View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF3300_high_3 (Length: 479)

Name: NF3300_high_3
Description: NF3300
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF3300_high_3
NF3300_high_3
[»] chr1 (90 HSPs)
chr1 (1-477)||(37631409-37631895)
chr1 (64-254)||(14576567-14576756)
chr1 (67-257)||(473128-473317)
chr1 (139-276)||(7862023-7862160)
chr1 (69-241)||(3233933-3234105)
chr1 (66-241)||(2295079-2295251)
chr1 (131-234)||(49938734-49938837)
chr1 (134-256)||(24915034-24915156)
chr1 (154-279)||(47432038-47432162)
chr1 (131-241)||(17603364-17603474)
chr1 (66-194)||(33186332-33186461)
chr1 (136-217)||(51929524-51929605)
chr1 (66-194)||(15477592-15477708)
chr1 (158-276)||(27820344-27820461)
chr1 (57-217)||(5741610-5741770)
chr1 (68-257)||(13809962-13810151)
chr1 (80-193)||(29904779-29904892)
chr1 (72-239)||(2777874-2778040)
chr1 (143-257)||(51688669-51688782)
chr1 (57-217)||(5720929-5721089)
chr1 (131-271)||(41184630-41184770)
chr1 (143-235)||(42174841-42174933)
chr1 (60-203)||(43230681-43230822)
chr1 (140-275)||(836328-836463)
chr1 (131-214)||(30286499-30286582)
chr1 (131-206)||(37473418-37473493)
chr1 (131-214)||(38503445-38503528)
chr1 (153-239)||(1510312-1510398)
chr1 (126-279)||(27976537-27976699)
chr1 (66-237)||(36872716-36872883)
chr1 (131-279)||(41505629-41505774)
chr1 (134-206)||(7941621-7941693)
chr1 (163-254)||(1565547-1565638)
chr1 (131-241)||(6556951-6557062)
chr1 (131-241)||(27970274-27970385)
chr1 (131-190)||(37517146-37517205)
chr1 (131-194)||(40977383-40977446)
chr1 (158-257)||(51695502-51695600)
chr1 (139-217)||(6292497-6292574)
chr1 (131-217)||(7136979-7137064)
chr1 (163-293)||(30581730-30581859)
chr1 (163-241)||(41195205-41195283)
chr1 (169-300)||(34290160-34290288)
chr1 (164-257)||(49888731-49888824)
chr1 (189-256)||(3069972-3070040)
chr1 (134-214)||(5709634-5709713)
chr1 (158-299)||(15784257-15784392)
chr1 (199-279)||(30581996-30582076)
chr1 (131-238)||(1509734-1509841)
chr1 (127-206)||(37593661-37593739)
chr1 (158-217)||(45975694-45975753)
chr1 (163-217)||(35179143-35179197)
chr1 (70-173)||(50644174-50644279)
chr1 (131-195)||(3887612-3887676)
chr1 (179-239)||(7069283-7069343)
chr1 (169-241)||(7472291-7472363)
chr1 (169-254)||(15687364-15687451)
chr1 (158-258)||(17577775-17577875)
chr1 (168-276)||(34795442-34795550)
chr1 (167-279)||(37769676-37769788)
chr1 (163-290)||(2294842-2294969)
chr1 (182-217)||(5894186-5894221)
chr1 (131-206)||(10199389-10199463)
chr1 (169-204)||(10809362-10809397)
chr1 (66-117)||(14385708-14385759)
chr1 (134-274)||(36872215-36872352)
chr1 (133-212)||(38170673-38170751)
chr1 (169-300)||(38882930-38883059)
chr1 (163-214)||(39603843-39603894)
chr1 (172-214)||(3224430-3224472)
chr1 (150-240)||(7107517-7107606)
chr1 (158-196)||(7218081-7218119)
chr1 (158-212)||(10280658-10280712)
chr1 (163-241)||(11893178-11893256)
chr1 (153-275)||(33546455-33546577)
chr1 (66-148)||(38247400-38247482)
chr1 (164-206)||(51190863-51190905)
chr1 (66-99)||(2295313-2295346)
chr1 (171-292)||(4576735-4576855)
chr1 (169-206)||(12564517-12564554)
chr1 (169-222)||(27140477-27140530)
chr1 (66-206)||(39976125-39976268)
chr1 (134-194)||(341474-341534)
chr1 (169-205)||(1232923-1232959)
chr1 (169-217)||(5887012-5887060)
chr1 (173-217)||(9572093-9572137)
chr1 (169-197)||(10799486-10799514)
chr1 (69-109)||(11695974-11696014)
chr1 (69-101)||(34952322-34952354)
chr1 (169-245)||(43332460-43332536)
[»] chr5 (57 HSPs)
chr5 (68-257)||(16937800-16937989)
chr5 (70-219)||(12857624-12857773)
chr5 (70-271)||(12857257-12857457)
chr5 (66-276)||(10639898-10640108)
chr5 (134-300)||(39105385-39105551)
chr5 (131-277)||(16457959-16458104)
chr5 (129-266)||(32009647-32009785)
chr5 (133-266)||(40426720-40426853)
chr5 (66-206)||(7705913-7706053)
chr5 (83-277)||(29925785-29925978)
chr5 (71-212)||(9107099-9107240)
chr5 (69-298)||(9202666-9202895)
chr5 (70-214)||(43300885-43301029)
chr5 (138-279)||(35445997-35446138)
chr5 (134-214)||(37954693-37954773)
chr5 (131-194)||(3735138-3735201)
chr5 (69-279)||(3932594-3932813)
chr5 (65-207)||(42100325-42100467)
chr5 (169-298)||(12425494-12425623)
chr5 (158-293)||(4014431-4014566)
chr5 (66-250)||(40438869-40439052)
chr5 (169-257)||(42582876-42582964)
chr5 (66-241)||(25461563-25461737)
chr5 (126-206)||(42500217-42500296)
chr5 (131-290)||(706394-706553)
chr5 (69-300)||(1464938-1465168)
chr5 (143-238)||(25461074-25461169)
chr5 (133-206)||(7984984-7985057)
chr5 (131-288)||(32022004-32022161)
chr5 (66-257)||(34102228-34102420)
chr5 (137-225)||(39477879-39477967)
chr5 (126-196)||(36797070-36797141)
chr5 (174-257)||(41981888-41981971)
chr5 (169-251)||(41957469-41957551)
chr5 (170-215)||(7319412-7319457)
chr5 (169-242)||(35445861-35445934)
chr5 (169-278)||(39594751-39594859)
chr5 (77-168)||(3520630-3520721)
chr5 (66-180)||(6521118-6521233)
chr5 (172-215)||(7319029-7319072)
chr5 (156-211)||(13697764-13697819)
chr5 (163-217)||(29845446-29845501)
chr5 (70-108)||(9174929-9174967)
chr5 (154-254)||(24030404-24030505)
chr5 (134-195)||(32859703-32859763)
chr5 (134-195)||(32861875-32861935)
chr5 (144-197)||(34160755-34160808)
chr5 (66-99)||(41535019-41535052)
chr5 (224-277)||(42500298-42500351)
chr5 (131-228)||(42646660-42646757)
chr5 (69-148)||(1773024-1773101)
chr5 (129-217)||(3977312-3977399)
chr5 (161-217)||(6593303-6593359)
chr5 (131-191)||(8334601-8334661)
chr5 (169-257)||(10272449-10272537)
chr5 (158-206)||(12521543-12521591)
chr5 (150-194)||(34669729-34669773)
[»] chr3 (75 HSPs)
chr3 (133-256)||(30443858-30443981)
chr3 (70-279)||(20880419-20880627)
chr3 (69-241)||(39980709-39980881)
chr3 (72-251)||(21367637-21367816)
chr3 (131-275)||(36631031-36631175)
chr3 (71-214)||(24085258-24085401)
chr3 (74-188)||(31365111-31365225)
chr3 (150-257)||(36189530-36189636)
chr3 (80-241)||(46778120-46778280)
chr3 (71-279)||(583988-584196)
chr3 (150-278)||(35959455-35959583)
chr3 (127-214)||(901931-902018)
chr3 (135-300)||(402526-402690)
chr3 (166-279)||(3845577-3845690)
chr3 (131-257)||(20170487-20170613)
chr3 (131-279)||(24684802-24684951)
chr3 (131-278)||(37689176-37689319)
chr3 (133-197)||(43062715-43062779)
chr3 (131-279)||(53789441-53789589)
chr3 (74-197)||(31365232-31365355)
chr3 (163-241)||(47132311-47132389)
chr3 (67-233)||(13715488-13715656)
chr3 (131-251)||(20257505-20257626)
chr3 (166-214)||(33972749-33972797)
chr3 (139-206)||(466208-466275)
chr3 (72-234)||(18405752-18405914)
chr3 (134-189)||(25453842-25453897)
chr3 (143-197)||(46478713-46478767)
chr3 (137-206)||(28795839-28795908)
chr3 (138-206)||(4401059-4401127)
chr3 (126-206)||(22203445-22203525)
chr3 (66-202)||(36139897-36140030)
chr3 (134-182)||(49556897-49556945)
chr3 (126-257)||(1816547-1816677)
chr3 (163-206)||(26990503-26990546)
chr3 (158-237)||(28622006-28622085)
chr3 (184-279)||(30956659-30956754)
chr3 (184-279)||(30972471-30972566)
chr3 (158-217)||(32582748-32582807)
chr3 (131-254)||(34610786-34610909)
chr3 (163-214)||(35696245-35696296)
chr3 (70-189)||(36101600-36101716)
chr3 (169-284)||(39602228-39602342)
chr3 (131-206)||(45541586-45541660)
chr3 (131-202)||(46031009-46031080)
chr3 (67-117)||(20170630-20170680)
chr3 (174-276)||(21335620-21335722)
chr3 (163-217)||(44747420-44747474)
chr3 (66-108)||(51929854-51929896)
chr3 (127-192)||(944591-944656)
chr3 (68-193)||(9832672-9832797)
chr3 (131-300)||(31403279-31403448)
chr3 (164-217)||(50600191-50600244)
chr3 (135-187)||(26911619-26911671)
chr3 (145-197)||(35574862-35574913)
chr3 (169-217)||(41633364-41633412)
chr3 (67-197)||(22882-23013)
chr3 (172-215)||(2719474-2719517)
chr3 (131-190)||(5391910-5391968)
chr3 (127-206)||(23808041-23808119)
chr3 (167-214)||(33231734-33231781)
chr3 (158-221)||(36783341-36783404)
chr3 (169-251)||(1217818-1217900)
chr3 (174-256)||(14145877-14145959)
chr3 (158-240)||(40665410-40665492)
chr3 (66-108)||(44014713-44014755)
chr3 (172-202)||(50946307-50946337)
chr3 (69-186)||(26878235-26878352)
chr3 (169-206)||(33883768-33883805)
chr3 (133-206)||(34254791-34254863)
chr3 (231-299)||(34638044-34638113)
chr3 (66-98)||(1820047-1820079)
chr3 (156-212)||(7301348-7301404)
chr3 (167-279)||(31106119-31106231)
chr3 (67-99)||(47132438-47132470)
[»] chr7 (66 HSPs)
chr7 (66-257)||(48470008-48470199)
chr7 (131-279)||(30570911-30571059)
chr7 (74-277)||(420304-420507)
chr7 (131-234)||(28614420-28614523)
chr7 (83-253)||(33601342-33601511)
chr7 (70-214)||(11619077-11619221)
chr7 (162-241)||(46280283-46280362)
chr7 (68-241)||(19302480-19302649)
chr7 (131-239)||(34744010-34744118)
chr7 (70-257)||(20526410-20526597)
chr7 (128-241)||(33602004-33602116)
chr7 (168-298)||(37064481-37064613)
chr7 (66-250)||(17944258-17944442)
chr7 (131-214)||(21568475-21568558)
chr7 (137-214)||(39629943-39630020)
chr7 (134-214)||(19022568-19022648)
chr7 (101-216)||(44989627-44989743)
chr7 (64-182)||(5947280-5947398)
chr7 (139-206)||(38499901-38499968)
chr7 (133-191)||(27566676-27566734)
chr7 (131-241)||(27863705-27863815)
chr7 (150-276)||(38138478-38138604)
chr7 (66-234)||(45593514-45593684)
chr7 (138-236)||(49019853-49019951)
chr7 (66-255)||(40377767-40377956)
chr7 (133-257)||(39279926-39280050)
chr7 (151-279)||(40252107-40252235)
chr7 (133-256)||(12110325-12110447)
chr7 (131-206)||(19214386-19214461)
chr7 (169-240)||(44821940-44822011)
chr7 (131-214)||(45790406-45790488)
chr7 (164-266)||(20269531-20269633)
chr7 (175-241)||(43694594-43694660)
chr7 (140-266)||(45264050-45264176)
chr7 (131-236)||(43648225-43648330)
chr7 (66-206)||(25596048-25596187)
chr7 (62-202)||(33128772-33128910)
chr7 (132-172)||(34464202-34464242)
chr7 (150-193)||(3928009-3928052)
chr7 (131-206)||(5947199-5947274)
chr7 (74-257)||(33678744-33678927)
chr7 (150-241)||(45338429-45338519)
chr7 (152-254)||(15309567-15309668)
chr7 (66-112)||(40252038-40252084)
chr7 (66-206)||(36517594-36517732)
chr7 (140-192)||(20428503-20428555)
chr7 (73-148)||(32410612-32410688)
chr7 (66-240)||(4970707-4970882)
chr7 (163-222)||(6601366-6601425)
chr7 (83-214)||(21196276-21196406)
chr7 (131-194)||(39967947-39968010)
chr7 (168-257)||(48507685-48507776)
chr7 (169-215)||(7244686-7244732)
chr7 (131-217)||(20526909-20526995)
chr7 (163-257)||(22283756-22283850)
chr7 (70-112)||(34083527-34083569)
chr7 (132-206)||(43250681-43250754)
chr7 (169-206)||(28128413-28128450)
chr7 (169-298)||(33673001-33673129)
chr7 (164-241)||(39907783-39907860)
chr7 (158-218)||(529378-529438)
chr7 (131-194)||(3308231-3308295)
chr7 (167-215)||(9050641-9050689)
chr7 (178-266)||(11700293-11700381)
chr7 (150-194)||(28341056-28341099)
chr7 (169-217)||(47559619-47559667)
[»] chr4 (79 HSPs)
chr4 (67-214)||(54426050-54426197)
chr4 (66-253)||(17822780-17822967)
chr4 (64-212)||(26778-26925)
chr4 (131-279)||(50681069-50681217)
chr4 (66-206)||(55302264-55302404)
chr4 (66-237)||(21731571-21731742)
chr4 (70-277)||(41336705-41336911)
chr4 (131-257)||(20108973-20109099)
chr4 (72-278)||(22030147-22030352)
chr4 (69-205)||(13126494-13126630)
chr4 (70-214)||(39603090-39603233)
chr4 (134-240)||(7839344-7839450)
chr4 (131-254)||(55064800-55064925)
chr4 (133-206)||(25904205-25904278)
chr4 (137-257)||(55414406-55414526)
chr4 (131-231)||(50662718-50662818)
chr4 (139-206)||(2244066-2244133)
chr4 (68-214)||(40830947-40831092)
chr4 (66-241)||(53294029-53294204)
chr4 (131-205)||(29657400-29657474)
chr4 (152-217)||(437245-437310)
chr4 (69-238)||(35571549-35571718)
chr4 (177-277)||(9760384-9760484)
chr4 (169-257)||(17884032-17884120)
chr4 (137-257)||(54069403-54069523)
chr4 (70-205)||(24169279-24169414)
chr4 (169-206)||(825508-825545)
chr4 (163-236)||(16199993-16200066)
chr4 (128-197)||(44138583-44138652)
chr4 (131-212)||(46588053-46588134)
chr4 (169-250)||(54392837-54392918)
chr4 (138-241)||(1407936-1408040)
chr4 (126-214)||(30668342-30668429)
chr4 (150-273)||(46592208-46592332)
chr4 (134-293)||(1706550-1706709)
chr4 (169-276)||(3155548-3155655)
chr4 (66-117)||(18815127-18815178)
chr4 (69-234)||(49940085-49940252)
chr4 (169-300)||(51630032-51630163)
chr4 (158-257)||(52746847-52746946)
chr4 (131-206)||(56249539-56249613)
chr4 (67-213)||(29388622-29388768)
chr4 (151-277)||(33586955-33587080)
chr4 (175-257)||(42685388-42685470)
chr4 (136-277)||(44797830-44797972)
chr4 (168-241)||(20031729-20031802)
chr4 (134-195)||(21523584-21523644)
chr4 (142-239)||(41512633-41512730)
chr4 (65-117)||(39691063-39691115)
chr4 (150-214)||(44862983-44863047)
chr4 (169-217)||(50004162-50004210)
chr4 (170-206)||(52315216-52315252)
chr4 (133-240)||(2996554-2996660)
chr4 (180-291)||(7601689-7601800)
chr4 (131-194)||(20109612-20109675)
chr4 (128-205)||(38515849-38515923)
chr4 (169-250)||(25332745-25332827)
chr4 (69-254)||(27043748-27043933)
chr4 (168-206)||(30377432-30377470)
chr4 (167-257)||(39691159-39691249)
chr4 (163-217)||(52259635-52259689)
chr4 (169-206)||(2592327-2592364)
chr4 (131-195)||(2703052-2703117)
chr4 (66-107)||(23319965-23320006)
chr4 (170-223)||(25548548-25548601)
chr4 (66-183)||(25571298-25571414)
chr4 (131-206)||(42641620-42641696)
chr4 (70-154)||(437083-437167)
chr4 (72-108)||(3637299-3637335)
chr4 (169-205)||(4500862-4500898)
chr4 (135-187)||(8263448-8263500)
chr4 (135-187)||(8276866-8276918)
chr4 (69-117)||(8705045-8705093)
chr4 (171-275)||(13126629-13126731)
chr4 (169-221)||(32421277-32421329)
chr4 (131-187)||(38336876-38336932)
chr4 (131-187)||(43886112-43886167)
chr4 (169-217)||(47800627-47800675)
chr4 (177-257)||(56480312-56480392)
[»] chr8 (59 HSPs)
chr8 (76-250)||(18133627-18133801)
chr8 (66-279)||(35534528-35534738)
chr8 (69-278)||(26771208-26771416)
chr8 (66-237)||(30251369-30251540)
chr8 (67-202)||(43045641-43045776)
chr8 (73-214)||(12976220-12976360)
chr8 (60-202)||(35643897-35644039)
chr8 (134-253)||(10758240-10758358)
chr8 (137-247)||(27028805-27028915)
chr8 (69-232)||(36963272-36963434)
chr8 (62-237)||(38648335-38648510)
chr8 (131-264)||(29205765-29205897)
chr8 (131-298)||(10114413-10114579)
chr8 (159-266)||(38602289-38602395)
chr8 (131-277)||(16825518-16825663)
chr8 (64-206)||(31716140-31716282)
chr8 (131-202)||(10120775-10120846)
chr8 (169-300)||(37353267-37353397)
chr8 (68-241)||(15180521-15180692)
chr8 (79-197)||(1058005-1058122)
chr8 (135-240)||(6881908-6882013)
chr8 (74-214)||(28763375-28763515)
chr8 (131-240)||(29168037-29168146)
chr8 (174-279)||(42043368-42043473)
chr8 (169-253)||(36338280-36338366)
chr8 (131-214)||(37945603-37945686)
chr8 (163-214)||(43504758-43504809)
chr8 (131-217)||(1930039-1930125)
chr8 (131-237)||(12010870-12010976)
chr8 (163-217)||(38874650-38874704)
chr8 (163-201)||(42893502-42893540)
chr8 (70-211)||(44792668-44792807)
chr8 (152-193)||(11407349-11407390)
chr8 (158-215)||(20672756-20672813)
chr8 (66-206)||(43717849-43717992)
chr8 (154-234)||(11861791-11861871)
chr8 (171-206)||(27754419-27754454)
chr8 (177-228)||(30657798-30657849)
chr8 (131-206)||(35749550-35749625)
chr8 (131-189)||(10383917-10383974)
chr8 (131-189)||(13459677-13459734)
chr8 (66-112)||(13958001-13958047)
chr8 (66-108)||(16162873-16162915)
chr8 (158-204)||(21653098-21653144)
chr8 (251-293)||(30657861-30657903)
chr8 (131-201)||(36338182-36338252)
chr8 (67-109)||(38874759-38874801)
chr8 (169-215)||(44236841-44236887)
chr8 (131-188)||(8146362-8146419)
chr8 (169-202)||(9956832-9956865)
chr8 (164-217)||(14247237-14247290)
chr8 (150-279)||(25930553-25930682)
chr8 (180-257)||(29168921-29168998)
chr8 (140-189)||(31751546-31751595)
chr8 (74-214)||(6525824-6525964)
chr8 (74-110)||(11185332-11185368)
chr8 (169-217)||(28769357-28769405)
chr8 (131-187)||(32840966-32841022)
chr8 (131-215)||(33808309-33808393)
[»] chr2 (87 HSPs)
chr2 (157-279)||(12464479-12464601)
chr2 (134-277)||(43279512-43279653)
chr2 (67-279)||(45229454-45229665)
chr2 (66-197)||(15305698-15305829)
chr2 (131-277)||(32592531-32592676)
chr2 (70-278)||(15757577-15757786)
chr2 (66-300)||(10619135-10619364)
chr2 (70-257)||(2416277-2416464)
chr2 (66-203)||(7928213-7928351)
chr2 (126-275)||(23974468-23974614)
chr2 (67-241)||(39659425-39659599)
chr2 (164-279)||(42868479-42868589)
chr2 (134-214)||(26202035-26202115)
chr2 (163-279)||(41241144-41241260)
chr2 (134-257)||(41851499-41851622)
chr2 (104-250)||(18066099-18066245)
chr2 (133-251)||(40279167-40279285)
chr2 (70-279)||(41812011-41812218)
chr2 (66-206)||(4606940-4607080)
chr2 (131-257)||(16451089-16451208)
chr2 (62-214)||(20952362-20952514)
chr2 (139-257)||(12289760-12289879)
chr2 (152-206)||(40835543-40835597)
chr2 (169-302)||(4026736-4026869)
chr2 (133-257)||(11201363-11201488)
chr2 (72-197)||(1633421-1633538)
chr2 (139-279)||(2227108-2227248)
chr2 (73-197)||(31561664-31561788)
chr2 (169-257)||(42457912-42458000)
chr2 (131-250)||(1625871-1625990)
chr2 (131-210)||(28677640-28677718)
chr2 (72-241)||(33319737-33319902)
chr2 (68-217)||(26143559-26143706)
chr2 (175-237)||(27695619-27695681)
chr2 (70-228)||(30331753-30331902)
chr2 (129-203)||(33981140-33981214)
chr2 (134-239)||(5745768-5745873)
chr2 (131-267)||(26626826-26626963)
chr2 (219-300)||(42420362-42420443)
chr2 (150-206)||(12194967-12195023)
chr2 (150-206)||(20926518-20926574)
chr2 (136-266)||(423677-423808)
chr2 (131-206)||(750685-750760)
chr2 (173-276)||(2195906-2196009)
chr2 (174-217)||(6167306-6167349)
chr2 (131-194)||(13325597-13325660)
chr2 (135-206)||(36125376-36125447)
chr2 (150-257)||(39073688-39073795)
chr2 (139-293)||(3611154-3611308)
chr2 (131-221)||(35378513-35378602)
chr2 (131-189)||(43570446-43570503)
chr2 (163-264)||(9395087-9395188)
chr2 (133-206)||(40279282-40279355)
chr2 (133-206)||(40279352-40279425)
chr2 (169-217)||(1893299-1893347)
chr2 (64-299)||(2142575-2142811)
chr2 (133-189)||(8820275-8820330)
chr2 (66-98)||(29936151-29936183)
chr2 (66-206)||(36534783-36534923)
chr2 (66-257)||(41407265-41407457)
chr2 (131-214)||(42420203-42420286)
chr2 (134-241)||(680483-680589)
chr2 (131-206)||(1647251-1647325)
chr2 (166-241)||(1810645-1810719)
chr2 (62-217)||(9174819-9174974)
chr2 (152-239)||(12795774-12795860)
chr2 (163-206)||(16398129-16398172)
chr2 (131-206)||(41293143-41293218)
chr2 (66-117)||(42868396-42868447)
chr2 (139-217)||(29316764-29316841)
chr2 (67-109)||(33503110-33503152)
chr2 (168-206)||(42419821-42419859)
chr2 (163-216)||(6718546-6718598)
chr2 (131-212)||(7035547-7035628)
chr2 (169-206)||(10646307-10646344)
chr2 (169-206)||(15978000-15978037)
chr2 (69-122)||(18179048-18179101)
chr2 (179-276)||(28206212-28206309)
chr2 (169-206)||(35379034-35379071)
chr2 (169-206)||(40279422-40279459)
chr2 (158-195)||(43511111-43511148)
chr2 (66-110)||(2790349-2790393)
chr2 (176-204)||(21616652-21616680)
chr2 (69-109)||(30990357-30990397)
chr2 (170-238)||(33931589-33931657)
chr2 (65-101)||(40759280-40759316)
chr2 (169-217)||(42621393-42621441)
[»] scaffold0221 (1 HSPs)
scaffold0221 (66-206)||(22246-22386)
[»] chr6 (43 HSPs)
chr6 (66-206)||(35070569-35070705)
chr6 (137-240)||(34430447-34430550)
chr6 (66-188)||(848022-848143)
chr6 (133-304)||(9093538-9093709)
chr6 (131-257)||(2735033-2735159)
chr6 (153-239)||(6536597-6536683)
chr6 (131-279)||(31623502-31623640)
chr6 (131-276)||(20368161-20368305)
chr6 (134-206)||(13907600-13907672)
chr6 (131-202)||(9912171-9912242)
chr6 (136-206)||(12628357-12628425)
chr6 (131-217)||(31624094-31624179)
chr6 (167-212)||(160968-161013)
chr6 (137-206)||(9763575-9763644)
chr6 (69-226)||(24982700-24982857)
chr6 (163-212)||(31624953-31625002)
chr6 (203-299)||(4163097-4163193)
chr6 (203-299)||(4224718-4224814)
chr6 (177-241)||(8201213-8201277)
chr6 (163-239)||(35070479-35070555)
chr6 (169-283)||(837234-837348)
chr6 (67-112)||(103539-103584)
chr6 (169-206)||(835267-835304)
chr6 (180-257)||(3785729-3785806)
chr6 (68-193)||(34430743-34430867)
chr6 (176-300)||(33117463-33117586)
chr6 (69-112)||(835179-835222)
chr6 (134-193)||(18076231-18076290)
chr6 (163-218)||(30536513-30536568)
chr6 (131-206)||(31813176-31813251)
chr6 (167-197)||(835040-835070)
chr6 (70-112)||(4163262-4163304)
chr6 (70-112)||(4224883-4224925)
chr6 (171-241)||(6538492-6538562)
chr6 (150-203)||(32014281-32014332)
chr6 (62-91)||(2457071-2457100)
chr6 (171-279)||(6909892-6910001)
chr6 (168-204)||(264380-264416)
chr6 (169-241)||(836559-836631)
chr6 (158-206)||(4420658-4420706)
chr6 (131-191)||(19411529-19411589)
chr6 (66-110)||(32205928-32205972)
chr6 (135-199)||(34910393-34910457)
[»] scaffold0050 (1 HSPs)
scaffold0050 (128-206)||(58757-58835)
[»] scaffold0024 (1 HSPs)
scaffold0024 (177-293)||(21311-21420)
[»] scaffold0103 (1 HSPs)
scaffold0103 (154-193)||(52005-52044)
[»] scaffold0699 (1 HSPs)
scaffold0699 (126-194)||(6909-6978)
[»] scaffold0020 (1 HSPs)
scaffold0020 (66-99)||(159888-159921)
[»] scaffold0147 (1 HSPs)
scaffold0147 (169-213)||(23639-23683)
[»] scaffold0018 (1 HSPs)
scaffold0018 (169-221)||(178343-178395)


Alignment Details
Target: chr1 (Bit Score: 440; Significance: 0; HSPs: 90)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 440; E-Value: 0
Query Start/End: Original strand, 1 - 477
Target Start/End: Original strand, 37631409 - 37631895
Alignment:
Q  1 acaaagaatatcaccactcacaacatttaactgcaagcaaataaagttaaataacaataacatatggcctgtttggattggcttatttgagctcatctat 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  37631409 acaaagaatatcaccactcacaacatttaactgcaagcaaataaagttaaataacaataacatatggcctgtttggattggcttatttgagctcatctat 37631508  T
Q  101 tagcataagtttagtgaaaccgtcatggaaaacttatgaaaacagcttctgacaattttcacaagcttttttcagcttattttcataagttctccaaaat 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  37631509 tagcataagtttagtgaaaccgtcatggaaaacttatgaaaacagcttctgacaattttcacaagcttttttcagcttattttcataagttctccaatat 37631608  T
