View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF3298_low_1 (Length: 651)

Name: NF3298_low_1
Description: NF3298
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF3298_low_1
NF3298_low_1
[»] chr1 (19 HSPs)
chr1 (13-635)||(3615247-3615864)
chr1 (1-375)||(52076767-52077141)
chr1 (396-635)||(52076531-52076770)
chr1 (534-635)||(3617512-3617613)
chr1 (348-527)||(48494129-48494304)
chr1 (523-635)||(6049428-6049540)
chr1 (525-635)||(9226221-9226331)
chr1 (423-635)||(6047919-6048129)
chr1 (534-635)||(27556270-27556371)
chr1 (551-635)||(52078126-52078210)
chr1 (420-526)||(26803120-26803226)
chr1 (420-529)||(40110556-40110665)
chr1 (456-529)||(24516437-24516510)
chr1 (559-635)||(17190553-17190629)
chr1 (521-593)||(26287786-26287858)
chr1 (281-320)||(48494061-48494100)
chr1 (565-618)||(27557737-27557790)
chr1 (537-593)||(5613103-5613159)
chr1 (537-593)||(26286454-26286510)
[»] chr7 (17 HSPs)
chr7 (1-408)||(16756997-16757402)
chr7 (534-635)||(16755871-16755972)
chr7 (469-618)||(29589220-29589369)
chr7 (352-527)||(44553307-44553478)
chr7 (537-634)||(3332175-3332272)
chr7 (559-635)||(48312693-48312769)
chr7 (525-635)||(3330692-3330802)
chr7 (534-635)||(9081393-9081494)
chr7 (534-635)||(44372729-44372830)
chr7 (534-635)||(44381585-44381686)
chr7 (541-635)||(44376710-44376804)
chr7 (541-635)||(44385577-44385671)
chr7 (582-635)||(16757422-16757475)
chr7 (281-320)||(44553511-44553550)
chr7 (429-591)||(43442673-43442835)
chr7 (423-486)||(17288149-17288212)
chr7 (560-631)||(48312028-48312099)
[»] chr4 (23 HSPs)
chr4 (423-635)||(49895040-49895253)
chr4 (523-635)||(56085347-56085459)
chr4 (550-635)||(4872262-4872347)
chr4 (534-635)||(23104022-23104123)
chr4 (534-635)||(44498460-44498561)
chr4 (534-635)||(45535046-45535147)
chr4 (423-635)||(44499889-44500100)
chr4 (423-486)||(47667324-47667387)
chr4 (429-486)||(3528336-3528393)
chr4 (534-635)||(4871494-4871595)
chr4 (535-635)||(19750309-19750409)
chr4 (535-635)||(19789397-19789497)
chr4 (444-486)||(56001197-56001239)
chr4 (423-548)||(26631123-26631248)
chr4 (423-492)||(29665481-29665550)
chr4 (537-593)||(26629833-26629889)
chr4 (599-635)||(31712670-31712706)
chr4 (423-486)||(46795933-46795996)
chr4 (446-492)||(26376450-26376496)
chr4 (565-618)||(23102599-23102652)
chr4 (420-529)||(41348342-41348451)
chr4 (565-618)||(45536519-45536572)
chr4 (599-635)||(31711006-31711042)
[»] chr8 (18 HSPs)
chr8 (423-634)||(24191378-24191588)
chr8 (534-635)||(39174742-39174843)
chr8 (534-635)||(10669460-10669561)
chr8 (525-635)||(10667969-10668079)
chr8 (538-635)||(32553926-32554023)
chr8 (538-635)||(39173116-39173213)
chr8 (550-634)||(7844712-7844796)
chr8 (538-634)||(35800998-35801094)
chr8 (537-634)||(24192681-24192778)
chr8 (423-548)||(31844455-31844580)
chr8 (538-635)||(32552296-32552393)
chr8 (534-635)||(35799452-35799552)
chr8 (420-529)||(22621038-22621147)
chr8 (444-486)||(39516425-39516467)
chr8 (537-593)||(31845812-31845868)
chr8 (445-527)||(2075480-2075562)
chr8 (424-478)||(24068472-24068526)
chr8 (550-635)||(35070688-35070773)
[»] chr2 (4 HSPs)
chr2 (534-635)||(23233711-23233812)
chr2 (550-635)||(23231540-23231625)
chr2 (348-408)||(42368135-42368195)
chr2 (431-511)||(2717693-2717773)
[»] chr6 (5 HSPs)
chr6 (423-623)||(18242214-18242414)
chr6 (537-616)||(18240418-18240498)
chr6 (456-531)||(18773755-18773830)
chr6 (445-527)||(29675582-29675664)
chr6 (458-486)||(11968406-11968434)
[»] chr3 (19 HSPs)
chr3 (423-635)||(10301722-10301934)
chr3 (526-634)||(48083228-48083336)
chr3 (551-635)||(7270323-7270407)
chr3 (560-634)||(54108540-54108614)
chr3 (534-631)||(54110298-54110395)
chr3 (559-635)||(48084993-48085069)
chr3 (565-635)||(44601649-44601719)
chr3 (534-635)||(53194626-53194727)
chr3 (423-486)||(47766858-47766921)
chr3 (534-635)||(10300939-10301041)
chr3 (534-635)||(44603057-44603158)
chr3 (423-492)||(48253073-48253142)
chr3 (534-593)||(10338780-10338839)
chr3 (560-634)||(46368809-46368883)
chr3 (445-527)||(143104-143186)
chr3 (423-485)||(53809400-53809462)
chr3 (349-390)||(17029909-17029950)
chr3 (456-517)||(45422105-45422166)
chr3 (423-511)||(21515384-21515472)
[»] chr5 (3 HSPs)
chr5 (423-593)||(10736842-10737012)
chr5 (534-635)||(9220475-9220576)
chr5 (424-529)||(8188108-8188213)
[»] scaffold0084 (1 HSPs)
scaffold0084 (456-531)||(11807-11882)


Alignment Details
Target: chr1 (Bit Score: 373; Significance: 0; HSPs: 19)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 373; E-Value: 0
Query Start/End: Original strand, 13 - 635
Target Start/End: Complemental strand, 3615864 - 3615247
Alignment:
Q  13 attgttcttgtgtatcacgaggtataacaacaataatttgaatagcaacaataatacatgttagttgagatgcaaatctcttccctattgttgttaatgt 112  Q
    |||||||||||||||||||| |||||||| ||| |||||||||||||||||||||||||||     ||||||||||||||||||||||||||||||||||    
T  3615864 attgttcttgtgtatcacgatgtataacagcaacaatttgaatagcaacaataatacatgtg----gagatgcaaatctcttccctattgttgttaatgt 3615769  T
Q  113 t---------ttgatgggttgaatctgaattgtaggttgttgttgttggtagggatgacgaacaatggattctgatggagaataattaatggtattgttc 203  Q
    |         ||||||||||||||||||||| ||||||||||||||||||||||||||  |||||||| |||||||||||||||||||||||| ||||||    
T  3615768 tgttaatgttttgatgggttgaatctgaattttaggttgttgttgttggtagggatgagaaacaatgggttctgatggagaataattaatggtgttgttc 3615669  T
Q  204 ataaaatggttttgaatttatgttagatatgcaattttgaatggatcaacaattgttctagtgatgtttatagatgaaaatttgagatttaagtgaagta 303  Q
    ||||||||||||||||||| ||||||||||||||||| |||||||||  || ||||||||||||||||||||||||||||||||||||||||| ||||||    
T  3615668 ataaaatggttttgaatttttgttagatatgcaatttcgaatggatctgcagttgttctagtgatgtttatagatgaaaatttgagatttaagcgaagta 3615569  T
Q  304 ttcaatcaattctagca-nnnnnnnggtctgactattnnnnnnnnttgggtttatatgaacataatgatgaagttgatgaagatcaagaagaggaagatt 402  Q
    |||||||||||||||||        ||||||||| ||         ||||||||||||||||||||||||||| |||| |||||||||||||||||||||    
T  3615568 ttcaatcaattctagcattttttttggtctgactgttaaaaaaatctgggtttatatgaacataatgatgaagatgataaagatcaagaagaggaagatt 3615469  T
Q  403 gaaggatatgaataaatgtgaaaaagttaggtgatgatggctcactattagaaacaatagacatgcaatcaaatggttaaaatcgcatcatgaatattaa 502  Q
    |||||| ||||||||| |||||||||||||||||||||||||| ||||||||||           |||||||||||||||||||||||||||||||||||    
T  3615468 gaaggagatgaataaaggtgaaaaagttaggtgatgatggctcgctattagaaa-----------caatcaaatggttaaaatcgcatcatgaatattaa 3615380  T
Q  503 aaattaaaagactaacagtgaggaccaaatcgaataacggagcaaacgttgaggggccaaaatgatgatttttagactaatgggaccaaaacgaacactg 602  Q
    |||||||||||||||| |||||||||||||||||||| ||||||||||||||||| |||||||||||||||||| ||| ||||||||||||||||  |||    
T  3615379 aaattaaaagactaacggtgaggaccaaatcgaataatggagcaaacgttgagggaccaaaatgatgatttttatacttatgggaccaaaacgaaatctg 3615280  T
Q  603 agaattagttgagggatcatttgattaatttag 635  Q
    |||||||||||||||| ||||||||||||||||    
T  3615279 agaattagttgagggaccatttgattaatttag 3615247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 290; E-Value: 1e-162
Query Start/End: Original strand, 1 - 375
Target Start/End: Complemental strand, 52077141 - 52076767
Alignment:
Q  1 agtgatgcatccattgttcttgtgtatcacgaggtataacaacaataatttgaatagcaacaataatacatgttagttgagatgcaaatctcttccctat 100  Q
    |||||||||||||||||||||||||||||||||||| |||| ||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  52077141 agtgatgcatccattgttcttgtgtatcacgaggtagaacagcaacaatttgaatagcaacaataatacatgttagtggagatgcaaatctcttccctat 52077042  T
Q  101 tgttgttaatgttttgatgggttgaatctgaattgtaggttgttgttgttggtagggatgacgaacaatggattctgatggagaataattaatggtattg 200  Q
    |||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||    
T  52077041 tgttgttaatgttttgatgggttgaatctggattttaggttgttgttgttggtagggatgaggaacaatggattctgatggagaataattaatggtgttg 52076942  T
Q  201 ttcataaaatggttttgaatttatgttagatatgcaattttgaatggatcaacaattgttctagtgatgtttatagatgaaaatttgagatttaagtgaa 300  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  52076941 ttcataaaatggttttgaatttatgttagatatgcaatttcgaatggatcaacaattgttctagtgatgtttatagatgaaaatttgagatttaagtgaa 52076842  T
