| |||||| ||| ||  | ||||||||||| ||| ||  ||||||||| || | || |||||||||||  | | ||| ||||||    
T  25779767 attattatttttacttattagttagtacgatgcacatatatttctttttacctttttttgattaattttgttaaaaatatatttgtagaaaactttgatt 25779668  T
Q  101 atgaatgaattttttgcaacaaaaaatacaagaagaaatacattcaaatgatta 154  Q
    |||||||||| || ||||||||| ||| ||| ||| || | |||||||| ||||    
T  25779667 atgaatgaatcttctgcaacaaagaatgcaaaaaggaagatattcaaataatta 25779614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 159 - 207
Target Start/End: Original strand, 5419591 - 5419639
Alignment:
Q  159 agtatgtcatatcacatactagtggttaggctcttaggagattagaatt 207  Q
    |||||||| |||||||||||||||||||||||||||| |||||||||||    
T  5419591 agtatgtcctatcacatactagtggttaggctcttagaagattagaatt 5419639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 48 - 128
Target Start/End: Original strand, 8240881 - 8240961
Alignment:
Q  48 ttaactcgttttgattacttctattgaaaatatattttcaaataaccttgattatgaatgaattttttgcaacaaaaaata 128  Q
    |||||| |||||||||| |||||| ||||||||||||||||| || |||  |||||||||  | |||||||||||||||||    
T  8240881 ttaacttgttttgattaattctatagaaaatatattttcaaagaatcttatttatgaatggttcttttgcaacaaaaaata 8240961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 31 - 157
Target Start/End: Complemental strand, 29369992 - 29369858
Alignment:
Q  31 tatagatatatttcttattaactcgttttgattacttctattgaaaatatattttca---aataaccttgattatgaatgaattttttg-----caacaa 122  Q
    |||||||| |||| || |||| | |||||||||| |||||||||||||||||||| |   ||| | | | ||||||||||||| ||||      ||||||    
T  29369992 tatagataaatttatttttaatttgttttgattaattctattgaaaatatatttttagagaatcatcataattatgaatgaatcttttaatttacaacaa 29369893  T
Q  123 aaaatacaagaagaaatacattcaaatgattaaaa 157  Q
    |||||||||||||||| |||||||||| |||||||    
T  29369892 aaaatacaagaagaaagacattcaaataattaaaa 29369858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 160 - 207
Target Start/End: Original strand, 16024608 - 16024655
Alignment:
Q  160 gtatgtcatatcacatactagtggttaggctcttaggagattagaatt 207  Q
    |||||||  |||||||||||||||||||||||||||||||||||||||    
T  16024608 gtatgtctcatcacatactagtggttaggctcttaggagattagaatt 16024655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 17 - 159
Target Start/End: Original strand, 37226260 - 37226396
Alignment:
Q  17 agtagttaatactatatagatatatttcttattaactcgttttgattacttctattgaaaatatattttcaaataaccttgattatgaatgaattttttg 116  Q
    ||||||||||| ||||| ||||||||| |  |||||||      |||| |||||||  |||||||||||||||| |  ||||||||  |||||| |||||    
T  37226260 agtagttaatattatattgatatatttttatttaactc------attaattctattagaaatatattttcaaatgattttgattattgatgaatcttttg 37226353  T
Q  117 caacaaaaaatacaagaagaaatacattcaaatgattaaaaga 159  Q
    |||||||||||  || || ||| |||||||||| |||||||||    
T  37226354 caacaaaaaatgaaataaaaaagacattcaaataattaaaaga 37226396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 160 - 207
Target Start/End: Original strand, 49375058 - 49375105
Alignment:
Q  160 gtatgtcatatcacatactagtggttaggctcttaggagattagaatt 207  Q
    ||||||| |||||||||| |||||||||||||||||||||||||||||    
T  49375058 gtatgtcctatcacataccagtggttaggctcttaggagattagaatt 49375105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 157
Target Start/End: Original strand, 53178753 - 53178907
Alignment:
Q  1 attattatttttacttagtagttaatactatatagatatatttcttattaactcgttttgattacttctattgaaaatatattttcaaataaccttgatt 100  Q
    |||||| | |||| |||||||||| || |||||| |||||||| ||  |||||   |||||||| || |||||||  |||||||| ||  ||| ||||||    
T  53178753 attattttatttatttagtagttagtattatataaatatatttttt--taacttactttgattaattttattgaatgtatatttttaacgaactttgatt 53178850  T
Q  101 atgaatgaattttttgcaac-aaaaaatacaagaagaaatacattcaaatgattaaaa 157  Q
    ||||||||| |||||||||| ||||||||| | |||||| ||||| |||| |||||||    
T  53178851 atgaatgaa-tttttgcaacaaaaaaataccataagaaagacatttaaataattaaaa 53178907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 58 - 138
Target Start/End: Complemental strand, 40807914 - 40807834
Alignment:
Q  58 ttgattacttctattgaaaatatattttcaaataaccttgattatgaatgaattttttgcaacaaaaaatacaagaagaaa 138  Q
    ||||||| ||||||| ||||||| |||| | ||||| |||||||||||||||| || | ||||||||||| ||| ||||||    
T  40807914 ttgattaattctattaaaaatatgtttttagataacattgattatgaatgaatcttatccaacaaaaaatgcaaaaagaaa 40807834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 160 - 207
Target Start/End: Complemental strand, 2013124 - 2013077
Alignment:
Q  160 gtatgtcatatcacatactagtggttaggctcttaggagattagaatt 207  Q
    ||||||| |||||||||| |||||||||| ||||||||||||||||||    
T  2013124 gtatgtcctatcacataccagtggttaggatcttaggagattagaatt 2013077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 98 - 157
Target Start/End: Original strand, 48653769 - 48653828
Alignment:
Q  98 attatgaatgaattttttgcaacaaaaaatacaagaagaaatacattcaaatgattaaaa 157  Q
    ||||||||||||| ||||||||||||| || |||||||||| |||||| ||| |||||||    
T  48653769 attatgaatgaatcttttgcaacaaaacatgcaagaagaaagacattcgaataattaaaa 48653828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 55147951 - 55147880
Alignment:
Q  1 attattatttttacttagtagttaatactatatagatatatttcttattaactcgttttgattacttctatt 72  Q
    ||||||||||||||||| |||| | ||| | ||||||||||||||| |||| | |||||||||| |||||||    
T  55147951 attattatttttacttaatagtcactacaacatagatatatttctttttaatttgttttgattaattctatt 55147880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 160 - 207
Target Start/End: Complemental strand, 56463064 - 56463017
Alignment:
Q  160 gtatgtcatatcacatactagtggttaggctcttaggagattagaatt 207  Q
    |||||||  ||||||||| |||||||||||||||||||||||||||||    
T  56463064 gtatgtcccatcacataccagtggttaggctcttaggagattagaatt 56463017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 160 - 205
Target Start/End: Complemental strand, 167902 - 167857
Alignment:
Q  160 gtatgtcatatcacatactagtggttaggctcttaggagattagaa 205  Q
    ||||||| |||||||||| |||||||| ||||||||||||||||||    
T  167902 gtatgtcctatcacatacgagtggttaagctcttaggagattagaa 167857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 170 - 207
Target Start/End: Complemental strand, 52416317 - 52416280
Alignment:
Q  170 tcacatactagtggttaggctcttaggagattagaatt 207  Q
    |||||||| |||||||||||||||||||||||||||||    
T  52416317 tcacataccagtggttaggctcttaggagattagaatt 52416280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 160 - 207
Target Start/End: Original strand, 35159462 - 35159509
Alignment:
Q  160 gtatgtcatatcacatactagtggttaggctcttaggagattagaatt 207  Q
    |||||||  ||||||||| |||||||||||||||||||||||| ||||    
T  35159462 gtatgtcccatcacataccagtggttaggctcttaggagattaaaatt 35159509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 160 - 207
Target Start/End: Complemental strand, 38217679 - 38217632
Alignment:
Q  160 gtatgtcatatcacatactagtggttaggctcttaggagattagaatt 207  Q
    |||||||  ||||||||| | |||||||||||||||||||||||||||    
T  38217679 gtatgtcccatcacataccaatggttaggctcttaggagattagaatt 38217632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 160 - 207
Target Start/End: Original strand, 40728771 - 40728818
Alignment:
Q  160 gtatgtcatatcacatactagtggttaggctcttaggagattagaatt 207  Q
    |||||||  ||||||||| ||||||||| |||||||||||||||||||    
T  40728771 gtatgtcccatcacataccagtggttagactcttaggagattagaatt 40728818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 160 - 207
Target Start/End: Original strand, 45229811 - 45229858
Alignment:
Q  160 gtatgtcatatcacatactagtggttaggctcttaggagattagaatt 207  Q
    |||||||  ||||||||| |||||||||||| ||||||||||||||||    
T  45229811 gtatgtcccatcacataccagtggttaggcttttaggagattagaatt 45229858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 160 - 207
Target Start/End: Original strand, 45462930 - 45462977
Alignment:
Q  160 gtatgtcatatcacatactagtggttaggctcttaggagattagaatt 207  Q
    |||||||  ||||||||||||||||||||||||||||| |||| ||||    
T  45462930 gtatgtcccatcacatactagtggttaggctcttaggatattataatt 45462977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 160 - 207
Target Start/End: Original strand, 55137389 - 55137436
Alignment:
Q  160 gtatgtcatatcacatactagtggttaggctcttaggagattagaatt 207  Q
    |||||||  ||||||||| |||||||||||||||| ||||||||||||    
T  55137389 gtatgtcccatcacataccagtggttaggctcttacgagattagaatt 55137436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 169 - 207
Target Start/End: Complemental strand, 9035485 - 9035447
Alignment:
Q  169 atcacatactagtggttaggctcttaggagattagaatt 207  Q
    ||||||||| ||| |||||||||||||||||||||||||    
T  9035485 atcacataccagttgttaggctcttaggagattagaatt 9035447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 169 - 207
Target Start/End: Original strand, 30004308 - 30004346
Alignment:
Q  169 atcacatactagtggttaggctcttaggagattagaatt 207  Q
    ||||||||| |||||||||||||||| ||||||||||||    
T  30004308 atcacataccagtggttaggctcttatgagattagaatt 30004346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 161 - 207
Target Start/End: Complemental strand, 38550667 - 38550621
Alignment:
Q  161 tatgtcatatcacatactagtggttaggctcttaggagattagaatt 207  Q
    |||||| |||||||||  ||| |||||||||||||||||||||||||    
T  38550667 tatgtcctatcacatagcagtagttaggctcttaggagattagaatt 38550621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 161 - 207
Target Start/End: Original strand, 45925334 - 45925380
Alignment:
Q  161 tatgtcatatcacatactagtggttaggctcttaggagattagaatt 207  Q
    |||||| |||||||||  |||||||||| ||||||||||||||||||    
T  45925334 tatgtcctatcacatagcagtggttaggatcttaggagattagaatt 45925380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 48 - 110
Target Start/End: Complemental strand, 46443866 - 46443804
Alignment:
Q  48 ttaactcgttttgattacttctattgaaaatatattttcaaataaccttgattatgaatgaat 110  Q
    ||||||||||||||||| || ||||  ||||||||||| | ||||  ||||||||||||||||    
T  46443866 ttaactcgttttgattaattttattataaatatatttttagataattttgattatgaatgaat 46443804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 169 - 207
Target Start/End: Original strand, 51539365 - 51539403
Alignment:
Q  169 atcacatactagtggttaggctcttaggagattagaatt 207  Q
    ||||||||  |||||||||||||||||||||||||||||    
T  51539365 atcacataacagtggttaggctcttaggagattagaatt 51539403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 3 - 138
Target Start/End: Original strand, 1749999 - 1750133
Alignment:
Q  3 tattatttttacttagtagt-taatactatatagatatatttcttattaactcgttttgattacttctattgaaaatatattttcaaataaccttgatta 101  Q
    |||||| ||||||||||||| | | | |||||||||||| || ||  |||||| ||||||||  ||||||| |||||  ||||| ||| |||||||||||    
T  1749999 tattatgtttacttagtagtgttagattatatagatataattttt--taactctttttgatttattctattaaaaatgcatttttaaagaaccttgatta 1750096  T
Q  102 tgaatgaattttttgcaacaaaaaatacaagaagaaa 138  Q
      ||| ||| |||| |||| ||||||  |||||||||    
T  1750097 caaataaatcttttacaacgaaaaatgaaagaagaaa 1750133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 168 - 205
Target Start/End: Original strand, 6964224 - 6964261
Alignment:
Q  168 tatcacatactagtggttaggctcttaggagattagaa 205  Q
    |||||||||  |||||||||||||||||||||||||||    
T  6964224 tatcacatagcagtggttaggctcttaggagattagaa 6964261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 19 - 72
Target Start/End: Complemental strand, 40807977 - 40807924
Alignment:
Q  19 tagttaatactatatagatatatttcttattaactcgttttgattacttctatt 72  Q
    |||||| || |||||||||||||||||| |||| ||| |||||||| |||||||    
T  40807977 tagttagtattatatagatatatttctttttaattcgctttgattaattctatt 40807924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 160 - 205
Target Start/End: Complemental strand, 43841431 - 43841386
Alignment:
Q  160 gtatgtcatatcacatactagtggttaggctcttaggagattagaa 205  Q
    |||||||  ||||||||| ||||||||||||| |||||||||||||    
T  43841431 gtatgtcccatcacataccagtggttaggctcataggagattagaa 43841386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 48 - 127
Target Start/End: Complemental strand, 7540483 - 7540403
Alignment:
Q  48 ttaactcgttttgattacttctattgaaaata-tattttcaaataaccttgattatgaatgaattttttgcaacaaaaaat 127  Q
    |||||| |||||||||| ||||||| |||||| | ||||  |  ||||||  |||||||||||| ||||||||||||||||    
T  7540483 ttaacttgttttgattaattctattaaaaataattttttttagaaaccttatttatgaatgaatcttttgcaacaaaaaat 7540403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 171 - 207
Target Start/End: Original strand, 31093852 - 31093888
Alignment:
Q  171 cacatactagtggttaggctcttaggagattagaatt 207  Q
    ||||||| ||||||||||||||||||| |||||||||    
T  31093852 cacataccagtggttaggctcttaggaaattagaatt 31093888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 169 - 205
Target Start/End: Original strand, 33281837 - 33281873
Alignment:
Q  169 atcacatactagtggttaggctcttaggagattagaa 205  Q
    ||||||||  |||||||||||||||||||||||||||    
T  33281837 atcacatagcagtggttaggctcttaggagattagaa 33281873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 38087663 - 38087703
Alignment:
Q  1 attattatttttacttagtagttaatactatatagatatat 41  Q
    ||||||||||||||||| |||||| ||| ||||||||||||    
T  38087663 attattatttttacttaatagttagtacaatatagatatat 38087703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 32 - 64
Target Start/End: Complemental strand, 50521330 - 50521298
Alignment:
Q  32 atagatatatttcttattaactcgttttgatta 64  Q
    ||||||||||||||| |||||||||||||||||    
T  50521330 atagatatatttctttttaactcgttttgatta 50521298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 78; Significance: 2e-36; HSPs: 34)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 158
Target Start/End: Complemental strand, 26914468 - 26914311
Alignment:
Q  1 attattatttttacttagtagttaatactatatagatatatttcttattaactcgttttgattacttctattgaaaatatattttcaaataaccttgatt 100  Q
    |||||||||||||||||||||||| || |||||| |||| |||  | |||| |||||||||||| || ||||||||||||||||| ||||||| || |||    
T  26914468 attattatttttacttagtagttagtattatatacatatgtttacttttaattcgttttgattaattatattgaaaatatatttttaaataacgttaatt 26914369  T
Q  101 atgaatgaattttttgcaacaaaaaatacaagaagaaatacattcaaatgattaaaag 158  Q
    || ||||||| |||||||||||||||| |||||||||| | ||| |||| ||||||||    
T  26914368 ataaatgaatattttgcaacaaaaaatgcaagaagaaaaatattaaaataattaaaag 26914311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 1 - 137
Target Start/End: Original strand, 35812618 - 35812755
Alignment:
Q  1 attattatttttacttagtagttaatactatatagatatatttcttattaactcgttttgattacttctattga-aaatatattttcaaataaccttgat 99  Q
    ||||||||||||||||| || ||| ||||||||||||||||||||| |||| ||| |||||| | ||||||||| ||||||||||| | ||||| |||||    
T  35812618 attattatttttacttaataattagtactatatagatatatttctttttaattcgctttgatcaattctattgataaatatatttttagataactttgat 35812717  T
Q  100 tatgaatgaattttttgcaacaaaaaatacaagaagaa 137  Q
    ||| ||||||| |||||||||||||||| |||||||||    
T  35812718 tataaatgaatattttgcaacaaaaaatgcaagaagaa 35812755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 1 - 158
Target Start/End: Complemental strand, 33480615 - 33480459
Alignment:
Q  1 attattatttttacttagtagttaatactatatagatatatttcttattaactcgttttgattacttctattgaaaatatattttcaaataaccttgatt 100  Q
    |||||||||||||  || |||||| ||||| |||||||||||||||  ||| | | |||||||| || |||| ||||||| |||| ||| |||||| |||    
T  33480615 attattatttttatgtaatagttagtactacatagatatatttctttctaaattgctttgattaattatattaaaaatatgtttttaaagaacctt-att 33480517  T
Q  101 atgaatgaattttttgcaacaaaaaatacaagaagaaatacattcaaatgattaaaag 158  Q
    |||||| ||| || ||||| |||||||||||||||||| |||||||||| ||||||||    
T  33480516 atgaattaatcttctgcaataaaaaatacaagaagaaagacattcaaataattaaaag 33480459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 9 - 157
Target Start/End: Complemental strand, 42336062 - 42335914
Alignment:
Q  9 ttttacttagtagttaatactatatagatatatttcttattaactcgttttgattacttctattgaaaatatattttcaaataaccttgattatgaatga 108  Q