Q  201 agcttacaaaaacagctaatatcatacacaaaaacaatttagcttcattttatctttctctataaagat----------agcttatgtataagcgcttat 290  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||          |||||||||||||||||||||    
T  37631609 agcttacaaaaacagctaatatcatacacaaaaacaatttagcttcattttatctttctctataaagatagcttatgtaagcttatgtataagcgcttat 37631708  T
Q  291 cataataagctgttcaccaaacaagcccatactgagacacgcaaataacaatgcaaccctaaaattcaatctaaacacgataaacaacagaaattgatcc 390  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  37631709 cataataagctgttcaccaaacaagcccatactgagacacgcaaataacaatgcaaccctaaaattcaatctaaacacgataaacaacataaattgatcc 37631808  T
Q  391 tagaattcaaaccctagcatacctgttgttgaaaaggtgggacccatttttcatgcatccattcacggtgaagtctgtgctcctcct 477  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  37631809 tagaattcaaaccctagcatacctgttgttgaaaaggtgggacccatttttcatgcatccattcacggtgaagtctgagctcctcct 37631895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 64 - 254
Target Start/End: Original strand, 14576567 - 14576756
Alignment:
Q  64 atggcctgtttggattggcttatttgagctcatctattagcataagtttagtgaaaccgtcatggaaaacttatgaaaacagcttctgacaattttcaca 163  Q
    |||||||||||||||||||||||||||||| ||||| | || ||| ||| |||  || ||   ||| ||||| |||||||||||| |||||||||||| |    
T  14576567 atggcctgtttggattggcttatttgagcttatctactggcttaaattttgtggcactgtttgggacaacttgtgaaaacagcttatgacaattttcaaa 14576666  T
Q  164 agcttttttcagcttattttcataagttctccaaaatagcttacaaaaacagctaatatcatacacaaaaacaatttagcttcattttatc 254  Q
    |||||||||||||||||||||| |||||||| || |||||||| ||||| |  | ||| |||| |||||||||||||| ||| ||||||||    
T  14576667 agcttttttcagcttattttca-aagttctctaatatagcttataaaaaaaaattatagcatatacaaaaacaatttaactttattttatc 14576756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 67 - 257
Target Start/End: Complemental strand, 473317 - 473128
Alignment:
Q  67 gcctgtttggattggcttatttgagctcatctattagcataagtttagtgaaaccgtcatggaaaacttatgaaaacagcttctgacaattttcacaagc 166  Q
    |||||||| |||||||||||||||||  ||||| | |||||||||  |||||||  |   ||| |||||||||||| ||||| | |||||||||| ||||    
T  473317 gcctgtttagattggcttatttgagcctatctactggcataagttctgtgaaacattttgggagaacttatgaaaaaagcttat-acaattttcataagc 473219  T
Q  167 ttttttcagcttattttcataagttctccaaaatagcttacaaaaacagctaatatcatacacaaaaacaatttagcttcattttatcttt 257  Q
    |||||||| |||||||||||||||||||||| | | |||| ||||||| || ||| ||||||| ||||||||||| ||| |||||| ||||    
T  473218 ttttttcaacttattttcataagttctccaatagaacttataaaaacaacttatagcatacacgaaaacaatttaactttattttaccttt 473128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 139 - 276
Target Start/End: Complemental strand, 7862160 - 7862023
Alignment:
Q  139 aaaacagcttctgacaattttcacaagcttttttcagcttattttcataagttctccaaaatagcttacaaaaacagctaatatcatacacaaaaacaat 238  Q
    ||||||||||||||||||||||||||||||| ||  |||||||||| || ||||| | | |||||||| | |||||||| ||| |||| |||||||||||    
T  7862160 aaaacagcttctgacaattttcacaagctttctttggcttattttcttatgttctgcgatatagcttatagaaacagcttatagcatagacaaaaacaat 7862061  T
Q  239 ttagcttcattttatctttctctataaagatagcttat 276  Q
    ||| | ||||||||||||| |||||||| |||||||||    
T  7862060 ttaccatcattttatctttttctataaaaatagcttat 7862023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 69 - 241
Target Start/End: Original strand, 3233933 - 3234105
Alignment:
Q  69 ctgtttggattggcttatttgagctcatctattagcataagtttagtgaaaccgtcatggaaaacttatgaaaacagcttctgacaattttcacaagctt 168  Q
    |||||||||||| |||||||||||| ||||| |  | ||||||| |||| || || | ||| |||||||||||||| ||| | ||| |||||| ||| ||    
T  3233933 ctgtttggattgacttatttgagcttatctagtgccgtaagttttgtgagactgttagggagaacttatgaaaacaacttataacagttttcataagttt 3234032  T
Q  169 ttttcagcttattttcataagttctccaaaatagcttacaaaaacagctaatatcatacacaaaaacaattta 241  Q
    |||||  |||||||||||||||||||||| |||||||| ||||||| || ||| |||| ||||||||||||||    
T  3234033 ttttctacttattttcataagttctccaatatagcttataaaaacaacttatagcatatacaaaaacaattta 3234105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 66 - 241
Target Start/End: Complemental strand, 2295251 - 2295079
Alignment:
Q  66 ggcctgtttggattggcttatttgagctcatctattagcataagtttagtgaaaccgtcatggaaaacttatgaaaacagcttctgacaattttcacaag 165  Q
    |||||||||| ||||||||||||||||| ||||| | |||||||||| |||| || ||   ||| |||||||||||||||||| |||||||||||| |||    
T  2295251 ggcctgtttgaattggcttatttgagcttatctactggcataagttttgtgagactgtttgggagaacttatgaaaacagcttatgacaattttcataag 2295152  T
Q  166 cttttttcagcttattttcataagttctccaaaatagcttacaaaaacagctaatatcatacacaaaaacaattta 241  Q
    || | |||| |||||||||| ||||||||  | |||||||| ||||| |||   || |||| ||||||||||||||    
T  2295151 ctctattcaacttattttcacaagttctctgatatagcttataaaaatagc---tagcatatacaaaaacaattta 2295079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 131 - 234
Target Start/End: Complemental strand, 49938837 - 49938734
Alignment:
Q  131 aacttatgaaaacagcttctgacaattttcacaagcttttttcagcttattttcataagttctccaaaatagcttacaaaaacagctaatatcatacaca 230  Q
    |||||||||||||||||| |||||||||||| |||||||||||| ||||||||||||||||||| || |||||||| ||||||| || ||| |||| |||    
T  49938837 aacttatgaaaacagcttatgacaattttcaaaagcttttttcaacttattttcataagttctctaatatagcttataaaaacaacttataacatataca 49938738  T
Q  231 aaaa 234  Q
    ||||    
T  49938737 aaaa 49938734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 134 - 256
Target Start/End: Original strand, 24915034 - 24915156
Alignment:
Q  134 ttatgaaaacagcttctgacaattttcacaagcttttttcagcttattttcataagttctccaaaatagcttacaaaaacagctaatatcatacacaaaa 233  Q
    ||||||||||| ||| ||||| |||||| |||||||||||| |||||||||| ||||||||||| | ||||||  ||||||||| ||| |||| ||||||    
T  24915034 ttatgaaaacaacttatgacatttttcataagcttttttcaacttattttcacaagttctccaagacagcttatgaaaacagcttatagcatatacaaaa 24915133  T
Q  234 acaatttagcttcattttatctt 256  Q
    |||||||| ||| ||||||||||    
T  24915134 acaatttaactttattttatctt 24915156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 154 - 279
Target Start/End: Complemental strand, 47432162 - 47432038
Alignment:
Q  154 aattttcacaagcttttttcagcttattttcataagttctccaaaatagcttacaaaaacagctaatatcatacacaaaaacaatttagcttcattttat 253  Q
    ||||||||||||||||||||||||||||||||||| |||| ||| ||| ||||  |||||| || ||| ||||  ||||||||||||| ||| |||||||    
T  47432162 aattttcacaagcttttttcagcttattttcataaattcttcaatataactta-taaaacaccttatagcatattcaaaaacaatttaactttattttat 47432064  T
Q  254 ctttctctataaagatagcttatgta 279  Q
    |||| |||||||| ||||||||||||    
T  47432063 ctttttctataaaaatagcttatgta 47432038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 131 - 241
Target Start/End: Original strand, 17603364 - 17603474
Alignment:
Q  131 aacttatgaaaacagcttctgacaattttcacaagcttttttcagcttattttcataagttctccaaaatagcttacaaaaacagctaatatcatacaca 230  Q
    |||||| ||||||||||| |||||||||||| || |||||| || |||||||||| ||||||||||| |||||||| ||||||| || ||| |||| |||    
T  17603364 aacttacgaaaacagcttatgacaattttcataaactttttacaacttattttcagaagttctccaatatagcttataaaaacaacttatagcatataca 17603463  T
Q  231 aaaacaattta 241  Q
    |||||||||||    
T  17603464 aaaacaattta 17603474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 66 - 194
Target Start/End: Complemental strand, 33186461 - 33186332
Alignment:
Q  66 ggcctgtttggattggcttatttgagctcatctattagcataagtttagtgaaaccgtcatggaaaacttatgaaaacagcttctgacaa-ttttcacaa 164  Q
    |||||||||||||||||||||||||| | |||  || |||||||||| |||| || |||  ||| ||||||||||||| | || |||||| |||||| ||    
T  33186461 ggcctgtttggattggcttatttgagtttatccgttggcataagttttgtgagactgtctaggagaacttatgaaaactggttatgacaatttttcaaaa 33186362  T
Q  165 gcttttttcagcttattttcataagttctc 194  Q
    ||||||||||||||||||  ||||||||||    
T  33186361 gcttttttcagcttatttatataagttctc 33186332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 136 - 217
Target Start/End: Original strand, 51929524 - 51929605
Alignment:
Q  136 atgaaaacagcttctgacaattttcacaagcttttttcagcttattttcataagttctccaaaatagcttacaaaaacagct 217  Q
    ||||||||||||| |||||||||||| |||||||||||| ||||||| |||||||||||||| |||| ||| ||||||||||    
T  51929524 atgaaaacagcttatgacaattttcataagcttttttcaacttatttccataagttctccaatatagtttataaaaacagct 51929605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 66 - 194
Target Start/End: Complemental strand, 15477708 - 15477592
Alignment:
Q  66 ggcctgtttggattggcttatttgagctcatctattagcataagtttagtgaaaccgtcatggaaaacttatgaaaacagcttctgacaattttcacaag 165  Q
    |||||||||||||||||||||| ||||| ||||| | |||||||||| ||            || |||||||||||||||||| |||||||||||| |||    
T  15477708 ggcctgtttggattggcttattagagcttatctacttgcataagttttgt------------gagaacttatgaaaacagcttatgacaattttcaaaag 15477621  T
Q  166 cttttttcagcttattttcataagttctc 194  Q
    ||||||||||||||| |||||||||||||    
T  15477620 cttttttcagcttatattcataagttctc 15477592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 158 - 276
Target Start/End: Original strand, 27820344 - 27820461
Alignment:
Q  158 ttcacaagcttttttcagcttattttcataagttctccaaaatagcttacaaaaacagctaatatcatacacaaaaacaatttagcttcattttatcttt 257  Q
    |||| ||||| |||||||||||||||||||| |||||||| |||||||| |||||||||  ||| | || ||| |||||||||||||| ||||||| |||    
T  27820344 ttcataagctattttcagcttattttcataaattctccaagatagcttataaaaacagcatatagcttatacataaacaatttagctttattttatattt 27820443  T
Q  258 ctctataaagatagcttat 276  Q
      ||||||| |||||||||    
T  27820444 -actataaaaatagcttat 27820461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 57 - 217
Target Start/End: Complemental strand, 5741770 - 5741610
Alignment:
Q  57 ataacatatggcctgtttggattggcttatttgagctcatctattagcataagtttagtgaaaccgtcatggaaaacttatgaaaacagcttctgacaat 156  Q
    |||||| ||| ||| |||||||||||||||||||||| | ||| | |||||||||| ||  ||| ||   ||| |||||||||||||| ||| |||||||    
T  5741770 ataacaaatgacctctttggattggcttatttgagcttaactacttgcataagttttgttgaactgtttgggagaacttatgaaaacaacttatgacaat 5741671  T
Q  157 tttcacaagc-ttttttcagcttattttcataagttctccaaaatagcttacaaaaacagct 217  Q
    || || |||  ||||||||||| |||||||||||||||| || |||||||| ||||| ||||    
T  5741670 tt-cataagtattttttcagctgattttcataagttctctaatatagcttataaaaatagct 5741610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 68 - 257
Target Start/End: Complemental strand, 13810151 - 13809962
Alignment:
Q  68 cctgtttggattggcttatttgagctcatctattagcataagtttagtgaaaccgtcatggaaaacttatgaaaacagcttctgacaattttcacaagct 167  Q
    ||||| |||||||||||||||| ||| ||||| |  | ||||||| |||| ||  |  | || |||||||||| |||| || |||||||||||| ||| |    
T  13810151 cctgtatggattggcttatttgtgcttatctactgacgtaagttttgtgagactcttttagagaacttatgaatacagtttatgacaattttcaaaagtt 13810052  T
Q  168 tttttcagcttattttcataagttctccaaaatagcttacaaaaacagctaatatcatacacaaaaacaatttagcttcattttatcttt 257  Q
    ||| | |||||||||||| |||||||| || |||| ||| |||||||    ||| |||| |||||||||||||| ||| |||||||||||    
T  13810051 tttcttagcttattttcacaagttctctaatatagtttataaaaacaatatatagcatatacaaaaacaatttaactttattttatcttt 13809962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 80 - 193
Target Start/End: Complemental strand, 29904892 - 29904779
Alignment:
Q  80 ggcttatttgagctcatctattagcataagtttagtgaaaccgtcatggaaaacttatgaaaacagcttctgacaattttcacaagcttttttcagctta 179  Q
    |||||||||||||| ||||| | |||||||||| |||| || ||    || ||||||| |||||||||| || ||||||||| |||||||||||| ||||    
T  29904892 ggcttatttgagcttatctacttgcataagttttgtgagactgtttgagagaacttataaaaacagcttatggcaattttcaaaagcttttttcacctta 29904793  T
Q  180 ttttcataagttct 193  Q
    ||||||||||||||    
T  29904792 ttttcataagttct 29904779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 72 - 239
Target Start/End: Complemental strand, 2778040 - 2777874
Alignment:
Q  72 tttggattggcttatttgagctcatctattagcataagtttagtgaaaccgtcatggaaaacttatgaaaacagcttctgacaattttcacaagcttttt 171  Q
    ||||||||||||||||| |||| ||||||| |||||||||| |||| || ||   ||| ||||||||||| || ||| ||||  | |||| ||||  |||    
T  2778040 tttggattggcttattttagcttatctatttgcataagttttgtgagactgtttaggagaacttatgaaaccaacttatgacg-tattcataagccgttt 2777942  T
Q  172 tcagcttattttcataagttctccaaaatagcttacaaaaacagctaatatcatacacaaaaacaatt 239  Q
    ||||||||||||||||||||||||||  || ||||  ||||||||| ||| | || ||||| ||||||    
T  2777941 tcagcttattttcataagttctccaagttaacttattaaaacagcttatagcttatacaaagacaatt 2777874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 143 - 257
Target Start/End: Complemental strand, 51688782 - 51688669
Alignment:
Q  143 cagcttctgacaattttcacaagcttttttcagcttattttcataagttctccaaaatagcttacaaaaacagctaatatcatacacaaaaacaatttag 242  Q
    |||||| ||||| |||||| ||| ||||||||||||| ||||||||| ||||||  ||||||||| |||||| || ||| |||  ||||||||||||||     
T  51688782 cagcttatgacacttttcagaagtttttttcagcttaatttcataag-tctccacgatagcttacgaaaacaacttatagcatgtacaaaaacaatttat 51688684  T
Q  243 cttcattttatcttt 257  Q
    ||| |||||||||||    
T  51688683 ctttattttatcttt 51688669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 57 - 217
Target Start/End: Complemental strand, 5721089 - 5720929
Alignment:
Q  57 ataacatatggcctgtttggattggcttatttgagctcatctattagcataagtttagtgaaaccgtcatggaaaacttatgaaaacagcttctgacaat 156  Q
    |||||| ||| ||| |||||||||||||||||||||| | ||| | |||||||||| ||   || ||   ||| |||||||||||||||||| |||||||    
T  5721089 ataacaaatgacctctttggattggcttatttgagcttaactacttgcataagttttgttggactgtttgggagaacttatgaaaacagcttatgacaat 5720990  T
Q  157 tttcacaagc-ttttttcagcttattttcataagttctccaaaatagcttacaaaaacagct 217  Q
    || || |||  ||||||||||| ||||||||| |||||| || |||||||| ||||| ||||    
T  5720989 tt-cataagtattttttcagctgattttcatatgttctctaatatagcttataaaaatagct 5720929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 131 - 271
Target Start/End: Original strand, 41184630 - 41184770
Alignment:
Q  131 aacttatgaaaacagcttctgacaattttcacaagcttttttcagcttattttcataagttctccaaaatagcttacaaaaacagctaatatcatacaca 230  Q
    |||||||||||| ||||| |||||||||||| ||| |||||||| |||||||||||||||| ||||| || |  || |||| ||  | |||  ||| |||    
T  41184630 aacttatgaaaatagcttatgacaattttcataagtttttttcaacttattttcataagttttccaatatggtatataaaaccaaattataatatataca 41184729  T
Q  231 aaaacaatttagcttcattttatctttctctataaagatag 271  Q
    ||||||||||| | | |||||||||||  ||||||| ||||    
T  41184730 aaaacaatttaacattattttatcttttgctataaaaatag 41184770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 143 - 235
Target Start/End: Complemental strand, 42174933 - 42174841
Alignment:
Q  143 cagcttctgacaattttcacaagcttttttcagcttattttcataagttctccaaaatagcttacaaaaacagctaatatcatacacaaaaac 235  Q
    |||||| |||||||||||| ||||| |||| | |||||||||||||||||||||| ||| |||| ||||||| || ||| |||| ||||||||    
T  42174933 cagcttatgacaattttcataagctgtttttaacttattttcataagttctccaatataacttataaaaacaacttatagcatatacaaaaac 42174841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 60 - 203
Target Start/End: Original strand, 43230681 - 43230822
Alignment:
Q  60 acatatggcctgtttggattggcttatttgagctcatctattagcataagtttagtgaaaccgtcatggaaaacttatgaaaacagcttctgacaatttt 159  Q
    ||||||||||||||||||||||| ||||||||||  |||| | ||||||||||   || |  ||   ||| || |||||||||||||||  |||| ||||    
T  43230681 acatatggcctgtttggattggcatatttgagcttctctactggcataagttttacgagattgtttaggagaatttatgaaaacagctt--gacagtttt 43230778  T
Q  160 cacaagcttttttcagcttattttcataagttctccaaaatagc 203  Q
     | |||||||||||| ||||||||||| |||||||||| |||||    
T  43230779 tataagcttttttcaacttattttcattagttctccaatatagc 43230822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 140 - 275
Target Start/End: Original strand, 836328 - 836463
Alignment:
Q  140 aaacagcttctgacaattttcacaagcttttttcagcttattttcataagttctccaaaatagcttacaaaaacagctaatatcatacacaaaaacaatt 239  Q
    ||||||||| |||||||  ||| ||| | |||| |||| |||||||| |||| ||  |||||||||| ||||| | || ||| | || ||||||||||||    
T  836328 aaacagcttatgacaatgctcataagttgtttttagctcattttcattagttttcttaaatagcttataaaaataacttatagcttatacaaaaacaatt 836427  T
Q  240 tagcttcattttatctttctctataaagatagctta 275  Q
    ||| || |||||||||||| ||||||| ||||||||    
T  836428 tagttttattttatctttcactataaaaatagctta 836463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 131 - 214
Target Start/End: Original strand, 30286499 - 30286582
Alignment:
Q  131 aacttatgaaaacagcttctgacaattttcacaagcttttttcagcttattttcataagttctccaaaatagcttacaaaaaca 214  Q
    |||||||||||||||||| |||||||||||| |||||||||||| || | |||  | |||||| |||||||||||| |||||||    
T  30286499 aacttatgaaaacagcttatgacaattttcataagcttttttcaactaaattttcttagttcttcaaaatagcttataaaaaca 30286582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 131 - 206
Target Start/End: Complemental strand, 37473493 - 37473418
Alignment:
Q  131 aacttatgaaaacagcttctgacaattttcacaagcttttttcagcttattttcataagttctccaaaatagctta 206  Q
    ||||| |||||||| ||| ||||| |||||| ||||||||| ||||||||||||||||||||||||| ||| ||||    
T  37473493 aacttttgaaaacaacttatgacatttttcataagctttttccagcttattttcataagttctccaagataactta 37473418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 131 - 214
Target Start/End: Original strand, 38503445 - 38503528
Alignment:
Q  131 aacttatgaaaacagcttctgacaattttcacaagcttttttcagcttattttcataagttctccaaaatagcttacaaaaaca 214  Q
    |||||||| ||||||| | ||||| | |||| ||| | ||||||||||||||||||||||||||||| |||||| |||||||||    
T  38503445 aacttatggaaacagcctatgacattgttcataagttgttttcagcttattttcataagttctccaagatagctaacaaaaaca 38503528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 153 - 239
Target Start/End: Original strand, 1510312 - 1510398
Alignment:
Q  153 caattttcacaagcttttttcagcttattttcataagttctccaaaatagcttacaaaaacagctaatatcatacacaaaaacaatt 239  Q
    ||||||||| |||||||||||| ||||||||| |||||||||||| | |||||| ||||||| || ||| | || ||||||||||||    
T  1510312 caattttcataagcttttttcaacttattttcgtaagttctccaatagagcttataaaaacaacttataacctatacaaaaacaatt 1510398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 126 - 279
Target Start/End: Complemental strand, 27976699 - 27976537
Alignment:
Q  126 tggaaaacttatgaaaacagcttctgacaattttcacaagcttttttcagcttattttca---------taagttctccaaaatagcttacaaaaacagc 216  Q
    |||||||||| |||||| ||||| ||||| |||||| |||||||||||||||||||||||         ||||||||| || ||||||||  |||||| |    
T  27976699 tggaaaacttttgaaaatagcttatgacatttttcataagcttttttcagcttattttcattatttcattaagttctcgaagatagcttatgaaaacaac 27976600  T
Q  217 taatatcatacacaaaaacaatttagcttcattttatctttctctataaagatagcttatgta 279  Q
    | ||| |||| |||||||||||||| |||  ||  ||| ||  ||||||| ||||||||||||    
T  27976599 ttatagcatatacaaaaacaatttaactttgttcaatcatttgctataaaaatagcttatgta 27976537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 66 - 237
Target Start/End: Complemental strand, 36872883 - 36872716
Alignment:
Q  66 ggcctgtttggattggcttatttgagctcatctattagcataagtttagtgaaaccgtcatggaaaacttatgaaaacagcttctgacaattttcacaag 165  Q
    ||||||||||||||||||||||| |||| | |||  | ||||||||| | || || ||  |||| || ||||||||||   || |||||||||| | |||    
T  36872883 ggcctgtttggattggcttatttaagcttaactaacaacataagttttgcgagactgttttggagaatttatgaaaac---ttatgacaattttgataag 36872787  T
Q  166 cttttttcagcttattttcataagttctccaaaatagcttacaaaaacagctaatatcatacacaaaaacaa 237  Q
    |||||| || |||||||||||||||||| ||| |||||||  ||||||| || ||| || | ||||||||||    
T  36872786 cttttt-caacttattttcataagttctgcaatatagcttgtaaaaacaacttatagcacatacaaaaacaa 36872716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 131 - 279
Target Start/End: Complemental strand, 41505774 - 41505629
Alignment:
Q  131 aacttatgaaaacagcttctgacaattttcacaagctttttt---cagcttattttcataagttctccaaaatagcttacaaaaacagctaatatcatac 227  Q
    |||||||||||||||||| ||||||||||| |||| ||||||   | ||||||      ||||||||||| |||||||| |||||||||| ||| ||||     
T  41505774 aacttatgaaaacagcttatgacaattttcccaagtttttttttccggcttata-----aagttctccaatatagcttataaaaacagcttataacatat 41505680  T
Q  228 acaaaaacaatttagcttcattttatctttctctataaagatagcttatgta 279  Q
    || ||||||||||| ||| | |||| | || |||||||| ||||||||||||    
T  41505679 acgaaaacaatttaactttaattta-cgttttctataaaaatagcttatgta 41505629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 134 - 206
Target Start/End: Complemental strand, 7941693 - 7941621
Alignment:
Q  134 ttatgaaaacagcttctgacaattttcacaagcttttttcagcttattttcataagttctccaaaatagctta 206  Q
    ||||||||||||||| ||||| | |||  ||||| |||||| |||||||||||||||||||| ||||||||||    
T  7941693 ttatgaaaacagcttatgacattgttccgaagctattttcaacttattttcataagttctccgaaatagctta 7941621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 163 - 254
Target Start/End: Original strand, 1565547 - 1565638
Alignment:
Q  163 aagcttttttcagcttattttcataagttctccaaaatagcttacaaaaacagctaatatcatacacaaaaacaatttagcttcattttatc 254  Q
    ||||| |||||||||||||||||| || |||||||||||| |||  ||||||||| | |   || |||||||||||||| ||||||||||||    
T  1565547 aagctgttttcagcttattttcatgagctctccaaaatagattaagaaaacagcttacactttatacaaaaacaatttaacttcattttatc 1565638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 131 - 241
Target Start/End: Complemental strand, 6557062 - 6556951
Alignment:
Q  131 aacttatgaaaacagcttctgacaattttcacaagcttttttc-agcttattttcataagttctccaaaatagcttacaaaaacagctaatatcatacac 229  Q
    |||||||||||| ||||| ||||| |||||| ||| ||||||  |||||||| |||||||||||  || ||| |||| ||||||| || ||| |||| ||    
T  6557062 aacttatgaaaatagcttatgacagttttcaaaaggttttttttagcttattgtcataagttctttaatataacttataaaaacaacttataacatatac 6556963  T
Q  230 aaaaacaattta 241  Q
    ||||||||||||    
T  6556962 aaaaacaattta 6556951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 131 - 241
Target Start/End: Original strand, 27970274 - 27970385
Alignment:
Q  131 aacttatgaaaacagcttctgacaattttcacaagcttttttcagcttattttcataagttctcc-aaaatagcttacaaaaacagctaatatcatacac 229  Q
    ||||||| ||||| | || ||||| |||||| ||||||||||||| |||||||||||||||| || ||||||| |||   ||||| || ||| |||| ||    
T  27970274 aacttataaaaacggtttatgacatttttcataagcttttttcagtttattttcataagttccccaaaaatagtttatggaaacaacttatagcatatac 27970373  T
Q  230 aaaaacaattta 241  Q
    ||||||||||||    
T  27970374 aaaaacaattta 27970385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 131 - 190
Target Start/End: Original strand, 37517146 - 37517205
Alignment:
Q  131 aacttatgaaaacagcttctgacaattttcacaagcttttttcagcttattttcataagt 190  Q
    |||||| ||||||||||| |||||||||||| ||||||||||||  ||||||||||||||    
T  37517146 aacttacgaaaacagcttatgacaattttcaaaagcttttttcaatttattttcataagt 37517205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 131 - 194
Target Start/End: Original strand, 40977383 - 40977446
Alignment:
Q  131 aacttatgaaaacagcttctgacaattttcacaagcttttttcagcttattttcataagttctc 194  Q
    ||||||||||||||  || |||||||||||| ||||||||| ||||||||||||||| ||||||    
T  40977383 aacttatgaaaacaatttatgacaattttcaaaagctttttccagcttattttcatatgttctc 40977446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 158 - 257
Target Start/End: Original strand, 51695502 - 51695600
Alignment:
Q  158 ttcacaagcttttttcagcttattttcataagttctccaaaatagcttacaaaaacagctaatatcatacacaaaaacaatttagcttcattttatcttt 257  Q
    |||| ||||| |||||||||||||||||||| |||||||| ||||||||  |||||| || ||| | || || ||||||||||| ||| |||||||||||    
T  51695502 ttcataagctattttcagcttattttcataaattctccaagatagcttatgaaaacatctgataacttatacgaaaacaattta-ctttattttatcttt 51695600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 139 - 217
Target Start/End: Complemental strand, 6292574 - 6292497
Alignment:
Q  139 aaaacagcttctgacaattttcacaagcttttttcagcttattttcataagttctccaaaatagcttacaaaaacagct 217  Q
    |||||||||| ||||| | |||| ||||| ||||||||||||||||||||| |||||||||||| |||| |||| ||||    
T  6292574 aaaacagcttatgaca-tgttcataagctgttttcagcttattttcataagctctccaaaatagtttacgaaaatagct 6292497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 131 - 217
Target Start/End: Original strand, 7136979 - 7137064
Alignment:
Q  131 aacttatgaaaacagcttctgacaattttcacaagcttttttcagcttattttcataagttctccaaaatagcttacaaaaacagct 217  Q
    ||||||||||||  |||| ||||| | |||| ||| | ||||||||||||||||||||||||||||| ||||||||  |||||||||    
T  7136979 aacttatgaaaatcgcttatgaca-tattcataagttattttcagcttattttcataagttctccaagatagcttatgaaaacagct 7137064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 163 - 293
Target Start/End: Complemental strand, 30581859 - 30581730
Alignment:
Q  163 aagcttttttcagcttattttcataagttctccaaaatagcttacaaaaacagctaatatcatacacaaaaacaatttagcttcattttatctttctcta 262  Q
    ||||| |||||| |||||||||||||| || | || || ||||| ||||| | || ||| |||| | |||||||||||| ||| |||| ||| || ||||    
T  30581859 aagctgttttcaacttattttcataagctcccaaatatggcttataaaaaaa-cttatagcatataaaaaaacaatttaactttatttcatcgttttcta 30581761  T
Q  263 taaagatagcttatgtataagcgcttatcat 293  Q
    |||| |||||||||||||||  |||||||||    
T  30581760 taaaaatagcttatgtataactgcttatcat 30581730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 163 - 241
Target Start/End: Original strand, 41195205 - 41195283
Alignment:
Q  163 aagcttttttcagcttattttcataagttctccaaaatagcttacaaaaacagctaatatcatacacaaaaacaattta 241  Q
    ||||||||||||||||||||||||||||||||||| |||| |||  ||||||| | |||  ||| ||||||||| ||||    
T  41195205 aagcttttttcagcttattttcataagttctccaagatagtttatgaaaacagttgatagtatatacaaaaacagttta 41195283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 169 - 300
Target Start/End: Complemental strand, 34290288 - 34290160
Alignment:
Q  169 ttttcagcttattttcataagttctccaaaatagcttacaaaaacagctaatatcatacacaaaaacaatttagcttcattttatctttctctataaaga 268  Q
    ||||||||||||||||||||||||| ||| ||||||||  ||||||||| ||| | || ||||||  || ||| ||| |||||||||| |  || |        
T  34290288 ttttcagcttattttcataagttcttcaagatagcttatgaaaacagcttatagcttatacaaaataaaattaactttattttatcttgcggtaca---g 34290192  T
Q  269 tagcttatgtataagcgcttatcataataagc 300  Q
    ||| |||| |||||||||||||||||||||||    
T  34290191 tagtttatatataagcgcttatcataataagc 34290160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 164 - 257
Target Start/End: Complemental strand, 49888824 - 49888731
Alignment:
Q  164 agcttttttcagcttattttcataagttctccaaaatagcttacaaaaacagctaatatcatacacaaaaacaatttagcttcattttatcttt 257  Q
    |||| ||||| |||||||||||||||||||| || ||||||||  |||||| |||||| | || || ||||||||| | ||| |||||||||||    
T  49888824 agctattttcggcttattttcataagttctctaagatagcttatgaaaacaactaatagcttatacgaaaacaattaaactttattttatcttt 49888731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 189 - 256
Target Start/End: Original strand, 3069972 - 3070040
Alignment:
Q  189 gttctccaaaatagcttacaaaaacagctaatatcatacac-aaaaacaatttagcttcattttatctt 256  Q
    ||||||||| ||||||||| ||||||||| ||| |||| || |||||||||||| ||||||||||||||    
T  3069972 gttctccaagatagcttacgaaaacagcttatagcatatacgaaaaacaatttaacttcattttatctt 3070040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 134 - 214
Target Start/End: Complemental strand, 5709713 - 5709634
Alignment:
Q  134 ttatgaaaacagcttctgacaattttcacaagcttttttcagcttattttcataagttctccaaaatagcttacaaaaaca 214  Q
    ||||||||| ||||| || ||||||||| ||||||||| || |||||||||| ||||||||||| |||||||  |||||||    
T  5709713 ttatgaaaatagcttttggcaattttcataagcttttt-caacttattttcacaagttctccaatatagcttctaaaaaca 5709634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 158 - 299
Target Start/End: Complemental strand, 15784392 - 15784257
Alignment:
Q  158 ttcacaagcttttttcagcttattttcataagttctccaaaatagcttacaaaaacagctaatatcatacacaaaaacaatttagcttcattttatcttt 257  Q
    |||||||| | |||| |||||||||||| ||||||||||| |||||||| |||| |||||       || || ||||||||||| ||| |||||| ||||    
T  15784392 ttcacaagttgtttttagcttattttcacaagttctccaagatagcttataaaaccagct-------tatacgaaaacaatttaactttattttaccttt 15784300  T
Q  258 ct-ctataaagatagcttatgtataagcgcttatcataataag 299  Q
     | || || | |||||||||  |||||||||||||||||||||    
T  15784299 ttactttagaaatagcttatacataagcgcttatcataataag 15784257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 199 - 279
Target Start/End: Original strand, 30581996 - 30582076
Alignment:
Q  199 atagcttacaaaaacagctaatatcatacacaaaaacaatttagcttcattttatctttctctataaagatagcttatgta 279  Q
    |||||||| ||||||||||  || |||| |||||||||| ||| ||| ||||||||||| |||||||| ||| ||||||||    
T  30581996 atagcttataaaaacagcttgtagcatatacaaaaacaagttaactttattttatctttttctataaaaataccttatgta 30582076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 131 - 238
Target Start/End: Complemental strand, 1509841 - 1509734
Alignment:
Q  131 aacttatgaaaacagcttctgacaattttcacaagcttttttcagcttattttcataagttctccaaaatagcttacaaaaacagctaatatcatacaca 230  Q
    ||||| || ||||||||| ||  |||| ||| |||||||||||| ||||||| || ||||||||||| | |||||| ||||||| || ||  |||| |||    
T  1509841 aacttttggaaacagcttatggaaattctcataagcttttttcaacttatttacacaagttctccaacagagcttataaaaacaacttattacatataca 1509742  T
Q  231 aaaacaat 238  Q
    ||||||||    
T  1509741 aaaacaat 1509734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 127 - 206
Target Start/End: Original strand, 37593661 - 37593739
Alignment:
Q  127 ggaaaacttatgaaaacagcttctgacaattttcacaagcttttttcagcttattttcataagttctccaaaatagctta 206  Q
    |||||||| ||||| ||| ||| ||||| | |||| ||||| ||||||||||||||||||||| ||| ||||||||||||    
T  37593661 ggaaaactaatgaacacaacttatgaca-tgttcataagctgttttcagcttattttcataagctcttcaaaatagctta 37593739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 158 - 217
Target Start/End: Complemental strand, 45975753 - 45975694
Alignment:
Q  158 ttcacaagcttttttcagcttattttcataagttctccaaaatagcttacaaaaacagct 217  Q
    |||| ||||| |||||||||||||||||||| |||||||| ||||||||  |||||||||    
T  45975753 ttcataagctgttttcagcttattttcataaattctccaagatagcttatgaaaacagct 45975694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 163 - 217
Target Start/End: Complemental strand, 35179197 - 35179143
Alignment:
Q  163 aagcttttttcagcttattttcataagttctccaaaatagcttacaaaaacagct 217  Q
    ||||| |||||||||||||||||||||||||||| |||| ||||  |||||||||    
T  35179197 aagctgttttcagcttattttcataagttctccataataacttatgaaaacagct 35179143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 70 - 173
Target Start/End: Original strand, 50644174 - 50644279
Alignment:
Q  70 tgtttggattggcttatttgagctcatctattagcataagtttagtgaaaccgtcatggaaaacttatgaaaacagcttctgacaa--ttttcacaagct 167  Q
    ||||||||||| |||||||||||| ||||| || |||| |||| |||| || ||   ||| |||||||||||||| |||  |||||  ||||||||||||    
T  50644174 tgtttggattgacttatttgagcttatctactaacatatgttttgtgagactgtttgggagaacttatgaaaacaacttacgacaaatttttcacaagct 50644273  T
Q  168 tttttc 173  Q
    ||||||    
T  50644274 tttttc 50644279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 131 - 195
Target Start/End: Original strand, 3887612 - 3887676
Alignment:
Q  131 aacttatgaaaacagcttctgacaattttcacaagcttttttcagcttattttcataagttctcc 195  Q
    |||||||||||||| ||| ||||| | |||| ||||| |||| | ||||||||||||||||||||    
T  3887612 aacttatgaaaacatcttatgacattgttcataagctgtttttaacttattttcataagttctcc 3887676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 179 - 239
Target Start/End: Complemental strand, 7069343 - 7069283
Alignment:
Q  179 attttcataagttctccaaaatagcttacaaaaacagctaatatcatacacaaaaacaatt 239  Q
    ||||||||||||||||||| ||||||||||||| ||||| ||| | || || |||||||||    
T  7069343 attttcataagttctccaagatagcttacaaaagcagcttatagcttatacgaaaacaatt 7069283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 169 - 241
Target Start/End: Complemental strand, 7472363 - 7472291
Alignment:
Q  169 ttttcagcttattttcataagttctccaaaatagcttacaaaaacagctaatatcatacacaaaaacaattta 241  Q
    ||||||||||||||||||||| ||||||| ||||||||   |||||||| |||   || ||||||||||||||    
T  7472363 ttttcagcttattttcataagctctccaagatagcttatggaaacagcttatagattatacaaaaacaattta 7472291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 169 - 254
Target Start/End: Original strand, 15687364 - 15687451
Alignment:
Q  169 ttttcagcttattttcataagttctccaaaatagcttacaaaaacagctaatatc--atacacaaaaacaatttagcttcattttatc 254  Q
    ||||||||| ||||| ||||||||||||| |||| | || ||||||||| |||||  |||||| ||||||||||| ||| | ||||||    
T  15687364 ttttcagctcatttttataagttctccaagatagttaactaaaacagcttatatcttatacacgaaaacaatttaacttaactttatc 15687451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 158 - 258
Target Start/End: Original strand, 17577775 - 17577875
Alignment:
Q  158 ttcacaagcttttttcagcttattttcataagttctccaaaatagcttacaaaaacagctaatatcatacacaaaaacaatttagcttcattttatcttt 257  Q
    |||| ||||| |||| ||||||||||  |||||||| ||| ||| ||||||||||||||| ||| | |  || |||||||||||  ||||||| ||||||    
T  17577775 ttcataagctgttttaagcttatttttgtaagttcttcaagataacttacaaaaacagcttatagcttgtactaaaacaatttaaattcatttcatcttt 17577874  T
Q  258 c 258  Q
    |    
T  17577875 c 17577875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 168 - 276
Target Start/End: Original strand, 34795442 - 34795550
Alignment:
Q  168 tttttcagcttattttcataagttctccaaaatagcttacaaaaacagctaatatcatacacaaaaacaatttagcttcattttatctttctctataaag 267  Q
    |||||| | ||||||||||||||||||||| |||||| | |||||||||  ||| | || ||| | |||||| | ||  ||||||||||| || |||||     
T  34795442 tttttcggtttattttcataagttctccaatatagctaataaaaacagcatataacgtatacatagacaattaaactctattttatctttttcaataaaa 34795541  T
Q  268 atagcttat 276  Q
    |||||||||    
T  34795542 atagcttat 34795550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 167 - 279
Target Start/End: Original strand, 37769676 - 37769788
Alignment:
Q  167 ttttttcagcttattttcataagttctccaaaatagcttacaaaaacagctaatatcatacacaaaaacaatttagcttcattttatctttctctataaa 266  Q
    |||||||||||| ||||||||| |||| ||| | |||||| ||||||| ||  || |||| ||||||| |||||| ||| |||||||| ||  |||||||    
T  37769676 ttttttcagcttgttttcataaattctgcaagacagcttataaaaacaacttgtagcataaacaaaaataatttaactttattttatcatttgctataaa 37769775  T
Q  267 gatagcttatgta 279  Q
     |||  |||||||    
T  37769776 aataatttatgta 37769788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 163 - 290
Target Start/End: Complemental strand, 2294969 - 2294842
Alignment:
Q  163 aagcttttttcagcttattttcataagttctccaaaatagcttacaaaaacagctaatatcatacacaaaaacaatttagcttcattttatctttctcta 262  Q
    ||||| |||||| ||||||||| |||||||||||| |||| |||  |||| |||| ||| | ||  ||||||||||||| ||| || | ||| ||  |||    
T  2294969 aagctgttttcaccttattttcgtaagttctccaagatagtttatgaaaatagcttatagcttatccaaaaacaatttaactttatatgatcatttccta 2294870  T
Q  263 taaagatagcttatgtataagcgcttat 290  Q
    |||| ||| |||||  ||||||||||||    
T  2294869 taaaaataccttattcataagcgcttat 2294842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 182 - 217
Target Start/End: Original strand, 5894186 - 5894221
Alignment:
Q  182 ttcataagttctccaaaatagcttacaaaaacagct 217  Q
    |||||||||||||||| |||||||||||||||||||    
T  5894186 ttcataagttctccaagatagcttacaaaaacagct 5894221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 131 - 206
Target Start/End: Original strand, 10199389 - 10199463
Alignment:
Q  131 aacttatgaaaacagcttctgacaattttcacaagcttttttcagcttattttcataagttctccaaaatagctta 206  Q
    |||| ||||||| ||||| ||||| | |||| ||| | ||||||||||||||||||||| |||| |||||||||||    
T  10199389 aactcatgaaaatagcttatgaca-tgttcataagttgttttcagcttattttcataagctctctaaaatagctta 10199463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 169 - 204
Target Start/End: Complemental strand, 10809397 - 10809362
Alignment:
Q  169 ttttcagcttattttcataagttctccaaaatagct 204  Q
    ||||||||||||||||||||||||||||| ||||||    
T  10809397 ttttcagcttattttcataagttctccaatatagct 10809362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 66 - 117
Target Start/End: Original strand, 14385708 - 14385759
Alignment:
Q  66 ggcctgtttggattggcttatttgagctcatctattagcataagtttagtga 117  Q
    |||||||| ||||||||||||||||||| ||||| | |||||||||| ||||    
T  14385708 ggcctgttcggattggcttatttgagcttatctactggcataagtttcgtga 14385759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 134 - 274
Target Start/End: Complemental strand, 36872352 - 36872215
Alignment:
Q  134 ttatgaaaacagcttctgacaattttcacaagcttttttcagcttattttcataagttctccaaaatagcttacaaaaacagctaatatcatacacaaaa 233  Q
    ||||||||||||||| | | |||||||| |||||||||||| |||| |||||||  | |||||| ||||||   ||||||| || ||| |||  ||||||    
T  36872352 ttatgaaaacagcttattataattttcataagcttttttcaacttaatttcata--tgctccaatatagctagtaaaaacaacttataacat--acaaaa 36872257  T
Q  234 acaatttagc-ttcattttatctttctctataaagatagctt 274  Q
    |||||||| |  | |||||||||||  ||||||| |||||||    
T  36872256 acaatttaacaattattttatcttttgctataaaaatagctt 36872215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 133 - 212
Target Start/End: Original strand, 38170673 - 38170751
Alignment:
Q  133 cttatgaaaacagcttctgacaattttcacaagcttttttcagcttattttcataagttctccaaaatagcttacaaaaa 212  Q
    |||||||||||||||| ||||| | |||| ||| | |||||||||| ||||| |||| ||| |||| |||||||||||||    
T  38170673 cttatgaaaacagcttatgaca-tgttcataagttgttttcagcttgttttcctaagctcttcaaattagcttacaaaaa 38170751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 169 - 300
Target Start/End: Original strand, 38882930 - 38883059
Alignment:
Q  169 ttttcagcttattttcataagttctccaaaatagcttacaaaaacagctaatatcatacacaaaaacaatttagcttcattttatctttctctataaaga 268  Q
    |||||| ||||||||||||||||||| | |  ||||||  |||||| || ||||  || ||||| |||||||||| | |||| ||||||  ||||| | |    
T  38882930 ttttcaacttattttcataagttctctagag-agcttatgaaaacaacttatattttatacaaagacaatttagcgttattt-atcttttgctatagaaa 38883027  T
Q  269 tagcttatgtataagcgcttatcataataagc 300  Q
    ||||||||||| |||| |||| ||||||||||    
T  38883028 tagcttatgtacaagcacttaccataataagc 38883059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 163 - 214
Target Start/End: Original strand, 39603843 - 39603894
Alignment:
Q  163 aagcttttttcagcttattttcataagttctccaaaatagcttacaaaaaca 214  Q
    ||||| ||||||||||||||||||||| | ||||||||||| || |||||||    
T  39603843 aagctattttcagcttattttcataagctatccaaaatagcatataaaaaca 39603894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 172 - 214
Target Start/End: Complemental strand, 3224472 - 3224430
Alignment:
Q  172 tcagcttattttcataagttctccaaaatagcttacaaaaaca 214  Q
    ||||||||||||||||||||||| | ||||||||| |||||||    
T  3224472 tcagcttattttcataagttctctagaatagcttataaaaaca 3224430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 150 - 240
Target Start/End: Original strand, 7107517 - 7107606
Alignment:
Q  150 tgacaattttcacaagcttttttcagcttattttcataagttctccaaaatagcttacaaaaacagctaatatcatacacaaaaacaattt 240  Q
    ||||| |||||| |||||||| |||||||||| ||||||||||| |||||||| | |   |||||| | ||| |||| |||||||||||||    
T  7107517 tgacatttttcataagctttt-tcagcttattgtcataagttctacaaaatagttaatggaaacagtttatagcatatacaaaaacaattt 7107606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 158 - 196
Target Start/End: Original strand, 7218081 - 7218119
Alignment:
Q  158 ttcacaagcttttttcagcttattttcataagttctcca 196  Q
    |||||||||| |||||| |||||||||||||||||||||    
T  7218081 ttcacaagctgttttcaacttattttcataagttctcca 7218119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 158 - 212
Target Start/End: Complemental strand, 10280712 - 10280658
Alignment:
Q  158 ttcacaagcttttttcagcttattttcataagttctccaaaatagcttacaaaaa 212  Q
    |||| |||||||| ||||||||||||||||||||||  || ||||||||| ||||    
T  10280712 ttcataagcttttgtcagcttattttcataagttcttgaagatagcttacgaaaa 10280658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #74
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 163 - 241
Target Start/End: Complemental strand, 11893256 - 11893178
Alignment:
Q  163 aagcttttttcagcttattttcataagttctccaaaatagcttacaaaaacagctaatatcatacacaaaaacaattta 241  Q
    ||||||||||||||| |||||||| |||||| ||| ||||||||  |||||| || |  | ||| ||||||||||||||    
T  11893256 aagcttttttcagctaattttcattagttcttcaacatagcttatgaaaacaacttaagtaatatacaaaaacaattta 11893178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #75
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 153 - 275
Target Start/End: Original strand, 33546455 - 33546577
Alignment:
Q  153 caattttcacaagcttttttcagcttattttcataagttctccaaaatagcttacaaaaacagctaatatcatacacaaaaacaatttagcttcatttta 252  Q
    ||||||||| |||||||||  | | |||||||||||| ||| |||  ||||||| ||||||| || | | |||| ||||||| |||||||| ||||| ||    
T  33546455 caattttcataagctttttcaaacgtattttcataagctcttcaatctagcttataaaaacaacttagagcatatacaaaaagaatttagcgtcattata 33546554  T
Q  253 tctttctctataaagatagctta 275  Q
    || ||  | ||||| ||||||||    
T  33546555 tcctttgccataaaaatagctta 33546577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #76
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 66 - 148
Target Start/End: Complemental strand, 38247482 - 38247400
Alignment:
Q  66 ggcctgtttggattggcttatttgagctcatctattagcataagtttagtgaaaccgtcatggaaaacttatgaaaacagctt 148  Q
    |||||||||||||||| |||||||| || ||||| | |||||||||| |||  || ||   ||| ||||||||||||||||||    
T  38247482 ggcctgtttggattgggttatttgaacttatctactggcataagttttgtgtcactgtttgggagaacttatgaaaacagctt 38247400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #77
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 164 - 206
Target Start/End: Complemental strand, 51190905 - 51190863
Alignment:
Q  164 agcttttttcagcttattttcataagttctccaaaatagctta 206  Q
    |||| ||||||||||||||||||||||||| ||| ||||||||    
T  51190905 agctcttttcagcttattttcataagttcttcaagatagctta 51190863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #78
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 66 - 99
Target Start/End: Complemental strand, 2295346 - 2295313
Alignment:
Q  66 ggcctgtttggattggcttatttgagctcatcta 99  Q
    |||||||||||||||||||||||||||| |||||    
T  2295346 ggcctgtttggattggcttatttgagcttatcta 2295313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #79
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 171 - 292
Target Start/End: Complemental strand, 4576855 - 4576735
Alignment:
Q  171 ttcagcttattttcataagttctccaaaatagcttacaaaaacagctaatatcatacacaaaaacaatttagcttcattttatctttctctataaagata 270  Q
    ||||||||||||||||||||| | ||| ||||||||  ||||||||| ||| | |  ||||||| | |||| ||| |||| ||||||   |||||| | |    
T  4576855 ttcagcttattttcataagttattcaatatagcttatgaaaacagcttataacttgtacaaaaatattttaactttatttaatcttttgttataaa-aaa 4576757  T
Q  271 gcttatgtataagcgcttatca 292  Q
    ||||||| |||||||| |||||    
T  4576756 gcttatgcataagcgcctatca 4576735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #80
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 169 - 206
Target Start/End: Original strand, 12564517 - 12564554
Alignment:
Q  169 ttttcagcttattttcataagttctccaaaatagctta 206  Q
    |||||||||||||| |||||||||||||| ||||||||    
T  12564517 ttttcagcttatttccataagttctccaagatagctta 12564554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #81
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 169 - 222
Target Start/End: Complemental strand, 27140530 - 27140477
Alignment:
Q  169 ttttcagcttattttcataagttctccaaaatagcttacaaaaacagctaatat 222  Q
    |||||||||||||| |||||| ||||||  |||||||| |||||||||| ||||    
T  27140530 ttttcagcttatttgcataagctctccatgatagcttataaaaacagcttatat 27140477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #82
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 66 - 206
Target Start/End: Original strand, 39976125 - 39976268
Alignment:
Q  66 ggcctgtttggattggcttatttgagctcatctattagcataagtttagtgaaaccgtcatggaaaacttatgaaaacagcttctgacaattttcacaag 165  Q
    |||| ||||||| || |||||||||| | ||||| |  ||||||||| ||||||| ||    || |||||||||||| |  || ||||| | |||||| |    
T  39976125 ggccagtttggactgacttatttgagattatctactgacataagttttgtgaaactgtttgagagaacttatgaaaataatttatgacattgttcacacg 39976224  T
Q  166 cttttttcagcttat---tttcataagttctccaaaatagctta 206  Q
    |||| ||||| ||||   |||||||||||| |||||||||||||    
T  39976225 ctttattcaggttattattttcataagttccccaaaatagctta 39976268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #83
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 134 - 194
Target Start/End: Complemental strand, 341534 - 341474
Alignment:
Q  134 ttatgaaaacagcttctgacaattttcacaagcttttttcagcttattttcataagttctc 194  Q
    ||||||||||| ||| |||||||||||| ||| ||||||||   | |||||||||||||||    
T  341534 ttatgaaaacaacttatgacaattttcataagtttttttcaatctgttttcataagttctc 341474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #84
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 169 - 205
Target Start/End: Original strand, 1232923 - 1232959
Alignment:
Q  169 ttttcagcttattttcataagttctccaaaatagctt 205  Q
    |||||||||||||||||||| |||||||| |||||||    
T  1232923 ttttcagcttattttcataaattctccaagatagctt 1232959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #85
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 169 - 217
Target Start/End: Original strand, 5887012 - 5887060
Alignment:
Q  169 ttttcagcttattttcataagttctccaaaatagcttacaaaaacagct 217  Q
    |||||||||||||||| |||||||||||| || ||||| | ||||||||    
T  5887012 ttttcagcttattttcgtaagttctccaagatggcttatagaaacagct 5887060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #86
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 173 - 217
Target Start/End: Original strand, 9572093 - 9572137
Alignment:
Q  173 cagcttattttcataagttctccaaaatagcttacaaaaacagct 217  Q
    ||||||||||||||||||||||||  ||||| || ||||||||||    
T  9572093 cagcttattttcataagttctccatgatagcatataaaaacagct 9572137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #87
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 169 - 197
Target Start/End: Complemental strand, 10799514 - 10799486
Alignment:
Q  169 ttttcagcttattttcataagttctccaa 197  Q
    |||||||||||||||||||||||||||||    
T  10799514 ttttcagcttattttcataagttctccaa 10799486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #88
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 69 - 109
Target Start/End: Complemental strand, 11696014 - 11695974
Alignment:
Q  69 ctgtttggattggcttatttgagctcatctattagcataag 109  Q
    |||||||||||| |||||||||||| || ||||||||||||    
T  11696014 ctgtttggattgacttatttgagcttatttattagcataag 11695974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #89
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 69 - 101
Target Start/End: Complemental strand, 34952354 - 34952322
Alignment:
Q  69 ctgtttggattggcttatttgagctcatctatt 101  Q
    ||||||||||||||||||||||||| |||||||    
T  34952354 ctgtttggattggcttatttgagcttatctatt 34952322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #90
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 169 - 245
Target Start/End: Complemental strand, 43332536 - 43332460
Alignment:
Q  169 ttttcagcttattttcataagttctccaaaatagcttacaaaaacagctaatatcatacacaaaaacaatttagctt 245  Q
    ||||||||||||||| ||||| ||| ||| ||||||||  ||||||||| | | | || |||||| |||||||||||    
T  43332536 ttttcagcttattttaataagctcttcaagatagcttatgaaaacagcttacaacttatacaaaaccaatttagctt 43332460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 91; Significance: 7e-44; HSPs: 57)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 91; E-Value: 7e-44
Query Start/End: Original strand, 68 - 257
Target Start/End: Original strand, 16937800 - 16937989
Alignment:
Q  68 cctgtttggattggcttatttgagctcatctattagcataagtttagtgaaaccgtcatggaa-aacttatgaaaacagcttctgacaattttcacaagc 166  Q
    |||||||||||||||||||||||||| ||||| |||||||||||| |||| |  ||  ||||| |||||||||||||||||| |||||| ||||| ||||    
T  16937800 cctgtttggattggcttatttgagcttatctactagcataagttttgtgagagtgtt-tggaagaacttatgaaaacagcttatgacaaatttcataagc 16937898  T
Q  167 ttttttcagcttattttcataagttctccaaaatagcttacaaaaacagctaatatcatacacaaaaacaatttagcttcattttatcttt 257  Q
    |||||||||||||||||| |||||||||||| ||||| || ||||||| || ||| |||| |||||||||||||| | | |||||||||||    
T  16937899 ttttttcagcttattttcctaagttctccaatatagcgtataaaaacaacttatagcatatacaaaaacaatttaacgttattttatcttt 16937989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 70 - 219
Target Start/End: Original strand, 12857624 - 12857773
Alignment:
Q  70 tgtttggattggcttatttgagctcatctattagcataagtttagtgaaaccgtcatggaaaacttatgaaaacagcttctgacaattttcacaagcttt 169  Q
    |||||||||||| |||||||||||||||||||  | ||||||| ||||||| ||   ||| |||||||||||||| ||| ||||||||||||||| ||||    
T  12857624 tgtttggattggtttatttgagctcatctattgacgtaagttttgtgaaactgttccggagaacttatgaaaacaacttatgacaattttcacaaccttt 12857723  T
Q  170 tttcagcttattttcataagttctccaaaatagcttacaaaaacagctaa 219  Q
    |||||||||||||||||||||||||||| |||||||| |||| |||||||    
T  12857724 tttcagcttattttcataagttctccaatatagcttataaaatcagctaa 12857773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 70 - 271
Target Start/End: Original strand, 12857257 - 12857457
Alignment:
Q  70 tgtttggattggcttatttgagctcatctattagcataagtttagtgaaaccgtcatggaaaacttatgaaaacagcttctgacaattttcacaagcttt 169  Q
    |||||||||||| ||||||||||| |||||||  | ||||||| |||||||  |   ||| |||||||||||||| ||| ||||||||||||||||||||    
T  12857257 tgtttggattggtttatttgagcttatctattgacgtaagttttgtgaaacttttccggagaacttatgaaaacaacttatgacaattttcacaagcttt 12857356  T
Q  170 tttcagcttattttcataagttctccaaaatagcttacaaaaacagctaatatcatacacaaaaacaatttagcttcattttatctttctctataaagat 269  Q
    ||||||||||||||  |||||||||||| |||||||| |||| ||||||||| |||  ||||||| ||   | |||||||||||| || |||||||| ||    
T  12857357 tttcagcttatttttgtaagttctccaatatagcttataaaatcagctaatagcatgtacaaaaataacacaacttcattttatcatt-tctataaaaat 12857455  T
Q  270 ag 271  Q
    ||    
T  12857456 ag 12857457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 66 - 276
Target Start/End: Complemental strand, 10640108 - 10639898
Alignment:
Q  66 ggcctgtttggattggcttatttgagctcatctattagcataagtttagtgaaaccgtcatggaaaacttatgaaaacagcttctgacaattttcacaag 165  Q
    |||||||||||||| ||||||||||| | ||||| |  ||||||||| |||| |  ||   ||| |||||||||||||||||| ||||| |||||| |||    
T  10640108 ggcctgtttggattagcttatttgagtttatctactgacataagttttgtgatattgtttgggagaacttatgaaaacagcttatgacatttttcataag 10640009  T
Q  166 cttttttcagcttattttcataagttctccaaaatagcttacaaaaacagctaatatcatacacaaaaacaatttagcttcattttatctttctctataa 265  Q
    ||||||  ||||||||||||||||||||||||||||| |||   ||||| || ||  |||| ||||||||||||||  || |||||||||||  |||||     
T  10640008 ctttttctagcttattttcataagttctccaaaatagtttatgtaaacaactcatcacatatacaaaaacaatttaatttaattttatcttttgctatag 10639909  T
Q  266 agatagcttat 276  Q
    | |||||||||    
T  10639908 aaatagcttat 10639898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 134 - 300
Target Start/End: Complemental strand, 39105551 - 39105385
Alignment:
Q  134 ttatgaaaacagcttctgacaattttcacaagcttttttcagcttattttcataagttctccaaaatagcttacaaaaacagctaatatcatacacaaaa 233  Q
    ||||||||||||||| ||||| | |||| ||||| |||| |||||||||||||||||||||||| ||||||||  ||||||| | ||| | || || |||    
T  39105551 ttatgaaaacagcttatgacattgttcataagctatttttagcttattttcataagttctccaagatagcttatgaaaacagattatagcttatacgaaa 39105452  T
Q  234 acaatttagcttcattttatctttctctataaagatagcttatgtataagcgcttatcataataagc 300  Q
    |||||||| |||||||| || |||  ||||| | |||||||||  ||||||||||||||| ||||||    
T  39105451 acaatttaacttcatttcatatttagctatagaaatagcttatacataagcgcttatcatgataagc 39105385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 131 - 277
Target Start/End: Original strand, 16457959 - 16458104
Alignment:
Q  131 aacttatgaaaacagcttctgacaattttcacaagcttttttcagcttattttcataagttctccaaaatagcttacaaaaacagctaatatcatacaca 230  Q
    |||||||||||||||||| ||||| |||||| ||||| ||||||| ||||||||| |||||||||||  ||||| | ||||||| || ||| |||| |||    
T  16457959 aacttatgaaaacagcttatgacagttttcataagctcttttcagtttattttcacaagttctccaatttagctcataaaaacaacttatagcatataca 16458058  T
Q  231 aaaacaatttagcttcattttatctttctctataaagatagcttatg 277  Q
    |||||||||||  || |||||||||||  ||||||| ||||||||||    
T  16458059 aaaacaatttaagtt-attttatcttttgctataaaaatagcttatg 16458104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 129 - 266
Target Start/End: Complemental strand, 32009785 - 32009647
Alignment:
Q  129 aaaacttatgaaaacagcttctgacaattttcacaa-gcttttttcagcttattttcataagttctccaaaatagcttacaaaaacagctaatatcatac 227  Q
    |||||||||||||||||||| |||||||||||| || |||||||| | ||| |||||||||||||||||| |||||||| |||||||  | ||| ||||     
T  32009785 aaaacttatgaaaacagcttgtgacaattttcataaagcttttttgaacttgttttcataagttctccaatatagcttataaaaacaatttatagcatat 32009686  T
Q  228 acaaaaacaatttagcttcattttatctttctctataaa 266  Q
    |||| ||||||| | ||||||||||| ||| ||||||||    
T  32009685 acaagaacaattcaacttcattttatgtttttctataaa 32009647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 133 - 266
Target Start/End: Complemental strand, 40426853 - 40426720
Alignment:
Q  133 cttatgaaaacagcttctgacaattttcacaagcttttttcagcttattttcataagttctccaaaatagcttacaaaaacagctaatatcatacacaaa 232  Q
    |||||||||||||||| || || |||||| |||||||||| ||||||||||| |||||||||||| | |||||||  |||||||| | | || | |||||    
T  40426853 cttatgaaaacagcttatgccatttttcataagcttttttaagcttattttcgtaagttctccaagacagcttacggaaacagcttacagcaaatacaaa 40426754  T
Q  233 aacaatttagcttcattttatctttctctataaa 266  Q
    ||||||||||||| |||||||||||  |||||||    
T  40426753 aacaatttagctttattttatcttttgctataaa 40426720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 66 - 206
Target Start/End: Original strand, 7705913 - 7706053
Alignment:
Q  66 ggcctgtttggattggcttatttgagctcatctattagcataagtttagtgaaaccgtcatggaaaacttatgaaaacagcttctgacaattttcacaag 165  Q
    ||||||||||||||| |||||||||||  ||||| |||||||||||| ||||  |  |   ||| |||||||||||||||||| ||||| |||||||  |    
T  7705913 ggcctgtttggattgacttatttgagcatatctactagcataagttttgtgacgctctttgggagaacttatgaaaacagcttatgacagttttcacctg 7706012  T
Q  166 cttttttcagcttattttcataagttctccaaaatagctta 206  Q
    |||||||| ||||||||||| ||||||||||| ||||||||    
T  7706013 cttttttcggcttattttcacaagttctccaatatagctta 7706053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 83 - 277
Target Start/End: Complemental strand, 29925978 - 29925785
Alignment:
Q  83 ttatttgagctcatctattagcataagtttagtgaaaccgtcatggaaaacttatgaaaacagcttctgacaattttcacaagcttttttcagcttattt 182  Q
    ||||||| ||| ||||| ||||| |||||| |||| |||||   ||| |||||||||||||||||| ||||||| ||||   | |||||||| |||||||    
T  29925978 ttatttgggcttatctactagca-aagttttgtgagaccgtttgggagaacttatgaaaacagcttatgacaatgttcatgtgtttttttcaacttattt 29925880  T
Q  183 tcataagttctccaaaatagcttacaaaaacagctaatatcatacacaaaaacaatttagcttcattttatctttctctataaagatagcttatg 277  Q
    ||||||||||||||| ||||||||   ||||| || ||| || | ||| |||||||||| |   |||||||||||  ||||||| ||||||||||    
T  29925879 tcataagttctccaatatagcttatgtaaacaacttatagcacatacagaaacaatttaacgctattttatcttttgctataaaaatagcttatg 29925785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 71 - 212
Target Start/End: Complemental strand, 9107240 - 9107099
Alignment:
Q  71 gtttggattggcttatttgagctcatctattagcataagtttagtgaaaccgtcatggaaaacttatgaaaacagcttctgacaattttcacaagctttt 170  Q
    |||||||||| |||||||||| | ||||| |  ||||||||| |||| |  ||   ||| |||| |||||||||||||  |||||||||||||| |||||    
T  9107240 gtttggattgacttatttgagtttatctagtgacataagttttgtgagaatgtttgggagaactcatgaaaacagcttaggacaattttcacaaactttt 9107141  T
Q  171 ttcagcttattttcataagttctccaaaatagcttacaaaaa 212  Q
    ||| ||| ||||||||||||||||||| ||| ||||||||||    
T  9107140 ttctgctaattttcataagttctccaatataacttacaaaaa 9107099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 69 - 298
Target Start/End: Original strand, 9202666 - 9202895
Alignment:
Q  69 ctgtttggattggcttatttgagctcatctattagcataagtttagtgaaaccgtcatggaaaacttatgaaaacagcttctgacaattttcacaagctt 168  Q
    |||| ||||||| |||||||||||| ||||  | |||||||||| || | ||  |   |||||||| ||| ||||||||| ||||| | |||| |||||     
T  9202666 ctgtatggattgacttatttgagcttatctcctggcataagttttgtaagactatttcggaaaactaatggaaacagcttatgacattgttcataagctg 9202765  T
Q  169 ttttcagcttattttcataagttctccaaaatagcttacaaaaacagctaatatcatacacaaaaacaatttagcttcattttatctttctctataaaga 268  Q
    ||| ||||||||||||||||||||| ||| ||| ||||  ||||||||| ||  | || |  ||||||||||| ||| |||||||||||  ||| | | |    
T  9202766 tttccagcttattttcataagttcttcaagataacttatgaaaacagcttattgcttatatgaaaacaatttaactttattttatcttttgctacagaaa 9202865  T
Q  269 tagcttatgtataagcgcttatcataataa 298  Q
    |||||||| ||||||| |||||||| ||||    
T  9202866 tagcttatatataagcacttatcatgataa 9202895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 70 - 214
Target Start/End: Complemental strand, 43301029 - 43300885
Alignment:
Q  70 tgtttggattggcttatttgagctcatctattagcataagtttagtgaaaccgtcatggaaaacttatgaaaacagcttctgacaattttcacaagcttt 169  Q
    |||||||||||||||||||||||| || || | ||||||||||  ||| || ||   ||| || |||| |||||||| | ||||| |||  | |||| |     
T  43301029 tgtttggattggcttatttgagcttatataatggcataagttttatgagactgttggggagaagttataaaaacagcctatgacattttatataagcatg 43300930  T
Q  170 tttcagcttattttcataagttctccaaaatagcttacaaaaaca 214  Q
    |||||||||||||||||||||||||||| ||||||||||||||||    
T  43300929 tttcagcttattttcataagttctccaagatagcttacaaaaaca 43300885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 138 - 279
Target Start/End: Complemental strand, 35446138 - 35445997
Alignment:
Q  138 gaaaacagcttctgacaattttcacaagcttttttcagcttattttcataagttctccaaaatagcttacaaaaacagctaatatcatacacaaaaacaa 237  Q
    |||||||| || ||||| |||||  |||||||||||||||||||||||||||||||||| ||  |||||  | || || | ||| | || ||||||||||    
T  35446138 gaaaacagtttatgacatttttcgtaagcttttttcagcttattttcataagttctccacaaatgcttatgagaagaggttatagcgtatacaaaaacaa 35446039  T
Q  238 tttagcttcattttatctttctctataaagatagcttatgta 279  Q
    |||| ||| |||||||| ||  ||||||| ||||||||||||    
T  35446038 tttaactttattttatcatttgctataaaaatagcttatgta 35445997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 134 - 214
Target Start/End: Complemental strand, 37954773 - 37954693
Alignment:
Q  134 ttatgaaaacagcttctgacaattttcacaagcttttttcagcttattttcataagttctccaaaatagcttacaaaaaca 214  Q
    ||||||||||||||| ||| ||||||||  ||||||||||| |||||||||||| ||||||||| |||||||| |||||||    
T  37954773 ttatgaaaacagcttatgaaaattttcattagcttttttcaacttattttcatatgttctccaatatagcttataaaaaca 37954693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 131 - 194
Target Start/End: Original strand, 3735138 - 3735201
Alignment:
Q  131 aacttatgaaaacagcttctgacaattttcacaagcttttttcagcttattttcataagttctc 194  Q
    |||| ||||||||||||| |||||||||||| |||||||||||||||||| |||||||||||||    
T  3735138 aactgatgaaaacagcttatgacaattttcaaaagcttttttcagcttatcttcataagttctc 3735201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 69 - 279
Target Start/End: Original strand, 3932594 - 3932813
Alignment:
Q  69 ctgtttggattggcttatttgagctcatctattagcataagtttagtgaaaccgtcatggaaaacttatgaaaacagcttctgacaattttcacaagctt 168  Q
    |||||||||||| || ||||||||| |||||  | |||||| || |||| || ||    ||||||||   |||||||||| ||| |||||||| ||||||    
T  3932594 ctgtttggattgactaatttgagcttatctaacaacataagctttgtgagactgtttgagaaaacttgcaaaaacagcttatgataattttcataagctt 3932693  T
Q  169 ttttcagcttattttcataagttctcca-------aaatagcttacaaaaacagctaatatc--atacacaaaaacaatttagcttcattttatctttct 259  Q
    ||| |||||||||||| |||||||||||         |||||||| ||||| |||| ||| |  ||| |||||||||||| | |||||||||||||||      
T  3932694 tttacagcttattttcgtaagttctccagtctagcttatagcttataaaaagagcttataacatatatacaaaaacaattaaacttcattttatcttttg 3932793  T
Q  260 ctataaagatagcttatgta 279  Q
    ||||||| ||||||||||||    
T  3932794 ctataaaaatagcttatgta 3932813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 65 - 207
Target Start/End: Complemental strand, 42100467 - 42100325
Alignment:
Q  65 tggcctgtttggattggcttatttgagctcatctattagcataagtttagtgaaaccgtcatggaaaacttatgaaaacagcttctgacaattttcacaa 164  Q
    |||||||||||||| |||||||||||||| ||||||| |||||| ||| |||  || ||    || ||||| |||||| ||||| |||||   |||| ||    
T  42100467 tggcctgtttggatgggcttatttgagcttatctattggcataaattttgtgtgactgtgtgagagaacttgtgaaaatagcttatgacatagttcaaaa 42100368  T
Q  165 gcttttttcagcttattttcataagttctccaaaatagcttac 207  Q
    | | |||||| ||||||||||||||||||| ||||||||||||    
T  42100367 ggtgttttcatcttattttcataagttctcaaaaatagcttac 42100325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 169 - 298
Target Start/End: Complemental strand, 12425623 - 12425494
Alignment:
Q  169 ttttcagcttattttcataagttctccaaaatagcttacaaaaacagctaatatcatacacaaaaacaatttagcttcattttatctttctctataaaga 268  Q
    |||||| |||||||||||||||||||||| |||||||   ||||||||| ||| | || || ||||||||||| ||| |||||||||||  ||||| | |    
T  12425623 ttttcaacttattttcataagttctccaagatagcttgtgaaaacagcttatagcttatacgaaaacaatttaactttattttatcttttactatataaa 12425524  T
Q  269 tagcttatgtataagcgcttatcataataa 298  Q
    ||| ||||  ||||||| ||||||| ||||    
T  12425523 tagtttatacataagcgtttatcatgataa 12425494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 158 - 293
Target Start/End: Original strand, 4014431 - 4014566
Alignment:
Q  158 ttcacaagcttttttcagcttattttcataagttctccaaaatagcttacaaaaacagctaat-atcatacacaaaaacaatttagcttcattttatctt 256  Q
    |||| ||||| ||||||||||||||||||||||||||||| ||||||||  ||||||||| || ||  | | |||||||||| || ||| ||||||||||    
T  4014431 ttcataagctgttttcagcttattttcataagttctccaagatagcttatgaaaacagcttatcatttttc-caaaaacaatctaactttattttatctt 4014529  T
Q  257 tctctataaagatagcttatgtataagcgcttatcat 293  Q
    |  ||||| | |||||||||  ||| |||||||||||    
T  4014530 ttgctatagaaatagcttatacataggcgcttatcat 4014566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 66 - 250
Target Start/End: Original strand, 40438869 - 40439052
Alignment:
Q  66 ggcctgtttggattggcttatttgagctcatctattagcataagtttagtgaaaccgtcatggaaaacttatgaaaacagcttctgacaattttcacaag 165  Q
    ||||| |||||||||||||||||| ||||||||| | |||||||||| || ||  |||   ||| ||| | |||||||| ||| ||||| |||||| |||    
T  40438869 ggcctctttggattggcttatttgggctcatctactggcataagttttgtaaagacgtttgggagaacatttgaaaacaacttgtgacatttttcataag 40438968  T
Q  166 cttttttcagcttattttcataagttctccaaaatagcttacaaaaacagctaatatcatacacaaaaacaatttagcttcattt 250  Q
    | |||||||  ||||||||||| ||||||||| |||| | |  ||||||||| ||| | |||| |||| ||||||| ||| ||||    
T  40438969 c-tttttcaatttattttcatatgttctccaagataggtcatgaaaacagcttataacctacagaaaatcaatttaactttattt 40439052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 169 - 257
Target Start/End: Complemental strand, 42582964 - 42582876
Alignment:
Q  169 ttttcagcttattttcataagttctccaaaatagcttacaaaaacagctaatatcatacacaaaaacaatttagcttcattttatcttt 257  Q
    |||| |||||||||||||||||||||||| ||||||||||||||||||| ||| | || || || |||||||| ||| |||| ||||||    
T  42582964 ttttgagcttattttcataagttctccaatatagcttacaaaaacagcttataccttaaacgaacacaatttaactttatttcatcttt 42582876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 66 - 241
Target Start/End: Original strand, 25461563 - 25461737
Alignment:
Q  66 ggcctgtttggattggcttatttgagctcatctattagcataagtttagtgaaaccgtcatggaaaacttatgaaaacagcttctgacaattttcacaag 165  Q
    |||| ||||||||||||||||||||||| |||||| ||||||||||| |||| || ||   | | || |  || ||| ||||| || ||||||||| |||    
T  25461563 ggcccgtttggattggcttatttgagcttatctatcagcataagttt-gtgatactgtttggtagaattcttggaaatagcttatggcaattttcataag 25461661  T
Q  166 cttttttcagcttattttcataagttctccaaaatagcttacaaaaacagctaatatcatacacaaaaacaattta 241  Q
    ||||  ||| |||||||| ||||||||||||| | |||||| ||||||| || ||| |||| || ||| |||||||    
T  25461662 ctttgatcaacttattttaataagttctccaatagagcttataaaaacaacttataacatatactaaaccaattta 25461737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 126 - 206
Target Start/End: Original strand, 42500217 - 42500296
Alignment:
Q  126 tggaaaacttatgaaaacagcttctgacaattttcacaagcttttttcagcttattttcataagttctccaaaatagctta 206  Q
    |||| |||||||| ||||| |||  ||||||||||| ||||||||| || |||||||||||||||||||||| ||||||||    
T  42500217 tggagaacttatggaaacaacttacgacaattttcataagcttttt-caacttattttcataagttctccaatatagctta 42500296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 131 - 290
Target Start/End: Complemental strand, 706553 - 706394
Alignment:
Q  131 aacttatgaaaacagcttctgacaattttcacaagcttttttcagcttattttcataagttctccaaaatagcttacaaaaacagctaatatcatacaca 230  Q
    |||||||||||| || || ||||| | |||| ||||| ||||||||||||||| ||| | || |||| ||| |||| |||||| | | ||||| || |||    
T  706553 aacttatgaaaatagtttatgacattgttcataagctattttcagcttattttgataggatcaccaatataacttataaaaactgattatatcttaaaca 706454  T
Q  231 aaaacaatttagcttcattttatctttctctataaagatagcttatgtataagcgcttat 290  Q
    | || |||||| ||  |||||||||||  ||||| | |||||||||  ||||||||||||    
T  706453 agaataatttaactatattttatcttttactatagaaatagcttatacataagcgcttat 706394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 69 - 300
Target Start/End: Original strand, 1464938 - 1465168
Alignment:
Q  69 ctgtttggattggcttatttgagctcatctattagcataagtttagtgaaaccgtcatggaaaacttatgaaaacagcttctgacaattttcacaagctt 168  Q
    ||||||| |||| |||||||||||| | ||  |||||||||||  | || || ||   ||| |||||||||||||||||| || || |  ||| ||| |     
T  1464938 ctgtttgaattgacttatttgagcttagcttctagcataagttctgcgagactgttcgggagaacttatgaaaacagcttatggcattgctcataagttg 1465037  T
