View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF3296_low_51 (Length: 290)
Name: NF3296_low_51
Description: NF3296
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3296_low_51 |
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Alignment Details
Target: chr8 (Bit Score: 250; Significance: 1e-139; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 250; E-Value: 1e-139
Query Start/End: Original strand, 12 - 265
Target Start/End: Original strand, 37503713 - 37503966
Alignment:
| Q |
12 |
atgaaatgtatattattgaagtagaagatgattccatggaaaatttcctcttcacaggttgtatttcttcttccatttattttgctaacaaattaagcaa |
111 |
Q |
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| T |
37503713 |
atgaaatgtatattattgaagtagaagatgattccatggaaaatttcctcttcacaggttgtatttcctcttccatttattttgctaacaaattaagcaa |
37503812 |
T |
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| Q |
112 |
tattatttttatttggtctttcactagatgatacaccagaatcaccatcatcattatctactctaataataatatcaaactctcctacattatgtgaccc |
211 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
37503813 |
tattatttttatttggtctttcactagatgatacaccagaatcaccatcatcattatctactctaataataatatcaaactctcctacattatgtgaccc |
37503912 |
T |
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| Q |
212 |
taatcctctcccaacagcattatcagagctttctgtatgtccttgattctgagt |
265 |
Q |
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| T |
37503913 |
taatcctctcccaacagcattatcagagctttctgtatgtccttgattctgagt |
37503966 |
T |
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