    ||||| ||| |||||| || |||||||||||||||||| |||| ||| ||| |||| || || |||||||||||||| ||| ||| |||||||| |||||    
T  42336062 ttttagttaatagttagtattatatagatatatttctttttaattcggtttaattaattatagtgaaaatatatttttaaaaaactttgattataaatga 42335963  T
Q  109 attttttgcaacaaaaaatacaagaagaaatacattcaaatgattaaaa 157  Q
    || ||||||||||||||||  ||||| |||   ||| ||||||||||||    
T  42335962 atcttttgcaacaaaaaatgtaagaaaaaaactattaaaatgattaaaa 42335914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 36 - 138
Target Start/End: Original strand, 3351119 - 3351221
Alignment:
Q  36 atatatttcttattaactcgttttgattacttctattgaaaatatattttcaaataaccttgattatgaatgaattttttgcaacaaaaaatacaagaag 135  Q
    ||||||||||| |||| ||| |||||||| ||||||||||| |||||||| | ||||| |||||||| ||||||| |||| ||||||||||| |||||||    
T  3351119 atatatttctttttaattcgctttgattaattctattgaaattatatttttagataactttgattataaatgaatattttacaacaaaaaatgcaagaag 3351218  T
Q  136 aaa 138  Q
    |||    
T  3351219 aaa 3351221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 1 - 134
Target Start/End: Complemental strand, 13431789 - 13431656
Alignment:
Q  1 attattatttttacttagtagttaatactatatagatatatttcttattaactcgttttgattacttctattgaaaatatattttcaaataaccttgatt 100  Q
    ||||||||| ||| ||||||| || || ||||||||||||||| || || | |  |||||| || |||||||||||||||||||    | ||||||||||    
T  13431789 attattattcttatttagtaggtagtattatatagatatatttatttttgattttttttgaataattctattgaaaatatatttgtggagaaccttgatt 13431690  T
Q  101 atgaatgaattttttgcaacaaaaaatacaagaa 134  Q
    |||||||||| ||| |||||||||||||||||||    
T  13431689 atgaatgaatctttagcaacaaaaaatacaagaa 13431656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 1 - 138
Target Start/End: Complemental strand, 3940776 - 3940640
Alignment:
Q  1 attattatttttacttagtagttaatactatatagatatatttcttattaactcgttttgattacttctattgaaaatatattttcaaataaccttgatt 100  Q
    |||||||||||||||||||||| | ||  ||||||||||||||||| |||| |   |||||||| ||||||| ||||||| |||| ||| ||| ||||||    
T  3940776 attattatttttacttagtagtaagtataatatagatatatttctttttaatttactttgattaattctatttaaaatatctttttaaagaactttgatt 3940677  T
Q  101 atgaatgaattttttgcaacaaaaaatacaagaagaaa 138  Q
    || ||| ||| || ||||||| ||||||||| ||||||    
T  3940676 ataaataaatcttgtgcaaca-aaaatacaaaaagaaa 3940640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 4 - 138
Target Start/End: Original strand, 12177813 - 12177948
Alignment:
Q  4 attatttttacttagtagttaatactatatag--atatatttcttattaactcgttttgattacttctattgaaaatatattttcaaataaccttgatta 101  Q
    ||||||||||||||||||||| ||||||||||  |||||| |||| |||| ||| ||| |||| || ||||||||||||||||| | | || ||| ||||    
T  12177813 attatttttacttagtagttagtactatatagatatatatatctttttaattcggtttaattaattttattgaaaatatatttttaga-aaactttatta 12177911  T
Q  102 tgaatgaattttttgcaacaaaaaatacaagaagaaa 138  Q
    |  |||||| ||||||||||||||||  |||||||||    
T  12177912 tagatgaatcttttgcaacaaaaaatgtaagaagaaa 12177948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 1 - 138
Target Start/End: Original strand, 21828165 - 21828301
Alignment:
Q  1 attattatttttacttagtagttaatactatatagatatatttcttattaactcgttttgattacttctattgaaaatatattttcaaataaccttgatt 100  Q
    ||||||||||||||||  |||| | ||| | ||||||||||||||| |||||| |||||||||| | ||||||||||||  |||| | | ||| ||||||    
T  21828165 attattatttttacttcatagtcactacaaaatagatatatttctttttaacttgttttgattaatgctattgaaaata-ctttttagagaactttgatt 21828263  T
Q  101 atgaatgaattttttgcaacaaaaaatacaagaagaaa 138  Q
    || ||||||| || |||||||||||||| |||| ||||    
T  21828264 ataaatgaatcttgtgcaacaaaaaataaaagacgaaa 21828301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 1 - 121
Target Start/End: Complemental strand, 9429461 - 9429342
Alignment:
Q  1 attattatttttacttagtagttaatactatatagatatatttcttattaactcgttttgattacttctattgaaaatatattttcaaataaccttgatt 100  Q
    |||| |||||||| ||| |||||| || |||||| ||||||||||| ||| ||||||||||||| ||||||||||||||| | || ||| ||| | ||||    
T  9429461 attagtatttttatttaatagttagtattatataaatatatttctttttatctcgttttgattaattctattgaaaatat-tatttaaagaacttcgatt 9429363  T
Q  101 atgaatgaattttttgcaaca 121  Q
    || ||| ||||||||||||||    
T  9429362 ataaataaattttttgcaaca 9429342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 15 - 110
Target Start/End: Original strand, 26912345 - 26912440
Alignment:
Q  15 ttagtagttaatactatatagatatatttcttattaactcgttttgattacttctattgaaaatatattttcaaataaccttgattatgaatgaat 110  Q
    |||||||||| ||||||||||||||||||||| |||| ||| |||||||| ||||||| || ||||||||| | ||||| |||||||  |||||||    
T  26912345 ttagtagttagtactatatagatatatttctttttaattcgctttgattaattctattcaagatatatttttagataactttgattacaaatgaat 26912440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 1 - 127
Target Start/End: Complemental strand, 22318788 - 22318663
Alignment:
Q  1 attattatttttacttagtagttaatactatatagatatatttcttattaactcgttttgattacttctattgaaaatatattttcaaataaccttgatt 100  Q
    ||||||||||||| ||||||||||||| ||||||||||| | |||| |||| ||  |||||||| || |||||| |||||||||| | | ||| || |||    
T  22318788 attattatttttatttagtagttaatattatatagatatgtatctt-ttaattccgtttgattaattatattgagaatatatttttagaaaactttaatt 22318690  T
Q  101 atgaatgaattttttgcaacaaaaaat 127  Q
    || ||| ||| ||||||||||||||||    
T  22318689 ataaataaatcttttgcaacaaaaaat 22318663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 2 - 128
Target Start/End: Complemental strand, 21129451 - 21129325
Alignment:
Q  2 ttattatttttacttagtagttaatactatatagatatatttcttattaactcgttttgattacttctattgaaaatatattttcaaataaccttgatta 101  Q
    |||||||| ||| |||||||| | ||| | ||||||||||||||| |||| | | |||||||| ||||||||||||||| |||| | | ||  |||||||    
T  21129451 ttattattcttatttagtagtcactacaaaatagatatatttctttttaatttggtttgattaattctattgaaaatatttttttagagaattttgatta 21129352  T
Q  102 tgaatgaattttttgcaacaaaaaata 128  Q
    | ||| ||| |||||||| ||||||||    
T  21129351 taaattaatcttttgcaataaaaaata 21129325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 57 - 158
Target Start/End: Complemental strand, 1694109 - 1694007
Alignment:
Q  57 tttgattacttctattgaaaatatattttcaaataaccttgattatgaatgaattttttgc-aacaaaaaatacaag-aagaaatacattcaaatgatta 154  Q
    |||||||| |||||||| || |||||||| ||| |||||||||||||||||| |||||| | || ||||||| |||| || |||||||||||||| ||||    
T  1694109 tttgatta-ttctattgtaagtatatttttaaagaaccttgattatgaatgagttttttacaaaaaaaaaatgcaagaaaaaaatacattcaaataatta 1694011  T
Q  155 aaag 158  Q
    ||||    
T  1694010 aaag 1694007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 53 - 127
Target Start/End: Complemental strand, 15133380 - 15133306
Alignment:
Q  53 tcgttttgattacttctattgaaaatatattttcaaataaccttgattatgaatgaattttttgcaacaaaaaat 127  Q
    |||||||||||| ||||||| |||| ||||||| | ||||| |||||||| ||||||| |||| |||||||||||    
T  15133380 tcgttttgattaattctatttaaaaaatatttttagataactttgattataaatgaatattttacaacaaaaaat 15133306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 21292855 - 21292797
Alignment:
Q  1 attattatttttacttagtagttaatactatatagatatatttcttattaactcgtttt 59  Q
    |||||||||||||||||||||||||||  ||||| ||||||||||| ||||||| ||||    
T  21292855 attattatttttacttagtagttaatatcatataaatatatttctttttaactcatttt 21292797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 16 - 134
Target Start/End: Original strand, 26448387 - 26448509
Alignment:
Q  16 tagtagttaatactatatagatat----atttcttattaactcgttttgattacttctattgaaaatatattttcaaataaccttgattatgaatgaatt 111  Q
    ||||||||| ||||||||||||||    ||||||| |||| ||  |||||||| ||||| | ||| |||||||| | | ||| ||||| || |||||||     
T  26448387 tagtagttagtactatatagatatatatatttctttttaattcactttgattaattctactaaaagtatatttttagagaactttgataataaatgaatc 26448486  T
Q  112 ttttgcaacaaaaaatacaagaa 134  Q
    |||||||||||||||| ||||||    
T  26448487 ttttgcaacaaaaaatgcaagaa 26448509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 169 - 206
Target Start/End: Original strand, 35795208 - 35795245
Alignment:
Q  169 atcacatactagtggttaggctcttaggagattagaat 206  Q
    ||||||||||||||||||||||||||||||||||||||    
T  35795208 atcacatactagtggttaggctcttaggagattagaat 35795245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 2 - 134
Target Start/End: Complemental strand, 40351892 - 40351759
Alignment:
Q  2 ttattatttttacttagtagttaatactatatagatatatttcttattaactcgtt-ttgattacttctattgaaaatatattttcaaataaccttgatt 100  Q
    |||||||||||||| |||||||| || |||||||||||| || || || | |  |  ||| ||| |||||||||||||||||||| ||| ||| ||||||    
T  40351892 ttattatttttactcagtagttagtattatatagatataattattttttaattatccttgtttaattctattgaaaatatatttttaaagaactttgatt 40351793  T
Q  101 atgaatgaattttttgcaacaaaaaatacaagaa 134  Q
    || ||| ||| |||  ||||||||||| ||||||    
T  40351792 ataaataaatctttatcaacaaaaaatgcaagaa 40351759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 46 - 126
Target Start/End: Complemental strand, 30095819 - 30095739
Alignment:
Q  46 tattaactcgttttgattacttctattgaaaatatattttcaaataaccttgattatgaatgaattttttgcaacaaaaaa 126  Q
    |||||| ||| ||| |||| |||||||||||| ||||||| | ||||| |||||||| ||||||| |||||||| ||||||    
T  30095819 tattaattcgcttttattaattctattgaaaaaatatttttagataactttgattataaatgaatattttgcaagaaaaaa 30095739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 160 - 207
Target Start/End: Original strand, 33951677 - 33951724
Alignment:
Q  160 gtatgtcatatcacatactagtggttaggctcttaggagattagaatt 207  Q
    |||||||  ||||||||| |||||||||||||||||||||||||||||    
T  33951677 gtatgtcccatcacataccagtggttaggctcttaggagattagaatt 33951724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 160 - 207
Target Start/End: Original strand, 46255599 - 46255646
Alignment:
Q  160 gtatgtcatatcacatactagtggttaggctcttaggagattagaatt 207  Q
    |||||||  ||||||||| |||||||||||||||||||||||||||||    
T  46255599 gtatgtcccatcacataccagtggttaggctcttaggagattagaatt 46255646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 161 - 207
Target Start/End: Complemental strand, 25528502 - 25528456
Alignment:
Q  161 tatgtcatatcacatactagtggttaggctcttaggagattagaatt 207  Q
    |||||| |||||||||  |||||||||||||||||||||||||||||    
T  25528502 tatgtcctatcacataacagtggttaggctcttaggagattagaatt 25528456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 169 - 207
Target Start/End: Complemental strand, 36311484 - 36311446
Alignment:
Q  169 atcacatactagtggttaggctcttaggagattagaatt 207  Q
    |||| ||||||||||||||||||||||||||||||||||    
T  36311484 atcatatactagtggttaggctcttaggagattagaatt 36311446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 36 - 159
Target Start/End: Complemental strand, 48393372 - 48393247
Alignment:
Q  36 atatatttcttattaactcgttttgattacttctattgaaaatatat--tttcaaataaccttgattatgaatgaattttttgcaacaaaaaatacaaga 133  Q
    |||| |||||| |||||| |||| ||||| |||| || |||||||||  ||| | ||||  |||||||| ||| ||| |||  |||||||||||| ||||    
T  48393372 atatttttctttttaacttgtttagattagttctgttaaaaatatatatttttagataattttgattataaataaatctttcacaacaaaaaatataaga 48393273  T
Q  134 agaaatacattcaaatgattaaaaga 159  Q
    ||||| ||||| |||| |||||||||    
T  48393272 agaaagacatttaaataattaaaaga 48393247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 160 - 205
Target Start/End: Original strand, 8166490 - 8166535
Alignment:
Q  160 gtatgtcatatcacatactagtggttaggctcttaggagattagaa 205  Q
    ||||||| |||||||||| ||| |||||||||||||||||||||||    
T  8166490 gtatgtcctatcacataccagtagttaggctcttaggagattagaa 8166535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 32982339 - 32982415
Alignment:
Q  1 attattatttttacttagtagttaatactatatagatatatttcttattaactcgttttgattacttctattgaaaa 77  Q
    |||||||||||||||| |||||||  |   |||| |||||||| || ||||||| ||||||||| ||||||||||||    
T  32982339 attattatttttacttggtagttaggagagtatacatatatttttttttaactcattttgattaattctattgaaaa 32982415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 37996513 - 37996545
Alignment:
Q  1 attattatttttacttagtagttaatactatat 33  Q
    |||||||||||||||||||||||||||||||||    
T  37996513 attattatttttacttagtagttaatactatat 37996545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 69 - 144
Target Start/End: Original strand, 36066184 - 36066258
Alignment:
Q  69 tattgaaaatatattttcaaataaccttgattatgaatgaattttttgcaacaaaaaatacaagaagaaatacatt 144  Q
    ||||||||||||||||| | | ||  |||||||||||| ||| |||| |||| ||||||||||||||||| |||||    
T  36066184 tattgaaaatatatttttagagaattttgattatgaataaatcttttacaac-aaaaatacaagaagaaagacatt 36066258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 159 - 201
Target Start/End: Complemental strand, 14816051 - 14816009
Alignment:
Q  159 agtatgtcatatcacatactagtggttaggctcttaggagatt 201  Q
    |||||||| ||||||||||  ||||||||||||||||||||||    
T  14816051 agtatgtcctatcacataccggtggttaggctcttaggagatt 14816009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 159 - 201
Target Start/End: Complemental strand, 15263046 - 15263004
Alignment:
Q  159 agtatgtcatatcacatactagtggttaggctcttaggagatt 201  Q
    |||||||| ||||||||||  ||||||||||||||||||||||    
T  15263046 agtatgtcctatcacataccggtggttaggctcttaggagatt 15263004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 48 - 125
Target Start/End: Complemental strand, 31329637 - 31329559
Alignment:
Q  48 ttaactcgttttgattacttctattgaaaatatattttcaaataaccttgattatgaatgaat-tttttgcaacaaaaa 125  Q
    |||||| | ||| |||| || ||||||||||||||||| ||| |||||| ||||||||| ||| ||||| |||||||||    
T  31329637 ttaacttgatttcattaattatattgaaaatatatttttaaagaacctttattatgaattaatctttttacaacaaaaa 31329559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 161 - 207
Target Start/End: Original strand, 43458888 - 43458934
Alignment:
Q  161 tatgtcatatcacatactagtggttaggctcttaggagattagaatt 207  Q
    |||||| |||||||||  |||||||||| ||||||||||||||||||    
T  43458888 tatgtcctatcacatagcagtggttaggatcttaggagattagaatt 43458934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 30095885 - 30095845
Alignment:
Q  1 attattatttttacttagtagttaatactatatagatatat 41  Q
    |||||||||||||||||||||||| || |||||| ||||||    
T  30095885 attattatttttacttagtagttattaatatatatatatat 30095845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 77; Significance: 6e-36; HSPs: 36)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 77; E-Value: 6e-36
Query Start/End: Original strand, 1 - 133
Target Start/End: Complemental strand, 13580483 - 13580351
Alignment:
Q  1 attattatttttacttagtagttaatactatatagatatatttcttattaactcgttttgattacttctattgaaaatatattttcaaataaccttgatt 100  Q
    ||||||||||||||||| |||||| || |||||| ||||||||||| |||| ||| |||||||| |||||||||||||||||||| ||||||| ||| ||    
T  13580483 attattatttttacttaatagttagtattatataaatatatttctttttaattcgctttgattaattctattgaaaatatatttttaaataactttggtt 13580384  T
Q  101 atgaatgaattttttgcaacaaaaaatacaaga 133  Q
    || ||||||| |||||||||||||||| |||||    
T  13580383 ataaatgaatattttgcaacaaaaaatgcaaga 13580351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 1 - 122
Target Start/End: Original strand, 22930325 - 22930446
Alignment:
Q  1 attattatttttacttagtagttaatactatatagatatatttcttattaactcgttttgattacttctattgaaaatatattttcaaataaccttgatt 100  Q
    ||||| ||||||||||| |||||| |||||||||||||||| |||| |||| ||| |||||||| |||||||||||| ||||||| | ||||| ||||||    
T  22930325 attataatttttacttaatagttagtactatatagatatatatctttttaattcgctttgattaattctattgaaaaaatatttttagataactttgatt 22930424  T
Q  101 atgaatgaattttttgcaacaa 122  Q
    || ||||||| |||| ||||||    
T  22930425 ataaatgaatattttacaacaa 22930446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 3 - 100
Target Start/End: Original strand, 34142030 - 34142127
Alignment:
Q  3 tattatttttacttagtagttaatactatatagatatatttcttattaactcgttttgattacttctattgaaaatatattttcaaataaccttgatt 100  Q