Q  301 gtattcaatcaattctagcannnnnnnggtctgactattnnnnnnnnttgggtttatatgaacataatgatgaag 375  Q
    ||||||||||||||||||||       ||||||||| ||        ||||||||||||||||||||||||||||    
T  52076841 gtattcaatcaattctagcatttttttggtctgactgttaaaaaaatttgggtttatatgaacataatgatgaag 52076767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 220; E-Value: 1e-120
Query Start/End: Original strand, 396 - 635
Target Start/End: Complemental strand, 52076770 - 52076531
Alignment:
Q  396 gaagattgaaggatatgaataaatgtgaaaaagttaggtgatgatggctcactattagaaacaatagacatgcaatcaaatggttaaaatcgcatcatga 495  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  52076770 gaagattgaaggagatgaataaatgtgaaaaagttaggtgatgatggctcactattagaaacaatagacatgcaatcaaatggttaaaatcgcatcatga 52076671  T
Q  496 atattaaaaattaaaagactaacagtgaggaccaaatcgaataacggagcaaacgttgaggggccaaaatgatgatttttagactaatgggaccaaaacg 595  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||    
T  52076670 atattaaaaattaaaagactaacggtgaggaccaaatcgaataacggagcaaacgttgagggaccaaaatgatgatttttggactaatgggaccaaaacg 52076571  T
Q  596 aacactgagaattagttgagggatcatttgattaatttag 635  Q
    || |||||||||||||||||||||||||||||||||||||    
T  52076570 aaaactgagaattagttgagggatcatttgattaatttag 52076531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 534 - 635
Target Start/End: Original strand, 3617512 - 3617613
Alignment:
Q  534 gaataacggagcaaacgttgaggggccaaaatgatgatttttagactaatgggaccaaaacgaacactgagaattagttgagggatcatttgattaattt 633  Q
    |||||||||||||||||||||||| |||||||||||||||||| ||| |||||||||||||||| |||||||||||||||||| | | || |||||||||    
T  3617512 gaataacggagcaaacgttgagggaccaaaatgatgatttttaaacttatgggaccaaaacgaaaactgagaattagttgaggaaccgttggattaattt 3617611  T
Q  634 ag 635  Q
    ||    
T  3617612 ag 3617613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 348 - 527
Target Start/End: Original strand, 48494129 - 48494304
Alignment:
Q  348 ttgggtttatatgaacataatgatgaagttgatgaagatcaagaagaggaagattgaaggatatgaataaatgtgaaaaagttaggtgatgatggctcac 447  Q
    |||||||||| |||| | |||| ||||| ||||||||||||||||     ||||||||||| ||||||||| || ||||  ||||||| |||||| ||||    
T  48494129 ttgggtttatgtgaataaaatgttgaagatgatgaagatcaagaa----tagattgaaggagatgaataaaagtcaaaagattaggtgttgatggttcac 48494224  T
Q  448 tattagaaacaatagacatgcaatcaaatggttaaaatcgcatcatgaatattaaaaattaaaagactaacagtgaggac 527  Q
     ||||||||||||||||| ||||||||| |||||||||  ||||||||| ||||   ||| |||||||||| ||||||||    
T  48494225 cattagaaacaatagacaagcaatcaaacggttaaaattacatcatgaaaattatgcatttaaagactaacggtgaggac 48494304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 523 - 635
Target Start/End: Original strand, 6049428 - 6049540
Alignment:
Q  523 aggaccaaatcgaataacggagcaaacgttgaggggccaaaatgatgatttttagactaatgggaccaaaacgaacactgagaattagttgagggatcat 622  Q
    |||||||||| |||||||| ||||||||||||||| ||||||||||||||||  |||| ||| ||||||||  || ||||  |||||||||||||| |||    
T  6049428 aggaccaaattgaataacgtagcaaacgttgagggaccaaaatgatgattttaggacttatgagaccaaaataaaaactggtaattagttgagggaccat 6049527  T
Q  623 ttgattaatttag 635  Q
    |||||||||||||    
T  6049528 ttgattaatttag 6049540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 525 - 635
Target Start/End: Original strand, 9226221 - 9226331
Alignment:
Q  525 gaccaaatcgaataacggagcaaacgttgaggggccaaaatgatgatttttagactaatgggaccaaaacgaacactgagaattagttgagggatcattt 624  Q
    |||||||| ||||||||||| ||| ||| |||||||||| |||||||||| | | | |||||||||||| ||| |||||||||||||||||||| ||||     
T  9226221 gaccaaattgaataacggagtaaaagttaaggggccaaattgatgattttaaaatttatgggaccaaaatgaaaactgagaattagttgagggaccattg 9226320  T
Q  625 gattaatttag 635  Q
     ||||||||||    
T  9226321 aattaatttag 9226331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 423 - 635
Target Start/End: Complemental strand, 6048129 - 6047919
Alignment:
Q  423 aaaaagttaggtgatgatggctcactattagaaacaatagacatgcaatcaaatggttaaaatcgcatcatgaatattaaaaattaaaagactaacagtg 522  Q
    ||||| ||||||| |||||| ||||||||||| ||||| ||| | |||||||||||||| ||||  ||||  ||  |||   |||||||  ||| | ||     
T  6048129 aaaaaattaggtgttgatggttcactattagatacaatggacctccaatcaaatggttagaatcaaatcaaaaaatttaggcattaaaaaccta-cggta 6048031  T
Q  523 aggaccaaatcgaataacggagcaaacgttgaggggccaaaatgatgatttttagactaatgggaccaaaacgaacactgagaattagttgagggatcat 622  Q
      |||||||| |||| |||||||||| |||||||  |||||||||| ||| |  |||| ||||||||||||  || ||||  ||||||||||||||||||    
T  6048030 gagaccaaattgaatgacggagcaaaagttgagga-ccaaaatgataattataggacttatgggaccaaaattaaaactggtaattagttgagggatcat 6047932  T
Q  623 ttgattaatttag 635  Q
    |||||||||||||    
T  6047931 ttgattaatttag 6047919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 534 - 635
Target Start/End: Complemental strand, 27556371 - 27556270
Alignment:
Q  534 gaataacggagcaaacgttgaggggccaaaatgatgatttttagactaatgggaccaaaacgaacactgagaattagttgagggatcatttgattaattt 633  Q
    ||||||||||||||| |||||||| |   | |||||||||| ||||| ||||||||||||  || |||||||||||||| ||||| ||||| ||||||||    
T  27556371 gaataacggagcaaaagttgagggactcgattgatgattttaagacttatgggaccaaaataaaaactgagaattagttaagggaccatttaattaattt 27556272  T
Q  634 ag 635  Q
    ||    
T  27556271 ag 27556270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 551 - 635
Target Start/End: Original strand, 52078126 - 52078210
Alignment:
Q  551 ttgaggggccaaaatgatgatttttagactaatgggaccaaaacgaacactgagaattagttgagggatcatttgattaatttag 635  Q
    |||||||  ||||||||||||||||| ||| |||||||||||| ||| | ||||||||||||||||||  ||| |||||||||||    
T  52078126 ttgagggatcaaaatgatgatttttaaacttatgggaccaaaaagaaaattgagaattagttgagggactattagattaatttag 52078210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 420 - 526
Target Start/End: Original strand, 26803120 - 26803226
Alignment:
Q  420 gtgaaaaagttaggtgatgatggctcactattagaaacaatagacatgcaatcaaatggttaaaatcgcatcatgaatattaaaaattaaaagactaaca 519  Q
    |||||||| ||||||| ||| || ||||| ||| | ||||| |||||||||||||||||||||||||  |||| |||| ||| | ||||||| |||||||    
T  26803120 gtgaaaaaattaggtggtgaaggttcactgttaaatacaatggacatgcaatcaaatggttaaaatcatatcaagaattttatacattaaaatactaaca 26803219  T
Q  520 gtgagga 526  Q
    | |||||    
T  26803220 gagagga 26803226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 420 - 529
Target Start/End: Original strand, 40110556 - 40110665
Alignment:
Q  420 gtgaaaaagttaggtgatgatggctcactattagaaacaatagacatgcaatcaaatggttaaaatcgcatcatgaatattaaaaattaaaagactaaca 519  Q
    |||||||| ||||||| ||| || ||||  ||| | ||||| |||||||||||||||||||||||||  ||||  ||| ||| | ||||||| |||||||    
T  40110556 gtgaaaaaattaggtggtgaaggttcaccgttaaatacaatggacatgcaatcaaatggttaaaatcatatcaataattttatacattaaaaaactaaca 40110655  T
Q  520 gtgaggacca 529  Q
    | ||||||||    
T  40110656 gagaggacca 40110665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 456 - 529
Target Start/End: Complemental strand, 24516510 - 24516437
Alignment:
Q  456 acaatagacatgcaatcaaatggttaaaatcgcatcatgaatattaaaaattaaaagactaacagtgaggacca 529  Q
    ||||| |||||||||||||||||||||||||  |||| |||| ||| | ||||||| |||||||| | ||||||    
T  24516510 acaatggacatgcaatcaaatggttaaaatcatatcaagaattttatacattaaaaaactaacaggggggacca 24516437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 559 - 635
Target Start/End: Complemental strand, 17190629 - 17190553
Alignment:
Q  559 ccaaaatgatgatttttagactaatgggaccaaaacgaacactgagaattagttgagggatcatttgattaatttag 635  Q
    |||||||||||||||| | ||| || ||| ||||| ||| ||||| |||||||||| |||  |||||||||||||||    
T  17190629 ccaaaatgatgattttaaaacttataggatcaaaatgaaaactgaaaattagttgaaggacaatttgattaatttag 17190553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 521 - 593
Target Start/End: Original strand, 26287786 - 26287858
Alignment:
Q  521 tgaggaccaaatcgaataacggagcaaacgttgaggggccaaaatgatgatttttagactaatgggaccaaaa 593  Q
    |||||||||||| || |||||||| ||| |||||||| |||||||| |||||||  || | ||||||||||||    