Q  169 ttttcagcttattttcataagttctccaaaatagcttacaaaaacagctaatatcatacacaaaaacaatttagcttcattttatctttctctataaaga 268  Q
    ||||||||||||||||| |||| |||||| ||||||||  |||| | || ||| | ||||||||| | ||||| ||| |||||||| |   ||||| | |    
T  1465038 ttttcagcttattttcacaagtcctccaagatagctta-taaaataacttatagcttacacaaaagcgatttaactttattttatcctatgctatagaaa 1465136  T
Q  269 tagcttatgtataagcgcttatcataataagc 300  Q
    ||||||||  ||||||||||||| | ||||||    
T  1465137 tagcttatacataagcgcttatcttgataagc 1465168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 143 - 238
Target Start/End: Complemental strand, 25461169 - 25461074
Alignment:
Q  143 cagcttctgacaattttcacaagcttttttcagcttattttcataagttctccaaaatagcttacaaaaacagctaatatcatacacaaaaacaat 238  Q
    |||||| || ||||||||| || | ||||||||||||||||||| |||||||||| | ||||||  |||||| || ||| |||| |||||||||||    
T  25461169 cagcttatggcaattttcataaacgtttttcagcttattttcatcagttctccaatagagcttatgaaaacaacttataacatatacaaaaacaat 25461074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 133 - 206
Target Start/End: Complemental strand, 7985057 - 7984984
Alignment:
Q  133 cttatgaaaacagcttctgacaattttcacaagcttttttcagcttattttcataagttctccaaaatagctta 206  Q
    |||| ||||||||||| ||||  | |||| ||||| |||||||||||||||||||| |||||||| ||||||||    
T  7985057 cttaagaaaacagcttgtgacgttgttcataagctgttttcagcttattttcataaattctccaagatagctta 7984984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 131 - 288
Target Start/End: Complemental strand, 32022161 - 32022004
Alignment:
Q  131 aacttatgaaaacagcttctgacaattttcacaagcttttttcagcttattttcataagttctccaaaatagcttacaaaaacagctaatatcatacaca 230  Q
    |||||| ||||||| |||  |||||||||||||||||||||||||| |||||||  ||||| |  || |||| |||| |||| |  | ||| |||| |||    
T  32022161 aacttacgaaaacatcttaagacaattttcacaagcttttttcagcctattttctcaagttatttaatatagtttactaaaataatttatagcatataca 32022062  T
Q  231 aaaacaatttagcttcattttatctttctctataaagatagcttatgtataagcgctt 288  Q
    |||  || ||| ||| | |||||||||  |||||||  ||||||||| ||||||||||    
T  32022061 aaagtaaattaactttaatttatcttttgctataaaactagcttatgcataagcgctt 32022004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 66 - 257
Target Start/End: Original strand, 34102228 - 34102420
Alignment:
Q  66 ggcctgtttggattggcttatttgagctcatctattagcataagtttagtgaaaccgtcatggaaaacttatgaaaacagcttctgacaattttcacaag 165  Q
    |||||||||||| |  |||||||||||| | ||||| |||||||||| |||| || ||   ||  || ||||||||| |||||  ||||||||||| ||     
T  34102228 ggcctgtttggaatcacttatttgagcttaactattggcataagttttgtgacactgtttgggggaatttatgaaaatagcttaagacaattttcataac 34102327  T
Q  166 cttttttcag-cttattttcataagttctccaaaatagcttacaaaaacagctaatatcatacacaaaaacaatttagcttcattttatcttt 257  Q
     |||||   | ||| ||||||| |||||||||| || ||||| ||||||| || ||| |||| |||||||||| ||| | | |||||||||||    
T  34102328 ttttttattgacttgttttcatgagttctccaacatggcttataaaaacaacttatagcatatacaaaaacaaattaacattattttatcttt 34102420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 137 - 225
Target Start/End: Complemental strand, 39477967 - 39477879
Alignment:
Q  137 tgaaaacagcttctgacaattttcacaagcttttttcagcttattttcataagttctccaaaatagcttacaaaaacagctaatatcat 225  Q
    |||| ||||||  |||||||||||| ||| ||||||| ||||||||||| |||||||| || |||||||| ||||| | || |||||||    
T  39477967 tgaacacagctgatgacaattttcaaaagtttttttctgcttattttcagaagttctctaacatagcttataaaaataacttatatcat 39477879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 126 - 196
Target Start/End: Original strand, 36797070 - 36797141
Alignment:
Q  126 tggaaaacttatgaaaacagctt-ctgacaattttcacaagcttttttcagcttattttcataagttctcca 196  Q
    |||| ||||||| |||||| ||| ||||||||||||| ||||||||||| |||||||||  |||||||||||    
T  36797070 tggagaacttataaaaacaactttctgacaattttcataagcttttttcggcttattttagtaagttctcca 36797141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 174 - 257
Target Start/End: Original strand, 41981888 - 41981971
Alignment:
Q  174 agcttattttcataagttctccaaaatagcttacaaaaacagctaatatcatacacaaaaacaatttagcttcattttatcttt 257  Q
    ||||||||||| ||||||||| ||||||| |||  ||||||||| |||   || ||||||||| |||||||| |||||||||||    
T  41981888 agcttattttcgtaagttctcaaaaatagtttatgaaaacagcttatagtttatacaaaaacattttagctttattttatcttt 41981971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 169 - 251
Target Start/End: Original strand, 41957469 - 41957551
Alignment:
Q  169 ttttcagcttattttcataagttctccaaaatagcttacaaaaacagctaatatcatacacaaaaacaatttagcttcatttt 251  Q
    |||||| ||||||||||||||||||| |  ||||||||  ||||||||| ||| | ||||  ||||||||||| |||||||||    
T  41957469 ttttcatcttattttcataagttctcaaggatagcttatgaaaacagcttataacttacatgaaaacaatttaacttcatttt 41957551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 170 - 215
Target Start/End: Complemental strand, 7319457 - 7319412
Alignment:
Q  170 tttcagcttattttcataagttctccaaaatagcttacaaaaacag 215  Q
    |||||||||||||| ||||||||||||| ||||||||| |||||||    
T  7319457 tttcagcttatttttataagttctccaagatagcttacgaaaacag 7319412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 169 - 242
Target Start/End: Original strand, 35445861 - 35445934
Alignment:
Q  169 ttttcagcttattttcataagttctccaaaatagcttacaaaaacagctaatatcatacacaaaaacaatttag 242  Q
    |||||| ||||||||||||| |||||||| ||||||||||| |||| || ||| | || || ||||||||||||    
T  35445861 ttttcaccttattttcataaattctccaagatagcttacaagaacaccttataacttatacgaaaacaatttag 35445934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 169 - 278
Target Start/End: Complemental strand, 39594859 - 39594751
Alignment:
Q  169 ttttcagcttattttcataagttctccaaaatagcttacaaaaacagctaatatcatacacaaaaacaatttagcttcattttatctttctctataaaga 268  Q
    ||||||||||||||||||||||||  ||| ||| ||||  ||||||||| | | | ||  | ||||||||||| ||| ||||||||||| |||||| | |    
T  39594859 ttttcagcttattttcataagttcaacaagatatcttatgaaaacagcttacaacttatgcgaaaacaattta-ctttattttatctttttctatagaaa 39594761  T
Q  269 tagcttatgt 278  Q
    ||||||||||    
T  39594760 tagcttatgt 39594751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 77 - 168
Target Start/End: Complemental strand, 3520721 - 3520630
Alignment:
Q  77 attggcttatttgagctcatctattagcataagtttagtgaaaccgtcatggaaaacttatgaaaacagcttctgacaattttcacaagctt 168  Q
    ||||||||||||||||||||||| ||| |||||||  |||| || ||   ||| |||||||||||||| ||| ||||  |||||| ||||||    
T  3520721 attggcttatttgagctcatctactagtataagttgtgtgagactgtttgggagaacttatgaaaacatcttatgacttttttcataagctt 3520630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 66 - 180
Target Start/End: Complemental strand, 6521233 - 6521118
Alignment:
Q  66 ggcctgtttggattggcttatttgagctcatctattagcataagtttagtgaaaccgtcatggaaaacttatgaaaacag-cttctgacaattttcacaa 164  Q
    ||||||||||||||| |||||| ||||| | ||| |  |||| |||| |||| |  ||   ||| ||||||||||||| | ||| |||||||||||||||    
T  6521233 ggcctgtttggattgacttattagagctgaactactgacatatgttttgtgagattgtttgggagaacttatgaaaacggacttatgacaattttcacaa 6521134  T
Q  165 gcttttttcagcttat 180  Q
    ||||||||| ||||||    
T  6521133 gcttttttcggcttat 6521118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 172 - 215
Target Start/End: Original strand, 7319029 - 7319072
Alignment:
Q  172 tcagcttattttcataagttctccaaaatagcttacaaaaacag 215  Q
    |||||||||||||||||||||||||| ||||||||  |||||||    
T  7319029 tcagcttattttcataagttctccaagatagcttatgaaaacag 7319072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 156 - 211
Target Start/End: Original strand, 13697764 - 13697819
Alignment:
Q  156 ttttcacaagcttttttcagcttattttcataagttctccaaaatagcttacaaaa 211  Q
    |||||| ||| |||||||| ||||||||||||| |||||||| |||||||| ||||    
T  13697764 ttttcataagtttttttcaacttattttcataacttctccaacatagcttataaaa 13697819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 163 - 217
Target Start/End: Original strand, 29845446 - 29845501
Alignment:
Q  163 aagcttttttcagcttattttcataagttctccaaaatagcttac-aaaaacagct 217  Q
    ||||| |||||||||||| ||||||| |||||||| ||||||||| ||||||||||    
T  29845446 aagctgttttcagcttatattcataacttctccaagatagcttacgaaaaacagct 29845501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 70 - 108
Target Start/End: Complemental strand, 9174967 - 9174929
Alignment:
Q  70 tgtttggattggcttatttgagctcatctattagcataa 108  Q
    ||||||||||| |||||||||||| ||||||||||||||    
T  9174967 tgtttggattgacttatttgagcttatctattagcataa 9174929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 154 - 254
Target Start/End: Original strand, 24030404 - 24030505
Alignment:
Q  154 aattttcacaagcttttttcagcttattttcataagttctccaaaatagcttacaaaaacagctaatatcata-cacaaaaacaatttagcttcatttta 252  Q
    ||||| || |||| ||||| |||||||||||||||||| || || |||||||| ||||||| || ||| |||| |  ||||| |||||| ||| ||||||    
T  24030404 aatttccaaaagcgttttttagcttattttcataagttatctaatatagcttataaaaacaacttataacatatccaaaaaataatttaactttatttta 24030503  T
Q  253 tc 254  Q
    ||    
T  24030504 tc 24030505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 134 - 195
Target Start/End: Original strand, 32859703 - 32859763
Alignment:
Q  134 ttatgaaaacagcttctgacaattttcacaagcttttttcagcttattttcataagttctcc 195  Q
    ||||||||||| |||  |||| |||||| |||||||| ||||||||||||||||| ||||||    
T  32859703 ttatgaaaacaacttacgacatttttcataagctttt-tcagcttattttcataacttctcc 32859763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 134 - 195
Target Start/End: Original strand, 32861875 - 32861935
Alignment:
Q  134 ttatgaaaacagcttctgacaattttcacaagcttttttcagcttattttcataagttctcc 195  Q
    ||||||||||| |||  |||| |||||| |||||||| ||||||||||||||||| ||||||    
T  32861875 ttatgaaaacaacttacgacatttttcataagctttt-tcagcttattttcataacttctcc 32861935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 144 - 197
Target Start/End: Complemental strand, 34160808 - 34160755
Alignment:
Q  144 agcttctgacaattttcacaagcttttttcagcttattttcataagttctccaa 197  Q
    ||||| ||||| | |||| || || |||||||||||||||||||||||||||||    
T  34160808 agcttgtgacactgttcataaactgttttcagcttattttcataagttctccaa 34160755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 66 - 99
Target Start/End: Original strand, 41535019 - 41535052
Alignment:
Q  66 ggcctgtttggattggcttatttgagctcatcta 99  Q
    |||||||||| |||||||||||||||||||||||    
T  41535019 ggcctgtttgaattggcttatttgagctcatcta 41535052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 224 - 277
Target Start/End: Original strand, 42500298 - 42500351
Alignment:
Q  224 atacacaaaaacaatttagcttcattttatctttctctataaagatagcttatg 277  Q
    |||||||||||||||||| ||| |||||||||||   |||||| ||||||||||    
T  42500298 atacacaaaaacaatttaactttattttatcttttgatataaaaatagcttatg 42500351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 131 - 228
Target Start/End: Complemental strand, 42646757 - 42646660
Alignment:
Q  131 aacttatgaaaacagcttctgacaattttcacaagcttttttcagcttattttcataagttctccaaaatagcttacaaaaacagctaatatcataca 228  Q
    |||||||||||| || ||  |||| |||||| |||||||||| || |||||| ||||||||||| || ||||| ||| | || |||| ||| ||||||    
T  42646757 aacttatgaaaaaagtttaggacatttttcataagctttttttagtttatttccataagttctcgaagatagcctacgataaaagcttataacataca 42646660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 69 - 148
Target Start/End: Original strand, 1773024 - 1773101
Alignment:
Q  69 ctgtttggattggcttatttgagctcatctattagcataagtttagtgaaaccgtcatggaaaacttatgaaaacagctt 148  Q
    |||||||||||||||||||| |||| ||||| |  ||||||||| |||| || ||   ||| ||||||||||||||||||    
T  1773024 ctgtttggattggcttattttagcttatctacttccataagttttgtgagactgt--gggagaacttatgaaaacagctt 1773101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 129 - 217
Target Start/End: Complemental strand, 3977399 - 3977312
Alignment:
Q  129 aaaacttatgaaaacagcttctgacaattttcacaagcttttttcagcttattttcataagttctccaaaatagcttacaaaaacagct 217  Q
    |||||||||||||||||||| ||||| | |||   |||| | |||||||||||||||||| ||||||| || | ||||  |||||||||    
T  3977399 aaaacttatgaaaacagcttatgaca-tgttccttagctgtcttcagcttattttcataatttctccacaacaacttatgaaaacagct 3977312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 161 - 217
Target Start/End: Complemental strand, 6593359 - 6593303
Alignment:
Q  161 acaagcttttttcagcttattttcataagttctccaaaatagcttacaaaaacagct 217  Q
    ||||||| ||||||||||||||||||||| |||| ||  |||||||  |||||||||    
T  6593359 acaagctcttttcagcttattttcataagctctctaaggtagcttatcaaaacagct 6593303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 131 - 191
Target Start/End: Complemental strand, 8334661 - 8334601
Alignment:
Q  131 aacttatgaaaacagcttctgacaattttcacaagcttttttcagcttattttcataagtt 191  Q
    |||||||||||| ||||| |||||  ||||| ||  | |||||||||||||||||||||||    
T  8334661 aacttatgaaaatagcttatgacatatttcataaattgttttcagcttattttcataagtt 8334601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 169 - 257
Target Start/End: Original strand, 10272449 - 10272537
Alignment:
Q  169 ttttcagcttattttcataagttctccaaaatagcttacaaaaacagctaatatcatacacaaaaacaatttagcttcattttatcttt 257  Q
    ||||||||||||||||||||  ||||||| || |||||  |||||| || ||| | || || ||||||||||  ||| |||||||||||    
T  10272449 ttttcagcttattttcataaactctccaagatggcttatgaaaacaacttatagcttatacgaaaacaatttgacttaattttatcttt 10272537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 158 - 206
Target Start/End: Complemental strand, 12521591 - 12521543
Alignment:
Q  158 ttcacaagcttttttcagcttattttcataagttctccaaaatagctta 206  Q
    |||| ||||| |||||||||||||| |||||| ||| ||||||||||||    
T  12521591 ttcataagctgttttcagcttatttccataagctcttcaaaatagctta 12521543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 150 - 194
Target Start/End: Original strand, 34669729 - 34669773
Alignment:
Q  150 tgacaattttcacaagcttttttcagcttattttcataagttctc 194  Q
    ||||| |||||| ||||||||||||||||| ||||| ||||||||    
T  34669729 tgacatttttcataagcttttttcagcttaatttcagaagttctc 34669773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 88; Significance: 4e-42; HSPs: 75)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 133 - 256
Target Start/End: Complemental strand, 30443981 - 30443858
Alignment:
Q  133 cttatgaaaacagcttctgacaattttcacaagcttttttcagcttattttcataagttctccaaaatagcttacaaaaacagctaatatcatacacaaa 232  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||| ||| |||||||||| ||| |||| |||||    
T  30443981 cttatgaaaacagcttatgacaattttcacaagcttttttcagcttattttcataagttctccaatatagtttataaaaacagcttatagcatatacaaa 30443882  T
Q  233 aacaatttagcttcattttatctt 256  Q
    | ||||||| ||||||||||||||    
T  30443881 agcaatttaacttcattttatctt 30443858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 70 - 279
Target Start/End: Complemental strand, 20880627 - 20880419
Alignment:
Q  70 tgtttggattggcttatttgagctcatctattagcataagtttagtgaaaccgtcatggaaaacttatgaaaacagcttctgacaattttcacaagcttt 169  Q
    |||||||||||||||||||||||| ||||| | ||||||||||  | | ||  |   ||| ||| |||||||||||||| |||||||||||| |||||||    
T  20880627 tgtttggattggcttatttgagcttatctacttgcataagtttccttagactatttgggagaacctatgaaaacagcttatgacaattttcataagcttt 20880528  T
Q  170 tttcagcttattttcataagttctccaaaatagcttacaaaaacagctaatatcatacacaaaaacaatttagcttcattttatctttctctataaagat 269  Q
    ||| |||||||||||||||||||||||| |||||||  |||||||| | ||| |||| |||||||||||||| |||  ||||||| ||  ||||||| ||    
T  20880527 tttgagcttattttcataagttctccaatatagcttttaaaaacagtttatagcatatacaaaaacaatttaactt-gttttatcatttgctataaaaat 20880429  T
Q  270 agcttatgta 279  Q
    ||||||||||    
T  20880428 agcttatgta 20880419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 69 - 241
Target Start/End: Complemental strand, 39980881 - 39980709
Alignment:
Q  69 ctgtttggattggcttatttgagctcatctattagcataagtttagtgaaaccgtcatggaaaacttatgaaaacagcttctgacaattttcacaagctt 168  Q
    |||||||||||||||| |||||||| ||||| |||||||||||| |||| || ||    || |||||||||||||||||| ||||   ||||| ||||||    
T  39980881 ctgtttggattggcttgtttgagcttatctactagcataagttttgtgagactgtttaagagaacttatgaaaacagcttatgactggtttcataagctt 39980782  T
Q  169 ttttcagcttattttcataagttctccaaaatagcttacaaaaacagctaatatcatacacaaaaacaattta 241  Q
    |||||| |||||||||||||||||||||| |||||||| ||||||| || ||| |||   |||||||||||||    
T  39980781 ttttcaacttattttcataagttctccaatatagcttataaaaacaacttatagcatgttcaaaaacaattta 39980709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 72 - 251
Target Start/End: Complemental strand, 21367816 - 21367637
Alignment:
Q  72 tttggattggcttatttgagctcatctattagcataagtttagtgaaaccgtcatggaaaacttatgaaaacagcttctgacaattttcacaagcttttt 171  Q
    |||||||||||||||||||| | |||||  ||||||||||| |||  || ||   ||| |||||||||||||||||| ||||| | |||||||||| |||    
T  21367816 tttggattggcttatttgagattatctaccagcataagttttgtgggactgtttgggagaacttatgaaaacagcttatgacattgttcacaagctgttt 21367717  T
Q  172 tcagcttattttcataagttctccaaaatagcttacaaaaacagctaatatcatacacaaaaacaatttagcttcatttt 251  Q
    |||||||||||||||||||||||||| ||||||||  |||||| || |||   || || ||||||||||| ||| |||||    
T  21367716 tcagcttattttcataagttctccaagatagcttatgaaaacaacttatacattatacgaaaacaatttaactttatttt 21367637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 131 - 275
Target Start/End: Original strand, 36631031 - 36631175
Alignment:
Q  131 aacttatgaaaacagcttctgacaattttcacaagcttttttcagcttattttcataagttctccaaaatagcttacaaaaacagctaatatcatacaca 230  Q
    ||||||||||| |||||| |||| ||||||| ||||||||||| ||||||||||||||||||||||| |||||| | ||||||| || ||| |||  |||    
T  36631031 aacttatgaaaccagcttatgacgattttcaaaagcttttttctgcttattttcataagttctccaatatagctcataaaaacaacttatagcatgtaca 36631130  T
Q  231 aaaacaatttagcttcattttatctttctctataaagatagctta 275  Q
    ||||||||||| ||| | |||||| ||  ||||| | ||||||||    
T  36631131 aaaacaatttaactttactttatcctttactatagaaatagctta 36631175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 71 - 214
Target Start/End: Original strand, 24085258 - 24085401
Alignment:
Q  71 gtttggattggcttatttgagctcatctattagcataagtttagtgaaaccgtcatggaaaacttatgaaaacagcttctgacaattttcacaagctttt 170  Q
    ||||||||||||||||||||||| |||||   |||||||||| |||| || |   |||| |||||||||||||||||| ||  | | |||| | ||| ||    
T  24085258 gtttggattggcttatttgagcttatctaccggcataagttttgtgagactggtttggagaacttatgaaaacagcttatggtactgttcatacgctgtt 24085357  T
Q  171 ttcagcttattttcataagttctccaaaatagcttacaaaaaca 214  Q
    ||||||||||||||| ||||||||||| ||||||||||||||||    
T  24085358 ttcagcttattttcacaagttctccaagatagcttacaaaaaca 24085401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 74 - 188
Target Start/End: Original strand, 31365111 - 31365225
Alignment:
Q  74 tggattggcttatttgagctcatctattagcataagtttagtgaaaccgtcatggaaaacttatgaaaacagcttctgacaattttcacaagcttttttc 173  Q
    |||||||||||||||||||| ||||||| |||||||||| |||| || ||   ||| ||||||||||| |||||| |||||||||||| |||||||||||    
T  31365111 tggattggcttatttgagcttatctattggcataagttttgtgagactgtttgggagaacttatgaaagcagcttatgacaattttcataagcttttttc 31365210  T
Q  174 agcttattttcataa 188  Q
    | || ||||||||||    
T  31365211 aactcattttcataa 31365225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 150 - 257
Target Start/End: Complemental strand, 36189636 - 36189530
Alignment:
Q  150 tgacaattttcacaagcttttttcagcttattttcataagttctccaaaatagcttacaaaaacagctaatatcatacacaaaaacaatttagcttcatt 249  Q
    ||||||||||||||||||||| |  | ||||||||||||||||||||| ||| |||| ||||| |||| |||||||| |||||||||||||| ||| |||    
T  36189636 tgacaattttcacaagcttttatg-gtttattttcataagttctccaatatatcttataaaaatagcttatatcatatacaaaaacaatttaactttatt 36189538  T
Q  250 ttatcttt 257  Q
    ||||||||    
T  36189537 ttatcttt 36189530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 80 - 241
Target Start/End: Original strand, 46778120 - 46778280
Alignment:
Q  80 ggcttatttgagctcatctattagcataagtttagtgaaaccgtcatggaaaacttatgaaaacagcttctgacaattttcacaagcttttttcagctta 179  Q
    |||||||||||||| || || | |||||| ||| ||||||||||   ||| |||||||||||||| ||| ||||| |||||| ||| ||| |||||||||    
T  46778120 ggcttatttgagcttatttagtggcataaattttgtgaaaccgtttgggagaacttatgaaaacaacttatgacatttttcataagttttgttcagctta 46778219  T
Q  180 ttttcataagttctccaaaatagcttacaaaaacagctaatatcatacacaaaaacaattta 241  Q
     ||||||||||| ||||| |||| |||  ||||||| | ||| |||| ||||||||||||||    
T  46778220 -tttcataagttgtccaagatagtttatgaaaacagtttatagcataaacaaaaacaattta 46778280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 71 - 279
Target Start/End: Complemental strand, 584196 - 583988
Alignment:
Q  71 gtttggattggcttatttgagctcatctattagcataagtttagtgaaaccgtcatggaaaacttatgaaaacagcttctgacaattttcacaagctttt 170  Q
    |||||||||| |||||||||||| ||||| |||||||||||  |||| || ||  |||| || |||||||||||||||  | || |||||| | | || |    
T  584196 gtttggattgacttatttgagcttatctactagcataagttctgtgagactgttttggagaatttatgaaaacagcttacggcagttttcataggtttct 584097  T
Q  171 ttcagcttattttcataagttctccaaaatagcttacaaaaacagctaatatcatacacaaaaacaatttagcttcattttatctttctctataaagata 270  Q
    || |||||| ||||||||||||| ||| ||||||||  |||  | || ||| |||  |||||||||||||| ||| |||||||| || |||||| | |||    
T  584096 ttaagcttaatttcataagttcttcaagatagcttatgaaactaacttatagcatgaacaaaaacaatttaactttattttatcattttctatagaaata 583997  T
Q  271 gcttatgta 279  Q
     ||||||||    
T  583996 acttatgta 583988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 150 - 278
Target Start/End: Original strand, 35959455 - 35959583
Alignment:
Q  150 tgacaattttcacaagcttttttcagcttattttcataagttctccaaaatagcttacaaaaacagctaatatcatacacaaaaacaatttagcttcatt 249  Q
    |||||||||||| ||||||||||||||||||||||| || ||||| || |||||||| | ||||| || | | |||| ||||||| |||||| ||| |||    
T  35959455 tgacaattttcaaaagcttttttcagcttattttcaaaaattctctaatatagcttatagaaacaacttacagcatatacaaaaataatttaactttatt 35959554  T
Q  250 ttatctttctctataaagatagcttatgt 278  Q