    ||||||||||| |||||||||| ||||||||||||||||||||| ||||  || |||||||| |||||||||||||||||||||| ||||| ||||||    
T  34142030 tattatttttatttagtagttagtactatatagatatatttctttttaatccgctttgattaattctattgaaaatatattttcagataactttgatt 34142127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 59; E-Value: 3e-25
Query Start/End: Original strand, 1 - 131
Target Start/End: Complemental strand, 26835719 - 26835589
Alignment:
Q  1 attattatttttacttagtagttaatactatatagatatatttcttattaactcgttttgattacttctattgaaaatatattttcaaataaccttgatt 100  Q
    ||||||||||||||||| |||||| ||| ||||| ||||||||||| |||| |   ||| |||| |||||||||||||||||||| | | ||| ||||||    
T  26835719 attattatttttacttaatagttagtacaatataaatatatttctttttaattttcttttattaattctattgaaaatatatttttagagaactttgatt 26835620  T
Q  101 atgaatgaattttttgcaacaaaaaatacaa 131  Q
    || ||||||| || |||||||||||||||||    
T  26835619 ataaatgaatcttgtgcaacaaaaaatacaa 26835589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 59; E-Value: 3e-25
Query Start/End: Original strand, 55 - 149
Target Start/End: Complemental strand, 36042936 - 36042843
Alignment:
Q  55 gttttgattacttctattgaaaatatattttcaaataaccttgattatgaatgaattttttgcaacaaaaaatacaagaagaaatacattcaaat 149  Q
    |||||||||| || |||| |||||||||||| ||| |||||||||||||||| ||||||||||||||||||||||||||||||| | ||||||||    
T  36042936 gttttgattaattttatttaaaatatatttt-aaagaaccttgattatgaattaattttttgcaacaaaaaatacaagaagaaagaaattcaaat 36042843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 29 - 138
Target Start/End: Original strand, 13236214 - 13236323
Alignment:
Q  29 tatatagatatatttcttattaactcgttttgattacttctattgaaaatatattttcaaataaccttgattatgaatgaattttttgcaacaaaaaata 128  Q
    |||||| ||||||||||| |||| ||| |||||||| ||||| |||||||||||||| | | ||| |||||||| || ||||||||||||||||| |||     
T  13236214 tatatatatatatttctttttaattcgctttgattaattctaatgaaaatatatttttagagaactttgattataaacgaattttttgcaacaaataatg 13236313  T
Q  129 caagaagaaa 138  Q
    ||||||||||    
T  13236314 caagaagaaa 13236323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 18 - 138
Target Start/End: Complemental strand, 35481111 - 35480990
Alignment:
Q  18 gtagttaatactatatagatatatttcttattaactcgttttgattacttctattgaaaat-atattttcaaataaccttgattatgaatgaattttttg 116  Q
    ||||||| ||||||||||||| ||||||||||||| || ||| | || ||||||||||||| ||||||| | | ||| |||||||| ||  ||| |||||    
T  35481111 gtagttagtactatatagataaatttcttattaacccgctttcaataattctattgaaaatgatatttttagagaacattgattataaaaaaatcttttg 35481012  T
Q  117 caacaaaaaatacaagaagaaa 138  Q
    ||||||||||||||||||||||    
T  35481011 caacaaaaaatacaagaagaaa 35480990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 28376661 - 28376724
Alignment:
Q  1 attattatttttacttagtagttaatactatatagatatatttcttattaactcgttttgatta 64  Q
    |||||||||||||||||||||||| ||||||||||||||||||||| |||| ||||||||||||    
T  28376661 attattatttttacttagtagttagtactatatagatatatttctttttaattcgttttgatta 28376724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 58 - 157
Target Start/End: Original strand, 41849442 - 41849540
Alignment:
Q  58 ttgattacttctattgaaaatatattttcaaataaccttgattatgaatgaattttttgcaacaaaaaatacaagaagaaatacattcaaatgattaaaa 157  Q
    ||||||| |||||||||||||||||||| ||| || ||||||||| ||||||| |||| |||||||||| |||| |||||| |||||||||| |||||||    
T  41849442 ttgattaattctattgaaaatatatttttaaagaatcttgattattaatgaatctttttcaacaaaaaa-acaaaaagaaagacattcaaataattaaaa 41849540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 34 - 138
Target Start/End: Original strand, 43872544 - 43872648
Alignment:
Q  34 agatatatttcttattaactcgttttgattacttctattgaaaatatattttcaaataaccttgattatgaatgaattttttgcaacaaaaaatacaaga 133  Q
    ||||||||||||| |||| | | ||| |||| |||||||| ||||||||||| ||| ||| |||||||| ||||||| || ||||||||||||||||| |    
T  43872544 agatatatttcttcttaatttgctttcattaattctattgtaaatatatttttaaagaactttgattataaatgaatcttgtgcaacaaaaaatacaaaa 43872643  T
Q  134 agaaa 138  Q
    |||||    
T  43872644 agaaa 43872648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 158
Target Start/End: Complemental strand, 4350796 - 4350632
Alignment:
Q  1 attattatttttacttagtagttaatactatatagatatatt---tcttattaactcgttttgattacttctattgaaaatatattttcaaataaccttg 97  Q
    ||||||||||||| |||||||||| || ||||||||||||||   | || |||| ||| |||| ||| |||||||||||||||||||| | ||||| |||    
T  4350796 attattatttttatttagtagttagtattatatagatatattatttttttttaattcgctttggttaattctattgaaaatatatttttatataactttg 4350697  T
Q  98 attatgaat----gaattttttgcaacaaaaaatacaagaagaaatacattcaaatgattaaaag 158  Q
    |||||  ||    |||| |||| ||||||||||| |||||| ||| | ||| |||| ||||||||    
T  4350696 attatatataaacgaatatttttcaacaaaaaatgcaagaaaaaaaatattaaaataattaaaag 4350632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 134
Target Start/End: Complemental strand, 40620765 - 40620633
Alignment:
Q  1 attattatttttacttagtagttaatactatatagatatatttcttattaactcgttttgattacttctattgaaaatatattttcaaataaccttgatt 100  Q
    |||||||||||||||||||||  ||||||||||| ||||||   || |||||||||| ||| || || |||||| ||| |||||| ||| ||| ||| |     
T  40620765 attattatttttacttagtagaaaatactatatacatatataattttttaactcgttctgaataattttattgagaatttatttt-aaagaactttggtc 40620667  T
Q  101 atgaatgaattttttgcaacaaaaaatacaagaa 134  Q
    |||||||| | ||||| |||||||||||||||||    
T  40620666 atgaatgagtcttttgtaacaaaaaatacaagaa 40620633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 1 - 125
Target Start/End: Complemental strand, 22486720 - 22486596
Alignment:
Q  1 attattatttttacttagtagttaatactatatagatatatttcttattaactcgttttgattacttctattgaaaatatattttcaaataaccttgatt 100  Q
    ||||||||| |||||||||||| | ||| | |||||||| |||||| |||| | |||||||||| |||||||||||||||  ||| | | ||| ||||||    
T  22486720 attattattcttacttagtagtcactacaaaatagatatgtttctttttaatttgttttgattaattctattgaaaatatcattttagagaactttgatt 22486621  T
Q  101 atgaatgaattttttgcaacaaaaa 125  Q
    || ||||||| || ||||| |||||    
T  22486620 ataaatgaatcttgtgcaaaaaaaa 22486596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 134
Target Start/End: Original strand, 9191204 - 9191331
Alignment:
Q  1 attattatttttacttagtagttaatactatatagatatatttcttattaactcgttttgattacttctattgaaaatatattttcaaataaccttgatt 100  Q
    ||||||||||||||||||||||||      ||||||||||||| || |||| ||  |||||||| ||||||| |||||||||||| | | |||  |||||    
T  9191204 attattatttttacttagtagtta------tatagatatatttatttttaattcactttgattaattctattcaaaatatatttttagagaactatgatt 9191297  T
Q  101 atgaatgaattttttgcaacaaaaaatacaagaa 134  Q
    || ||||||| |||| ||||||| ||| ||||||    
T  9191298 ataaatgaatcttttacaacaaataatgcaagaa 9191331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 1 - 134
Target Start/End: Original strand, 12181827 - 12181956
Alignment:
Q  1 attattatttttacttagtagttaatactatatagatatatttcttattaactcgttttgattacttctattgaaaatatattttcaaataaccttgatt 100  Q
    |||||||||||||||||||| ||| || |||||||| ||||||   ||||| | | ||||| || || |||||| || ||||||| | | ||  ||||||    
T  12181827 attattatttttacttagtaattagtattatatagaaatattt---attaaattgctttgactaattatattgacaa-atatttttagagaattttgatt 12181922  T
Q  101 atgaatgaattttttgcaacaaaaaatacaagaa 134  Q
    |||||||||| |||||||||||||| ||||||||    
T  12181923 atgaatgaatattttgcaacaaaaagtacaagaa 12181956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 1 - 134
Target Start/End: Original strand, 12426255 - 12426384
Alignment:
Q  1 attattatttttacttagtagttaatactatatagatatatttcttattaactcgttttgattacttctattgaaaatatattttcaaataaccttgatt 100  Q
    |||||||||||||||||||| ||| || |||||||| ||||||   ||||| | | ||||| || || |||||| || ||||||| | | ||  ||||||    
T  12426255 attattatttttacttagtaattagtattatatagaaatattt---attaaattgctttgactaattatattgacaa-atatttttagagaattttgatt 12426350  T
Q  101 atgaatgaattttttgcaacaaaaaatacaagaa 134  Q
    |||||||||| |||||||||||||| ||||||||    
T  12426351 atgaatgaatattttgcaacaaaaagtacaagaa 12426384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 36 - 123
Target Start/End: Original strand, 28310231 - 28310317
Alignment:
Q  36 atatatttcttattaactcgttttgattacttctattgaaaatatattttcaaataaccttgattatgaatgaattttttgcaacaaa 123  Q
    ||||||| ||| ||||||||||||||||| |||||||||||| || | || ||| ||||||  ||||||||| |||||||||||||||    
T  28310231 atatattactttttaactcgttttgattaattctattgaaaaaat-tatttaaagaaccttatttatgaatggattttttgcaacaaa 28310317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 57 - 131
Target Start/End: Complemental strand, 21347573 - 21347499
Alignment:
Q  57 tttgattacttctattgaaaatatattttcaaataaccttgattatgaatgaattttttgcaacaaaaaatacaa 131  Q
    |||||||| |||||||||||||||||||| ||||||  |||||||| ||||||| || |||||  ||||||||||    
T  21347573 tttgattaattctattgaaaatatatttttaaataaatttgattataaatgaatcttgtgcaatcaaaaatacaa 21347499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 48 - 158
Target Start/End: Complemental strand, 39295583 - 39295474
Alignment:
Q  48 ttaactcgttttgattacttctattgaaaatatattttcaaataaccttgattatgaatgaattttttgcaacaaaaaatacaagaagaaatacattcaa 147  Q
    |||||||  |||||||  |||||||||||||| ||||| | | |||||| ||||  |||| ||||||||||||||||| |||| ||||||| |||||| |    
T  39295583 ttaactcactttgattgattctattgaaaatacatttttagaaaacctt-attacaaatggattttttgcaacaaaaattacatgaagaaacacattcga 39295485  T
Q  148 atgattaaaag 158  Q
    || ||||||||    
T  39295484 ataattaaaag 39295474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 69 - 158
Target Start/End: Original strand, 9052948 - 9053037
Alignment:
Q  69 tattgaaaatatattttcaaataaccttgattatgaatgaattttttgcaacaaaaaatacaagaagaaatacattcaaatgattaaaag 158  Q
    |||||||||||||| || | | |||||||||||||||||| | |||| |||||||||||   | |||||||||||| |||| ||||||||    
T  9052948 tattgaaaatatatatttagagaaccttgattatgaatgattcttttacaacaaaaaatgtgaaaagaaatacatttaaataattaaaag 9053037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 160 - 207
Target Start/End: Complemental strand, 8239382 - 8239335
Alignment:
Q  160 gtatgtcatatcacatactagtggttaggctcttaggagattagaatt 207  Q
    |||||||  ||||||||| |||||||||||||||||||||||||||||    
T  8239382 gtatgtcccatcacataccagtggttaggctcttaggagattagaatt 8239335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 48 - 138
Target Start/End: Original strand, 31277939 - 31278030
Alignment:
Q  48 ttaactcgttttgattacttctattgaaaatatat-tttcaaataaccttgattatgaatgaattttttgcaacaaaaaatacaagaagaaa 138  Q
    |||||||  |||||||| ||||||||||||||| | ||| | | |||||||||||| ||||||| ||||||| | |||||| ||||||||||    
T  31277939 ttaactcactttgattaattctattgaaaatatttattttagagaaccttgattataaatgaatcttttgcacctaaaaattcaagaagaaa 31278030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 160 - 207
Target Start/End: Complemental strand, 31700423 - 31700376
Alignment:
Q  160 gtatgtcatatcacatactagtggttaggctcttaggagattagaatt 207  Q
    ||||||| |||||||||| |||||||||| ||||||||||||||||||    
T  31700423 gtatgtcctatcacataccagtggttaggatcttaggagattagaatt 31700376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 160 - 207
Target Start/End: Complemental strand, 39259697 - 39259650
Alignment:
Q  160 gtatgtcatatcacatactagtggttaggctcttaggagattagaatt 207  Q
    |||||||  ||||||||| |||||||||||||||||||||||||||||    
T  39259697 gtatgtcccatcacataccagtggttaggctcttaggagattagaatt 39259650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 160 - 207
Target Start/End: Complemental strand, 40104644 - 40104597
Alignment:
Q  160 gtatgtcatatcacatactagtggttaggctcttaggagattagaatt 207  Q
    |||||||  ||||||||| |||||||||||||||||||||||||||||    
T  40104644 gtatgtcccatcacataccagtggttaggctcttaggagattagaatt 40104597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 169 - 207
Target Start/End: Original strand, 11076937 - 11076975
Alignment:
Q  169 atcacatactagtggttaggctcttaggagattagaatt 207  Q
    ||||||||| |||||||||||||||||||||||||||||    
T  11076937 atcacataccagtggttaggctcttaggagattagaatt 11076975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 161 - 207
Target Start/End: Complemental strand, 23143521 - 23143475
Alignment:
Q  161 tatgtcatatcacatactagtggttaggctcttaggagattagaatt 207  Q
    |||||| |||||||||  |||||||||||||||||||||||||||||    
T  23143521 tatgtcctatcacatagcagtggttaggctcttaggagattagaatt 23143475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 161 - 207
Target Start/End: Original strand, 28249487 - 28249533
Alignment:
Q  161 tatgtcatatcacatactagtggttaggctcttaggagattagaatt 207  Q
    ||||||||||||||||  ||||||||||||||||||| |||||||||    
T  28249487 tatgtcatatcacatagcagtggttaggctcttaggaaattagaatt 28249533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 130
Target Start/End: Original strand, 31383478 - 31383607
Alignment:
Q  1 attattatttttacttagtagttaatactatatagatatatttcttattaactcgttttgattacttctattgaaaatatattttcaaataaccttgatt 100  Q
    |||||||||||| |||| ||||||||| ||||||  |||| || || |||| |   ||| |||| || ||||||||||||  ||| |  |||| |||| |    
T  31383478 attattattttttcttaatagttaatattatataagtataattatttttaatttcctttaattaattttattgaaaatatggttttagctaactttgaat 31383577  T
Q  101 atgaatgaattttttgcaacaaaaaataca 130  Q
    |||||||||| ||||||||| |||||||||    
T  31383578 atgaatgaatcttttgcaacgaaaaataca 31383607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 43872482 - 43872523
Alignment:
Q  1 attattatttttacttagtagttaatactatatagatatatt 42  Q
    |||||||||||||||||||||| ||||| |||||||||||||    
T  43872482 attattatttttacttagtagtcaatacaatatagatatatt 43872523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 31 - 126
Target Start/End: Complemental strand, 17786603 - 17786508
Alignment:
Q  31 tatagatatatttcttattaactcgttttgattacttctattgaaaatatattttcaaataaccttgattatgaatgaattttttgcaacaaaaaa 126  Q
    |||| ||||||||||| |||||||| |||||||| |  |||| ||||| ||||||   | ||  |||||||||||| ||| |||||||||||||||    
T  17786603 tatacatatatttctttttaactcgctttgattaatcatattaaaaatctatttttgtagaattttgattatgaataaatattttgcaacaaaaaa 17786508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 161 - 207
Target Start/End: Complemental strand, 13545648 - 13545602
Alignment:
Q  161 tatgtcatatcacatactagtggttaggctcttaggagattagaatt 207  Q
    |||||| |||||||||  |||||||||| ||||||||||||||||||    
T  13545648 tatgtcctatcacatagcagtggttaggatcttaggagattagaatt 13545602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 161 - 207
Target Start/End: Original strand, 13678825 - 13678871
Alignment:
Q  161 tatgtcatatcacatactagtggttaggctcttaggagattagaatt 207  Q
    |||||| |||||||||  |||||||||| ||||||||||||||||||    
T  13678825 tatgtcctatcacatagcagtggttaggatcttaggagattagaatt 13678871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 161 - 207
Target Start/End: Original strand, 20092620 - 20092666
Alignment:
Q  161 tatgtcatatcacatactagtggttaggctcttaggagattagaatt 207  Q
    |||||| |||||||||  |||||||||| ||||||||||||||||||    
T  20092620 tatgtcctatcacatagcagtggttaggatcttaggagattagaatt 20092666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 7 - 85
Target Start/End: Original strand, 32036759 - 32036837
Alignment:
Q  7 atttttacttagtagttaatactatatagatatatttcttattaactcgttttgattacttctattgaaaatatatttt 85  Q
    |||||||||||||||| | |  | || | ||||||||||| ||||||||||| ||||| || ||||||||||| |||||    
T  32036759 atttttacttagtagtgagtgttttacaaatatatttctttttaactcgtttggattaattatattgaaaatagatttt 32036837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 161 - 207
Target Start/End: Complemental strand, 43097920 - 43097874
Alignment:
Q  161 tatgtcatatcacatactagtggttaggctcttaggagattagaatt 207  Q
    |||||| |||||||||  |||||||||||||||||||||| ||||||    
T  43097920 tatgtcctatcacataacagtggttaggctcttaggagataagaatt 43097874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0777 (Bit Score: 74; Significance: 4e-34; HSPs: 1)
Name: scaffold0777
Description:

Target: scaffold0777; HSP #1
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 1 - 158
Target Start/End: Original strand, 5850 - 6006
Alignment:
Q  1 attattatttttacttagtagttaatactatatagatatatttcttattaactcgttttgattacttctattgaaaatatattttcaaataaccttgatt 100  Q
    ||||||||||||| | |||||||| ||||| |||||||||||||||  ||| | | |||||||| || |||||||||||| |||| ||| ||  ||||||    
T  5850 attattattttta-tgagtagttagtactacatagatatatttctttctaaattgctttgattaattatattgaaaatatgtttttaaagaattttgatt 5948  T
Q  101 atgaatgaattttttgcaacaaaaaatacaagaagaaatacattcaaatgattaaaag 158  Q
    ||||||||||||||||||| |||||||||| ||||||| |||||||||| ||||||||    
T  5949 atgaatgaattttttgcaataaaaaatacatgaagaaagacattcaaataattaaaag 6006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 74; Significance: 4e-34; HSPs: 35)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 1 - 158
Target Start/End: Complemental strand, 3193647 - 3193490
Alignment:
Q  1 attattatttttacttagtagttaatactatatagatatatttcttattaactcgttttgattacttctattgaaaatatattttcaaataaccttgatt 100  Q
    |||||||||||||  |||||| || ||||| ||||||||||||||| |||| | | ||||| || || |||||||||||| |||| ||| ||| ||||||    
T  3193647 attattatttttatgtagtaggtagtactacatagatatatttctttttaaattgctttgaataattatattgaaaatatgtttttaaagaactttgatt 3193548  T
Q  101 atgaatgaattttttgcaacaaaaaatacaagaagaaatacattcaaatgattaaaag 158  Q
    |||||||||| |||||||| ||||||| |||||||||| |||||||||| ||||||||    
T  3193547 atgaatgaatcttttgcaataaaaaatgcaagaagaaagacattcaaataattaaaag 3193490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 71; E-Value: 2e-32
Query Start/End: Original strand, 1 - 159
Target Start/End: Original strand, 502809 - 502960
Alignment:
Q  1 attattatttttacttagtagttaatactatatagatatatttcttattaactcgttttgattacttctattgaaaatatattttcaaataaccttgatt 100  Q
    |||||||||||||||||| ||||| || |||||||||||||||||| |||||||  |||||||| |||||||||||||||||||| | | ||| ||||||    
T  502809 attattatttttacttag-agttagtattatatagatatatttctttttaactc--tttgattaattctattgaaaatatatttttagagaactttgatt 502905  T
Q  101 atgaatgaattttttgcaacaaaaaatacaagaagaaatacattcaaatgattaaaaga 159  Q
    |||||||||| |||||||| |||||| | ||||||    |||||||||| |||||||||    
T  502906 atgaatgaatcttttgcaaaaaaaaaaaaaagaag----acattcaaataattaaaaga 502960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 4 - 134
Target Start/End: Complemental strand, 32257807 - 32257677
Alignment:
Q  4 attatttttacttagtagttaatactatatagatatatttcttattaactcgttttgattacttctattgaaaatatattttcaaataaccttgattatg 103  Q
    ||||||||||||||||||||| || || |||||||||||| || |||| | | |||||||| || ||||||||||||| ||| | | ||| ||||||||     
T  32257807 attatttttacttagtagttagtattacatagatatatttttttttaatttgctttgattaattttattgaaaatatacttttagagaactttgattata 32257708  T
Q  104 aatgaattttttgcaacaaaaaatacaagaa 134  Q
    |||||||||| || |||||||||| ||||||    
T  32257707 aatgaattttgtgtaacaaaaaatgcaagaa 32257677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 1 - 134
Target Start/End: Complemental strand, 12263773 - 12263638
Alignment:
Q  1 attattatttttacttagtagttaatactatatagatatatttcttatt--aactcgttttgattacttctattgaaaatatattttcaaataaccttga 98  Q
    ||||||||||||||||| | |||| |||||||||||||| ||| || ||  || ||| |||||||| |||||||||||||||||||| ||| ||| ||||    
T  12263773 attattatttttacttaatggttagtactatatagatatttttttttttttaattcgctttgattaattctattgaaaatatatttttaaagaactttga 12263674  T
Q  99 ttatgaatgaattttttgcaacaaaaaatacaagaa 134  Q
    ||||  |||||| |||||||| |||| || ||||||    
T  12263673 ttatagatgaatcttttgcaataaaagatgcaagaa 12263638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 1 - 134
Target Start/End: Original strand, 20870638 - 20870767
Alignment:
Q  1 attattatttttacttagtagttaatactatatagatatatttcttattaactcgttttgattacttctattgaaaatatattttcaaataaccttgatt 100  Q
    ||||||||||||| |||||||||| |||||||||    |||||||| |||| ||  |||||||| || |||||| |||||||||| | ||||| ||||||    
T  20870638 attattatttttatttagtagttagtactatata----tatttctttttaattccctttgattaattttattgataatatatttttagataactttgatt 20870733  T
Q  101 atgaatgaattttttgcaacaaaaaatacaagaa 134  Q
    || ||||||| || ||||||||||||| ||||||    
T  20870734 ataaatgaatattctgcaacaaaaaatgcaagaa 20870767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 1 - 144
Target Start/End: Complemental strand, 16569425 - 16569284
Alignment:
Q  1 attattatttttacttagtagttaatactatatagatatatttcttattaactcgttttgattacttctattgaaaatatattttcaaataaccttgatt 100  Q
    ||||||||||||||||||||| ||||| ||||||| |||||||||| |||||||   ||  ||| ||||||||||||||| |||| | | |||||||| |    
T  16569425 attattatttttacttagtaggtaatattatataggtatatttctttttaactcccatttgttaattctattgaaaatatgtttttagaaaaccttgaat 16569326  T
Q  101 atgaatgaattttttgcaacaaaaaatacaagaagaaatacatt 144  Q
    || ||| ||| | |||||  ||||||| |||||||||| |||||    
T  16569325 ataaataaatctattgca--aaaaaatgcaagaagaaagacatt 16569284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 1 - 127
Target Start/End: Complemental strand, 16570621 - 16570495
Alignment:
Q  1 attattatttttacttagtagttaatactatatagatatatttcttattaactcgttttgattacttctattgaaaatatattttcaaataaccttgatt 100  Q
    ||||||||||||||||| |||||  ||| ||||||||||||||||| |||| ||  |||||||| ||||||| |||||||||||| | | ||| ||||||    
T  16570621 attattatttttacttattagttggtaccatatagatatatttctttttaattcactttgattaattctattaaaaatatatttttagagaactttgatt 16570522  T
Q  101 atgaatgaattttttgcaacaaaaaat 127  Q
    |  ||| ||| |||||| ||| |||||    
T  16570521 aaaaattaatcttttgccacagaaaat 16570495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 138
Target Start/End: Complemental strand, 25034477 - 25034341
Alignment:
Q  1 attattatttttacttagtagttaatactatatagatatatttcttattaactcgttttgattacttctattgaaaatatattttcaaataaccttgatt 100  Q
    ||||||||||||| | | |||||||  ||||||||||||||||||| |||| | | |||||||| || |||| ||||| |||||| | | ||| || ||     
T  25034477 attattatttttattcaatagttaacgctatatagatatatttctt-ttaaattggtttgattaattgtattaaaaatgtatttttagaaaactttaata 25034379  T
Q  101 atgaatgaattttttgcaacaaaaaatacaagaagaaa 138  Q
    || ||||||||||||||||||||||||  |||||||||    
T  25034378 ataaatgaattttttgcaacaaaaaatgtaagaagaaa 25034341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 26 - 134
Target Start/End: Original strand, 18626687 - 18626795
Alignment:
Q  26 tactatatagatatatttcttattaactcgttttgattacttctattgaaaatatattttcaaataaccttgattatgaatgaattttttgcaacaaaaa 125  Q
    |||| |||||||||||||||| |||  | |||||||||| |||||||||| | |||||||   | ||| |||||||| ||||||| || |||||||||||    
T  18626687 tactgtatagatatatttctttttactttgttttgattaattctattgaagaaatattttttgagaactttgattataaatgaatcttgtgcaacaaaaa 18626786  T
Q  126 atacaagaa 134  Q
    |||||||||    
T  18626787 atacaagaa 18626795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 55 - 134
Target Start/End: Complemental strand, 37147927 - 37147848
Alignment:
Q  55 gttttgattacttctattgaaaatatattttcaaataaccttgattatgaatgaattttttgcaacaaaaaatacaagaa 134  Q
    |||||||||| || ||||||||||||||||| ||| |||||| ||||| ||||||| |||| ||| ||||||||||||||    
T  37147927 gttttgattaattgtattgaaaatatatttttaaaaaaccttaattataaatgaatattttacaagaaaaaatacaagaa 37147848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 161 - 207
Target Start/End: Complemental strand, 9714692 - 9714646
Alignment:
Q  161 tatgtcatatcacatactagtggttaggctcttaggagattagaatt 207  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||    
T  9714692 tatgtcatatcacatagtagtggttaggctcttaggagattagaatt 9714646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 158
Target Start/End: Original strand, 39542414 - 39542569
Alignment:
Q  1 attattatttttacttagtagttaatactatatagatatatttcttattaactcgttttgattacttctattgaaaatatattttcaaataaccttgatt 100  Q
    |||||||||||||| ||||||||| ||||||||  |||||| | || ||||  ||| || |||  || |||||||||||| |||| ||| ||| ||||||    
T  39542414 attattatttttacgtagtagttagtactatatgaatatatatttt-ttaaagcgtgtttattgattatattgaaaatatgtttttaaagaactttgatt 39542512  T
Q  101 atgaatgaattttttgcaacaaaaaatacaagaagaaatacattcaaatgattaaaag 158  Q
    |||||| ||  |||| ||| ||||||| |||||||||| ||||||| || ||||||||    
T  39542513 atgaat-aaacttttacaataaaaaatgcaagaagaaagacattcatataattaaaag 39542569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 85
Target Start/End: Complemental strand, 3597037 - 3596953
Alignment:
Q  1 attattatttttacttagtagttaatactatatagatatatttcttattaactcgttttgattacttctattgaaaatatatttt 85  Q
    ||||||||||||| |||||| ||| || |||   |||||||||||| |||| |||||||||||| ||||||| ||||||||||||    
T  3597037 attattatttttatttagtaattagtattattgtgatatatttctttttaattcgttttgattaattctattaaaaatatatttt 3596953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 1 - 134
Target Start/End: Original strand, 36161048 - 36161177
Alignment:
Q  1 attattatttttacttagtagttaatactatatagatatatttcttattaactcgttttgattacttctattgaaaatatattttcaaataaccttgatt 100  Q
    |||||||||||||  |||||||||||| ||||||||||| ||| |||   | |  ||||||||| || |||||||||||| |||| ||| ||| |||||     
T  36161048 attattatttttatgtagtagttaatattatatagatatttttttta---aattattttgattaattatattgaaaatatgtttt-aaaaaactttgatc 36161143  T
Q  101 atgaatgaattttttgcaacaaaaaatacaagaa 134  Q
    |||||||||| ||||| || |||||||| |||||    
T  36161144 atgaatgaatcttttgtaataaaaaatataagaa 36161177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 36 - 126
Target Start/End: Complemental strand, 7886702 - 7886612
Alignment:
Q  36 atatatttcttattaactcgttttgattacttctattgaaaatatattttcaaataaccttgattatgaatgaattttttgcaacaaaaaa 126  Q
    |||| |||||| |||| ||| |||||||| ||||||||||||||||| || | ||||| |||||||| | ||||| ||||| |||||||||    
T  7886702 atatgtttctttttaattcgctttgattaattctattgaaaatatatgtttagataactttgattataagtgaatattttggaacaaaaaa 7886612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 7887312 - 7887267
Alignment:
Q  1 attattatttttacttagtagttaatactatatagatatatttctt 46  Q
    |||||||||||||||||||||||| |||||||||||||| ||||||    
T  7887312 attattatttttacttagtagttagtactatatagatatgtttctt 7887267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 160 - 207
Target Start/End: Complemental strand, 8298645 - 8298598
Alignment:
Q  160 gtatgtcatatcacatactagtggttaggctcttaggagattagaatt 207  Q
    |||||||  ||||||||| |||||||||||||||||||||||||||||    
T  8298645 gtatgtcccatcacataccagtggttaggctcttaggagattagaatt 8298598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 160 - 207
Target Start/End: Original strand, 8735437 - 8735484
Alignment:
Q  160 gtatgtcatatcacatactagtggttaggctcttaggagattagaatt 207  Q
    |||||||  ||||||||| |||||||||||||||||||||||||||||    
T  8735437 gtatgtcccatcacataccagtggttaggctcttaggagattagaatt 8735484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 160 - 207
Target Start/End: Original strand, 18809713 - 18809760
Alignment:
Q  160 gtatgtcatatcacatactagtggttaggctcttaggagattagaatt 207  Q
    |||||||  ||||||||| |||||||||||||||||||||||||||||    
T  18809713 gtatgtccaatcacataccagtggttaggctcttaggagattagaatt 18809760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 160 - 207
Target Start/End: Complemental strand, 20336887 - 20336840
Alignment:
Q  160 gtatgtcatatcacatactagtggttaggctcttaggagattagaatt 207  Q
    ||||||| |||||||||||||||||||| ||||| |||||||||||||    
T  20336887 gtatgtcctatcacatactagtggttagactcttgggagattagaatt 20336840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 160 - 207
Target Start/End: Complemental strand, 38678858 - 38678811
Alignment:
Q  160 gtatgtcatatcacatactagtggttaggctcttaggagattagaatt 207  Q
    |||||||  ||||||||| |||||||||||||||||||||||||||||    
T  38678858 gtatgtcccatcacataccagtggttaggctcttaggagattagaatt 38678811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 169 - 207
Target Start/End: Original strand, 12724431 - 12724469
Alignment:
Q  169 atcacatactagtggttaggctcttaggagattagaatt 207  Q
    ||||||||| |||||||||||||||||||||||||||||    
T  12724431 atcacataccagtggttaggctcttaggagattagaatt 12724469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 169 - 207
Target Start/End: Original strand, 12785914 - 12785952
Alignment:
Q  169 atcacatactagtggttaggctcttaggagattagaatt 207  Q
    ||||||||| |||||||||||||||||||||||||||||    
T  12785914 atcacataccagtggttaggctcttaggagattagaatt 12785952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 169 - 207
Target Start/End: Complemental strand, 16512976 - 16512938
Alignment:
Q  169 atcacatactagtggttaggctcttaggagattagaatt 207  Q
    ||||||||| |||||||||||||||||||||||||||||    
T  16512976 atcacataccagtggttaggctcttaggagattagaatt 16512938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 161 - 207
Target Start/End: Complemental strand, 25976530 - 25976484
Alignment:
Q  161 tatgtcatatcacatactagtggttaggctcttaggagattagaatt 207  Q
    |||||| |||||||||| ||| |||||||||||||||||||||||||    
T  25976530 tatgtcctatcacatacaagtagttaggctcttaggagattagaatt 25976484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 161 - 207
Target Start/End: Original strand, 26279799 - 26279845
Alignment:
Q  161 tatgtcatatcacatactagtggttaggctcttaggagattagaatt 207  Q
    |||||| |||||||||  |||||||||||||||||||||||||||||    
T  26279799 tatgtcctatcacatagcagtggttaggctcttaggagattagaatt 26279845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 160 - 205
Target Start/End: Original strand, 37013538 - 37013583
Alignment:
Q  160 gtatgtcatatcacatactagtggttaggctcttaggagattagaa 205  Q
    ||||||| ||||||||||  ||||||||||||||||||||||||||    
T  37013538 gtatgtcctatcacataccggtggttaggctcttaggagattagaa 37013583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 160 - 207
Target Start/End: Original strand, 3557365 - 3557412
Alignment:
Q  160 gtatgtcatatcacatactagtggttaggctcttaggagattagaatt 207  Q
    |||||||  ||||||||| |||||||||||||||| ||||||||||||    
T  3557365 gtatgtcccatcacataccagtggttaggctcttaagagattagaatt 3557412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 169 - 207
Target Start/End: Complemental strand, 13821472 - 13821434
Alignment:
Q  169 atcacatactagtggttaggctcttaggagattagaatt 207  Q
    ||||| ||| |||||||||||||||||||||||||||||    
T  13821472 atcacgtaccagtggttaggctcttaggagattagaatt 13821434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 98 - 156
Target Start/End: Original strand, 18600482 - 18600540
Alignment:
Q  98 attatgaatgaattttttgcaacaaaaaatacaagaagaaatacattcaaatgattaaa 156  Q
    ||||||||||| | |||||||| |||||||||||||||||| |  ||||||| ||||||    
T  18600482 attatgaatgattcttttgcaataaaaaatacaagaagaaagatgttcaaataattaaa 18600540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 160 - 205
Target Start/End: Original strand, 17504392 - 17504437
Alignment:
Q  160 gtatgtcatatcacatactagtggttaggctcttaggagattagaa 205  Q
    ||||||| ||||||||||   |||||||||||||||||||||||||    
T  17504392 gtatgtcctatcacatacctctggttaggctcttaggagattagaa 17504437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 159 - 207
Target Start/End: Original strand, 8198123 - 8198171
Alignment:
Q  159 agtatgtcatatcacatactagtggttaggctcttaggagattagaatt 207  Q
    ||||||||  ||||||||| ||||||||| ||||| |||||||||||||    
T  8198123 agtatgtcccatcacataccagtggttagactcttgggagattagaatt 8198171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 46 - 126
Target Start/End: Complemental strand, 10325683 - 10325603
Alignment:
Q  46 tattaactcgttttgattacttctattgaaaatatattttcaaataaccttgattatgaatgaattttttgcaacaaaaaa 126  Q
    |||||| ||| |||||||| || |||||| |||| ||||| | | ||| ||||| || ||||||| |||||||||||||||    
T  10325683 tattaattcggtttgattaattatattgagaatacatttttagaaaactttgatcataaatgaatcttttgcaacaaaaaa 10325603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 10325757 - 10325717
Alignment:
Q  1 attattatttttacttagtagttaatactatatagatatat 41  Q
    ||||||||||||||||||| |||| ||||||||| ||||||    
T  10325757 attattatttttacttagttgttagtactatatatatatat 10325717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 161 - 205
Target Start/End: Original strand, 37884185 - 37884229
Alignment:
Q  161 tatgtcatatcacatactagtggttaggctcttaggagattagaa 205  Q
    |||||| |||||||||  |||||||||||||||| ||||||||||    
T  37884185 tatgtcctatcacatagcagtggttaggctcttacgagattagaa 37884229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 74; Significance: 4e-34; HSPs: 26)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 1 - 134
Target Start/End: Original strand, 15670922 - 15671055
Alignment:
Q  1 attattatttttacttagtagttaatactatatagatatatttcttattaactcgttttgattacttctattgaaaatatattttcaaataaccttgatt 100  Q
    |||||||||||||||||||||||| ||| ||||||||||||||||| |||| | |||||||||| ||||||||||||||| |||| | | ||| ||||||    
T  15670922 attattatttttacttagtagttattacaatatagatatatttctttttaatttgttttgattaattctattgaaaatatctttttagaaaactttgatt 15671021  T
Q  101 atgaatgaattttttgcaacaaaaaatacaagaa 134  Q
    || ||||||| || |||||||||| |||||||||    
T  15671022 ataaatgaatcttgtgcaacaaaatatacaagaa 15671055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 71; E-Value: 2e-32
Query Start/End: Original strand, 1 - 127
Target Start/End: Complemental strand, 33510222 - 33510096
Alignment:
Q  1 attattatttttacttagtagttaatactatatagatatatttcttattaactcgttttgattacttctattgaaaatatattttcaaataaccttgatt 100  Q
    |||||||||||||||||||||||| | ||| ||||||||||||||| |||| |||||||||||| ||| |||||||||||||||| | | ||| || |||    
T  33510222 attattatttttacttagtagttagtgctacatagatatatttctttttaattcgttttgattaattccattgaaaatatatttttagagaactttaatt 33510123  T
Q  101 atgaatgaattttttgcaacaaaaaat 127  Q
    || ||||||| ||||||||||||||||    
T  33510122 ataaatgaatcttttgcaacaaaaaat 33510096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 1 - 115
Target Start/End: Original strand, 2758079 - 2758193
Alignment:
Q  1 attattatttttacttagtagttaatactatatagatatatttcttattaactcgttttgattacttctattgaaaatatattttcaaataaccttgatt 100  Q
    ||||||||||||| |||||||||| ||||||||| | ||||||||| |||||| |||||||||| ||||| |||| ||||||||| | ||||||||| ||    
T  2758079 attattatttttaattagtagttagtactatataaacatatttctttttaactagttttgattatttctaatgaatatatatttttacataaccttggtt 2758178  T
Q  101 atgaatgaatttttt 115  Q
    |||||||||| ||||    
T  2758179 atgaatgaatctttt 2758193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 59; E-Value: 3e-25
Query Start/End: Original strand, 32 - 134
Target Start/End: Complemental strand, 27538879 - 27538777
Alignment:
Q  32 atagatatatttcttattaactcgttttgattacttctattgaaaatatattttcaaataaccttgattatgaatgaattttttgcaacaaaaaatacaa 131  Q
    |||||||||||| || |||| ||  |||||||| |||||||||||||||||||| ||||||| |||||||  ||||||| ||||||||||||||||||||    
T  27538879 atagatatatttatttttaattctctttgattaattctattgaaaatatatttttaaataactttgattagaaatgaatattttgcaacaaaaaatacaa 27538780  T
Q  132 gaa 134  Q
    |||    