T  26287786 tgaggaccaaattgactaacggagtaaaagttgagggaccaaaatgttgattttacgaattatgggaccaaaa 26287858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 281 - 320
Target Start/End: Original strand, 48494061 - 48494100
Alignment:
Q  281 aaatttgagatttaagtgaagtattcaatcaattctagca 320  Q
    ||||||||||||||||||||| |||| |||||||||||||    
T  48494061 aaatttgagatttaagtgaaggattcgatcaattctagca 48494100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 565 - 618
Target Start/End: Original strand, 27557737 - 27557790
Alignment:
Q  565 tgatgatttttagactaatgggaccaaaacgaacactgagaattagttgaggga 618  Q
    |||||||||| ||||| |||||||||||||||| ||  |||||||||| |||||    
T  27557737 tgatgattttaagacttatgggaccaaaacgaaaacgaagaattagttaaggga 27557790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 537 - 593
Target Start/End: Original strand, 5613103 - 5613159
Alignment:
Q  537 taacggagcaaacgttgaggggccaaaatgatgatttttagactaatgggaccaaaa 593  Q
    ||||||||||||||||||||| |||| ||| |||||||  || | ||||||||||||    
T  5613103 taacggagcaaacgttgagggaccaatatgttgattttacgaattatgggaccaaaa 5613159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 537 - 593
Target Start/End: Complemental strand, 26286510 - 26286454
Alignment:
Q  537 taacggagcaaacgttgaggggccaaaatgatgatttttagactaatgggaccaaaa 593  Q
    ||||||||||||||||||||| |||| ||| |||||||  || | ||||||||||||    
T  26286510 taacggagcaaacgttgagggaccaatatgttgattttacgaattatgggaccaaaa 26286454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 258; Significance: 1e-143; HSPs: 17)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 258; E-Value: 1e-143
Query Start/End: Original strand, 1 - 408
Target Start/End: Original strand, 16756997 - 16757402
Alignment:
Q  1 agtgatgcatccattgttcttgtgtatcacgaggtataacaacaataatttgaatagcaacaataatacatgttagttgagatgcaaatctcttccctat 100  Q
    ||||||||||||||||||||||||||||||||||||||||| ||| | ||||||||||||||||||||||||||||| |||||| ||||||||||| |||    
T  16756997 agtgatgcatccattgttcttgtgtatcacgaggtataacagcaaaactttgaatagcaacaataatacatgttagtggagatgtaaatctcttccttat 16757096  T
Q  101 tgttgttaatgttttgatgggttgaatctgaattgtaggttgttgttgttggtagggatgacgaacaatggattctgatggagaataattaatggtattg 200  Q
    |||||||||||||||||||||||||||||| ||| ||||| ||||   ||||||||||||| ||||||||| || ||||||||||||||||||||| |||    
T  16757097 tgttgttaatgttttgatgggttgaatctggattttaggtggttg---ttggtagggatgaggaacaatgggttttgatggagaataattaatggtgttg 16757193  T
Q  201 ttcataaaatggttttgaatttatgttagatatgcaattttgaatggatcaacaattgttctagtgatgtttatagatgaaaatttgagatttaagtgaa 300  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||    
T  16757194 ttcataaaatggttttgaatttatgttagatatgcaatttcgaatggatctgcaattgttctagtgatgtttatagatgaaaatttgagatttaagtgaa 16757293  T
Q  301 gtattcaatcaattctagcannnnnnnggtctgactattnnnnnnnnttgggtttatatgaacataatgatgaagttgatgaagatcaagaagagg-aag 399  Q
    ||||||||||||||||||||       ||||||||| ||          |||||||| ||||||||||||||||| |||||||||||||||||||| |||    
T  16757294 gtattcaatcaattctagcatttttttggtctgactgttaaaaaaatcagggtttatgtgaacataatgatgaagatgatgaagatcaagaagaggaaag 16757393  T
Q  400 attgaagga 408  Q
    |||||||||    
T  16757394 attgaagga 16757402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 534 - 635
Target Start/End: Complemental strand, 16755972 - 16755871
Alignment:
Q  534 gaataacggagcaaacgttgaggggccaaaatgatgatttttagactaatgggaccaaaacgaacactgagaattagttgagggatcatttgattaattt 633  Q
    ||||||||||||||||||||||||  ||||||||||||||||| ||| ||||||||||||| || |||||||||||||||||||| ||||  ||||||||    
T  16755972 gaataacggagcaaacgttgagggatcaaaatgatgatttttaaacttatgggaccaaaacaaaaactgagaattagttgagggaccattaaattaattt 16755873  T
Q  634 ag 635  Q
    ||    
T  16755872 ag 16755871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 469 - 618
Target Start/End: Original strand, 29589220 - 29589369
Alignment:
Q  469 aatcaaatggttaaaatcgcatcatgaatattaaaaattaaaagactaacagtgaggaccaaatcgaataacggagcaaacgttgaggggccaaaatgat 568  Q
    ||||||||||||||||||  ||||  ||| ||||| ||||||| |||||| |||  ||||||||  |||||||||||||| ||||||||  |||||||||    
T  29589220 aatcaaatggttaaaatcaaatcaaaaattttaaacattaaaaaactaactgtggcgaccaaattaaataacggagcaaaagttgagggagcaaaatgat 29589319  T
Q  569 gatttttagactaatgggaccaaaacgaacactgagaattagttgaggga 618  Q
    |||||| ||||| || ||||||||| ||| |||| |||||||||||||||    
T  29589320 gattttaagacttattggaccaaaatgaaaactgggaattagttgaggga 29589369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 352 - 527
Target Start/End: Complemental strand, 44553478 - 44553307
Alignment:
Q  352 gtttatatgaacataatgatgaagttgatgaagatcaagaagaggaagattgaaggatatgaataaatgtgaaaaagttaggtgatgatggctcactatt 451  Q
    |||||| |||| | |||| ||||| ||||||||||||| ||     ||||||||||| ||||||||| || ||||  ||||||| |||||| |||| |||    
T  44553478 gtttatgtgaataaaatgttgaagatgatgaagatcaataa----tagattgaaggagatgaataaaagtcaaaagattaggtgttgatggttcaccatt 44553383  T
Q  452 agaaacaatagacatgcaatcaaatggttaaaatcgcatcatgaatattaaaaattaaaagactaacagtgaggac 527  Q
    |||||||||||||| ||||||||| |||||||||  ||||||||| ||||   ||| |||||||||| ||||||||    
T  44553382 agaaacaatagacaagcaatcaaacggttaaaattacatcatgaaaattatgcatttaaagactaacggtgaggac 44553307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 537 - 634
Target Start/End: Original strand, 3332175 - 3332272
Alignment:
Q  537 taacggagcaaacgttgaggggccaaaatgatgatttttagactaatgggaccaaaacgaacactgagaattagttgagggatcatttgattaattta 634  Q
    ||||||||||||||||||||| ||||| ||||||||||   | | |||||||||||| ||| ||||  |||||||||||||| |||||||||||||||    
T  3332175 taacggagcaaacgttgagggaccaaattgatgattttagaatttatgggaccaaaatgaaaactgttaattagttgagggaccatttgattaattta 3332272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 559 - 635
Target Start/End: Original strand, 48312693 - 48312769
Alignment:
Q  559 ccaaaatgatgatttttagactaatgggaccaaaacgaacactgagaattagttgagggatcatttgattaatttag 635  Q
    |||||||||||||||| ||| | |||||||||||| ||| |||| |||||||||||| || ||||||||||||||||    
T  48312693 ccaaaatgatgattttaagatttatgggaccaaaatgaaaactgtgaattagttgagagaccatttgattaatttag 48312769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 525 - 635
Target Start/End: Complemental strand, 3330802 - 3330692
Alignment:
Q  525 gaccaaatcgaataacggagcaaacgttgaggggccaaaatgatgatttttagactaatgggaccaaaacgaacactgagaattagttgagggatcattt 624  Q
    |||||||| ||||| ||||||||| |||||||| || ||||| ||||||| ||||| | | |||||||| ||| |  |  |||||||||||||| |||||    
T  3330802 gaccaaattgaatagcggagcaaatgttgagggaccgaaatggtgattttaagacttaagagaccaaaatgaaaatgggaaattagttgagggaccattt 3330703  T
Q  625 gattaatttag 635  Q
    |||||||||||    
T  3330702 gattaatttag 3330692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 534 - 635
Target Start/End: Complemental strand, 9081494 - 9081393
Alignment:
Q  534 gaataacggagcaaacgttgaggggccaaaatgatgatttttagactaatgggaccaaaacgaacactgagaattagttgagggatcatttgattaattt 633  Q
    |||||| |||||||| ||||||||  |||| ||||||||||  |||| |||||||||||| ||| || |  |||||||||||||| |||| |||||||||    
T  9081494 gaataaaggagcaaaagttgagggagcaaattgatgattttatgacttatgggaccaaaatgaaaaccggaaattagttgagggaccattggattaattt 9081395  T
Q  634 ag 635  Q
    ||    
T  9081394 ag 9081393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 534 - 635
Target Start/End: Complemental strand, 44372830 - 44372729
Alignment:
Q  534 gaataacggagcaaacgttgaggggccaaaatgatgatttttagactaatgggaccaaaacgaacactgagaattagttgagggatcatttgattaattt 633  Q
    ||||||||||||||| || ||||| |||||||||| ||||| ||| | ||| |||||||| ||| |||   |||||||||||||| ||||||| ||||||    
T  44372830 gaataacggagcaaaagtcgagggaccaaaatgataattttaagagttatgagaccaaaatgaaaactcgaaattagttgagggaccatttgactaattt 44372731  T
Q  634 ag 635  Q
    ||    
T  44372730 ag 44372729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 534 - 635
Target Start/End: Complemental strand, 44381686 - 44381585
Alignment:
Q  534 gaataacggagcaaacgttgaggggccaaaatgatgatttttagactaatgggaccaaaacgaacactgagaattagttgagggatcatttgattaattt 633  Q
    ||||||||||||||| || ||||| |||||||||| ||||| ||| | ||| |||||||| ||| |||   |||||||||||||| ||||||| ||||||    