    ||||| || |||||| | |||||||||||    
T  35959555 ttatccttttctatagaaatagcttatgt 35959583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 127 - 214
Target Start/End: Complemental strand, 902018 - 901931
Alignment:
Q  127 ggaaaacttatgaaaacagcttctgacaattttcacaagcttttttcagcttattttcataagttctccaaaatagcttacaaaaaca 214  Q
    |||||||||||||||||||||  | ||| ||| || |||||||||||| |||||||||||||||||||||| |||||||| |||||||    
T  902018 ggaaaacttatgaaaacagctaataacattttccataagcttttttcaacttattttcataagttctccaatatagcttataaaaaca 901931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 135 - 300
Target Start/End: Original strand, 402526 - 402690
Alignment:
Q  135 tatgaaaacagcttctgacaattttcacaagcttttttcagcttattttcataagttctccaaaatagcttacaaaaacagctaatatcatacacaaaaa 234  Q
    |||||||||||||| ||||| | |||| ||||| ||||||||||| ||||| ||||||| ||| |||| ||| |||||||||| ||| | || || ||||    
T  402526 tatgaaaacagcttatgacattgttcataagctgttttcagcttaatttcacaagttcttcaagatagattataaaaacagcttataacttatacgaaaa 402625  T
Q  235 caatttagcttcattttatctttctctataaagatagcttatgtataagcgcttatcataataagc 300  Q
    |||||||  || |  |||||||| |||||| | |||||||||  |||||| |||||||| ||||||    
T  402626 caatttaaattta-attatctttttctatagaaatagcttatacataagcccttatcatgataagc 402690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 166 - 279
Target Start/End: Original strand, 3845577 - 3845690
Alignment:
Q  166 cttttttcagcttattttcataagttctccaaaatagcttacaaaaacagctaatatcatacacaaaaacaatttagcttcattttatctttctctataa 265  Q
    |||||||||||||||||||||||||||||||| ||| ||||  ||||||||   || |||| | ||||||| || | ||| ||||||||||||||||||     
T  3845577 cttttttcagcttattttcataagttctccaagataacttatgaaaacagcatgtagcatatagaaaaacatttcaacttaattttatctttctctatag 3845676  T
Q  266 agatagcttatgta 279  Q
    | ||||||||||||    
T  3845677 aaatagcttatgta 3845690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 131 - 257
Target Start/End: Complemental strand, 20170613 - 20170487
Alignment:
Q  131 aacttatgaaaacagcttctgacaattttcacaagcttttttcagcttattttcataagttctccaaaatagcttacaaaaacagctaatatcatacaca 230  Q
    |||||| ||||||||||  ||  | |||||| |||||||||||| ||||||||||| ||||||| |||||| |||  ||||||| || ||| |||| |||    
T  20170613 aacttaagaaaacagctaatgggatttttcataagcttttttcaacttattttcattagttctcaaaaataacttgtaaaaacaacttatagcatataca 20170514  T
Q  231 aaaacaatttagcttcattttatcttt 257  Q
    ||||||||||| | | |||||||||||    
T  20170513 aaaacaatttaacattattttatcttt 20170487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 131 - 279
Target Start/End: Original strand, 24684802 - 24684951
Alignment:
Q  131 aacttatgaaaacagcttctgacaattttcacaagcttttttcag-cttattttcataagttctccaaaatagcttacaaaaacagctaatatcatacac 229  Q
    |||||||||||||| ||| ||||||||| |||||| ||||||  | |||||||||  ||| ||||| | || ||||| |||| || || ||| |||| ||    
T  24684802 aacttatgaaaacaacttatgacaatttgcacaagatttttttcgtcttattttctcaagatctccgatattgcttataaaagcaacttatagcatatac 24684901  T
Q  230 aaaaacaatttagcttcattttatctttctctataaagatagcttatgta 279  Q
    |||||||||| |  || ||||||||||| |||||||| ||||||||||||    
T  24684902 aaaaacaattaaaatttattttatctttttctataaaaatagcttatgta 24684951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 131 - 278
Target Start/End: Complemental strand, 37689319 - 37689176
Alignment:
Q  131 aacttatgaaaacagcttctgacaattttcacaagcttttttcagcttattttcataagttctccaaaatagcttacaaaaacagctaatatcatacaca 230  Q
    |||||| ||||||||||| |||||||||||| |||||||||||| ||||||||||||||| |||  | ||| || | ||||||| |  ||| |||| |||    
T  37689319 aacttaagaaaacagcttatgacaattttca-aagcttttttcaacttattttcataagtgctctgatata-ctcataaaaacaacctatagcatataca 37689222  T
Q  231 aaaacaatttagcttcattttatctttctctataaagatagcttatgt 278  Q
    ||||||||||  ||| |||||||||||  ||||| | |||||||||||    
T  37689221 aaaacaattt--ctttattttatcttttgctatagaaatagcttatgt 37689176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 133 - 197
Target Start/End: Complemental strand, 43062779 - 43062715
Alignment:
Q  133 cttatgaaaacagcttctgacaattttcacaagcttttttcagcttattttcataagttctccaa 197  Q
    |||||||||||||  | || |||||||||||||||||||||||||| ||||||||||||||||||    
T  43062779 cttatgaaaacagtatatggcaattttcacaagcttttttcagcttcttttcataagttctccaa 43062715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 131 - 279
Target Start/End: Original strand, 53789441 - 53789589
Alignment:
Q  131 aacttatgaaaacagcttctgacaattttcacaagcttttttcagcttattttcataagttctccaaaatagcttacaaaaacagctaatatcatacaca 230  Q
    ||||| || ||||||||| ||||| |||||| ||||||||||||||||| ||||||||||||||||  ||||||||  | |||| || ||| |||| ||     
T  53789441 aacttttggaaacagcttatgacacttttcataagcttttttcagcttaatttcataagttctccatgatagcttatgataacaacttatagcatatacc 53789540  T
Q  231 aaaacaatttagcttcattttatctttctctataaagatagcttatgta 279  Q
    |||||| ||||  || | || ||||||  ||||| | ||||||||||||    
T  53789541 aaaacattttaattttagttcatcttttcctatagaaatagcttatgta 53789589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 74 - 197
Target Start/End: Original strand, 31365232 - 31365355
Alignment:
Q  74 tggattggcttatttgagctcatctattagcataagtttagtgaaaccgtcatggaaaacttatgaaaacagcttctgacaattttcacaagcttttttc 173  Q
    |||||||||||||||||| | ||||||| |||||| ||| |||| || ||   ||| |||||||||| ||||||| |||||||||||| ||   ||||||    
T  31365232 tggattggcttatttgagtttatctattggcataatttttgtgacactgtttgggagaacttatgaatacagcttatgacaattttcataaatctttttc 31365331  T
Q  174 agcttattttcataagttctccaa 197  Q
    | || |||||||||| ||||||||    
T  31365332 aactcattttcataaattctccaa 31365355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 163 - 241
Target Start/End: Complemental strand, 47132389 - 47132311
Alignment:
Q  163 aagcttttttcagcttattttcataagttctccaaaatagcttacaaaaacagctaatatcatacacaaaaacaattta 241  Q
    |||||||||||| ||||||||||||| |||||||| |||||||| ||||||| |  ||| |||| ||||||||||||||    
T  47132389 aagcttttttcaacttattttcataacttctccaatatagcttataaaaacaacctatagcatatacaaaaacaattta 47132311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 67 - 233
Target Start/End: Original strand, 13715488 - 13715656
Alignment:
Q  67 gcctgtttggattggcttatttgagctcatctattagcataagtttagtgaaaccgtcatggaaaacttatgaaaacagcttctgacaattttcacaagc 166  Q
    ||||||| |||| ||||||||||| || ||||| ||||||| |||| |||| || ||   | | |||||   |||||||||| |||||| ||||| ||||    
T  13715488 gcctgttcggatcggcttatttgatcttatctactagcatatgttttgtgagactgtttggtagaacttcctaaaacagcttatgacaactttcataagc 13715587  T
Q  167 ttttttcagcttattttcataagttctccaaaatagct--tacaaaaacagctaatatcatacacaaaa 233  Q
     ||||||| |||||||||||||||| ||||| || |||  || ||||||| || |||||||| ||||||    
T  13715588 atttttcaacttattttcataagttgtccaatatcgcttatataaaaacaacttatatcatatacaaaa 13715656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 131 - 251
Target Start/End: Complemental strand, 20257626 - 20257505
Alignment:
Q  131 aacttatgaaaacagcttctgacaattttcacaagcttttttcagcttatttt-cataagttctccaaaatagcttacaaaaacagctaatatcatacac 229  Q
    ||||||||||| |||||  |||||||||||| ||| |||||  | |||||||| |||||| ||||||| |||||||  ||||||| || ||| |||| ||    
T  20257626 aacttatgaaagcagctaatgacaattttcataagttttttaaaacttatttttcataagctctccaatatagcttcaaaaaacaacttatagcatatac 20257527  T
Q  230 aaaaacaatttagcttcatttt 251  Q
    |||||||||||| ||| |||||    
T  20257526 aaaaacaatttaactttatttt 20257505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 166 - 214
Target Start/End: Original strand, 33972749 - 33972797
Alignment:
Q  166 cttttttcagcttattttcataagttctccaaaatagcttacaaaaaca 214  Q
    |||||||||||||||||||| |||||||||||||||||||| |||||||    
T  33972749 cttttttcagcttattttcacaagttctccaaaatagcttataaaaaca 33972797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 139 - 206
Target Start/End: Complemental strand, 466275 - 466208
Alignment:
Q  139 aaaacagcttctgacaattttcacaagcttttttcagcttattttcataagttctccaaaatagctta 206  Q
    |||||||||| | ||| |||||  |||||||||| |||||||||||||||||||||||| ||||||||    
T  466275 aaaacagcttttaacatttttcttaagctttttttagcttattttcataagttctccaacatagctta 466208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 72 - 234
Target Start/End: Original strand, 18405752 - 18405914
Alignment:
Q  72 tttggattggcttatttgagctcatctattagcataagtttagtgaaaccgtcatggaa-aacttatgaaaacagcttctgacaattttcacaagctttt 170  Q
    |||||||||| ||||||||||| ||||| |  ||||||||| |||| || ||  || || ||||||||||||||| |   |||| |||||| || |||||    
T  18405752 tttggattggtttatttgagcttatctactgacataagttttgtgagactgtt-tgcaagaacttatgaaaacagttcacgacacttttcataatctttt 18405850  T
Q  171 ttcagcttattttcataagttctccaaaatagcttacaaaaacagctaatatcatacacaaaaa 234  Q
    |  |||||| ||||||||||||||||| ||||||||  |||||| || ||| |||| |||||||    
T  18405851 tcaagcttaatttcataagttctccaagatagcttatgaaaacaacttatagcatatacaaaaa 18405914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 134 - 189
Target Start/End: Original strand, 25453842 - 25453897
Alignment:
Q  134 ttatgaaaacagcttctgacaattttcacaagcttttttcagcttattttcataag 189  Q
    ||||||||||||||| ||| ||| |||||||||| |||||||||||||||||||||    
T  25453842 ttatgaaaacagcttatgaaaatgttcacaagctcttttcagcttattttcataag 25453897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 143 - 197
Target Start/End: Complemental strand, 46478767 - 46478713
Alignment:
Q  143 cagcttctgacaattttcacaagcttttttcagcttattttcataagttctccaa 197  Q
    |||||| ||||| |||||| |||||||||||| ||||||||||||||||||||||    
T  46478767 cagcttatgacagttttcataagcttttttcaacttattttcataagttctccaa 46478713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 137 - 206
Target Start/End: Original strand, 28795839 - 28795908
Alignment:
Q  137 tgaaaacagcttctgacaattttcacaagcttttttcagcttattttcataagttctccaaaatagctta 206  Q
    ||||||| | || |||||||||||  ||||| |||||||||||||||||||||||||| || ||||||||    
T  28795839 tgaaaacggtttttgacaattttcttaagctcttttcagcttattttcataagttctctaatatagctta 28795908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 138 - 206
Target Start/End: Complemental strand, 4401127 - 4401059
Alignment:
Q  138 gaaaacagcttctgacaattttcacaagcttttttcagcttattttcataagttctccaaaatagctta 206  Q
    ||||||||||| ||||||||| || ||||| |||| | |||||||||||||||||||||| ||| ||||    
T  4401127 gaaaacagcttatgacaatttccataagctgtttttaacttattttcataagttctccaatataactta 4401059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 126 - 206
Target Start/End: Complemental strand, 22203525 - 22203445
Alignment:
Q  126 tggaaaacttatgaaaacagcttctgacaattttcacaagcttttttcagcttattttcataagttctccaaaatagctta 206  Q
    |||| |||||||||||||||||| ||||| ||| |  ||||||  | ||| ||||||||||||||||||||| ||||||||    
T  22203525 tggagaacttatgaaaacagcttatgacattttacttaagcttaatgcagtttattttcataagttctccaagatagctta 22203445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 66 - 202
Target Start/End: Complemental strand, 36140030 - 36139897
Alignment:
Q  66 ggcctgtttggattggcttatttgagctcatctattagcataagtttagtgaaaccgtcatggaaaacttatgaaaacagcttctgacaattttcacaag 165  Q
    |||||||||| |||| |||||||||| | |||||||  ||||||  ||||||||| ||  || |||| | | ||||||||||| ||||| | ||||||||    
T  36140030 ggcctgtttgaattgacttatttgagtt-atctattgtcataagcatagtgaaactgttttg-aaaattcaagaaaacagcttatgaca-tgttcacaag 36139934  T
Q  166 cttttttcagcttattttcataagttctccaaaatag 202  Q
    || ||||||||||||||||||||| ||| ||| ||||    
T  36139933 ctgttttcagcttattttcataagctcttcaagatag 36139897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 134 - 182
Target Start/End: Complemental strand, 49556945 - 49556897
Alignment:
Q  134 ttatgaaaacagcttctgacaattttcacaagcttttttcagcttattt 182  Q
    ||||||||||||||| |||||||||||| |||||||||||| |||||||    
T  49556945 ttatgaaaacagcttatgacaattttcataagcttttttcaacttattt 49556897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 126 - 257
Target Start/End: Complemental strand, 1816677 - 1816547
Alignment:
Q  126 tggaaaacttatgaaaacagcttctgacaattttcacaagcttttttcagcttattttcataagttctccaaaatagcttacaaaaacagctaatatcat 225  Q
    |||| ||| |||||||| | ||| ||||| |||||| | ||| ||||||||||||||| ||||| ||||||  ||||||||  |||||| || ||||| |    
T  1816677 tggagaacatatgaaaataacttatgaca-ttttcataggctgttttcagcttattttgataagctctccagtatagcttatgaaaacaacttatatctt 1816579  T
Q  226 acacaaaaacaatttagcttcattttatcttt 257  Q
    | ||||||||| |||  ||| |||||||||||    
T  1816578 atacaaaaacagtttgactttattttatcttt 1816547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 163 - 206
Target Start/End: Original strand, 26990503 - 26990546
Alignment:
Q  163 aagcttttttcagcttattttcataagttctccaaaatagctta 206  Q
    ||||||||||||||||||||||||||||||||| | ||||||||    
T  26990503 aagcttttttcagcttattttcataagttctccgagatagctta 26990546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 158 - 237
Target Start/End: Original strand, 28622006 - 28622085
Alignment:
Q  158 ttcacaagcttttttcagcttattttcataagttctccaaaatagcttacaaaaacagctaatatcatacacaaaaacaa 237  Q
    |||| ||||| ||||||| |||||||||||||||||| || |||| |||  ||||||||| ||| | |||||||||||||    
T  28622006 ttcataagctgttttcaggttattttcataagttctcgaagatagtttatgaaaacagcttatagcttacacaaaaacaa 28622085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 184 - 279
Target Start/End: Original strand, 30956659 - 30956754
Alignment:
Q  184 cataagttctccaaaatagcttacaaaaacagctaatatcatacacaaaaacaatttagcttcattttatctttctctataaagatagcttatgta 279  Q
    |||||||||||||| |||||||   |||||| || ||| | || |||||||||||||| ||| |||||||||||  ||||| | ||||||||||||    
T  30956659 cataagttctccaagatagcttttgaaaacaacttatagcctatacaaaaacaatttaactttattttatcttttgctatagaaatagcttatgta 30956754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 184 - 279
Target Start/End: Original strand, 30972471 - 30972566
Alignment:
Q  184 cataagttctccaaaatagcttacaaaaacagctaatatcatacacaaaaacaatttagcttcattttatctttctctataaagatagcttatgta 279  Q
    |||||||||||||| |||||||   |||||| || ||| | || |||||||||||||| ||| |||||||||||  ||||| | ||||||||||||    
T  30972471 cataagttctccaagatagcttttgaaaacaacttatagcctatacaaaaacaatttaactttattttatcttttgctatagaaatagcttatgta 30972566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 158 - 217
Target Start/End: Complemental strand, 32582807 - 32582748
Alignment:
Q  158 ttcacaagcttttttcagcttattttcataagttctccaaaatagcttacaaaaacagct 217  Q
    |||| ||| |||||||| ||||||| |||||||||||||||||||||||  |||||||||    
T  32582807 ttcaaaagattttttcaacttatttccataagttctccaaaatagcttatgaaaacagct 32582748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 131 - 254
Target Start/End: Original strand, 34610786 - 34610909
Alignment:
Q  131 aacttatgaaaacagcttctgacaattttcacaagcttttttcagcttattttcataagttctccaaaatagcttacaaaaacagctaatatcatacaca 230  Q
    ||||||||||||| |||| ||||| | |||| |||   ||||||||| |||||||||||||| |||| ||||||||  ||| || || ||| | |  |||    
T  34610786 aacttatgaaaactgcttatgacattgttcataagtggttttcagctgattttcataagttcgccaagatagcttatgaaagcaacttataacttgtaca 34610885  T
Q  231 aaaacaatttagcttcattttatc 254  Q
    |||| |||||| ||||||||||||    
T  34610886 aaaataatttaacttcattttatc 34610909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 163 - 214
Target Start/End: Complemental strand, 35696296 - 35696245
Alignment:
Q  163 aagcttttttcagcttattttcataagttctccaaaatagcttacaaaaaca 214  Q
    |||||||||||| |||||||||| ||||||||||| |||||||| |||||||    
T  35696296 aagcttttttcaacttattttcacaagttctccaatatagcttataaaaaca 35696245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 70 - 189
Target Start/End: Complemental strand, 36101716 - 36101600
Alignment:
Q  70 tgtttggattggcttatttgagctcatctattagcataagtttagtgaaaccgtcatggaaaacttatgaaaacagcttctgacaattttcacaagcttt 169  Q
    |||||| |||| |||||||||||| |||||||  ||||||  ||||||||| ||  || |||| | | ||||||||||| ||||| | |||||||||| |    
T  36101716 tgtttgaattgacttatttgagct-atctattgtcataagcatagtgaaactgttttg-aaaattcaagaaaacagcttatgaca-tgttcacaagctgt 36101620  T
Q  170 tttcagcttattttcataag 189  Q
    ||||||||||||||||||||    
T  36101619 tttcagcttattttcataag 36101600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 169 - 284
Target Start/End: Original strand, 39602228 - 39602342
Alignment:
Q  169 ttttcagcttattttcataagttctccaaaatagcttacaaaaacagctaatatcatacacaaaaacaatttagcttcattttatctttctctataaaga 268  Q
    |||||| ||||||||||||||||||| || ||||||||  ||||||||| ||| | || ||   ||||||||| ||| || |||||||| |||||| | |    
T  39602228 ttttcaacttattttcataagttctcaaagatagcttatgaaaacagcttataacttatac-gcaacaatttaactttatgttatctttttctatagaaa 39602326  T
Q  269 tagcttatgtataagc 284  Q
    ||||||||| ||||||    
T  39602327 tagcttatgcataagc 39602342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 131 - 206
Target Start/End: Complemental strand, 45541660 - 45541586
Alignment:
Q  131 aacttatgaaaacagcttctgacaattttcacaagcttttttcagcttattttcataagttctccaaaatagctta 206  Q
    |||||||||||||||||| |||| || |||| ||||| ||||||| ||||| ||||||||| ||||| ||||||||    
T  45541660 aacttatgaaaacagcttatgac-atgttcataagctgttttcaggttattctcataagttatccaagatagctta 45541586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 131 - 202
Target Start/End: Complemental strand, 46031080 - 46031009
Alignment:
Q  131 aacttatgaaaacagcttctgacaattttcacaagcttttttcagcttattttcataagttctccaaaatag 202  Q
    |||||| ||||||||| | ||||| | |||| ||||| ||||||||||||||| ||||||||||||| ||||    
T  46031080 aacttacgaaaacagcctatgacattattcataagctgttttcagcttattttaataagttctccaagatag 46031009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 67 - 117
Target Start/End: Original strand, 20170630 - 20170680
Alignment:
Q  67 gcctgtttggattggcttatttgagctcatctattagcataagtttagtga 117  Q
    ||||||||||||||||||||||||||| ||||| |  ||||||||||||||    
T  20170630 gcctgtttggattggcttatttgagcttatctagtgacataagtttagtga 20170680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 174 - 276
Target Start/End: Complemental strand, 21335722 - 21335620
Alignment:
Q  174 agcttattttcataagttctccaaaatagcttacaaaaacagctaatatcatacacaaaaacaatttagcttcattttatctttctctataaagatagct 273  Q
    ||||||||||||||||||||| |  ||||||||  ||||||||| | |  ||| |||||||||| | | ||| ||||||||||| ||||||||  |||||    
T  21335722 agcttattttcataagttctctagtatagcttatgaaaacagcttacagaatatacaaaaacaactaaactttattttatctttttctataaaattagct 21335623  T
Q  274 tat 276  Q
    |||    
T  21335622 tat 21335620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 163 - 217
Target Start/End: Original strand, 44747420 - 44747474
Alignment:
Q  163 aagcttttttcagcttattttcataagttctccaaaatagcttacaaaaacagct 217  Q
    |||||| |||||||||||||||||||||| ||||| ||||||||  |||||||||    
T  44747420 aagcttctttcagcttattttcataagttttccaagatagcttatgaaaacagct 44747474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 66 - 108
Target Start/End: Complemental strand, 51929896 - 51929854
Alignment:
Q  66 ggcctgtttggattggcttatttgagctcatctattagcataa 108  Q
    ||||||||||||||| |||||||||||| ||||||||||||||    
T  51929896 ggcctgtttggattgacttatttgagcttatctattagcataa 51929854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 127 - 192
Target Start/End: Complemental strand, 944656 - 944591
Alignment:
Q  127 ggaaaacttatgaaaacagcttctgacaattttcacaagcttttttcagcttattttcataagttc 192  Q
    |||||||||||||||| ||||| ||||||||| || || ||||||||| |||| ||||||| ||||    
T  944656 ggaaaacttatgaaaatagcttatgacaatttccataatcttttttcaacttactttcatatgttc 944591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 68 - 193
Target Start/End: Original strand, 9832672 - 9832797
Alignment:
Q  68 cctgtttggattggcttatttgagctcatctattagcataagtttagtgaaaccgtcatggaaaacttatgaaaacagcttctgacaattttcacaagct 167  Q
    ||||||| ||||| |||||||||||| || ||||  ||||||||| || |||| ||   ||| ||||| |||||||||||| || |  |||||| || ||    
T  9832672 cctgtttagattgacttatttgagcttatttattgacataagttttgtcaaactgtttgggagaacttttgaaaacagcttatgccttttttcataaact 9832771  T
Q  168 tttttcagcttattttcataagttct 193  Q
    ||||||| ||||| || |||||||||    
T  9832772 tttttcaacttatatttataagttct 9832797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 131 - 300
Target Start/End: Complemental strand, 31403448 - 31403279
Alignment:
Q  131 aacttatgaaaacagcttctgacaattttcacaagcttttttcagcttattttcataagttctccaaaatagcttacaaaaacagctaatatcatacaca 230  Q
    ||||||||| ||||| || | ||| | |||| ||| | ||| ||||||||||||| | ||||||||| |||||  || |||||| ||  |||| || ||     
T  31403448 aacttatgagaacagtttataacattgttcataagttgtttacagcttattttcacaggttctccaagatagccaacgaaaacaacttgtatcttatacg 31403349  T
Q  231 aaaacaatttagcttcattttatctttctctataaagatagcttatgtataagcgcttatcataataagc 300  Q
    |||||| |||| |||||||||||||||   |||  | ||||||||| |||||| |||||| || ||||||    
T  31403348 aaaacattttaacttcattttatcttttgatatggaaatagcttatatataagtgcttatgatgataagc 31403279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 164 - 217
Target Start/End: Original strand, 50600191 - 50600244
Alignment:
Q  164 agcttttttcagcttattttcataagttctccaaaatagcttacaaaaacagct 217  Q
    |||| ||||||||||||||||||||||||||||| |||||| |  |||||||||    
T  50600191 agctgttttcagcttattttcataagttctccaatatagctgatgaaaacagct 50600244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 135 - 187
Target Start/End: Complemental strand, 26911671 - 26911619
Alignment:
Q  135 tatgaaaacagcttctgacaattttcacaagcttttttcagcttattttcata 187  Q
    |||||||||||||| |||||||||||| ||| |||||||| ||||||| ||||    
T  26911671 tatgaaaacagcttatgacaattttcataagtttttttcaacttatttccata 26911619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 145 - 197
Target Start/End: Original strand, 35574862 - 35574913
Alignment:
Q  145 gcttctgacaattttcacaagcttttttcagcttattttcataagttctccaa 197  Q
    |||| |||||||||||| ||| ||||||| |||||||||||||||||||||||    