T  27538779 gaa 27538777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 8 - 158
Target Start/End: Complemental strand, 33682780 - 33682630
Alignment:
Q  8 tttttacttagtagttaatactatatagatatatttcttattaactcgttttgattacttctattgaaaatatattttcaaataaccttgattatgaatg 107  Q
    |||||||||| |||||| ||||| ||||||||||||||| |||| ||  |||||||| ||||||| ||||||| |||| ||| |||||||| ||| || |    
T  33682780 tttttacttaatagttagtactagatagatatatttctttttaattcactttgattaattctattaaaaatatttttttaaagaaccttgactataaagg 33682681  T
Q  108 aattttttgcaacaaaaaatacaagaagaaatacattcaaatgattaaaag 158  Q
    ||| ||||| ||||| |||| | |||||||| |||||| ||  ||||||||    
T  33682680 aatcttttgtaacaacaaatgctagaagaaagacattcgaaaaattaaaag 33682630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 9 - 138
Target Start/End: Complemental strand, 168801 - 168674
Alignment:
Q  9 ttttacttagtagttaatactatatagatatatttcttattaactcgttttgattacttctattgaaaatatattttcaaataaccttgattatgaatga 108  Q
    |||||||||||||| |  |||||||| |||||||  || |||||||| | |||||| |||||||||||||||||||| | | ||||||||||||||||||    
T  168801 ttttacttagtagtcagcactatataaatatattattt-ttaactcgctgtgattaattctattgaaaatatatttt-agagaaccttgattatgaatga 168704  T
Q  109 attttttgcaacaaaaaatacaagaagaaa 138  Q
    || ||||| |||||||||| ||| ||||||    
T  168703 atcttttgtaacaaaaaatgcaacaagaaa 168674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 48 - 158
Target Start/End: Complemental strand, 47000943 - 47000834
Alignment:
Q  48 ttaactcgttttgattacttctattgaaaatatattttcaaataaccttgattatgaatgaattttttgcaacaaaaaatacaagaagaaatacattcaa 147  Q
    |||| ||| |||||||| |||||||||||| ||||||| | ||||  |||||||| ||||||| ||||||||||||||||| ||||||||| | ||| ||    
T  47000943 ttaattcgctttgattaattctattgaaaa-atatttttagataattttgattataaatgaatattttgcaacaaaaaatataagaagaaaaatatttaa 47000845  T
Q  148 atgattaaaag 158  Q
    |||||||||||    
T  47000844 atgattaaaag 47000834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 57 - 138
Target Start/End: Original strand, 11365107 - 11365188
Alignment:
Q  57 tttgattacttctattgaaaatatattttcaaataaccttgattatgaatgaattttttgcaacaaaaaatacaagaagaaa 138  Q
    |||||||| ||| |||||||| ||||||| ||||||| |||||||| ||||||| |||||||||||||||| ||||||||||    
T  11365107 tttgattaattcaattgaaaagatatttttaaataactttgattataaatgaatattttgcaacaaaaaatgcaagaagaaa 11365188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 8 - 131
Target Start/End: Original strand, 39838478 - 39838600
Alignment:
Q  8 tttttacttagtagttaatactatatagatatatttcttattaactcgttttgattacttctattgaaaatatattttcaaataacc-ttgattatgaat 106  Q
    |||||| ||| |||||| |||| |||| ||||||||||| ||||||| || |||||| || ||||||||  ||||||| ||| |||| ||||||||||||    
T  39838478 tttttaattactagttagtactgtataaatatatttctttttaactcattatgattaattatattgaaa--atatttttaaagaacctttgattatgaat 39838575  T
Q  107 gaattttttgcaacaaaaaatacaa 131  Q
    |||| ||||||||||||| ||||||    
T  39838576 gaatcttttgcaacaaaagatacaa 39838600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 1 - 158
Target Start/End: Complemental strand, 8266720 - 8266562
Alignment:
Q  1 attattatttttacttagtagttaatactatatagatatatttcttattaactcgttttgattact-tctattgaaaatatattttcaaataaccttgat 99  Q
    ||||| |||||||| || |||||| || ||||||| |||||||  | |||||||  ||||||||   |||| ||||||||| |||||| | |||||||||    
T  8266720 attatgatttttacgtaatagttagtattatataggtatattttcttttaactctgtttgattaaactctactgaaaatatgttttcagagaaccttgat 8266621  T
Q  100 tatgaatgaattttttgcaacaaaaaatacaagaagaaatacattcaaatgattaaaag 158  Q
    ||| ||||||  |||| ||||||||||||||| |||| | ||||| |||| ||||||||    
T  8266620 tattaatgaaccttttacaacaaaaaatacaaaaagagagacatttaaataattaaaag 8266562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 127
Target Start/End: Original strand, 11383595 - 11383723
Alignment:
Q  1 attattatttttacttagtagttaatactatatagatatatttctta--ttaactcgttttgattacttctattgaaaatatattttcaaataaccttga 98  Q
    ||||||||||||| |||||||||| || |||||| |||||| | |    |||| ||| |||||||| ||| |||||||| ||||||| | ||||| ||||    
T  11383595 attattatttttatttagtagttagtaatatatatatatatatatatctttaattcgctttgattaattcaattgaaaaaatatttttagataactttga 11383694  T
Q  99 ttatgaatgaattttttgcaacaaaaaat 127  Q
    |||| ||||||| ||||||||||||||||    
T  11383695 ttataaatgaatattttgcaacaaaaaat 11383723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 54417147 - 54417032
Alignment:
Q  1 attattatttttacttagtagttaatactatatagatatatttcttattaactcgttttgattacttctattgaaaatatattttcaaataaccttgatt 100  Q
    |||||||||||||||| ||||||| | ||||||||||| ||||| | |||| ||  |||||||| ||||| ||||||||| |||| ||| ||  ||||||    
T  54417147 attattatttttacttggtagttagtgctatatagatacatttccttttaattcactttgattaattctactgaaaatatgtttttaaagaattttgatt 54417048  T
Q  101 atgaatgaattttttg 116  Q
    || ||||||| |||||    
T  54417047 ataaatgaatcttttg 54417032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 48 - 126
Target Start/End: Original strand, 46743998 - 46744076
Alignment:
Q  48 ttaactcgttttgattacttctattgaaaatatattttcaaataaccttgattatgaatgaattttttgcaacaaaaaa 126  Q
    ||||||||||||||||| ||||||| ||||||||||||   | |||||| ||||||||||||| |||||||| ||||||    
T  46743998 ttaactcgttttgattaattctattaaaaatatatttttgtagaaccttaattatgaatgaatcttttgcaaaaaaaaa 46744076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 159 - 207
Target Start/End: Original strand, 228119 - 228167
Alignment:
Q  159 agtatgtcatatcacatactagtggttaggctcttaggagattagaatt 207  Q
    ||||||||  |||||||||||||||||||||||||||||||||||||||    
T  228119 agtatgtcccatcacatactagtggttaggctcttaggagattagaatt 228167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 42417930 - 42417972
Alignment:
Q  1 attattatttttacttagtagttaatactatatagatatattt 43  Q
    |||||||||||||||||||||||||||||||||| ||||||||    
T  42417930 attattatttttacttagtagttaatactatataaatatattt 42417972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 162 - 207
Target Start/End: Original strand, 32530551 - 32530596
Alignment:
Q  162 atgtcatatcacatactagtggttaggctcttaggagattagaatt 207  Q
    |||||||||| ||||| |||||||||||||||||||||||||||||    
T  32530551 atgtcatatctcataccagtggttaggctcttaggagattagaatt 32530596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 5 - 84
Target Start/End: Complemental strand, 19149971 - 19149892
Alignment:
Q  5 ttatttttacttagtagttaatactatatagatatatttcttattaactcgttttgattacttctattgaaaatatattt 84  Q
    ||||||||| ||| ||||||||| | |||| ||||||||||| |||| ||| |||||||| || ||| ||||||||||||    
T  19149971 ttatttttatttaatagttaataatttataaatatatttctttttaattcgctttgattaattatatcgaaaatatattt 19149892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 160 - 207
Target Start/End: Original strand, 53816677 - 53816724
Alignment:
Q  160 gtatgtcatatcacatactagtggttaggctcttaggagattagaatt 207  Q
    |||||||  ||||||||| |||||||||||||||||||||||||||||    
T  53816677 gtatgtcccatcacataccagtggttaggctcttaggagattagaatt 53816724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 160 - 207
Target Start/End: Complemental strand, 26501593 - 26501546
Alignment:
Q  160 gtatgtcatatcacatactagtggttaggctcttaggagattagaatt 207  Q
    |||||||  ||||||||| |||||||| ||||||||||||||||||||    
T  26501593 gtatgtcccatcacataccagtggttatgctcttaggagattagaatt 26501546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 160 - 207
Target Start/End: Complemental strand, 31764591 - 31764544
Alignment:
Q  160 gtatgtcatatcacatactagtggttaggctcttaggagattagaatt 207  Q
    ||||||| |||||||||| |||||||| ||| ||||||||||||||||    
T  31764591 gtatgtcctatcacataccagtggttacgctattaggagattagaatt 31764544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 160 - 207
Target Start/End: Complemental strand, 36402217 - 36402170
Alignment:
Q  160 gtatgtcatatcacatactagtggttaggctcttaggagattagaatt 207  Q
    |||||||  ||||||||| ||||| |||||||||||||||||||||||    
T  36402217 gtatgtcccatcacataccagtggctaggctcttaggagattagaatt 36402170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 160 - 207
Target Start/End: Complemental strand, 47013157 - 47013110
Alignment:
Q  160 gtatgtcatatcacatactagtggttaggctcttaggagattagaatt 207  Q
    |||||||  ||| ||||| |||||||||||||||||||||||||||||    
T  47013157 gtatgtcccatcgcataccagtggttaggctcttaggagattagaatt 47013110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 161 - 207
Target Start/End: Complemental strand, 49165497 - 49165451
Alignment:
Q  161 tatgtcatatcacatactagtggttaggctcttaggagattagaatt 207  Q
    |||||| |||||||||  |||||||| ||||||||||||||||||||    
T  49165497 tatgtcctatcacatagcagtggttaagctcttaggagattagaatt 49165451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 162 - 207
Target Start/End: Original strand, 6937170 - 6937215
Alignment:
Q  162 atgtcatatcacatactagtggttaggctcttaggagattagaatt 207  Q
    ||||| |||||||||  |||||||||||||||||||||||| ||||    
T  6937170 atgtcctatcacatagcagtggttaggctcttaggagattataatt 6937215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 29 - 85
Target Start/End: Original strand, 7741730 - 7741786
Alignment:
Q  29 tatatagatatatttcttattaactcgttttgattacttctattgaaaatatatttt 85  Q
    |||| ||||||||||||| ||||||| ||||||||| || | |||||||||| ||||    
T  7741730 tatagagatatatttctttttaactcattttgattaattttgttgaaaatatgtttt 7741786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 161 - 205
Target Start/End: Original strand, 39353873 - 39353917
Alignment:
Q  161 tatgtcatatcacatactagtggttaggctcttaggagattagaa 205  Q
    |||||| |||||||||  |||||||||| ||||||||||||||||    
T  39353873 tatgtcctatcacatagcagtggttaggatcttaggagattagaa 39353917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 65; Significance: 9e-29; HSPs: 40)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 1 - 138
Target Start/End: Original strand, 1240431 - 1240572
Alignment:
Q  1 attattatttttacttagtagttaatactatatagatatatttcttattaactcgttttgattacttctattgaaaatata----ttttcaaataacctt 96  Q
    |||||||||||||||||||||||| ||||||||| ||||||||||| ||||  || |||||||| ||||||||||||||||    |||| | | ||| |     
T  1240431 attattatttttacttagtagttagtactatataaatatatttctttttaatccgctttgattaattctattgaaaatatatttttttttagagaacttc 1240530  T
Q  97 gattatgaatgaattttttgcaacaaaaaatacaagaagaaa 138  Q
    |||||| ||||||| |||||||||||||||| ||||||||||    
T  1240531 gattataaatgaatcttttgcaacaaaaaatgcaagaagaaa 1240572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 1 - 157
Target Start/End: Complemental strand, 3265590 - 3265435
Alignment:
Q  1 attattatttttacttagtagttaatactatatagatatatttcttattaactcgttttgattacttctattgaaaatatattttcaaataaccttgatt 100  Q
    ||||||||||||||||| |||||| || || ||||||||||||||| |||||||  |||||| | ||||  ||||||||| |||| | | ||| || |||    
T  3265590 attattatttttacttaatagttagtattaaatagatatatttctttttaactccctttgataa-ttcttatgaaaatatgttttaagagaacttttatt 3265492  T
Q  101 atgaatgaattttttgcaacaaaaaatacaagaagaaatacattcaaatgattaaaa 157  Q
    || ||||||| |||||||||||||||| || ||||||| |||||| ||| |||||||    
T  3265491 atcaatgaatcttttgcaacaaaaaatgcacgaagaaagacattcgaataattaaaa 3265435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 1 - 85
Target Start/End: Complemental strand, 8246845 - 8246761
Alignment:
Q  1 attattatttttacttagtagttaatactatatagatatatttcttattaactcgttttgattacttctattgaaaatatatttt 85  Q
    ||||||||||||||||| |||||| ||||||||||||||||||||| |||| | | |||||||| ||||||||||||||||||||    
T  8246845 attattatttttacttaatagttagtactatatagatatatttctttttaatttgatttgattaattctattgaaaatatatttt 8246761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 29 - 138
Target Start/End: Original strand, 35405368 - 35405477
Alignment:
Q  29 tatatagatatatttcttattaactcgttttgattacttctattgaaaatatattttcaaataaccttgattatgaatgaattttttgcaacaaaaaata 128  Q
    |||||| ||||||||||| |||| ||| |||||||| || |||| |||| ||||||| | ||||| |||||||  ||||||| ||||||||||||||||     
T  35405368 tatatatatatatttctttttaattcgctttgattaattatatttaaaaaatatttttagataactttgattagaaatgaatattttgcaacaaaaaatg 35405467  T
Q  129 caagaagaaa 138  Q
    ||||||||||    
T  35405468 caagaagaaa 35405477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 26 - 134
Target Start/End: Complemental strand, 15103147 - 15103039
Alignment:
Q  26 tactatatagatatatttcttattaactcgttttgattacttctattgaaaatatattttcaaataaccttgattatgaatgaattttttgcaacaaaaa 125  Q
    ||||||||||||||||||||| |||  | |||||||||| ||||||||||   ||||||| | | ||| |||||||| ||||||| || |||||||||||    
T  15103147 tactatatagatatatttctttttactttgttttgattaattctattgaagtaatatttttagagaactttgattataaatgaatcttgtgcaacaaaaa 15103048  T
Q  126 atacaagaa 134  Q
    |||||||||    
T  15103047 atacaagaa 15103039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 57 - 133
Target Start/End: Complemental strand, 4626600 - 4626523
Alignment:
Q  57 tttgattacttctattgaaaatatattttcaaataaccttgattatgaatga-attttttgcaacaaaaaatacaaga 133  Q
    |||||||| |||||||||||||||||||| ||| |||||| ||||||||||| || |||||||| |||||||||||||    
T  4626600 tttgattaattctattgaaaatatatttttaaaaaaccttaattatgaatgagatcttttgcaataaaaaatacaaga 4626523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 29664195 - 29664258
Alignment:
Q  1 attattatttttacttagtagttaatactatatagatatatttcttattaactcgttttgatta 64  Q
    |||||||||||||||||||| ||| |||||||||| |||||||||| |||| ||||||||||||    
T  29664195 attattatttttacttagtaattagtactatataggtatatttctttttaattcgttttgatta 29664258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 138
Target Start/End: Complemental strand, 1153849 - 1153713
Alignment:
Q  1 attattatttttacttagtagttaatactatatagatatatttcttattaactcgttttgattacttctattgaaaatatattttcaaataaccttgatt 100  Q
    ||||||||||||| |||||||||| || || |||| ||||||| || ||||||| |||  |||| ||||||| ||||||| |||| | | ||| ||||||    
T  1153849 attattatttttatttagtagttagtattaaatagttatatttgtttttaactccttta-attaattctattaaaaatatgttttaagagaactttgatt 1153751  T
Q  101 atgaatgaattttttgcaacaaaaaatacaagaagaaa 138  Q
     | ||| ||| |||||||||||||||  ||||||||||    
T  1153750 ttcaattaatcttttgcaacaaaaaacgcaagaagaaa 1153713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 126
Target Start/End: Complemental strand, 33735875 - 33735750
Alignment:
Q  1 attattatttttacttagtagttaatactatatagatatatttcttattaactcgttttgattacttctattgaaaatatattttcaaataaccttgatt 100  Q
    ||||||| |||||  ||||||||| || | |||| ||||||||||| |||| | | |||||||| || ||||||||||||||||| | | ||| ||||||    
T  33735875 attattaattttatctagtagttagtattgtataaatatatttctttttaatttggtttgattaattatattgaaaatatatttttagacaactttgatt 33735776  T
Q  101 atgaatgaattttttgcaacaaaaaa 126  Q
    || ||||||| |||||| | ||||||    
T  33735775 ataaatgaatcttttgccaaaaaaaa 33735750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 57 - 138
Target Start/End: Complemental strand, 49762519 - 49762438
Alignment:
Q  57 tttgattacttctattgaaaatatattttcaaataaccttgattatgaatgaattttttgcaacaaaaaatacaagaagaaa 138  Q
    |||||||| |||||||||||||||||||| | | ||| |||||||| ||||| |||| || ||||||||||| |||||||||    
T  49762519 tttgattaattctattgaaaatatatttttagagaactttgattataaatgagttttgtgtaacaaaaaatataagaagaaa 49762438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 60 - 163
Target Start/End: Complemental strand, 22667261 - 22667158
Alignment:
Q  60 gattacttctattgaaaatatattttcaaataaccttgattatgaatgaattttttgcaacaaaaaatacaagaagaaatacattcaaatgattaaaaga 159  Q
    ||||| ||||||||||||| ||||||   ||||| |||||||| ||||||| |||||||| ||||||| |||||||||| | |||  ||| ||||||||     
T  22667261 gattaattctattgaaaatttatttttggataactttgattataaatgaatattttgcaataaaaaatgcaagaagaaaaatatttgaataattaaaagg 22667162  T
Q  160 gtat 163  Q
    ||||    
T  22667161 gtat 22667158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 48 - 158
Target Start/End: Original strand, 38742445 - 38742555
Alignment:
Q  48 ttaactcgttttgattacttctattgaaaatatattttcaaataaccttgattatgaatgaattttttgcaacaaaaaatacaagaagaaatacattcaa 147  Q
    |||||||  ||||||||  ||||||||||||||||||| | | ||| |||||||||||| ||| |||| ||| ||||||| || | | ||| ||||||||    
T  38742445 ttaactcactttgattatatctattgaaaatatatttttagagaactttgattatgaattaatcttttacaaaaaaaaatgcagggaaaaagacattcaa 38742544  T
Q  148 atgattaaaag 158  Q
    || ||||||||    
T  38742545 atcattaaaag 38742555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 5 - 126
Target Start/End: Complemental strand, 34299076 - 34298952
Alignment:
Q  5 ttatttttacttagtagttaatactatatag----atatatttcttattaactcgttttgattacttctattgaaaatatattttcaaataaccttgatt 100  Q
    |||||||| ||||||||||||||| ||||||    |||||||| || |||||| ||| |  ||| |||||||||| ||||||||| ||| || |||||||    
T  34299076 ttatttttccttagtagttaatacgatatagataaatatatttttttttaacttgttgtacttaattctattgaacatatatttttaaagaa-cttgatt 34298978  T
Q  101 atgaatgaattttttgcaacaaaaaa 126  Q
    |||||| ||| |||| || |||||||    
T  34298977 atgaataaatcttttccagcaaaaaa 34298952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 159 - 207
Target Start/End: Original strand, 37952953 - 37953001
Alignment:
Q  159 agtatgtcatatcacatactagtggttaggctcttaggagattagaatt 207  Q
    ||||||||  ||||||||| |||||||||||||||||||||||||||||    
T  37952953 agtatgtcccatcacataccagtggttaggctcttaggagattagaatt 37953001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 160 - 207
Target Start/End: Complemental strand, 3516988 - 3516941
Alignment:
Q  160 gtatgtcatatcacatactagtggttaggctcttaggagattagaatt 207  Q
    |||||||  ||||||||| |||||||||||||||||||||||||||||    
T  3516988 gtatgtcccatcacataccagtggttaggctcttaggagattagaatt 3516941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 91 - 157
Target Start/End: Original strand, 30718175 - 30718241
Alignment:
Q  91 aaccttgattatgaatgaattttttgcaac-aaaaaatacaagaagaaatacattcaaatgattaaaa 157  Q
    |||| |||||||||||||||||||| |||| |||||||| ||||||||| |||||||||| |||||||    
T  30718175 aaccatgattatgaatgaatttttt-caacaaaaaaatataagaagaaagacattcaaataattaaaa 30718241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 160 - 207
Target Start/End: Complemental strand, 42882005 - 42881958
Alignment:
Q  160 gtatgtcatatcacatactagtggttaggctcttaggagattagaatt 207  Q
    |||||||  ||||||||| |||||||||||||||||||||||||||||    
T  42882005 gtatgtcccatcacataccagtggttaggctcttaggagattagaatt 42881958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 160 - 207
Target Start/End: Complemental strand, 48963729 - 48963682
Alignment:
Q  160 gtatgtcatatcacatactagtggttaggctcttaggagattagaatt 207  Q
    |||||||  ||||||||| |||||||||||||||||||||||||||||    
T  48963729 gtatgtcccatcacataccagtggttaggctcttaggagattagaatt 48963682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 169 - 207
Target Start/End: Complemental strand, 12699938 - 12699900
Alignment:
Q  169 atcacatactagtggttaggctcttaggagattagaatt 207  Q
    ||||||||| |||||||||||||||||||||||||||||    
T  12699938 atcacataccagtggttaggctcttaggagattagaatt 12699900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 36 - 126