T  44381686 gaataacggagcaaaagtcgagggaccaaaatgataattttaagagttatgagaccaaaatgaaaactcgaaattagttgagggaccatttgactaattt 44381587  T
Q  634 ag 635  Q
    ||    
T  44381586 ag 44381585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 541 - 635
Target Start/End: Original strand, 44376710 - 44376804
Alignment:
Q  541 ggagcaaacgttgaggggccaaaatgatgatttttagactaatgggaccaaaacgaacactgagaattagttgagggatcatttgattaatttag 635  Q
    |||||||| ||| |||| |||||||||||||||| | | | ||||||||||||| || | |   |||||||||||||| ||||||||||||||||    
T  44376710 ggagcaaaagttaagggaccaaaatgatgattttaaaagttatgggaccaaaacaaaaattcgaaattagttgagggaccatttgattaatttag 44376804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 541 - 635
Target Start/End: Original strand, 44385577 - 44385671
Alignment:
Q  541 ggagcaaacgttgaggggccaaaatgatgatttttagactaatgggaccaaaacgaacactgagaattagttgagggatcatttgattaatttag 635  Q
    |||||||| ||| |||| |||||||||||||||| | | | ||||||||||||| || | |   |||||||||||||| ||||||||||||||||    
T  44385577 ggagcaaaagttaagggaccaaaatgatgattttaaaagttatgggaccaaaacaaaaattcgaaattagttgagggaccatttgattaatttag 44385671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 582 - 635
Target Start/End: Original strand, 16757422 - 16757475
Alignment:
Q  582 atgggaccaaaacgaacactgagaattagttgagggatcatttgattaatttag 635  Q
    |||||| ||||||||| | |||||||||||||||||| ||||||||||||||||    
T  16757422 atgggatcaaaacgaaaattgagaattagttgagggaccatttgattaatttag 16757475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 281 - 320
Target Start/End: Complemental strand, 44553550 - 44553511
Alignment:
Q  281 aaatttgagatttaagtgaagtattcaatcaattctagca 320  Q
    ||||||||||||||||||||| ||||||||||||||||||    
T  44553550 aaatttgagatttaagtgaaggattcaatcaattctagca 44553511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 429 - 591
Target Start/End: Original strand, 43442673 - 43442835
Alignment:
Q  429 ttaggtgatgatggctcactattagaaacaatagacatgcaatcaaatggttaaaatcgcatcatgaatattaaaaattaaaagactaacagtgaggacc 528  Q
    ||||||| ||| || ||||| ||| | ||||  ||||||||||||||| |||||||||  ||||  ||  ||| | |||||||||||||| | | |||||    
T  43442673 ttaggtgctgacggttcactgttaaatacaacggacatgcaatcaaattgttaaaatcaaatcaaaaaatttagacattaaaagactaacggaggggacc 43442772  T
Q  529 aaatcgaataacggagcaaacgttgaggggccaaaatgatgatttttagactaatgggaccaa 591  Q
    |||| || ||||||||||||    ||||| |||||||| |||||||  || | ||||||||||    
T  43442773 aaattgactaacggagcaaaacaagagggaccaaaatgttgattttacgagttatgggaccaa 43442835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 423 - 486
Target Start/End: Original strand, 17288149 - 17288212
Alignment:
Q  423 aaaaagttaggtgatgatggctcactattagaaacaatagacatgcaatcaaatggttaaaatc 486  Q
    ||||| ||||||| ||| || ||||||||| | ||||| ||||||||||||||| |||||||||    
T  17288149 aaaaaattaggtgctgacggttcactattaaatacaatggacatgcaatcaaatagttaaaatc 17288212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 560 - 631
Target Start/End: Complemental strand, 48312099 - 48312028
Alignment:
Q  560 caaaatgatgatttttagactaatgggaccaaaacgaacactgagaattagttgagggatcatttgattaat 631  Q
    ||||||||||||||| ||| | |||||| ||||| ||  ||||| |||||||||||||| |||| |||||||    
T  48312099 caaaatgatgattttaagatttatgggatcaaaatgagaactgaaaattagttgagggaccattagattaat 48312028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 62; Significance: 2e-26; HSPs: 23)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 423 - 635
Target Start/End: Complemental strand, 49895253 - 49895040
Alignment:
Q  423 aaaaagttaggtgatgatggctcactattagaaacaatagacatgcaatcaaatggttaaaatcgcatcatgaatattaaaaattaaaagactaacagtg 522  Q
    ||||| ||||||| |||||| ||||||||||| ||||  ||| |||||||||||||||| ||||  ||||  || ||||   ||||| | |||||| ||     
T  49895253 aaaaaattaggtgttgatggttcactattagatacaacggacctgcaatcaaatggttagaatcaaatcaaaaaaattaggcattaagaaactaacggta 49895154  T
Q  523 aggaccaaatcgaataacggagcaaacgttgagggg-ccaaaatgatgatttttagactaatgggaccaaaacgaacactgagaattagttgagggatca 621  Q
      |||||||| |||| |||||||||| ||||||||| |||||||||| ||| |   ||| |||||||||||| ||| ||||  |||||||||||||| ||    
T  49895153 gagaccaaattgaatgacggagcaaaagttgaggggaccaaaatgataattatagaacttatgggaccaaaatgaaaactggtaattagttgagggacca 49895054  T
Q  622 tttgattaatttag 635  Q
    ||||||||||||||    
T  49895053 tttgattaatttag 49895040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 523 - 635
Target Start/End: Complemental strand, 56085459 - 56085347
Alignment:
Q  523 aggaccaaatcgaataacggagcaaacgttgaggggccaaaatgatgatttttagactaatgggaccaaaacgaacactgagaattagttgagggatcat 622  Q
    |||||||||| |||||||| ||||||| ||||||| |||||||||||||||| ||||| ||| |||||||| ||| ||||  |||||||||| ||| |||    
T  56085459 aggaccaaattgaataacgaagcaaacattgagggaccaaaatgatgattttaagacttatgagaccaaaatgaaaactggtaattagttgatggaccat 56085360  T
Q  623 ttgattaatttag 635  Q
    |||||||||||||    
T  56085359 ttgattaatttag 56085347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 550 - 635
Target Start/End: Original strand, 4872262 - 4872347
Alignment:
Q  550 gttgaggggccaaaatgatgatttttagactaatgggaccaaaacgaacactgagaattagttgagggatcatttgattaatttag 635  Q
    |||||||| ||||| |||||||||| ||||| |||||||||||| ||| |||||||||||||||||||| |||| |||||||||||    
T  4872262 gttgagggaccaaattgatgattttaagacttatgggaccaaaatgaaaactgagaattagttgagggaccattggattaatttag 4872347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 534 - 635
Target Start/End: Original strand, 23104022 - 23104123
Alignment:
Q  534 gaataacggagcaaacgttgaggggccaaaatgatgatttttagactaatgggaccaaaacgaacactgagaattagttgagggatcatttgattaattt 633  Q
    ||||||||||||||| |||||||| |   | |||||||||| ||||| ||| |||||||| ||| |||||||||||||||||||| ||||||||||||||    
T  23104022 gaataacggagcaaaagttgagggactcgattgatgattttaagacttatgagaccaaaatgaaaactgagaattagttgagggaccatttgattaattt 23104121  T
Q  634 ag 635  Q
    ||    
T  23104122 ag 23104123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 534 - 635
Target Start/End: Complemental strand, 44498561 - 44498460
Alignment:
Q  534 gaataacggagcaaacgttgaggggccaaaatgatgatttttagactaatgggaccaaaacgaacactgagaattagttgagggatcatttgattaattt 633  Q
    ||||||| ||||||| |||||||| |||||||||||||||| ||| | |||||||||||||||| |||   ||||| |||||||| ||||| ||||||||    
T  44498561 gaataacagagcaaaagttgagggaccaaaatgatgattttaagagttatgggaccaaaacgaaaactcgaaattaattgagggaccatttcattaattt 44498462  T
Q  634 ag 635  Q
    ||    
T  44498461 ag 44498460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 534 - 635
Target Start/End: Complemental strand, 45535147 - 45535046
Alignment:
Q  534 gaataacggagcaaacgttgaggggccaaaatgatgatttttagactaatgggaccaaaacgaacactgagaattagttgagggatcatttgattaattt 633  Q
    ||||||| ||||||| |||||||| |   | |||||||||| ||||| |||||||||||| ||| ||||||||||||||||||||  |||||||||||||    
T  45535147 gaataacagagcaaaagttgagggactcgattgatgattttaagacttatgggaccaaaatgaaaactgagaattagttgagggactatttgattaattt 45535048  T
Q  634 ag 635  Q
    ||    
T  45535047 ag 45535046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 423 - 635
Target Start/End: Original strand, 44499889 - 44500100
Alignment:
Q  423 aaaaagttaggtgatgatggctcactattagaaacaatagacatgcaatcaaatggttaaaatcgcatcatgaatattaaaaattaaaagactaacagtg 522  Q
    ||||| ||||||| ||| || ||||||| ||| ||||| |||||||||||||| ||||||||||  ||||  ||   || | ||||| | |||||| | |    
T  44499889 aaaaaattaggtgctgacggttcactat-agatacaatggacatgcaatcaaacggttaaaatcaaatcaaaaaatatagacattaacaaactaacggag 44499987  T
Q  523 aggaccaaatcgaataacggagcaaacgttgaggggccaaaatgatgatttttagactaatgggaccaaaacgaacactgagaattagttgagggatcat 622  Q
     ||| ||| | || |||||||||||| ||| |||| |||||||||||||||| ||| | |||||||||||||||| |||   ||||| ||||||||  ||    
T  44499988 tggatcaatttgactaacggagcaaaagttaagggaccaaaatgatgattttaagagttatgggaccaaaacgaaaactcgaaattaattgagggacaat 44500087  T
Q  623 ttgattaatttag 635  Q
    || ||||||||||    
T  44500088 ttcattaatttag 44500100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 423 - 486