T  35574862 gcttatgacaattttcataag-ttttttctgcttattttcataagttctccaa 35574913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 169 - 217
Target Start/End: Complemental strand, 41633412 - 41633364
Alignment:
Q  169 ttttcagcttattttcataagttctccaaaatagcttacaaaaacagct 217  Q
    ||||||||||||||||||||| |||||||||||||| |  |||||||||    
T  41633412 ttttcagcttattttcataagctctccaaaatagctgatgaaaacagct 41633364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 67 - 197
Target Start/End: Original strand, 22882 - 23013
Alignment:
Q  67 gcctgtttggattggcttatttgagctcatctattagcataagtttagtgaaaccgtcatggaaaacttatgaaaacagcttctgacaattttcacaa-g 165  Q
    |||||||  ||||||||||||||| ||  |||| | |||||||||| |||| |  ||   ||| || |||||||||||||||  || ||||||||||| |    
T  22882 gcctgttgagattggcttatttgaacttgtctactggcataagttttgtgagattgtttaggagaagttatgaaaacagcttacgataattttcacaagg 22981  T
Q  166 cttttttcagcttattttcataagttctccaa 197  Q
     |||||| |||||||| ||||||||| |||||    
T  22982 tttttttgagcttattatcataagttatccaa 23013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 172 - 215
Target Start/End: Complemental strand, 2719517 - 2719474
Alignment:
Q  172 tcagcttattttcataagttctccaaaatagcttacaaaaacag 215  Q
    |||||||||||||||||||||||||| ||||||||  |||||||    
T  2719517 tcagcttattttcataagttctccaagatagcttatgaaaacag 2719474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 131 - 190
Target Start/End: Complemental strand, 5391968 - 5391910
Alignment:
Q  131 aacttatgaaaacagcttctgacaattttcacaagcttttttcagcttattttcataagt 190  Q
    |||||||||||||||||| ||||| | |||| ||||| |||||| |||||||||||||||    
T  5391968 aacttatgaaaacagcttatgaca-tgttcataagctgttttcaacttattttcataagt 5391910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 127 - 206
Target Start/End: Original strand, 23808041 - 23808119
Alignment:
Q  127 ggaaaacttatgaaaacagcttctgacaattttcacaagcttttttcagcttattttcataagttctccaaaatagctta 206  Q
    ||||||||||||||| |||||| ||||| | |||||||  | |||||| |||||||||||||  ||||||| ||||||||    
T  23808041 ggaaaacttatgaaagcagcttatgaca-tgttcacaaattgttttcatcttattttcataaactctccaagatagctta 23808119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 167 - 214
Target Start/End: Complemental strand, 33231781 - 33231734
Alignment:
Q  167 ttttttcagcttattttcataagttctccaaaatagcttacaaaaaca 214  Q
    ||||| |||||||||||||| |||||||||| |||| |||||||||||    
T  33231781 tttttccagcttattttcattagttctccaagatagattacaaaaaca 33231734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 158 - 221
Target Start/End: Original strand, 36783341 - 36783404
Alignment:
Q  158 ttcacaagcttttttcagcttattttcataagttctccaaaatagcttacaaaaacagctaata 221  Q
    |||| ||||| |||||||||||| ||||||| | |||||| ||||||||  |||||||||||||    
T  36783341 ttcataagctgttttcagcttatattcataattgctccaatatagcttatgaaaacagctaata 36783404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 169 - 251
Target Start/End: Original strand, 1217818 - 1217900
Alignment:
Q  169 ttttcagcttattttcataagttctccaaaatagcttacaaaaacagctaatatcatacacaaaaacaatttagcttcatttt 251  Q
    |||||| |||| |||||||||||||| |  ||||||||  ||||||||| ||| | ||||  ||||||||||| |||||||||    
T  1217818 ttttcatcttactttcataagttctcaaggatagcttatgaaaacagcttataacttacatgaaaacaatttaacttcatttt 1217900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 174 - 256
Target Start/End: Complemental strand, 14145959 - 14145877
Alignment:
Q  174 agcttattttcataagttctccaaaatagcttacaaaaacagctaatatcatacacaaaaacaatttagcttcattttatctt 256  Q
    |||||||||||||||||  ||||| ||||||||  |||| | || ||| |||| || ||||||||||| ||| ||||||||||    
T  14145959 agcttattttcataagtaatccaagatagcttatgaaaataacttatagcatatacgaaaacaatttaactttattttatctt 14145877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 158 - 240
Target Start/End: Complemental strand, 40665492 - 40665410
Alignment:
Q  158 ttcacaagcttttttcagcttattttcataagttctccaaaatagcttacaaaaacagctaatatcatacacaaaaacaattt 240  Q
    |||| ||||| ||||||||||||||| ||||| ||||||| ||| ||||  |||||| || ||| | |||||||||| |||||    
T  40665492 ttcataagctgttttcagcttatttttataagctctccaagataacttatgaaaacatcttataacttacacaaaaataattt 40665410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 66 - 108
Target Start/End: Original strand, 44014713 - 44014755
Alignment:
Q  66 ggcctgtttggattggcttatttgagctcatctattagcataa 108  Q
    |||||||||||||||||||||||||| | ||||| ||||||||    
T  44014713 ggcctgtttggattggcttatttgagtttatctactagcataa 44014755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 172 - 202
Target Start/End: Original strand, 50946307 - 50946337
Alignment:
Q  172 tcagcttattttcataagttctccaaaatag 202  Q
    |||||||||||||||||||||||||||||||    
T  50946307 tcagcttattttcataagttctccaaaatag 50946337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 69 - 186
Target Start/End: Complemental strand, 26878352 - 26878235
Alignment:
Q  69 ctgtttggattggcttatttgagctcatctattagcataagtttagtgaaaccgtcatggaaaacttatgaaaacagcttctgacaattttcacaagctt 168  Q
    ||||||| ||||||||||| ||||| ||||| |  ||||||||  ||||||| ||    || ||||| |||||| ||||| ||||| | |||| || ||     
T  26878352 ctgtttgaattggcttattcgagcttatctactgacataagttgcgtgaaactgtttgagagaacttgtgaaaatagcttatgacattgttcataaactg 26878253  T
Q  169 ttttcagcttattttcat 186  Q
    ||||||||||||||||||    
T  26878252 ttttcagcttattttcat 26878235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 169 - 206
Target Start/End: Original strand, 33883768 - 33883805
Alignment:
Q  169 ttttcagcttattttcataagttctccaaaatagctta 206  Q
    |||||||||||||||||||||||||| || ||||||||    
T  33883768 ttttcagcttattttcataagttctctaagatagctta 33883805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 133 - 206
Target Start/End: Original strand, 34254791 - 34254863
Alignment:
Q  133 cttatgaaaacagcttctgacaattttcacaagcttttttcagcttattttcataagttctccaaaatagctta 206  Q
    ||||||||||||| || ||||| | | || |||||  ||||||||||||| ||||||||||||| |||||||||    
T  34254791 cttatgaaaacagtttatgaca-tatccataagctactttcagcttatttacataagttctccagaatagctta 34254863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 231 - 299
Target Start/End: Original strand, 34638044 - 34638113
Alignment:
Q  231 aaaacaatttagcttca-ttttatctttctctataaagatagcttatgtataagcgcttatcataataag 299  Q
    ||||||||||| ||| | |||||||||| |||||| | ||||||||| |||||||| ||||||| |||||    
T  34638044 aaaacaatttaactttaattttatctttttctatagaaatagcttatatataagcggttatcatgataag 34638113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 66 - 98
Target Start/End: Original strand, 1820047 - 1820079
Alignment:
Q  66 ggcctgtttggattggcttatttgagctcatct 98  Q
    |||||||||||||||||||||||||||| ||||    
T  1820047 ggcctgtttggattggcttatttgagcttatct 1820079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 156 - 212
Target Start/End: Complemental strand, 7301404 - 7301348
Alignment:
Q  156 ttttcacaagcttttttcagcttattttcataagttctccaaaatagcttacaaaaa 212  Q
    |||||| || ||||||||| |||||||||| ||||||||||| |||  |||||||||    
T  7301404 ttttcataaacttttttcaacttattttcacaagttctccaagataaattacaaaaa 7301348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 167 - 279
Target Start/End: Complemental strand, 31106231 - 31106119
Alignment:
Q  167 ttttttcagcttattttcataagttctccaaaatagcttacaaaaacagctaatatcatacacaaaaacaatttagcttcattttatctttctctataaa 266  Q
    ||||||||||||||||| | ||| ||||||| |||  |||| |||| | || ||| |||| ||||||| |||||| ||||||| |||  ||  |||||||    
T  31106231 ttttttcagcttatttttaaaagatctccaagataaattacgaaaataacttataacatatacaaaaataatttaacttcattatattattagctataaa 31106132  T
Q  267 gatagcttatgta 279  Q
      |||||||||||    
T  31106131 attagcttatgta 31106119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 67 - 99
Target Start/End: Complemental strand, 47132470 - 47132438
Alignment:
Q  67 gcctgtttggattggcttatttgagctcatcta 99  Q
    ||||||||||||||||||||||||||| |||||    
T  47132470 gcctgtttggattggcttatttgagcttatcta 47132438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 72; Significance: 1e-32; HSPs: 66)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 66 - 257
Target Start/End: Complemental strand, 48470199 - 48470008
Alignment:
Q  66 ggcctgtttggattggcttatttgagctcatctattagcataagtttagtgaaaccgtcatggaaaacttatgaaaacagcttctgacaattttcacaag 165  Q
    |||||||| ||||||||||||||||||| ||||||   |||||||||  ||| |  ||   ||| |||||||||||||||||| || || |||||| |||    
T  48470199 ggcctgttaggattggcttatttgagcttatctatagacataagttttatgagattgtttgggagaacttatgaaaacagcttatggcatttttcataag 48470100  T
Q  166 cttttttcagcttattttcataagttctccaaaatagcttacaaaaacagctaatatcatacacaaaaacaatttagcttcattttatcttt 257  Q
    ||||||| ||||||| |||||||||| | ||||||||||||  |||||| || |||| ||| |||||||||||||| ||| |||||||||||    
T  48470099 cttttttgagcttatgttcataagttattcaaaatagcttatgaaaacaacttatattatatacaaaaacaatttaacttaattttatcttt 48470008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 131 - 279
Target Start/End: Original strand, 30570911 - 30571059
Alignment:
Q  131 aacttatgaaaacagcttctgacaattttcacaagcttttttcagcttattttcataagttctccaaaatagcttacaaaaacagctaatatcatacaca 230  Q
    ||||| |||||||||||| |||||||||||| ||||||||||||  ||| |||||||||||||||||  ||| ||| ||||| |||| ||| |||| |||    
T  30570911 aacttgtgaaaacagcttatgacaattttcataagcttttttcatgttaatttcataagttctccaatgtaggttataaaaatagcttatagcatataca 30571010  T
Q  231 aaaacaatttagcttcattttatctttctctataaagatagcttatgta 279  Q
    |||| |||||| ||| |||||| ||||| ||||| |  |||||||||||    
T  30571011 aaaataatttaactttattttacctttcgctatataagtagcttatgta 30571059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 74 - 277
Target Start/End: Complemental strand, 420507 - 420304
Alignment:
Q  74 tggattggcttatttgagctcatctattagcataagtttagtgaaaccgtcatggaaaacttatgaaaacagcttctgacaattttcacaagcttttttc 173  Q
    ||||||||||| ||||||||  |||| | || |||| || |||| || ||   ||| ||||||||||||||  || ||||| |||||  |||| ||||||    
T  420507 tggattggcttctttgagcttgtctactggcttaagctttgtgagactgtttgggagaacttatgaaaacaatttatgacagttttctaaagcctttttc 420408  T
Q  174 agcttattttcataagttctccaaaatagcttacaaaaacagctaatatcatacacaaaaacaatttagcttcattttatctttctctataaagatagct 273  Q
    | |||||||||||||||||||||| |||||||||  ||||| || ||| |||| |||||||||||| | | | |||||||||||  ||||||| ||||||    
T  420407 aacttattttcataagttctccaatatagcttacggaaacaacttatagcatatacaaaaacaattgaacattattttatcttttgctataaacatagct 420308  T
Q  274 tatg 277  Q
    ||||    
T  420307 tatg 420304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 131 - 234
Target Start/End: Complemental strand, 28614523 - 28614420
Alignment:
Q  131 aacttatgaaaacagcttctgacaattttcacaagcttttttcagcttattttcataagttctccaaaatagcttacaaaaacagctaatatcatacaca 230  Q
    |||||||||||||| | | | |||||||||||||||||||||||| ||| ||||||||||||||||| | |||||  ||||||||||||||||||| |||    
T  28614523 aacttatgaaaacaacatataacaattttcacaagcttttttcagtttaatttcataagttctccaatacagcttttaaaaacagctaatatcatataca 28614424  T
Q  231 aaaa 234  Q
    ||||    
T  28614423 aaaa 28614420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 83 - 253
Target Start/End: Original strand, 33601342 - 33601511
Alignment:
Q  83 ttatttgagctcatctattagcataagtttagtgaaaccgtcatggaaaacttatgaaaacagcttctgacaattttcacaagcttttttcagcttattt 182  Q
    ||||||||||| ||||||| |||||||||| |||| ||  |  | || |||||||||||||||||| ||||| |||||| |||||||||||||||||  |    
T  33601342 ttatttgagcttatctattggcataagttttgtgagactcttttcgagaacttatgaaaacagcttatgacacttttcataagcttttttcagcttaaat 33601441  T
Q  183 tcataagttctccaaaatagcttacaaaaacagctaatatcatacacaaaaacaatttagcttcattttat 253  Q
    |||||||||||| || ||||||||  |||||| || ||| || | ||||||| |||||| ||| |||||||    
T  33601442 tcataagttctctaagatagctta-taaaacaacttatagcaaatacaaaaataatttaactttattttat 33601511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 70 - 214
Target Start/End: Original strand, 11619077 - 11619221
Alignment:
Q  70 tgtttggattggcttatttgagctcatctattagcataagtttagtgaaaccgtcatggaaaacttatgaaaacagcttctgacaattttcacaagcttt 169  Q
    |||||||||||||||||||||||| ||||| |  |||||| ||  |||||| |    ||| || ||||||||||| ||| |||||||||||| |||||||    
T  11619077 tgtttggattggcttatttgagcttatctactgacataagcttcatgaaacagattgggagaatttatgaaaacaacttatgacaattttcataagcttt 11619176  T
Q  170 tttcagcttattttcataagttctccaaaatagcttacaaaaaca 214  Q
    ||||| |||| |||||||||||||||||  ||||||| |||||||    
T  11619177 tttcaacttaatttcataagttctccaacgtagcttataaaaaca 11619221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 162 - 241
Target Start/End: Original strand, 46280283 - 46280362
Alignment:
Q  162 caagcttttttcagcttattttcataagttctccaaaatagcttacaaaaacagctaatatcatacacaaaaacaattta 241  Q
    ||||||||||||||| |||||||||||||||||||| |||||||| |||||||||| ||| |||| ||||||||||||||    
T  46280283 caagcttttttcagcctattttcataagttctccaatatagcttataaaaacagcttatagcatatacaaaaacaattta 46280362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 68 - 241
Target Start/End: Original strand, 19302480 - 19302649
Alignment:
Q  68 cctgtttggattggcttatttgagctcatctattagcataagtttagtgaaaccgtcatggaaaacttatgaaaacagcttctgacaattttcacaagct 167  Q
    |||||||| |||| |||||||||||| ||||| |  ||||||||| |||| |   |   ||| || ||||||||||||||| |||||||||||| || ||    
T  19302480 cctgtttgaattgacttatttgagcttatctactgacataagttttgtgagaatatttgggagaatttatgaaaacagcttatgacaattttcataaact 19302579  T
Q  168 tttttcagcttattttcataagttctccaaaatagcttacaaaaacagctaatatcatacacaaaaacaattta 241  Q
    ||||||| ||||||||||||||||||     |||||||| ||||||| || ||| |||| ||||||||||||||    
T  19302580 tttttcaacttattttcataagttct----tatagcttataaaaacaacttataacatatacaaaaacaattta 19302649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 131 - 239
Target Start/End: Complemental strand, 34744118 - 34744010
Alignment:
Q  131 aacttatgaaaacagcttctgacaattttcacaagcttttttcagcttattttcataagttctccaaaatagcttacaaaaacagctaatatcatacaca 230  Q
    |||| ||||||| | ||| ||||||||||||||||||||||||  |||||||| ||||||||||||| ||||||||  |||||| || ||| |||| |||    
T  34744118 aactaatgaaaagaacttatgacaattttcacaagcttttttcgccttatttttataagttctccaatatagcttatgaaaacaacttataccatataca 34744019  T
Q  231 aaaacaatt 239  Q
    |||||||||    
T  34744018 aaaacaatt 34744010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 70 - 257
Target Start/End: Complemental strand, 20526597 - 20526410
Alignment:
Q  70 tgtttggattggcttatttgagctcatctattagcataagtttagtgaaaccgtcatggaaaacttatgaaaacagcttctgacaattttcacaagcttt 169  Q
    ||||||||||| |||||||||| | ||||||| | | || ||| |||| || ||    || ||||||||||||||| || | ||| |||||  ||||| |    
T  20526597 tgtttggattgacttatttgagtttatctattggtagaaattttgtgagactgtttgagagaacttatgaaaacagtttatcacatttttcgtaagctgt 20526498  T
Q  170 tttcagcttattttcataagttctccaaaatagcttacaaaaacagctaatatcatacacaaaaacaatttagcttcattttatcttt 257  Q
    ||| ||||||||||||| |||||||||||||||||||  ||||||||| ||| |||  ||||| | |||||| ||| |||||||||||    
T  20526497 ttttagcttattttcattagttctccaaaatagcttatgaaaacagcttatagcatgtacaaacataatttaactttattttatcttt 20526410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 128 - 241
Target Start/End: Original strand, 33602004 - 33602116
Alignment:
Q  128 gaaaacttatgaaaacagcttctgacaattttcacaagcttttttcagcttattttcataagttctccaaaatagcttacaaaaacagctaatatcatac 227  Q
    ||||||||||||||||||||| ||||| |||||| |||| ||||||||||||  ||||||||||||| || |||||||| |||| || || ||| || |     
T  33602004 gaaaacttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcataagttctctaagatagcttataaaacca-cttatagcaaat 33602102  T
Q  228 acaaaaacaattta 241  Q
    ||||||||||||||    
T  33602103 acaaaaacaattta 33602116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 168 - 298
Target Start/End: Original strand, 37064481 - 37064613
Alignment:
Q  168 tttttcagcttattttcataagttctccaaaatagcttacaaaaacagctaatatcatacacaaaaacaatttagcttcattttatctttctctataaag 267  Q
    ||||||||||||||||||||||| ||| |||||||||||| ||||||||| ||| ||||   |||||||||||| ||  |||| ||||||  ||||| |     
T  37064481 tttttcagcttattttcataagtcctctaaaatagcttacgaaaacagcttatagcatatgtaaaaacaatttaactgtatttcatctttggctatagaa 37064580  T
Q  268 atagcttatgt--ataagcgcttatcataataa 298  Q
    |||||| ||||  ||||||||||||||| ||||    
T  37064581 atagctcatgtacataagcgcttatcatcataa 37064613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 66 - 250
Target Start/End: Original strand, 17944258 - 17944442
Alignment:
Q  66 ggcctgtttggattggcttatttgagctcatctattagcataagtttagtgaaaccgtcatggaaaacttatgaaaacagcttctgacaattttcacaag 165  Q
    |||||||||||| || ||||||| |||| ||||| | ||||||| || |||| || ||    || ||||||| |||||||||| ||||| |||||| | |    
T  17944258 ggcctgtttggagtgacttatttaagcttatctactggcataagctttgtgagactgtttcagacaacttataaaaacagcttatgacacttttcatatg 17944357  T
Q  166 cttttttcagcttattttcataagttctccaaaatagcttacaaaaacagctaatatcatacacaaaaacaatttagcttcattt 250  Q
    |||||||||||||| |||||||| || ||||| ||| ||||  |||||| || | | |||| |||||||||||||| ||| ||||    
T  17944358 cttttttcagcttaatttcataaattatccaagataacttatgaaaacaacttacaacatatacaaaaacaatttaactttattt 17944442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 131 - 214
Target Start/End: Original strand, 21568475 - 21568558
Alignment:
Q  131 aacttatgaaaacagcttctgacaattttcacaagcttttttcagcttattttcataagttctccaaaatagcttacaaaaaca 214  Q
    |||||||||||||||||| | |||||||||| ||||| |||||| |||| || |||||||||||||| |||||||| |||||||    
T  21568475 aacttatgaaaacagcttataacaattttcataagctcttttcaacttagttccataagttctccaatatagcttataaaaaca 21568558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 137 - 214
Target Start/End: Original strand, 39629943 - 39630020
Alignment:
Q  137 tgaaaacagcttctgacaattttcacaagcttttttcagcttattttcataagttctccaaaatagcttacaaaaaca 214  Q
    |||||||||||| |||||||||||| |||||||||||| |||||  ||||||||||| ||| |||||||| |||||||    
T  39629943 tgaaaacagcttatgacaattttcataagcttttttcaacttatagtcataagttcttcaatatagcttaaaaaaaca 39630020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 134 - 214
Target Start/End: Original strand, 19022568 - 19022648
Alignment:
Q  134 ttatgaaaacagcttctgacaattttcacaagcttttttcagcttattttcataagttctccaaaatagcttacaaaaaca 214  Q
    ||||||||||| ||| |||||||||||| ||| | | |||| |||||||||||||||||||||| |||||||| |||||||    
T  19022568 ttatgaaaacaacttatgacaattttcataagttgtcttcaacttattttcataagttctccaatatagcttataaaaaca 19022648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 101 - 216
Target Start/End: Original strand, 44989627 - 44989743
Alignment:
Q  101 tagcataagtttagtgaaaccgtcatggaaaacttatgaaaacagcttctgacaattttcacaagct-tttttcagcttattttcataagttctccaaaa 199  Q
    |||||||||||| |||| || ||   |||||||||||||||||| ||||||||| | |||||||||| |||| |||||||||||||||| |||| ||| |    
T  44989627 tagcataagttttgtgagactgtttgggaaaacttatgaaaacaacttctgacattgttcacaagctgttttgcagcttattttcataatttctacaaga 44989726  T
Q  200 tagcttacaaaaacagc 216  Q
    || ||||  ||||||||    
T  44989727 tatcttatgaaaacagc 44989743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 64 - 182
Target Start/End: Complemental strand, 5947398 - 5947280
Alignment:
Q  64 atggcctgtttggattggcttatttgagctcatctattagcataagtttagtgaaaccgtcatggaa-aacttatgaaaacagcttctgacaattttcac 162  Q
    |||||||||||||||||||||||||||||| ||||||| | ||||||||  ||| || ||  ||||| ||||| ||||| |||||| ||||| ||||||     
T  5947398 atggcctgtttggattggcttatttgagcttatctattggtataagttttatgagactgt-ttggaagaacttttgaaaccagcttatgacatttttcat 5947300  T
Q  163 aagcttttttcagcttattt 182  Q
    | ||||||| ||||||||||    
T  5947299 atgctttttacagcttattt 5947280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 139 - 206
Target Start/End: Original strand, 38499901 - 38499968
Alignment:
Q  139 aaaacagcttctgacaattttcacaagcttttttcagcttattttcataagttctccaaaatagctta 206  Q
    |||||||||| ||||| |||||| ||||||||| ||||||||||||||||||||||||| || |||||    
T  38499901 aaaacagcttatgacatttttcataagctttttccagcttattttcataagttctccaagattgctta 38499968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 133 - 191
Target Start/End: Original strand, 27566676 - 27566734
Alignment:
Q  133 cttatgaaaacagcttctgacaattttcacaagcttttttcagcttattttcataagtt 191  Q
    |||||||||| ||||| |||||| |||||||||||||||||| ||||||||||||||||    
T  27566676 cttatgaaaatagcttatgacaactttcacaagcttttttcaacttattttcataagtt 27566734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 131 - 241
Target Start/End: Original strand, 27863705 - 27863815
Alignment:
Q  131 aacttatgaaaacagcttctgacaattttcacaagcttttttcagcttattttcataagttctccaaaatagcttacaaaaacagctaatatcatacaca 230  Q
    ||||||||||||||||||  || |||||||| || ||||||||||||||| ||||||||||||| || |||| |||  |||||| || ||| |||| |||    
T  27863705 aacttatgaaaacagcttgagaaaattttcaaaaacttttttcagcttatgttcataagttctctaatatagtttattaaaacaacttatagcatataca 27863804  T
Q  231 aaaacaattta 241  Q
    || | ||||||    
T  27863805 aataaaattta 27863815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 150 - 276
Target Start/End: Original strand, 38138478 - 38138604
Alignment:
Q  150 tgacaattttcacaagcttttttcagcttattttcataagttctccaaaatagcttacaaaaacagctaatatcatacacaaaaacaatttagcttcatt 249  Q
    |||||||||||| |||||||||||| |||||||||||||||||  ||| |||||| | ||||||| || ||| |||| |||||| |||| || | | | |    
T  38138478 tgacaattttcataagcttttttcaacttattttcataagttcgtcaatatagctaataaaaacaacttatagcatatacaaaatcaatgtaacgttact 38138577  T
Q  250 ttatctttctctataaagatagcttat 276  Q
    |||||||   ||||||| |||||||||    
T  38138578 ttatcttatactataaaaatagcttat 38138604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 66 - 234
Target Start/End: Complemental strand, 45593684 - 45593514
Alignment:
Q  66 ggcctgtttggattggcttatttgagctcatct-attagcataagtttagtgaaaccgtcatggaaaacttatgaaaacagcttctgacaattttcacaa 164  Q