Target Start/End: Complemental strand, 23897991 - 23897902
Alignment:
Q  36 atatatttcttattaactcgttttgattacttctattgaaaatatattttcaaataaccttgattatgaatgaattttttgcaacaaaaaa 126  Q
    ||||||| ||| |||| | | |||||||| ||||||| |||| ||||||| | ||||| |||||||| ||||||| |||||||||||||||    
T  23897991 atatattcctttttaatttgctttgattaattctatttaaaa-atatttttagataactttgattataaatgaatattttgcaacaaaaaa 23897902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 160 - 202
Target Start/End: Original strand, 27217564 - 27217606
Alignment:
Q  160 gtatgtcatatcacatactagtggttaggctcttaggagatta 202  Q
    ||||||| |||||||||| ||||||||||||||||||||||||    
T  27217564 gtatgtcctatcacatacaagtggttaggctcttaggagatta 27217606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 30717894 - 30717936
Alignment:
Q  1 attattatttttacttagtagttaatactatatagatatattt 43  Q
    |||||||||||||||||||| |||||| |||||||||||||||    
T  30717894 attattatttttacttagtaattaatattatatagatatattt 30717936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 1 - 157
Target Start/End: Complemental strand, 35204340 - 35204188
Alignment:
Q  1 attattatttttacttagtagttaatactatatagatatatttcttattaactcgttttgattacttctattgaaaatatattttcaaataaccttgatt 100  Q
    |||||||||||||||||||| ||| || |||||| | |||||| |||   | | | |||||||| || |||||| || ||||||| | | ||  ||||||    
T  35204340 attattatttttacttagtaattagtattatataaaaatatttttta---aattgctttgattaattatattgacaa-atatttttagagaattttgatt 35204245  T
Q  101 atgaatgaattttttgcaacaaaaaatacaagaagaaatacattcaaatgattaaaa 157  Q
    |||||||||| |||||||| ||||| |||||||| ||| |||||  ||| |||||||    
T  35204244 atgaatgaatattttgcaataaaaagtacaagaaaaaaaacattggaataattaaaa 35204188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 138
Target Start/End: Complemental strand, 45385361 - 45385222
Alignment:
Q  1 attattatttttacttagtagttaatactatatagatatatttcttattaactcgttttgattactt----ctattgaaaatatattttcaaataacctt 96  Q
    ||||||||||||| |||||||||  || || || |||||||||||| |||||||  ||| |||| |     ||||||| ||||| |||  | | ||||||    
T  45385361 attattatttttatttagtagtttgtattaaatggatatatttctttttaactccctttaattaataaatactattgataatatgttt--agagaacctt 45385264  T
Q  97 gattatgaatgaattttttgcaacaaaaaatacaagaagaaa 138  Q
    |||| | ||||||| |||||||||||||||||||||| ||||    
T  45385263 gattttcaatgaatcttttgcaacaaaaaatacaagaggaaa 45385222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 60 - 140
Target Start/End: Complemental strand, 29062432 - 29062352
Alignment:
Q  60 gattacttctattgaaaatatattttcaaataaccttgattatgaatgaattttttgcaacaaaaaatacaagaagaaata 140  Q
    ||||| ||| ||| |||||||||| | | | ||| || ||||| ||| ||| |||||||||||||||||||||||||||||    
T  29062432 gattaattcaatttaaaatatattgttagagaacttttattataaataaatcttttgcaacaaaaaatacaagaagaaata 29062352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 159 - 207
Target Start/End: Original strand, 33802072 - 33802120
Alignment:
Q  159 agtatgtcatatcacatactagtggttaggctcttaggagattagaatt 207  Q
    ||||||||  ||||||||| ||| |||||||||||||||||||||||||    
T  33802072 agtatgtctcatcacataccagtagttaggctcttaggagattagaatt 33802120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 160 - 207
Target Start/End: Original strand, 22859413 - 22859460
Alignment:
Q  160 gtatgtcatatcacatactagtggttaggctcttaggagattagaatt 207  Q
    |||||||  ||| ||||| |||||||||||||||||||||||||||||    
T  22859413 gtatgtcccatcccataccagtggttaggctcttaggagattagaatt 22859460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 160 - 207
Target Start/End: Complemental strand, 23983416 - 23983369
Alignment:
Q  160 gtatgtcatatcacatactagtggttaggctcttaggagattagaatt 207  Q
    ||||||| ||||||| || |||||||||| ||||||||||||||||||    
T  23983416 gtatgtcctatcacacaccagtggttaggatcttaggagattagaatt 23983369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 160 - 207
Target Start/End: Original strand, 41724221 - 41724268
Alignment:
Q  160 gtatgtcatatcacatactagtggttaggctcttaggagattagaatt 207  Q
    |||||||  ||||||||| |||||||||||| ||||||||||||||||    
T  41724221 gtatgtcccatcacataccagtggttaggctattaggagattagaatt 41724268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 95 - 157
Target Start/End: Original strand, 36382976 - 36383038
Alignment:
Q  95 ttgattatgaatgaattttttgcaacaaaaaatacaagaagaaatacattcaaatgattaaaa 157  Q
    |||||||||||||||| |||  |||||||||||  | ||||||| |||||||||| |||||||    
T  36382976 ttgattatgaatgaatatttcacaacaaaaaatgtatgaagaaaaacattcaaataattaaaa 36383038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 161 - 207
Target Start/End: Original strand, 38861435 - 38861481
Alignment:
Q  161 tatgtcatatcacatactagtggttaggctcttaggagattagaatt 207  Q
    |||||| |||||||||  ||||||||| |||||||||||||||||||    
T  38861435 tatgtcctatcacatagcagtggttagactcttaggagattagaatt 38861481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 161 - 207
Target Start/End: Original strand, 41087160 - 41087206
Alignment:
Q  161 tatgtcatatcacatactagtggttaggctcttaggagattagaatt 207  Q
    |||||| |||||||||  |||||||||| ||||||||||||||||||    
T  41087160 tatgtcctatcacatagcagtggttaggatcttaggagattagaatt 41087206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 161 - 207
Target Start/End: Original strand, 41091928 - 41091974
Alignment:
Q  161 tatgtcatatcacatactagtggttaggctcttaggagattagaatt 207  Q
    |||||| |||||||||  |||||||||| ||||||||||||||||||    
T  41091928 tatgtcctatcacatagcagtggttaggatcttaggagattagaatt 41091974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 161 - 207
Target Start/End: Complemental strand, 41899680 - 41899634
Alignment:
Q  161 tatgtcatatcacatactagtggttaggctcttaggagattagaatt 207  Q
    |||||| |||||||||  |||||||||| ||||||||||||||||||    
T  41899680 tatgtcctatcacatagcagtggttaggatcttaggagattagaatt 41899634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 169 - 207
Target Start/End: Original strand, 44497235 - 44497273
Alignment:
Q  169 atcacatactagtggttaggctcttaggagattagaatt 207  Q
    |||||| |||||||||||||||||||||||||| |||||    
T  44497235 atcacaaactagtggttaggctcttaggagatttgaatt 44497273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 169 - 207
Target Start/End: Complemental strand, 44754793 - 44754755
Alignment:
Q  169 atcacatactagtggttaggctcttaggagattagaatt 207  Q
    ||||||||| |||||||||||||||||||||| ||||||    
T  44754793 atcacataccagtggttaggctcttaggagataagaatt 44754755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 40892 - 40859
Alignment:
Q  1 attattatttttacttagtagttaatactatata 34  Q
    |||||||||||||||| |||||||||||||||||    
T  40892 attattatttttactttgtagttaatactatata 40859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 56 - 157
Target Start/End: Complemental strand, 29868862 - 29868761
Alignment:
Q  56 ttttgattacttctattgaaaatatattttcaaataaccttgattatgaatgaattttttgcaacaaaaaatacaagaagaaatacattcaaatgattaa 155  Q
    ||||||||| ||||||| ||||||| || | |||||||| |  ||  ||||| |||||||||||||||| ||| || || |||||||||  ||| |||||    
T  29868862 ttttgattaattctattaaaaatattttgttaaataaccctattttcgaatggattttttgcaacaaaagatataaaaataaatacatttgaataattaa 29868763  T
Q  156 aa 157  Q
    ||    
T  29868762 aa 29868761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 2 - 126
Target Start/End: Complemental strand, 16141640 - 16141517
Alignment:
Q  2 ttattatttttacttagtagttaatactatatagatatatttcttattaactcgttttgattacttctattgaaaatatattttcaaataaccttgatta 101  Q
    |||||||| ||| |||||||||| || |||||| | |||||| || ||||||   |||||| | ||||| |||||||||||||| | ||||  || ||||    
T  16141640 ttattattgttatttagtagttagtattatatataaatatttgtttttaactttctttgatcaattctaatgaaaatatatttt-agataattttaatta 16141542  T
Q  102 tgaatgaattttttgcaacaaaaaa 126  Q
    |||| | || |||||||| ||||||    
T  16141541 tgaacggatattttgcaataaaaaa 16141517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 161 - 205
Target Start/End: Complemental strand, 50261368 - 50261324
Alignment:
Q  161 tatgtcatatcacatactagtggttaggctcttaggagattagaa 205  Q
    |||||| ||||||||| ||||||||||  ||||||||||||||||    
T  50261368 tatgtcctatcacatagtagtggttagaatcttaggagattagaa 50261324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 63; Significance: 1e-27; HSPs: 32)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 1 - 115
Target Start/End: Complemental strand, 40877050 - 40876936
Alignment:
Q  1 attattatttttacttagtagttaatactatatagatatatttcttattaactcgttttgattacttctattgaaaatatattttcaaataaccttgatt 100  Q
    |||||||||||||||| ||||||| || |||||| ||||||||||| |||||| |||| ||||| |||||||||||||||||||| | | ||||||||||    
T  40877050 attattatttttacttggtagttagtattatataaatatatttctttttaacttgtttggattaattctattgaaaatatatttttatagaaccttgatt 40876951  T
Q  101 atgaatgaatttttt 115  Q
    |||| ||||| ||||    
T  40876950 atgagtgaatctttt 40876936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 1 - 138
Target Start/End: Original strand, 5163796 - 5163933
Alignment:
Q  1 attattatttttacttagtagttaatactatatagatatatttcttattaactcgttttgattacttctattgaaaatatattttcaaataaccttgatt 100  Q
    |||||||||||||||||||||||| ||||||||| |||||| |||| |||| ||| |||||||| || |||||| |||||  ||| | | ||| ||||||    
T  5163796 attattatttttacttagtagttagtactatataaatatatatctttttaattcggtttgattaattatattgagaatattattttagaaaactttgatt 5163895  T
Q  101 atgaatgaattttttgcaacaaaaaatacaagaagaaa 138  Q
    || ||||||| ||||| ||||||||||  |||||||||    
T  5163896 ataaatgaatcttttgtaacaaaaaatgtaagaagaaa 5163933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 1 - 133
Target Start/End: Complemental strand, 30257906 - 30257773
Alignment:
Q  1 attattatttttacttagtagttaatacta-tatagatatatttcttattaactcgttttgattacttctattgaaaatatattttcaaataaccttgat 99  Q
    |||||| |||||||||| |||||||||||| |||||||||||||||| | || ||| |||||||| || ||||||||||||||||| | | ||| |||||    
T  30257906 attattttttttacttaatagttaatactaatatagatatatttcttttcaattcggtttgattaattatattgaaaatatatttttagagaactttgat 30257807  T
Q  100 tatgaatgaattttttgcaacaaaaaatacaaga 133  Q
    ||| ||| ||| ||||| |||||||||| |||||    
T  30257806 tataaataaatcttttgaaacaaaaaatgcaaga 30257773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 1 - 138
Target Start/End: Original strand, 38561846 - 38561982
Alignment:
Q  1 attattatttttacttagtagttaatactatatagatatatttcttattaactcgttttgattacttctattgaaaatatattttcaaataaccttgatt 100  Q
    ||||||||||||| |||||||||| ||| ||||||||| ||||||| |||| | |||||||||| ||| ||||||||||| |||| | | ||| || |||    
T  38561846 attattatttttatttagtagttattacaatatagatacatttctttttaatttgttttgattaattc-attgaaaatatttttttagagaactttcatt 38561944  T
Q  101 atgaatgaattttttgcaacaaaaaatacaagaagaaa 138  Q
    || ||||||| || ||||||||||||||||| ||||||    
T  38561945 ataaatgaatattgtgcaacaaaaaatacaaaaagaaa 38561982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 1 - 126
Target Start/End: Complemental strand, 18830099 - 18829973
Alignment:
Q  1 attattatttttacttagtagttaatactatatagatatatttcttatt-aactcgttttgattacttctattgaaaatatattttcaaataaccttgat 99  Q
    ||||||||||||||||||| | || ||||||||||||||||||||| || |||  | | |||||| || ||||||||||||||||| | | |||  ||||    
T  18830099 attattatttttacttagtgggtagtactatatagatatatttcttttttaacatgctatgattaattttattgaaaatatatttttagagaacaatgat 18830000  T
Q  100 tatgaatgaattttttgcaacaaaaaa 126  Q
    |||||||||||||||||||| ||||||    
T  18829999 tatgaatgaattttttgcaaaaaaaaa 18829973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 32 - 163
Target Start/End: Complemental strand, 16647053 - 16646922
Alignment:
Q  32 atagatatatttcttattaactcgttttgattacttctattgaaaatatattttcaaataaccttgattatgaatgaattttttgcaacaaaaaatacaa 131  Q
    ||||||||||||||| |||| | |||||||||| ||||||||||||||| |||| | | ||  || ||||| ||||||| || |||||||||||||| ||    
T  16647053 atagatatatttctttttaatttgttttgattaattctattgaaaatatctttttagagaattttaattataaatgaatcttgtgcaacaaaaaataaaa 16646954  T
Q  132 gaagaaatacattcaaatgattaaaagagtat 163  Q
    ||||||| | ||| |||| |||||||| ||||    
T  16646953 gaagaaaaatattaaaataattaaaagggtat 16646922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 28556730 - 28556632
Alignment:
Q  1 attattatttttacttagtagttaatactatatagatatatttcttattaactcgttttgattacttctattgaaaatatattttcaaataaccttgat 99  Q
    |||||||||||||||||||||||| ||||||||||||| ||||| | | || ||| |||||||| || |||| |||||||||||| ||| ||| |||||    
T  28556730 attattatttttacttagtagttagtactatatagatacatttcgtttaaattcggtttgattaattatattaaaaatatatttttaaagaactttgat 28556632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 57 - 158
Target Start/End: Original strand, 44157275 - 44157375
Alignment:
Q  57 tttgattacttctattgaaaatatattttcaaataaccttgattatgaatgaattttttgcaacaaaaaatacaagaagaaatacattcaaatgattaaa 156  Q
    |||||||| |||||||  ||||||||||| | | || |||||||||||||||| |||| ||| |||||| |||||||||||||| |||||||| ||||||    
T  44157275 tttgattaattctattagaaatatatttttagagaaacttgattatgaatgaaatttt-gcagcaaaaattacaagaagaaatatattcaaataattaaa 44157373  T
Q  157 ag 158  Q
    ||    
T  44157374 ag 44157375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 36 - 130
Target Start/End: Original strand, 32415357 - 32415449
Alignment:
Q  36 atatatttcttattaactcgttttgattacttctattgaaaatatattttcaaataaccttgattatgaatgaattttttgcaacaaaaaataca 130  Q
    ||||||||||| ||||||| ||||||||| || |||||||  |||||||| | | ||||| ||||||||||| || |||||||||||||||||||    
T  32415357 atatatttctttttaactcattttgattaattttattgaa--tatatttttagagaacctcgattatgaatgcatcttttgcaacaaaaaataca 32415449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 69 - 160
Target Start/End: Complemental strand, 38608403 - 38608312
Alignment:
Q  69 tattgaaaatatattttcaaataaccttgattatgaatgaattttttgcaacaaaaaatacaagaagaaatacattcaaatgattaaaagag 160  Q
    ||||||||||||||||| ||| |||||| ||||||||| |||  |||||||||||||||||| ||| ||| |||||  ||| ||||||||||    
T  38608403 tattgaaaatatatttttaaagaaccttaattatgaatcaatcatttgcaacaaaaaatacaggaataaacacatttgaataattaaaagag 38608312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 36 - 158
Target Start/End: Complemental strand, 36186700 - 36186578
Alignment:
Q  36 atatatttcttattaactcgttttgattacttctattgaaaatatattttcaaataaccttgattatgaatgaattttttgcaacaaaaaatacaagaag 135  Q
    ||||||||||| |||| ||  |||||||| || ||||||||||||||||| | | ||| |||||||| ||| ||| ||||||||||||||||  | ||||    
T  36186700 atatatttctttttaattctctttgattaattatattgaaaatatatttttagagaactttgattataaataaatcttttgcaacaaaaaatgtatgaag 36186601  T
Q  136 aaatacattcaaatgattaaaag 158  Q
    ||| |||||  ||| ||||||||    
T  36186600 aaaaacattagaataattaaaag 36186578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 29 - 138
Target Start/End: Original strand, 34345961 - 34346068
Alignment:
Q  29 tatatagatatatttcttattaactcgttttgattacttctattgaaaatatattttcaaataaccttgattatgaatgaattttttgcaacaaaaaata 128  Q
    |||||||||||||||||| |||| | | |||||||| || ||||||||||||||||| | | ||  |||||| | |||||| |||| |||||||||||||    
T  34345961 tatatagatatatttctt-ttaatttggtttgattagttatattgaaaatatatttttatagaattttgattctaaatgaactttt-gcaacaaaaaata 34346058  T
Q  129 caagaagaaa 138  Q
    ||||||||||    
T  34346059 caagaagaaa 34346068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 4 - 138
Target Start/End: Complemental strand, 35281055 - 35280919
Alignment:
Q  4 attatttttacttagtagttaatactatatagata--tatt-tcttattaactcgttttgattacttctattgaaaatatattttcaaataaccttgatt 100  Q
    |||||||||||||| |||||| || | ||||||||  |||| | || |||||| | |||||||| |||||||||||||||||||| ||||||   | |||    
T  35281055 attatttttacttaatagttagtattgtatagatacatattatttttttaacttgatttgattaattctattgaaaatatatttttaaataattatcatt 35280956  T
Q  101 atgaatgaattttttgcaacaaaaaatacaagaagaaa 138  Q
    |||||||||| |||| | | ||||||| ||||||||||    
T  35280955 atgaatgaatctttttc-ataaaaaatgcaagaagaaa 35280919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 8 - 144
Target Start/End: Original strand, 38134084 - 38134217
Alignment:
Q  8 tttttacttagtagttaatactatatagatatatttcttattaactcgttttgattacttctattgaaaatatattttcaaataaccttgattatgaatg 107  Q
    ||||||||||||||||| || || ||| ||||  ||||| |||||||| |||||||| || |||| ||||||| |||| | | ||||||  ||| |||||    
T  38134084 tttttacttagtagttagtagtacataaatat--ttctttttaactcgatttgattaattatattaaaaatatttttt-agagaaccttatttacgaatg 38134180  T
Q  108 aattttttgcaacaaaaaatacaagaagaaatacatt 144  Q
    ||| ||||||||||||||||  ||||| ||| |||||    
T  38134181 aatcttttgcaacaaaaaatgtaagaaaaaagacatt 38134217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 29 - 126
Target Start/End: Original strand, 45443645 - 45443747
Alignment:
Q  29 tatatagatatatttcttattaactcgttttgattacttctattgaaaatatattttc--aaataacct---tgattatgaatgaattttttgcaacaaa 123  Q
    |||||| |||||||| || |||||| ||||| |||| ||| ||||||||||||| |||  | | |||||   ||||||||||||||||||||||||||||    
T  45443645 tatatacatatatttttttttaacttgttttaattaattccattgaaaatatatattcttagagaaccttgatgattatgaatgaattttttgcaacaaa 45443744  T
Q  124 aaa 126  Q
    |||    
T  45443745 aaa 45443747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 160 - 207
Target Start/End: Original strand, 15912453 - 15912500
Alignment:
Q  160 gtatgtcatatcacatactagtggttaggctcttaggagattagaatt 207  Q
    |||||||  ||||||||| |||||||||||||||||||||||||||||    
T  15912453 gtatgtcccatcacataccagtggttaggctcttaggagattagaatt 15912500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 4 - 79
Target Start/End: Complemental strand, 36506994 - 36506919
Alignment:
Q  4 attatttttacttagtagttaatactatatagatatatttcttattaactcgttttgattacttctattgaaaata 79  Q
    |||||||||| |||||||||| || |||||||| |||||| || |||||||  |||||||  ||||||||||||||    
T  36506994 attatttttaattagtagttagtattatatagaaatatttgtttttaactctctttgattgattctattgaaaata 36506919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 91 - 158
Target Start/End: Complemental strand, 40705956 - 40705889
Alignment:
Q  91 aaccttgattatgaatgaattttttgcaacaaaaaatacaagaagaaatacattcaaatgattaaaag 158  Q
    |||||||||||  ||| ||||||||| || ||||||| |||||||||| |||||||||| ||||||||    
T  40705956 aaccttgattacaaataaattttttgtaataaaaaatgcaagaagaaagacattcaaataattaaaag 40705889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 160 - 207
Target Start/End: Original strand, 45234968 - 45235015
Alignment:
Q  160 gtatgtcatatcacatactagtggttaggctcttaggagattagaatt 207  Q
    |||||||  ||||||||| |||||||||||||||||||||||||||||    
T  45234968 gtatgtcccatcacataccagtggttaggctcttaggagattagaatt 45235015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 161 - 207
Target Start/End: Complemental strand, 7940937 - 7940891
Alignment:
Q  161 tatgtcatatcacatactagtggttaggctcttaggagattagaatt 207  Q
    |||||| |||||||||  |||||||||||||||||||||||||||||    
T  7940937 tatgtcctatcacatagcagtggttaggctcttaggagattagaatt 7940891  T