Target Start/End: Complemental strand, 47667387 - 47667324
Alignment:
Q  423 aaaaagttaggtgatgatggctcactattagaaacaatagacatgcaatcaaatggttaaaatc 486  Q
    ||||| ||||||| ||| || ||||||||||| ||||| |||||||||||||||||||||||||    
T  47667387 aaaaaattaggtgctgacggttcactattagatacaatggacatgcaatcaaatggttaaaatc 47667324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 429 - 486
Target Start/End: Complemental strand, 3528393 - 3528336
Alignment:
Q  429 ttaggtgatgatggctcactattagaaacaatagacatgcaatcaaatggttaaaatc 486  Q
    ||||||| ||| || ||||||||||| ||||| |||||||||||||||||||||||||    
T  3528393 ttaggtgttgacggttcactattagatacaatggacatgcaatcaaatggttaaaatc 3528336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 534 - 635
Target Start/End: Complemental strand, 4871595 - 4871494
Alignment:
Q  534 gaataacggagcaaacgttgaggggccaaaatgatgatttttagactaatgggaccaaaacgaacactgagaattagttgagggatcatttgattaattt 633  Q
    |||||||||||||||| |||| || | ||| |||||||||| ||||| ||| |||||||| ||| | || ||||||||||||||  ||||  ||||||||    
T  4871595 gaataacggagcaaacattgaaggactaaattgatgattttaagacttatgagaccaaaatgaaaattgggaattagttgaggggccattgaattaattt 4871496  T
Q  634 ag 635  Q
    ||    
T  4871495 ag 4871494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 535 - 635
Target Start/End: Original strand, 19750309 - 19750409
Alignment:
Q  535 aataacggagcaaacgttgaggggccaaaatgatgatttttagactaatgggaccaaaacgaacactgagaattagttgagggatcatttgattaattta 634  Q
    ||||||| |||||| ||||| || | |||||||||||||| | ||| |||||| ||||| ||| |||   |||||||||||||| |||| ||||||||||    
T  19750309 aataacgaagcaaaagttgaaggactaaaatgatgattttaaaacttatgggatcaaaatgaaaactagtaattagttgagggaccattggattaattta 19750408  T
Q  635 g 635  Q
    |    
T  19750409 g 19750409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 535 - 635
Target Start/End: Complemental strand, 19789497 - 19789397
Alignment:
Q  535 aataacggagcaaacgttgaggggccaaaatgatgatttttagactaatgggaccaaaacgaacactgagaattagttgagggatcatttgattaattta 634  Q
    ||||||| |||||| ||||| || | |||||||||||||| | ||| |||||| ||||| ||| |||   |||||||||||||| |||| ||||||||||    
T  19789497 aataacgaagcaaaagttgaaggactaaaatgatgattttaaaacttatgggatcaaaatgaaaactagtaattagttgagggaccattggattaattta 19789398  T
Q  635 g 635  Q
    |    
T  19789397 g 19789397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 444 - 486
Target Start/End: Original strand, 56001197 - 56001239
Alignment:
Q  444 tcactattagaaacaatagacatgcaatcaaatggttaaaatc 486  Q
    ||||||||||| ||||| |||||||||||||||||||||||||    
T  56001197 tcactattagatacaatggacatgcaatcaaatggttaaaatc 56001239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 423 - 548
Target Start/End: Original strand, 26631123 - 26631248
Alignment:
Q  423 aaaaagttaggtgatgatggctcactattagaaacaatagacatgcaatcaaatggttaaaatcgcatcatgaatattaaaaattaaaagactaacagtg 522  Q
    ||||| ||||||| |||||  ||||| ||| | ||||||||||||||||||| |||||||||||  ||||  ||  ||| | |||||| ||| ||| | |    
T  26631123 aaaaaattaggtgctgatgattcactgttaaatacaatagacatgcaatcaagtggttaaaatcaaatcaaaaaatttagacattaaaggacaaacggag 26631222  T
Q  523 aggaccaaatcgaataacggagcaaa 548  Q
     ||||||||| || ||||||||||||    
T  26631223 gggaccaaattgactaacggagcaaa 26631248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 423 - 492
Target Start/End: Original strand, 29665481 - 29665550
Alignment:
Q  423 aaaaagttaggtgatgatggctcactattagaaacaatagacatgcaatcaaatggttaaaatcgcatca 492  Q
    ||||| ||||||  ||| || |||| |||||| ||||| ||||||||||||||||||||||||| |||||    
T  29665481 aaaaaattaggtattgacggttcacaattagatacaatggacatgcaatcaaatggttaaaatcacatca 29665550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 537 - 593
Target Start/End: Complemental strand, 26629889 - 26629833
Alignment:
Q  537 taacggagcaaacgttgaggggccaaaatgatgatttttagactaatgggaccaaaa 593  Q
    ||||||||||||||||||||| |||||||| |||||||  || | ||||||||||||    
T  26629889 taacggagcaaacgttgagggaccaaaatgttgattttatgagttatgggaccaaaa 26629833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 599 - 635
Target Start/End: Complemental strand, 31712706 - 31712670
Alignment:
Q  599 actgagaattagttgagggatcatttgattaatttag 635  Q
    |||||||||||||||||||| ||||||||||||||||    
T  31712706 actgagaattagttgagggaccatttgattaatttag 31712670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 423 - 486
Target Start/End: Original strand, 46795933 - 46795996
Alignment:
Q  423 aaaaagttaggtgatgatggctcactattagaaacaatagacatgcaatcaaatggttaaaatc 486  Q
    ||||| |||||||  || || ||||||||| | ||||| |||||||||||||||||||||||||    
T  46795933 aaaaaattaggtgccgacggttcactattaaatacaatggacatgcaatcaaatggttaaaatc 46795996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 446 - 492
Target Start/End: Complemental strand, 26376496 - 26376450
Alignment:
Q  446 actattagaaacaatagacatgcaatcaaatggttaaaatcgcatca 492  Q
    ||||||||| |||||  |||||||||||||||||||||||| |||||    
T  26376496 actattagatacaatgtacatgcaatcaaatggttaaaatcacatca 26376450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 565 - 618
Target Start/End: Complemental strand, 23102652 - 23102599
Alignment:
Q  565 tgatgatttttagactaatgggaccaaaacgaacactgagaattagttgaggga 618  Q
    |||||||||| ||||| |||||||||||||||| ||  |||||||||| |||||    
T  23102652 tgatgattttaagacttatgggaccaaaacgaaaacgaagaattagttaaggga 23102599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 420 - 529
Target Start/End: Complemental strand, 41348451 - 41348342
Alignment:
Q  420 gtgaaaaagttaggtgatgatggctcactattagaaacaatagacatgcaatcaaatggttaaaatcgcatcatgaatattaaaaattaaaagactaaca 519  Q
    |||||||| ||||||| ||| || ||||  ||| | ||||| |||||||||||||||| ||||||||  ||||  ||| ||| | ||||||| ||||| |    
T  41348451 gtgaaaaaattaggtggtgaaggttcaccgttaaatacaatggacatgcaatcaaatgattaaaatcatatcaaaaattttatacattaaaaaactaata 41348352  T
Q  520 gtgaggacca 529  Q
    | ||||||||    
T  41348351 gagaggacca 41348342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 565 - 618
Target Start/End: Original strand, 45536519 - 45536572
Alignment:
Q  565 tgatgatttttagactaatgggaccaaaacgaacactgagaattagttgaggga 618  Q
    |||||||||| ||||| |||||||||||||||| ||  |||||||||| |||||    
T  45536519 tgatgattttaagacttatgggaccaaaacgaaaacgaagaattagttaaggga 45536572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 599 - 635
Target Start/End: Complemental strand, 31711042 - 31711006
Alignment:
Q  599 actgagaattagttgagggatcatttgattaatttag 635  Q
    |||||||||||||||||||| |||||||| |||||||    
T  31711042 actgagaattagttgagggaccatttgataaatttag 31711006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 60; Significance: 3e-25; HSPs: 18)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 423 - 634
Target Start/End: Complemental strand, 24191588 - 24191378
Alignment:
Q  423 aaaaagttaggtgatgatggctcactattagaaacaatagacatgcaatcaaatggttaaaatcgcatcatgaatattaaaaattaaaagactaacagtg 522  Q
    ||||| ||||||| ||| || ||||||| ||| ||||| |||||||||||||| ||||||||||  ||||  ||  ||| | ||||| | |||||| | |    
T  24191588 aaaaaattaggtgctgacggttcactat-agatacaatggacatgcaatcaaacggttaaaatcaaatcaaaaaatttagacattaacaaactaacggag 24191490  T
Q  523 aggaccaaatcgaataacggagcaaacgttgaggggccaaaatgatgatttttagactaatgggaccaaaacgaacactgagaattagttgagggatcat 622  Q
     ||| ||| | || |||| ||||||| ||| || | |||||||||||||||| ||| | |||||||||||||||| |||   ||||||||||||||||||    
T  24191489 tggatcaatttgagtaacagagcaaaagttaagagaccaaaatgatgattttaagagttatgggaccaaaacgaaaactcgaaattagttgagggatcat 24191390  T
Q  623 ttgattaattta 634  Q
    ||||||||||||    
T  24191389 ttgattaattta 24191378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 534 - 635
Target Start/End: Original strand, 39174742 - 39174843
Alignment:
Q  534 gaataacggagcaaacgttgaggggccaaaatgatgatttttagactaatgggaccaaaacgaacactgagaattagttgagggatcatttgattaattt 633  Q
    ||||||||||||||| |||||||| |||||||||||||||| | ||| || ||||||||| ||| ||| | |||||||||||||| ||||||||||||||    
T  39174742 gaataacggagcaaaagttgagggaccaaaatgatgattttaaaacttataggaccaaaatgaaaacttataattagttgagggaccatttgattaattt 39174841  T
Q  634 ag 635  Q
    ||    
T  39174842 ag 39174843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 534 - 635
Target Start/End: Original strand, 10669460 - 10669561
Alignment:
Q  534 gaataacggagcaaacgttgaggggccaaaatgatgatttttagactaatgggaccaaaacgaacactgagaattagttgagggatcatttgattaattt 633  Q
    |||||||||||||||||||||||  |||||||| ||||||| ||| | |||||||||||| ||| ||| | ||||||||||||||  ||| |||||||||    
T  10669460 gaataacggagcaaacgttgaggtaccaaaatgttgattttaagatttatgggaccaaaatgaaaactcaaaattagttgagggactattggattaattt 10669559  T
Q  634 ag 635  Q
    ||    
T  10669560 ag 10669561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 525 - 635
Target Start/End: Complemental strand, 10668079 - 10667969
Alignment:
Q  525 gaccaaatcgaataacggagcaaacgttgaggggccaaaatgatgatttttagactaatgggaccaaaacgaacactgagaattagttgagggatcattt 624  Q
    |||||||| || |||| ||||||| |||||||| |||||||| ||||||| | | | |||||||||||| ||| |||   |||||||||||||| |||||    
T  10668079 gaccaaattgactaacagagcaaatgttgagggaccaaaatgctgattttaaaatttatgggaccaaaatgaaaactcgaaattagttgagggaccattt 10667980  T
Q  625 gattaatttag 635  Q
    |||||||||||    
T  10667979 gattaatttag 10667969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 538 - 635
Target Start/End: Original strand, 32553926 - 32554023
Alignment:
Q  538 aacggagcaaacgttgaggggccaaaatgatgatttttagactaatgggaccaaaacgaacactgagaattagttgagggatcatttgattaatttag 635  Q
    ||||||||||| |||||||| ||||||||| |||||| ||||| || ||| ||||| ||| |||   |||||||||||||| ||||||||||||||||    
T  32553926 aacggagcaaaagttgagggaccaaaatgacgattttaagacttataggatcaaaatgaaaactcgtaattagttgagggaccatttgattaatttag 32554023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 538 - 635
Target Start/End: Complemental strand, 39173213 - 39173116
Alignment:
Q  538 aacggagcaaacgttgaggggccaaaatgatgatttttagactaatgggaccaaaacgaacactgagaattagttgagggatcatttgattaatttag 635  Q
    ||||||||||| |||||||| ||||||||| |||||| ||||| || ||||||||| ||| |||   ||||| |||||||| ||||||||||||||||    
T  39173213 aacggagcaaaagttgagggaccaaaatgacgattttaagacttataggaccaaaatgaaaactcgtaattaattgagggaccatttgattaatttag 39173116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 550 - 634
Target Start/End: Complemental strand, 7844796 - 7844712
Alignment:
Q  550 gttgaggggccaaaatgatgatttttagactaatgggaccaaaacgaacactgagaattagttgagggatcatttgattaattta 634  Q
    |||||||| |||||||||||||||| ||||| |||||||||||| ||| ||||  |||||||| ||||| |||| ||||||||||    
T  7844796 gttgagggaccaaaatgatgattttaagacttatgggaccaaaatgaaaactggtaattagttaagggaccattggattaattta 7844712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 538 - 634
Target Start/End: Original strand, 35800998 - 35801094
Alignment:
Q  538 aacggagcaaacgttgaggggccaaaatgatgatttttagactaatgggaccaaaacgaacactgagaattagttgagggatcatttgattaattta 634  Q
    ||||||||||| |||||||| | ||||||| |||||| ||||| || ||||||||| ||| |||   |||||||||||||| |||||||||||||||    
T  35800998 aacggagcaaaagttgagggactaaaatgacgattttaagacttataggaccaaaatgaaaactcgtaattagttgagggaccatttgattaattta 35801094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 537 - 634
Target Start/End: Original strand, 24192681 - 24192778
Alignment:
Q  537 taacggagcaaacgttgaggggccaaaatgatgatttttagactaatgggaccaaaacgaacactgagaattagttgagggatcatttgattaattta 634  Q
    |||||||| ||| |||||| | |||||||||||||||| ||| | |||||||||||||||| |||   ||||| |||||||| ||||| |||||||||    
T  24192681 taacggagtaaaagttgagagaccaaaatgatgattttaagagttatgggaccaaaacgaaaactcgaaattaattgagggaccatttaattaattta 24192778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 423 - 548
Target Start/End: Complemental strand, 31844580 - 31844455
Alignment:
Q  423 aaaaagttaggtgatgatggctcactattagaaacaatagacatgcaatcaaatggttaaaatcgcatcatgaatattaaaaattaaaagactaacagtg 522  Q
    ||||| ||||||| |||||| ||||| |||   ||||||||||||||||||| |||||||||||  ||||  ||| ||| |||||||| ||| ||| | |    
T  31844580 aaaaaattaggtgctgatggttcactgttaattacaatagacatgcaatcaagtggttaaaatcaaatcaaaaattttagaaattaaaggacaaacggag 31844481  T
Q  523 aggaccaaatcgaataacggagcaaa 548  Q
     ||||||||| || ||||||||||||    
T  31844480 gggaccaaattgactaacggagcaaa 31844455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 538 - 635
Target Start/End: Complemental strand, 32552393 - 32552296
Alignment:
Q  538 aacggagcaaacgttgaggggccaaaatgatgatttttagactaatgggaccaaaacgaacactgagaattagttgagggatcatttgattaatttag 635  Q
    ||||||||||| |||||||| ||||||||| |||||| ||||| || ||| ||||| ||| |||   |||||||||||||| |||| |||||||||||    
T  32552393 aacggagcaaaagttgagggaccaaaatgacgattttaagacttataggatcaaaatgaaaactcgtaattagttgagggaccattagattaatttag 32552296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 534 - 635
Target Start/End: Complemental strand, 35799552 - 35799452
Alignment:
Q  534 gaataacggagcaaacgttgaggggccaaaatgatgatttttagactaatgggaccaaaacgaacactgagaattagttgagggatcatttgattaattt 633  Q
    ||||||||||||||| |||||||| |||||||||| ||||| ||||| ||  |||||||| ||| |||   |||||||||| ||| ||||||||||||||    
T  35799552 gaataacggagcaaaagttgagggaccaaaatgataattttaagacttataagaccaaaatgaaaacttgtaattagttga-ggaccatttgattaattt 35799454  T
Q  634 ag 635  Q
    ||    
T  35799453 ag 35799452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 420 - 529
Target Start/End: Original strand, 22621038 - 22621147
Alignment:
Q  420 gtgaaaaagttaggtgatgatggctcactattagaaacaatagacatgcaatcaaatggttaaaatcgcatcatgaatattaaaaattaaaagactaaca 519  Q
    |||||||| ||||||| ||| || ||||  ||| | ||||| |||||||||||||||| ||||||||  |||| |||| ||| | ||||||| |||||||    
T  22621038 gtgaaaaaattaggtggtgaaggttcaccgttaaatacaatggacatgcaatcaaatgattaaaatcatatcaagaattttatacattaaaaaactaaca 22621137  T
Q  520 gtgaggacca 529  Q
    | ||||||||    
T  22621138 gagaggacca 22621147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 444 - 486
Target Start/End: Original strand, 39516425 - 39516467
Alignment:
Q  444 tcactattagaaacaatagacatgcaatcaaatggttaaaatc 486  Q
    ||||||||||| ||||| |||||||||||||||||||||||||    
T  39516425 tcactattagatacaatggacatgcaatcaaatggttaaaatc 39516467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 537 - 593
Target Start/End: Original strand, 31845812 - 31845868
Alignment:
Q  537 taacggagcaaacgttgaggggccaaaatgatgatttttagactaatgggaccaaaa 593  Q
    ||||||||||||||||||||| |||||||| |||||||  || | ||||||||||||    
T  31845812 taacggagcaaacgttgagggaccaaaatgttgattttatgagttatgggaccaaaa 31845868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 445 - 527
Target Start/End: Complemental strand, 2075562 - 2075480
Alignment:
Q  445 cactattagaaacaatagacatgcaatcaaatggttaaaatcgcatcatgaatattaaaaattaaaagactaacagtgaggac 527  Q
    |||||||||| |||||  || ||||||||| ||||||||||| ||||||  |||||| | ||||||| | |||| ||||||||    
T  2075562 cactattagatacaatgaacctgcaatcaagtggttaaaatcacatcatacatattatacattaaaaaattaacggtgaggac 2075480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 424 - 478
Target Start/End: Complemental strand, 24068526 - 24068472
Alignment:
Q  424 aaaagttaggtgatgatggctcactattagaaacaatagacatgcaatcaaatgg 478  Q
    |||| ||||||| ||| || ||||||||||| ||||| |||||||||||||||||    
T  24068526 aaaaattaggtgctgacggttcactattagatacaatggacatgcaatcaaatgg 24068472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 550 - 635
Target Start/End: Original strand, 35070688 - 35070773
Alignment:
Q  550 gttgaggggccaaaatgatgatttttagactaatgggaccaaaacgaacactgagaattagttgagggatcatttgattaatttag 635  Q
    |||||||  |||||||||||||||| ||||| ||  |||||||| ||| ||||  |||||  ||| ||| ||||||||||||||||    
T  35070688 gttgaggaaccaaaatgatgattttaagacttatatgaccaaaatgaaaactggtaattaactgaaggaccatttgattaatttag 35070773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 58; Significance: 5e-24; HSPs: 4)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 534 - 635
Target Start/End: Original strand, 23233711 - 23233812
Alignment:
Q  534 gaataacggagcaaacgttgaggggccaaaatgatgatttttagactaatgggaccaaaacgaacactgagaattagttgagggatcatttgattaattt 633  Q