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Target: chr2; HSP #21
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 169 - 207
Target Start/End: Complemental strand, 17137088 - 17137050
Alignment:
Q  169 atcacatactagtggttaggctcttaggagattagaatt 207  Q
    ||||||||| |||||||||||||||||||||||||||||    
T  17137088 atcacataccagtggttaggctcttaggagattagaatt 17137050  T

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Target: chr2; HSP #22
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 50 - 128
Target Start/End: Complemental strand, 26350516 - 26350439
Alignment:
Q  50 aactcgttttgattacttctattgaaaatatattttcaaataaccttgattatgaatgaattttttgcaacaaaaaata 128  Q
    |||||| |||||||| || |||||||||||| |||| ||| ||| ||  |||||||||||||||||||| |||||||||    
T  26350516 aactcgctttgattaattttattgaaaatattttttaaaa-aactttatttatgaatgaattttttgcagcaaaaaata 26350439  T

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Target: chr2; HSP #23
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 161 - 207
Target Start/End: Complemental strand, 31993472 - 31993426
Alignment:
Q  161 tatgtcatatcacatactagtggttaggctcttaggagattagaatt 207  Q
    |||||||||||||||| |||||||||| || ||||||||||||||||    
T  31993472 tatgtcatatcacatagtagtggttagacttttaggagattagaatt 31993426  T

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Target: chr2; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 57 - 134
Target Start/End: Complemental strand, 4206408 - 4206331
Alignment:
Q  57 tttgattacttctattgaaaatatattttcaaataaccttgattatgaatgaattttttgcaacaaaaaatacaagaa 134  Q
    |||||||| ||||||| |||| ||| ||| | ||||| || ||||| ||||||| |||||||||||||||| ||||||    
T  4206408 tttgattaattctatttaaaaaatacttttagataactttaattataaatgaatattttgcaacaaaaaatgcaagaa 4206331  T

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Target: chr2; HSP #25
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 28148893 - 28148993
Alignment:
Q  1 attattatttttacttagtagttaatactatatagatatatttcttattaactcgttttgattacttctattgaaaatatattttcaaataaccttgatt 100  Q
    ||||||| |||||  ||||| ||| ||||||| |||||||| | || |||| |||||||||||| || ||||||||||| ||||| ||| ||| ||||||    
T  28148893 attattacttttatatagtaattagtactatagagatatatatttt-ttaattcgttttgattaattatattgaaaataaatttttaaagaactttgatt 28148991  T
Q  101 at 102  Q
    ||    
T  28148992 at 28148993  T

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Target: chr2; HSP #26
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 82 - 159
Target Start/End: Complemental strand, 32596823 - 32596746
Alignment:
Q  82 ttttcaaataaccttgattatgaatgaattttttgcaacaaaaaatacaagaagaaatacattcaaatgattaaaaga 159  Q
    |||| ||||||| || ||||| ||||||| |||| ||| ||||||||||| |||||| ||||| |||| |||||||||    
T  32596823 tttttaaataacatttattattaatgaatcttttacaataaaaaatacaaaaagaaagacattaaaataattaaaaga 32596746  T

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Target: chr2; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 85
Target Start/End: Original strand, 18197342 - 18197425
Alignment:
Q  1 attattatttttacttagtagttaatactatatagatatatttcttattaactcgttttgattacttctattgaaaatatatttt 85  Q
    ||||||||||||||||  |||||| || ||| || ||||||||||| ||||||||||||| |||  |||| ||||||||| ||||    
T  18197342 attattatttttacttgatagttagtattat-tacatatatttctttttaactcgttttggttaagtctactgaaaatatttttt 18197425  T

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Target: chr2; HSP #28
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 160 - 207
Target Start/End: Original strand, 6404857 - 6404904
Alignment:
Q  160 gtatgtcatatcacatactagtggttaggctcttaggagattagaatt 207  Q
    |||||||  |||| |||| |||||||||||||||||||||||||||||    
T  6404857 gtatgtcccatcatataccagtggttaggctcttaggagattagaatt 6404904  T

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Target: chr2; HSP #29
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 36 - 123
Target Start/End: Original strand, 37912332 - 37912419
Alignment:
Q  36 atatatttcttattaactcgttttgattacttctattgaaaatatattttcaaataaccttgattatgaatgaattttttgcaacaaa 123  Q
    |||||| |||| |||| ||| |||||||  |||| |||||||||||||||    |||| |||||||| ||||||| ||||||||||||    
T  37912332 atatatatctttttaattcgctttgatttattctcttgaaaatatatttttgggtaactttgattataaatgaatattttgcaacaaa 37912419  T

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Target: chr2; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 48 - 138
Target Start/End: Complemental strand, 2887103 - 2887013
Alignment:
Q  48 ttaactcgttttgattacttctattgaaaatatattttcaaataaccttgattatgaatgaattttttgcaacaaaaaatacaagaagaaa 138  Q
    |||| |||||||||||| ||||||| |||| ||||||| | | ||| |||||||| ||| |||  | | ||||||||||| ||||||||||    
T  2887103 ttaattcgttttgattaattctattaaaaaaatatttttagagaactttgattataaataaatcatctacaacaaaaaatgcaagaagaaa 2887013  T

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Target: chr2; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 28226871 - 28226833
Alignment:
Q  1 attattatttttacttagtagttaatactatatagatat 39  Q
    ||||||||||||| ||||||||||||| |||||||||||    
T  28226871 attattatttttatttagtagttaatattatatagatat 28226833  T

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Target: chr2; HSP #32
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 160 - 205
Target Start/End: Complemental strand, 38702980 - 38702935
Alignment:
Q  160 gtatgtcatatcacatactagtggttaggctcttaggagattagaa 205  Q
    |||||||  ||||||||| ||||||||||||| |||||||||||||    
T  38702980 gtatgtcccatcacataccagtggttaggctcataggagattagaa 38702935  T

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Target: scaffold0531 (Bit Score: 58; Significance: 1e-24; HSPs: 1)
Name: scaffold0531
Description:

Target: scaffold0531; HSP #1
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 1 - 138
Target Start/End: Original strand, 9705 - 9841
Alignment:
Q  1 attattatttttacttagtagttaatactatatagatatatttcttattaactcgttttgattacttctattgaaaatatattttcaaataaccttgatt 100  Q
    ||||||||||||| |||||||||| |||||||||||||||| |||| |||| ||| |||||||| || |||||| |||||||||| | | ||| ||||||    
T  9705 attattatttttatttagtagttagtactatatagatatatatctttttaattcggtttgattaattatattgagaatatatttttagaaaactttgatt 9804  T
Q  101 atgaatgaattttttgcaacaaaaaatacaagaagaaa 138  Q
    || ||||||  |||| |||||||||||| || ||||||    
T  9805 ataaatgaa-gttttacaacaaaaaatataaaaagaaa 9841  T

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Target: scaffold0121 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0121
Description:

Target: scaffold0121; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 160 - 207
Target Start/End: Complemental strand, 46825 - 46778
Alignment:
Q  160 gtatgtcatatcacatactagtggttaggctcttaggagattagaatt 207  Q
    ||||||| |||||||||| ||||||||||||||| |||||||||||||    
T  46825 gtatgtcctatcacataccagtggttaggctcttgggagattagaatt 46778  T

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Target: scaffold0527 (Bit Score: 33; Significance: 0.000000001; HSPs: 2)
Name: scaffold0527
Description:

Target: scaffold0527; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 69 - 157
Target Start/End: Original strand, 1717 - 1805
Alignment:
Q  69 tattgaaaatatattttcaaataaccttgattatgaatgaattttttgcaacaaaaaatacaagaagaaatacattcaaatgattaaaa 157  Q
    ||||||||||||||||| | | ||| |||||||| ||| ||| |||||||| |||||||  ||||||||| | ||| |||| |||||||    
T  1717 tattgaaaatatatttttagagaactttgattataaataaatcttttgcaataaaaaatgaaagaagaaaaatattgaaataattaaaa 1805  T

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Target: scaffold0527; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 69 - 157
Target Start/End: Original strand, 9780 - 9868
Alignment:
Q  69 tattgaaaatatattttcaaataaccttgattatgaatgaattttttgcaacaaaaaatacaagaagaaatacattcaaatgattaaaa 157  Q
    ||||||||||||||||| | | ||| |||||||| ||| ||| |||||||| |||||||  ||||||||| | ||| |||| |||||||    
T  9780 tattgaaaatatatttttagagaactttgattataaataaatcttttgcaataaaaaatgaaagaagaaaaatattgaaataattaaaa 9868  T

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