    ||||||||||||||| |||||||| |||||||||||||||| ||||| |||||||||||| ||| | |   |||||||||||||| ||||||||||||||    
T  23233711 gaataacggagcaaaagttgagggaccaaaatgatgattttaagacttatgggaccaaaatgaaaatttgtaattagttgagggaccatttgattaattt 23233810  T
Q  634 ag 635  Q
    ||    
T  23233811 ag 23233812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 550 - 635
Target Start/End: Complemental strand, 23231625 - 23231540
Alignment:
Q  550 gttgaggggccaaaatgatgatttttagactaatgggaccaaaacgaacactgagaattagttgagggatcatttgattaatttag 635  Q
    |||||||| |||||||||||||||| ||||| ||||||||||||  || |||   |||||||||||||| ||||||||||||||||    
T  23231625 gttgagggaccaaaatgatgattttaagacttatgggaccaaaataaaaactcgtaattagttgagggaccatttgattaatttag 23231540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 348 - 408
Target Start/End: Original strand, 42368135 - 42368195
Alignment:
Q  348 ttgggtttatatgaacataatgatgaagttgatgaagatcaagaagaggaagattgaagga 408  Q
    |||||||||||||||||||||| | ||| ||||||||||||||| || ||| |||||||||    
T  42368135 ttgggtttatatgaacataatgtttaagatgatgaagatcaagaggaagaatattgaagga 42368195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 431 - 511
Target Start/End: Original strand, 2717693 - 2717773
Alignment:
Q  431 aggtgatgatggctcactattagaaacaatagacatgcaatcaaatggttaaaatcgcatcatgaatattaaaaattaaaa 511  Q
    ||||| |||||| |||| ||| || | ||| ||| |||||||||||||||||||||  ||||  ||||||||| |||||||    
T  2717693 aggtgttgatggttcaccatttgatataatggacgtgcaatcaaatggttaaaatcagatcagaaatattaaacattaaaa 2717773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 57; Significance: 2e-23; HSPs: 5)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 423 - 623
Target Start/End: Original strand, 18242214 - 18242414
Alignment:
Q  423 aaaaagttaggtgatgatggctcactattagaaacaatagacatgcaatcaaatggttaaaatcgcatcatgaatattaaaaattaaaagactaacagtg 522  Q
    ||||| |||||||||||||| ||||||| | | ||||| ||||||||||||||||||||||||   || |  ||| | | | ||||||| |||||| | |    
T  18242214 aaaaaattaggtgatgatggttcactataaaatacaatggacatgcaatcaaatggttaaaattaaattaaaaatttaagacattaaaaaactaacggag 18242313  T
Q  523 aggaccaaatcgaataacggagcaaacgttgaggggccaaaatgatgatttttagactaatgggaccaaaacgaacactgagaattagttgagggatcat 622  Q
     |||| |||| |||||| |||||||| |||||||| ||||| |||||||||| ||||| ||||||||| ||  || | | | |||||||||||||| |||    
T  18242314 gggacgaaattgaataatggagcaaaagttgagggaccaaattgatgattttaagacttatgggaccagaataaaaattaaaaattagttgagggaccat 18242413  T
Q  623 t 623  Q
    |    
T  18242414 t 18242414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 537 - 616
Target Start/End: Complemental strand, 18240498 - 18240418
Alignment:
Q  537 taacggagcaaacgttgaggggccaaaatgatgattttt-agactaatgggaccaaaacgaacactgagaattagttgagg 616  Q
    |||| ||||||| |||||||| ||||| ||||||||||| ||||  |||||| ||||| ||| ||||| ||||||||||||    
T  18240498 taacagagcaaaagttgagggaccaaattgatgatttttaagacatatgggatcaaaatgaaaactgaaaattagttgagg 18240418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 456 - 531
Target Start/End: Complemental strand, 18773830 - 18773755
Alignment:
Q  456 acaatagacatgcaatcaaatggttaaaatcgcatcatgaatattaaaaattaaaagactaacagtgaggaccaaa 531  Q
    ||||||||||||||||| |||||||||||||  ||||  || || | | ||||||| |||||||| ||||||||||    
T  18773830 acaatagacatgcaatcgaatggttaaaatcatatcaaaaacatcagacattaaaaaactaacagagaggaccaaa 18773755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 445 - 527
Target Start/End: Complemental strand, 29675664 - 29675582
Alignment:
Q  445 cactattagaaacaatagacatgcaatcaaatggttaaaatcgcatcatgaatattaaaaattaaaagactaacagtgaggac 527  Q
    |||||||||| ||||| ||| ||||||| | ||||||||||| ||||||  |||||| | ||||||| |||||| || |||||    
T  29675664 cactattagatacaatggacctgcaatccagtggttaaaatcacatcatacatattatacattaaaaaactaacggtcaggac 29675582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 458 - 486
Target Start/End: Original strand, 11968406 - 11968434
Alignment:
Q  458 aatagacatgcaatcaaatggttaaaatc 486  Q
    |||||||||||||||||||||||||||||    
T  11968406 aatagacatgcaatcaaatggttaaaatc 11968434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 57; Significance: 2e-23; HSPs: 19)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 423 - 635
Target Start/End: Original strand, 10301722 - 10301934
Alignment:
Q  423 aaaaagttaggtgatgatggctcactattagaaacaatagacatgcaatcaaatggttaaaatcgcatcatgaatattaaaaattaaaagactaacagtg 522  Q
    ||||| ||| ||| |||||| ||||| ||| | ||||| ||||| |||||||||||||||||||  ||||  ||  ||| | ||||||| |||||||| |    
T  10301722 aaaaaattatgtgctgatggttcactgttaaatacaatggacattcaatcaaatggttaaaatcaaatcaaaaaatttagacattaaaaaactaacagag 10301821  T
Q  523 aggaccaaatcgaataacggagcaaacgttgaggggccaaaatgatgatttttagactaatgggaccaaaacgaacactgagaattagttgagggatcat 622  Q
       ||||||| || |||||||||||| ||||| || ||| | |||||||||| ||||| |||||||||||| ||| | ||  |||||||||||||| |||    
T  10301822 gacaccaaattgactaacggagcaaaagttgaaggaccatattgatgattttaagacttatgggaccaaaatgaaaaatggaaattagttgagggaccat 10301921  T
Q  623 ttgattaatttag 635  Q
    |  ||||||||||    
T  10301922 tgaattaatttag 10301934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 526 - 634
Target Start/End: Complemental strand, 48083336 - 48083228
Alignment:
Q  526 accaaatcgaataacggagcaaacgttgaggggccaaaatgatgatttttagactaatgggaccaaaacgaacactgagaattagttgagggatcatttg 625  Q
    ||||||| ||||||||||||||| ||| |||| |||||||||||||||| | ||| | |||| ||||| ||| |||||||||||||| ||||| ||||||    
T  48083336 accaaattgaataacggagcaaaggttaagggaccaaaatgatgattttaaaacttaagggatcaaaatgaaaactgagaattagttaagggaccatttg 48083237  T
Q  626 attaattta 634  Q
    | |||||||    
T  48083236 aataattta 48083228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 551 - 635
Target Start/End: Complemental strand, 7270407 - 7270323
Alignment:
Q  551 ttgaggggccaaaatgatgatttttagactaatgggaccaaaacgaacactgagaattagttgagggatcatttgattaatttag 635  Q
    ||||||| |||||||| ||||||| ||||| ||||||| |||| ||| ||||  |||||||||||||||||||||||||||||||    
T  7270407 ttgagggaccaaaatgttgattttaagacttatgggacaaaaatgaaaactggaaattagttgagggatcatttgattaatttag 7270323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 560 - 634
Target Start/End: Complemental strand, 54108614 - 54108540
Alignment:
Q  560 caaaatgatgatttttagactaatgggaccaaaacgaacactgagaattagttgagggatcatttgattaattta 634  Q
    ||||||||| ||||| ||||| |||||||||||||||| |||||||||||||||||||| |||| | ||||||||    
T  54108614 caaaatgataattttaagacttatgggaccaaaacgaaaactgagaattagttgagggaccattgggttaattta 54108540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 534 - 631
Target Start/End: Original strand, 54110298 - 54110395
Alignment:
Q  534 gaataacggagcaaacgttgaggggccaaaatgatgatttttagactaatgggaccaaaacgaacactgagaattagttgagggatcatttgattaat 631  Q
    ||||||| ||||||| | |||||| | |||||||||||||| ||||| ||| ||||||| |||| | ||||||||| |||||||| ||||||||||||    
T  54110298 gaataacagagcaaaagatgagggactaaaatgatgattttaagacttatgagaccaaagcgaaaattgagaattaattgagggaccatttgattaat 54110395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 559 - 635
Target Start/End: Original strand, 48084993 - 48085069
Alignment:
Q  559 ccaaaatgatgatttttagactaatgggaccaaaacgaacactgagaattagttgagggatcatttgattaatttag 635  Q
    |||||||||||||||| ||||| | | ||||||||  || |||||||||||||||||||| ||||||||||||||||    
T  48084993 ccaaaatgatgattttaagacttaagagaccaaaataaaaactgagaattagttgagggaccatttgattaatttag 48085069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 565 - 635
Target Start/End: Complemental strand, 44601719 - 44601649
Alignment:
Q  565 tgatgatttttagactaatgggaccaaaacgaacactgagaattagttgagggatcatttgattaatttag 635  Q
    |||||||||| ||||| ||| ||| |||| ||| |||||||||||||||||||| ||||||||||||||||    
T  44601719 tgatgattttaagacttatgagactaaaatgaaaactgagaattagttgagggaccatttgattaatttag 44601649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 534 - 635
Target Start/End: Original strand, 53194626 - 53194727
Alignment:
Q  534 gaataacggagcaaacgttgaggggccaaaatgatgatttttagactaatgggaccaaaacgaacactgagaattagttgagggatcatttgattaattt 633  Q
    |||||||  |||||| ||||| || |||||||||||||||| | ||| |||| ||||||| ||| ||||  |||||||||||||| |||| |||||||||    
T  53194626 gaataacaaagcaaaagttgaaggaccaaaatgatgattttaaaacttatggaaccaaaatgaaaactggtaattagttgagggaccattggattaattt 53194725  T
Q  634 ag 635  Q
    ||    
T  53194726 ag 53194727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 423 - 486
Target Start/End: Original strand, 47766858 - 47766921
Alignment:
Q  423 aaaaagttaggtgatgatggctcactattagaaacaatagacatgcaatcaaatggttaaaatc 486  Q
    ||||| ||||||| ||| || ||||||||||| ||||| |||||||||||||||||||||||||    
T  47766858 aaaaaattaggtgctgacggttcactattagatacaatggacatgcaatcaaatggttaaaatc 47766921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 534 - 635
Target Start/End: Complemental strand, 10301041 - 10300939
Alignment:
Q  534 gaataacggagcaaacgttgaggggccaaaatgatgatttttagactaatgggaccaaaacgaacactg-agaattagttgagggatcatttgattaatt 632  Q
    |||||||||||||||||||||||| ||| | |||||||||| ||| | |||| ||||||| ||| |||| | |||||||| ||||| ||||  |||||||    
T  10301041 gaataacggagcaaacgttgagggaccagattgatgattttaagatttatggaaccaaaatgaaaactgaaaaattagttaagggaccattgaattaatt 10300942  T
Q  633 tag 635  Q
    |||    
T  10300941 tag 10300939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 534 - 635
Target Start/End: Original strand, 44603057 - 44603158
Alignment:
Q  534 gaataacggagcaaacgttgaggggccaaaatgatgatttttagactaatgggaccaaaacgaacactgagaattagttgagggatcatttgattaattt 633  Q
    ||||||||||||||| |||||||| |   | |||| ||||| ||| | ||||||||||||  || ||||| |||||||||||||| ||||| ||||||||    
T  44603057 gaataacggagcaaaagttgagggactcgattgattattttaagatttatgggaccaaaataaaaactgaaaattagttgagggaccatttaattaattt 44603156  T
Q  634 ag 635  Q
    ||    
T  44603157 ag 44603158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 423 - 492
Target Start/End: Complemental strand, 48253142 - 48253073
Alignment:
Q  423 aaaaagttaggtgatgatggctcactattagaaacaatagacatgcaatcaaatggttaaaatcgcatca 492  Q
    ||||| ||||||| |||  | ||||||||||| ||||| ||||||||||||||||||||||||| |||||    
T  48253142 aaaaaattaggtgttgacagttcactattagatacaatggacatgcaatcaaatggttaaaatcacatca 48253073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 534 - 593
Target Start/End: Complemental strand, 10338839 - 10338780
Alignment:
Q  534 gaataacggagcaaacgttgaggggccaaaatgatgatttttagactaatgggaccaaaa 593  Q
    |||||| ||||||||||||||||| |||||||||||||||| | | | ||||||||||||    
T  10338839 gaataagggagcaaacgttgagggaccaaaatgatgattttaaaatttatgggaccaaaa 10338780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 560 - 634
Target Start/End: Complemental strand, 46368883 - 46368809
Alignment:
Q  560 caaaatgatgatttttagactaatgggaccaaaacgaacactgagaattagttgagggatcatttgattaattta 634  Q
    ||||||||||||||| || || ||| |||||||| ||| ||| | |||||| ||||||| |||||||||||||||    
T  46368883 caaaatgatgattttaagccttatgagaccaaaatgaatacttataattagctgagggaccatttgattaattta 46368809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 445 - 527
Target Start/End: Original strand, 143104 - 143186
Alignment:
Q  445 cactattagaaacaatagacatgcaatcaaatggttaaaatcgcatcatgaatattaaaaattaaaagactaacagtgaggac 527  Q
    |||||||||| |||||  || ||||||||| ||||||||||| ||||||  |||||| | ||||||| | |||| ||||||||    
T  143104 cactattagatacaatgaacctgcaatcaagtggttaaaatcacatcatacatattatacattaaaaaattaacggtgaggac 143186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 423 - 485
Target Start/End: Original strand, 53809400 - 53809462
Alignment:
Q  423 aaaaagttaggtgatgatggctcactattagaaacaatagacatgcaatcaaatggttaaaat 485  Q
    ||||| ||||||| ||| |  ||||| ||| | ||||||||||||||||||||||||||||||    
T  53809400 aaaaaattaggtgctgacgattcactgttaaatacaatagacatgcaatcaaatggttaaaat 53809462  T

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Target: chr3; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 349 - 390
Target Start/End: Complemental strand, 17029950 - 17029909
Alignment:
Q  349 tgggtttatatgaacataatgatgaagttgatgaagatcaag 390  Q
    ||||||||||||||||| ||| ||||| ||||||||||||||    
T  17029950 tgggtttatatgaacatgatggtgaagatgatgaagatcaag 17029909  T

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Target: chr3; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 456 - 517
Target Start/End: Original strand, 45422105 - 45422166
Alignment:
Q  456 acaatagacatgcaatcaaatggttaaaatcgcatcatgaatattaaaaattaaaagactaa 517  Q
    ||||||||| ||||||||||||||||| |||  |||| |||||||| | ||||||| |||||    
T  45422105 acaatagacctgcaatcaaatggttaatatcatatcaagaatattagacattaaaaaactaa 45422166  T

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Target: chr3; HSP #19
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 423 - 511
Target Start/End: Complemental strand, 21515472 - 21515384
Alignment:
Q  423 aaaaagttaggtgatgatggctcactattagaaacaatagacatgcaatcaaatggttaaaatcgcatcatgaatattaaaaattaaaa 511  Q
    ||||| ||| ||| ||||||  |||||||||| ||||| ||| ||||||||| ||||||||||| ||| ||  |||||| | |||||||    
T  21515472 aaaaaattatgtggtgatggtgcactattagatacaatggacctgcaatcaagtggttaaaatcacattatacatattatacattaaaa 21515384  T

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Target: chr5 (Bit Score: 39; Significance: 0.000000000001; HSPs: 3)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 423 - 593
Target Start/End: Original strand, 10736842 - 10737012
Alignment:
Q  423 aaaaagttaggtgatgatggctcactattagaaacaatagacatgcaatcaaatggttaaaatcgcatcatgaatattaaaaattaaaagactaacagtg 522  Q
    ||||| ||| ||| ||| || ||||||||||| ||||| ||||| |||||||||||||||||||  ||||  ||| ||| | |||||||   |||| | |    
T  10736842 aaaaaattaagtgttgacggttcactattagatacaatggacattcaatcaaatggttaaaatcaaatcaaaaattttagacattaaaaagttaacggag 10736941  T
Q  523 aggaccaaatcgaataacggagcaaacgttgaggggccaaaatgatgatttttagactaatgggaccaaaa 593  Q
     ||||||||| || ||||||||||||    ||||| |||||||| |||||||  || | ||||||||||||    
T  10736942 gggaccaaattgattaacggagcaaaacaagagggaccaaaatgttgattttacgagttatgggaccaaaa 10737012  T

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Target: chr5; HSP #2
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 534 - 635
Target Start/End: Original strand, 9220475 - 9220576
Alignment:
Q  534 gaataacggagcaaacgttgaggggccaaaatgatgatttttagactaatgggaccaaaacgaacactgagaattagttgagggatcatttgattaattt 633  Q
    ||||||| ||||||| |||||||| |||||||  ||||||  ||||| |||||| ||||| ||| ||||  |||||||||||||| ||||  ||||||||    
T  9220475 gaataacagagcaaaagttgagggaccaaaattctgatttcaagacttatgggaacaaaatgaaaactggaaattagttgagggaccattgaattaattt 9220574  T
Q  634 ag 635  Q
    ||    
T  9220575 ag 9220576  T

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Target: chr5; HSP #3
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 424 - 529
Target Start/End: Original strand, 8188108 - 8188213
Alignment:
Q  424 aaaagttaggtgatgatggctcactattagaaacaatagacatgcaatcaaatggttaaaatcgcatcatgaatattaaaaattaaaagactaacagtga 523  Q
    |||| ||||||| |||||| |||| |||| | | ||| |||||||||||||||||||||||||  ||||  ||| ||| | ||||||| |||||| | ||    
T  8188108 aaaaattaggtgttgatggttcaccattaaatataatggacatgcaatcaaatggttaaaatcatatcagaaattttagacattaaaaaactaacggaga 8188207  T
Q  524 ggacca 529  Q
    ||||||    
T  8188208 ggacca 8188213  T

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Target: scaffold0084 (Bit Score: 36; Significance: 0.00000000006; HSPs: 1)
Name: scaffold0084
Description:

Target: scaffold0084; HSP #1
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 456 - 531
Target Start/End: Complemental strand, 11882 - 11807
Alignment:
Q  456 acaatagacatgcaatcaaatggttaaaatcgcatcatgaatattaaaaattaaaagactaacagtgaggaccaaa 531  Q
    |||||| |||||||||| ||||||||||||| |||||  ||||||| | ||||||| |||||| | ||||||||||    
T  11882 acaataaacatgcaatcgaatggttaaaatcacatcaaaaatattagacattaaaaaactaacggagaggaccaaa 11807  T

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