    |||||||||||||||||||||||||| | || | | |  |||||| || |||| || ||   ||| ||||||| |||||| ||  ||||| |||||| ||    
T  45593684 ggcctgtttggattggcttatttgagtttatattactgacataagctttgtgagactgtttgggagaacttataaaaacatctgatgacatttttcataa 45593585  T
Q  165 gcttttttc-agcttattttcataagttctccaaaatagcttacaaaaacagctaatatcatacacaaaaa 234  Q
    ||||||||| || |||||||| |||||||||||| |||||||| ||||| |||| ||| |||| |||||||    
T  45593584 gcttttttccagtttattttcgtaagttctccaagatagcttagaaaaatagcttatagcatatacaaaaa 45593514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 138 - 236
Target Start/End: Complemental strand, 49019951 - 49019853
Alignment:
Q  138 gaaaacagcttctgacaattttcacaagcttttttcagcttattttcataagttctccaaaatagcttacaaaaacagctaatatcatacacaaaaaca 236  Q
    ||||| ||||| ||| ||||||||||| |||||||| | ||||||||||||||||| ||| ||| |||| ||||| |||| ||| |||| |||||||||    
T  49019951 gaaaaaagcttatgaaaattttcacaatcttttttcggtttattttcataagttctacaatataacttataaaaatagcttatagcatatacaaaaaca 49019853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 66 - 255
Target Start/End: Original strand, 40377767 - 40377956
Alignment:
Q  66 ggcctgtttggattggcttatttgagctcatctattagcataagtttagtgaaaccgtcatggaaaacttatgaaaacagcttctgacaattttcacaag 165  Q
    ||||| |||||||||||||| ||||||| ||||| |    |||||||||||| || ||    ||||  || |||||||||||| |||| ||||| | |||    
T  40377767 ggcctatttggattggcttagttgagcttatctactgaattaagtttagtgagactgttgaagaaattttttgaaaacagcttttgactattttaataag 40377866  T
Q  166 cttttttcagcttattttcataagttctccaaaatagcttacaaaaacagctaatatcatacacaaaaacaatttagcttcattttatct 255  Q
    ||||||| || ||||||||||||||||||||| |||| |||  |||||| ||   | |||| ||||||| |||||| ||| |||| ||||    
T  40377867 cttttttgagtttattttcataagttctccaatataggttatgaaaacaacttgcaacatatacaaaaagaatttaactttatttcatct 40377956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 133 - 257
Target Start/End: Complemental strand, 39280050 - 39279926
Alignment:
Q  133 cttatgaaaacagcttctgacaattttcacaagcttttttcagcttattttcataagttctccaaaatagcttacaaaaacagctaatatcatacacaaa 232  Q
    ||||| |||||||||| |  || ||| || ||||||||||||||||||||||| ||||||||||| |||  |||  ||| ||||  ||| |||| ||| |    
T  39280050 cttataaaaacagcttatagcattttacataagcttttttcagcttattttcaaaagttctccaagataatttatgaaatcagcctataacatatacaca 39279951  T
Q  233 aacaatttagcttcattttatcttt 257  Q
    ||||||||| ||| |||||||||||    
T  39279950 aacaatttaacttaattttatcttt 39279926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 151 - 279
Target Start/End: Original strand, 40252107 - 40252235
Alignment:
Q  151 gacaattttcacaagcttttttcagcttattttcataagttctccaaaatagcttacaaaaacagctaatatcatacacaaaaacaatttagcttcattt 250  Q
    ||||||||||  |||||| | |||||||||||||||||||||||||| ||| ||||  |||| |||| ||| |||| |||||||| ||||| |||  |||    
T  40252107 gacaattttcgtaagcttctatcagcttattttcataagttctccaagataacttatgaaaagagcttataacatatacaaaaacgatttaactttgttt 40252206  T
Q  251 tatctttctctataaagatagcttatgta 279  Q
    |||| ||  | |||||  |||||||||||    
T  40252207 tatcatttgcaataaaactagcttatgta 40252235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 133 - 256
Target Start/End: Complemental strand, 12110447 - 12110325
Alignment:
Q  133 cttatgaaaacagcttctgacaattttcacaagcttttttcagcttattttcataagttctccaaaatagcttacaaaaacagctaatatcatacacaaa 232  Q
    |||||||||||| ||| ||||| | ||||||| || |||| || ||||||||||||||||| ||| ||||||||  ||||||||| ||| | || || ||    
T  12110447 cttatgaaaacaacttatgaca-tgttcacaaactgtttttagattattttcataagttcttcaagatagcttatgaaaacagcttatagcttataccaa 12110349  T
Q  233 aacaatttagcttcattttatctt 256  Q
    ||||||||  ||| ||||||||||    
T  12110348 aacaatttgactttattttatctt 12110325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 131 - 206
Target Start/End: Original strand, 19214386 - 19214461
Alignment:
Q  131 aacttatgaaaacagcttctgacaattttcacaagcttttttcagcttattttcataagttctccaaaatagctta 206  Q
    ||||||||||||||||   |||||||||||| || ||| ||||| |||||||||||||||||| ||| ||||||||    
T  19214386 aacttatgaaaacagcaaatgacaattttcataaacttgtttcaacttattttcataagttctacaatatagctta 19214461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 169 - 240
Target Start/End: Complemental strand, 44822011 - 44821940
Alignment:
Q  169 ttttcagcttattttcataagttctccaaaatagcttacaaaaacagctaatatcatacacaaaaacaattt 240  Q
    |||||| ||||||||||||||||||||| |||||||||  ||||||||| ||| | || |||||||||||||    
T  44822011 ttttcaacttattttcataagttctccagaatagcttatgaaaacagcttataacttatacaaaaacaattt 44821940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 131 - 214
Target Start/End: Original strand, 45790406 - 45790488
Alignment:
Q  131 aacttatgaaaacagcttctgacaattttcacaagcttttttcagcttattttcataagttctccaaaatagcttacaaaaaca 214  Q
    |||||||||||| | ||| |||||||||| | |||||||| |||||||||||||||||||| ||||| |||| ||| |||||||    
T  45790406 aacttatgaaaataacttatgacaatttttaaaagctttt-tcagcttattttcataagttatccaatatagtttataaaaaca 45790488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 164 - 266
Target Start/End: Complemental strand, 20269633 - 20269531
Alignment:
Q  164 agcttttttcagcttattttcataagttctccaaaatagcttacaaaaacagctaatatcatacacaaaaacaatttagcttcattttatctttctctat 263  Q
    ||||||||||| ||||||||||||| |||||||| | ||||||  |||||| || ||| |||  |||||||||||||| |||  ||||||||||  ||||    
T  20269633 agcttttttcaacttattttcataaattctccaatacagcttagtaaaacaacttataacatttacaaaaacaatttaactttgttttatcttttgctat 20269534  T
Q  264 aaa 266  Q
    |||    
T  20269533 aaa 20269531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 175 - 241
Target Start/End: Original strand, 43694594 - 43694660
Alignment:
Q  175 gcttattttcataagttctccaaaatagcttacaaaaacagctaatatcatacacaaaaacaattta 241  Q
    ||||||||||||||||||| | | |||||||| |||||||||| ||| |||| ||||||||||||||    
T  43694594 gcttattttcataagttcttcgatatagcttataaaaacagcttatagcatatacaaaaacaattta 43694660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 140 - 266
Target Start/End: Complemental strand, 45264176 - 45264050
Alignment:
Q  140 aaacagcttctgacaattttcacaagcttttttcagcttattttcataagttctccaaaatagcttacaaaaacagctaatatcatacacaaaaacaatt 239  Q
    ||||||||| ||||||  ||||| || ||||||| |||||||||| |||||||||  | |||  | | ||||| |||| ||| |||| ||||||||||||    
T  45264176 aaacagcttatgacaaagttcacgagtttttttcggcttattttcctaagttctctgatatatatcataaaaatagcttatagcatatacaaaaacaatt 45264077  T
Q  240 tagcttcattttatctttctctataaa 266  Q
    || ||| |||| |||||| ||||||||    
T  45264076 taactttatttcatctttttctataaa 45264050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 131 - 236
Target Start/End: Complemental strand, 43648330 - 43648225
Alignment:
Q  131 aacttatgaaaacagcttctgacaattttcacaagcttttttcagcttattttcataagttctccaaaatagcttacaaaaacagctaatatcatacaca 230  Q
    ||||||||||||||  ||||||||   |||| ||| | |||||| ||||||||||||  |||||||| ||||||||  ||||||||| |||||||| ||     
T  43648330 aacttatgaaaacatattctgacatacttcataagttcttttcaacttattttcatattttctccaagatagcttatgaaaacagcttatatcatatacg 43648231  T
Q  231 aaaaca 236  Q
    ||||||    
T  43648230 aaaaca 43648225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 66 - 206
Target Start/End: Complemental strand, 25596187 - 25596048
Alignment:
Q  66 ggcctgtttggattggcttatttgagctcatctattagcataagtttagtgaaaccgtcatggaaaacttatgaaaacagcttctgacaattttcacaag 165  Q
    |||||||||||| || |||||||||||| |||||  ||||||||  | |||| |  || | ||||||| ||| |||||||||| |||||| || |  |||    
T  25596187 ggcctgtttggactgacttatttgagcttatctaccagcataagcattgtgagattgttagggaaaacctataaaaacagcttatgacaagttact-aag 25596089  T
Q  166 cttttttcagcttattttcataagttctccaaaatagctta 206  Q
     | |||||| |||||||||||||| ||||||| ||||||||    
T  25596088 ttgttttcaacttattttcataagctctccaagatagctta 25596048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 62 - 202
Target Start/End: Complemental strand, 33128910 - 33128772
Alignment:
Q  62 atatggcctgtttggattggcttatttgagctcatctattagcataagtttagtgaaaccgtcatggaaaacttatgaaaacagcttctgacaattttca 161  Q
    ||||||||||||||||||| |||||||||||| || |  || | ||||||| || | |  ||  ||| ||| |||||||||| |||  |||||||||| |    
T  33128910 atatggcctgtttggattgacttatttgagcttatatgctaacttaagttttgtaagattgtt-tgggaaagttatgaaaactgctgatgacaatttt-a 33128813  T
Q  162 caagcttttttcagcttattttcataagttctccaaaatag 202  Q
     |||||||||| |||||||||||| ||||||||||| ||||    
T  33128812 taagctttttttagcttattttcacaagttctccaatatag 33128772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 132 - 172
Target Start/End: Original strand, 34464202 - 34464242
Alignment:
Q  132 acttatgaaaacagcttctgacaattttcacaagctttttt 172  Q
    ||||||||||||||||| |||||||||||||||||||||||    
T  34464202 acttatgaaaacagcttatgacaattttcacaagctttttt 34464242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 150 - 193
Target Start/End: Original strand, 3928009 - 3928052
Alignment:
Q  150 tgacaattttcacaagcttttttcagcttattttcataagttct 193  Q
    |||||||||||| |||||||||||| ||||||||||||||||||    
T  3928009 tgacaattttcataagcttttttcaacttattttcataagttct 3928052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 131 - 206
Target Start/End: Complemental strand, 5947274 - 5947199
Alignment:
Q  131 aacttatgaaaacagcttctgacaattttcacaagcttttttcagcttattttcataagttctccaaaatagctta 206  Q
    ||||| ||||| |||||| || || |||||| ||||| |||||||||||||||||||| |||||| | ||||||||    
T  5947274 aacttttgaaaccagcttatggcatttttcataagctcttttcagcttattttcataacttctcctagatagctta 5947199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 74 - 257
Target Start/End: Complemental strand, 33678927 - 33678744
Alignment:
Q  74 tggattggcttatttgagctcatctattagcataagtttagtgaaaccgtcatggaaaacttatgaaaacagcttctgacaattttcacaagcttttttc 173  Q
    ||||||||||||||| | || ||||| | |||||||||| |||| ||  |   ||| |||||||||||||| ||| | ||| | ||||  || | |||||    
T  33678927 tggattggcttatttaaacttatctacttgcataagttttgtgagacaatttgggagaacttatgaaaacaacttataacattgttcatgagatgttttc 33678828  T
Q  174 agcttattttcataagttctccaaaatagcttacaaaaacagctaatatcatacacaaaaacaatttagcttcattttatcttt 257  Q
    | |||||||||| ||||| ||||| ||||||||  ||||||||| ||| | |  |||||||| ||||| ||| | |||||||||    
T  33678827 aacttattttcacaagttttccaagatagcttatgaaaacagcttatagcttttacaaaaaccatttaactttactttatcttt 33678744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 150 - 241
Target Start/End: Complemental strand, 45338519 - 45338429
Alignment:
Q  150 tgacaattttcacaagcttttttcagcttattttcataagttctccaaaatagcttacaaaaacagctaatatcatacacaaaaacaattta 241  Q
    |||||||||| |  || |||||||| ||||||||||| |||||||||| |||||||| ||||||| || | | |||| ||||||||||||||    
T  45338519 tgacaatttttattagtttttttcaacttattttcatcagttctccaatatagctta-aaaaacaacttacagcatatacaaaaacaattta 45338429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 152 - 254
Target Start/End: Original strand, 15309567 - 15309668
Alignment:
Q  152 acaattttcacaagcttttttcagcttattttcataagttctccaaaatagcttacaaaaacagctaatatcatacacaaaaacaatttagcttcatttt 251  Q
    |||||||||| | ||||||| || ||||||||||||| |||||| ||||| ||||  |||||| || | | |||| |||||||||||||| ||| |||||    
T  15309567 acaattttcatatgctttttgca-cttattttcataaattctccgaaataacttatgaaaacaacttaaaacatatacaaaaacaatttaactttatttt 15309665  T
Q  252 atc 254  Q
    |||    
T  15309666 atc 15309668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 66 - 112
Target Start/End: Original strand, 40252038 - 40252084
Alignment:
Q  66 ggcctgtttggattggcttatttgagctcatctattagcataagttt 112  Q
    |||||||||| ||||||||||||||||| ||||| ||||||||||||    
T  40252038 ggcctgtttgaattggcttatttgagcttatctactagcataagttt 40252084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 66 - 206
Target Start/End: Complemental strand, 36517732 - 36517594
Alignment:
Q  66 ggcctgtttggattggcttatttgagctcatctattagcataagtttagtgaaaccgtcatggaaaacttatgaaaacagcttctgacaattttcacaag 165  Q
    ||||||||||||||   ||||||||||| | ||| | ||||||||||  | | || ||   ||| ||||||| ||||||||||  |||| | |||| |||    
T  36517732 ggcctgtttggattcatttatttgagcttagctactggcataagttttctaagactgtttgggagaacttattaaaacagctt--gacattgttcataag 36517635  T
Q  166 cttttttcagcttattttcataagttctccaaaatagctta 206  Q
    || ||||||| |||||||||||| |||||||| ||||||||    
T  36517634 ctattttcagtttattttcataatttctccaagatagctta 36517594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 140 - 192
Target Start/End: Complemental strand, 20428555 - 20428503
Alignment:
Q  140 aaacagcttctgacaattttcacaagcttttttcagcttattttcataagttc 192  Q
    ||||||||| ||||| || ||| |||||||||||||||||||||| |||||||    
T  20428555 aaacagcttatgacagttctcataagcttttttcagcttattttcgtaagttc 20428503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 73 - 148
Target Start/End: Complemental strand, 32410688 - 32410612
Alignment:
Q  73 ttggattggcttatttgagctcatctattagcataag-tttagtgaaaccgtcatggaaaacttatgaaaacagctt 148  Q
    ||||||||||||||||||||| ||||||| |||||||  || ||||||| ||  || | ||||||||||||||||||    
T  32410688 ttggattggcttatttgagcttatctattggcataagcatttgtgaaactgttttgaataacttatgaaaacagctt 32410612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 66 - 240
Target Start/End: Original strand, 4970707 - 4970882
Alignment:
Q  66 ggcctgtttggattggcttatttgagctcatctattagcataagtttagtgaaaccgtcatggaaaacttatgaaaacagcttctgacaattttcacaag 165  Q
    ||||||||||||||| |||||||||||| ||||  |  ||||||| | |||| || ||   ||| |||||||||||||| ||| || ||||||||| ||     
T  4970707 ggcctgtttggattgacttatttgagcttatctcgtgacataagtcttgtgagactgtttgggagaacttatgaaaacaacttatggcaattttcaaaaa 4970806  T
Q  166 ctttt-ttcagcttattttcataagttctccaaaatagcttacaaaaacagctaatatcatacacaaaaacaattt 240  Q
          ||||| |||||||||||||||||| || ||| |||| ||||| | || ||| |||| |||||||||||||    
T  4970807 aaaaaattcagtttattttcataagttctctaatatatcttataaaaagaacttatagcatatacaaaaacaattt 4970882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 163 - 222
Target Start/End: Complemental strand, 6601425 - 6601366
Alignment:
Q  163 aagcttttttcagcttattttcataagttctccaaaatagcttacaaaaacagctaatat 222  Q
    ||||| || ||||||||||||||||||  ||||| ||||||||| |||||||||| ||||    
T  6601425 aagctattctcagcttattttcataagcactccagaatagcttataaaaacagcttatat 6601366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 83 - 214
Target Start/End: Complemental strand, 21196406 - 21196276
Alignment:
Q  83 ttatttgagctcatctattagcataagtttagtgaaaccgtcatggaaaacttatgaaaacagcttctgacaattttcacaagcttttttcagcttattt 182  Q
    ||||||||||| || || |||||||||||| |||| || ||   | | || ||||| ||||||||  |||||||||||| | |||||||| | |||||||    
T  21196406 ttatttgagcttatatactagcataagttttgtgagactgtttagaagaatttatgcaaacagcta-tgacaattttcatatgctttttttaacttattt 21196308  T
Q  183 tcataagttctccaaaatagcttacaaaaaca 214  Q
    || |||||||| ||| | |||||| |||||||    
T  21196307 tcttaagttctgcaataaagcttataaaaaca 21196276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 131 - 194
Target Start/End: Complemental strand, 39968010 - 39967947
Alignment:
Q  131 aacttatgaaaacagcttctgacaattttcacaagcttttttcagcttattttcataagttctc 194  Q
    |||||||||||||||||| || || | |||| ||||| |||||| ||||||||||| |||||||    
T  39968010 aacttatgaaaacagcttatggcattgttcataagctgttttcaacttattttcattagttctc 39967947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 168 - 257
Target Start/End: Complemental strand, 48507776 - 48507685
Alignment:
Q  168 tttttcagcttattttcataagttctccaa-aatagcttacaaaaacagctaatatcatacacaaaaacaatttagcttcatt-ttatcttt 257  Q
    |||||||||||| |||||||||||||| ||  || |||||  ||||||| | ||| |||| |||||||||||||| ||||||| ||||||||    
T  48507776 tttttcagcttaatttcataagttctctaaggatggcttatgaaaacagtttatagcatatacaaaaacaatttaacttcattcttatcttt 48507685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 169 - 215
Target Start/End: Complemental strand, 7244732 - 7244686
Alignment:
Q  169 ttttcagcttattttcataagttctccaaaatagcttacaaaaacag 215  Q
    ||||||||||||||||||||| ||||||| ||||||||  |||||||    
T  7244732 ttttcagcttattttcataagctctccaatatagcttatgaaaacag 7244686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 131 - 217
Target Start/End: Original strand, 20526909 - 20526995
Alignment:
Q  131 aacttatgaaaacagcttctgacaattttcacaagcttttttcagcttattttcataagttctccaaaatagcttacaaaaacagct 217  Q
    |||| ||||||||||||| ||| | | || | ||| | ||||||||||||||||||||||||| ||  ||||||||  |||||||||    
T  20526909 aactgatgaaaacagcttatgagattgtttataagatcttttcagcttattttcataagttctacactatagcttatgaaaacagct 20526995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 163 - 257
Target Start/End: Original strand, 22283756 - 22283850
Alignment:
Q  163 aagcttttttcagcttattttcataagttctccaaaatagcttacaaaaacagctaatatcatacacaaaaacaatttagcttcattttatcttt 257  Q
    ||||| |||||||||||||| ||||||||||| || || | |||  ||||||| | ||| |  | |||||||||||||| ||| |||||||||||    
T  22283756 aagctgttttcagcttatttccataagttctctaagatggtttatgaaaacagtttatagctgatacaaaaacaatttaactttattttatcttt 22283850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 70 - 112
Target Start/End: Original strand, 34083527 - 34083569
Alignment:
Q  70 tgtttggattggcttatttgagctcatctattagcataagttt 112  Q
    ||||||||||| |||||||||||||||||| | ||||||||||    
T  34083527 tgtttggattgacttatttgagctcatctacttgcataagttt 34083569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 132 - 206
Target Start/End: Original strand, 43250681 - 43250754
Alignment:
Q  132 acttatgaaaacagcttctgacaattttcacaagcttttttcagcttattttcataagttctccaaaatagctta 206  Q
    ||||||||||||||||| ||||| | |||  ||| | ||||||| |||| |||||||| ||||||||||||||||    
T  43250681 acttatgaaaacagcttatgaca-tgttcgtaagttgttttcagtttatattcataagctctccaaaatagctta 43250754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 169 - 206
Target Start/End: Original strand, 28128413 - 28128450
Alignment:
Q  169 ttttcagcttattttcataagttctccaaaatagctta 206  Q
    |||||||||||||| ||||| |||||||||||||||||    
T  28128413 ttttcagcttatttccataaattctccaaaatagctta 28128450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 169 - 298
Target Start/End: Complemental strand, 33673129 - 33673001
Alignment:
Q  169 ttttcagcttattttcataagttctccaaaatagcttacaaaaacagctaatatcatacacaaaaacaatttagcttcattttatctttctctataaaga 268  Q
    |||||||||| |||| |||| |||||||| ||||||||   |||||||| ||| | || ||||| | ||||||  || |||||||| ||  ||||| |      
T  33673129 ttttcagcttgtttttataaattctccaatatagcttatggaaacagcttatagcttatacaaatataatttaagtt-attttatcctttgctatagaag 33673031  T
Q  269 tagcttatgtataagcgcttatcataataa 298  Q
    ||||||||  ||||||||||||||||||||    
T  33673030 tagcttatacataagcgcttatcataataa 33673001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 164 - 241
Target Start/End: Complemental strand, 39907860 - 39907783
Alignment:
Q  164 agcttttttcagcttattttcataagttctccaaaatagcttacaaaaacagctaatatcatacacaaaaacaattta 241  Q
    |||| |||||||||||||||||| ||||||| || |||| |||  ||||||| | ||| | || ||||||||||||||    
T  39907860 agctgttttcagcttattttcattagttctctaagatagtttatgaaaacagtttatagcttatacaaaaacaattta 39907783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 158 - 218
Target Start/End: Complemental strand, 529438 - 529378
Alignment:
Q  158 ttcacaagcttttttcagcttattttcataagttctccaaaatagcttacaaaaacagcta 218  Q
    |||| ||||| |||||| | |||||||||||| ||||||| ||||||||  ||||||||||    
T  529438 ttcataagctgttttcaacatattttcataagctctccaagatagcttatgaaaacagcta 529378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 131 - 194
Target Start/End: Original strand, 3308231 - 3308295
Alignment:
Q  131 aacttatgaaaacagcttctgacaattt-tcacaagcttttttcagcttattttcataagttctc 194  Q
    ||||| |||||| ||||| || || ||| ||| ||||||||||||||||||||| ||||||||||    
T  3308231 aacttttgaaaatagcttatgccattttctcataagcttttttcagcttattttaataagttctc 3308295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 167 - 215
Target Start/End: Complemental strand, 9050689 - 9050641
Alignment:
Q  167 ttttttcagcttattttcataagttctccaaaatagcttacaaaaacag 215  Q
    ||||||||||||||||||| ||||||||||| |||| |||  |||||||    
T  9050689 ttttttcagcttattttcacaagttctccaagatagtttatgaaaacag 9050641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 178 - 266
Target Start/End: Original strand, 11700293 - 11700381
Alignment:
Q  178 tattttcataagttctccaaaatagcttacaaaaacagctaatatcatacacaaaaacaatttagcttcattttatctttctctataaa 266  Q
    ||||||||||||||||| ||  ||||||| ||||  |||| ||  |||| | ||||||||| || ||| ||||||||||| ||||||||    
T  11700293 tattttcataagttctcaaatttagcttataaaagaagcttattgcatatataaaaacaatgtaactttattttatctttttctataaa 11700381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 150 - 194
Target Start/End: Original strand, 28341056 - 28341099
Alignment:
Q  150 tgacaattttcacaagcttttttcagcttattttcataagttctc 194  Q
    |||||||||||| ||||||||| ||||||| ||||||||||||||    
T  28341056 tgacaattttcaaaagctttttccagctta-tttcataagttctc 28341099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 169 - 217
Target Start/End: Original strand, 47559619 - 47559667
Alignment:
Q  169 ttttcagcttattttcataagttctccaaaatagcttacaaaaacagct 217  Q
    ||||| ||| ||||||||||||||||||||||| ||||  |||||||||    
T  47559619 ttttcggctcattttcataagttctccaaaataacttatgaaaacagct 47559667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 72; Significance: 1e-32; HSPs: 79)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 67 - 214
Target Start/End: Complemental strand, 54426197 - 54426050
Alignment:
Q  67 gcctgtttggattggcttatttgagctcatctattagcataagtttagtgaaaccgtcatggaaaacttatgaaaacagcttctgacaattttcacaagc 166  Q
    ||||||||||||||||||||||||||| ||||| | |||||||||| |||| || |    ||| |||||| ||||||||||| |||||||||||| ||||    
T  54426197 gcctgtttggattggcttatttgagcttatctactggcataagttttgtgagactgcttgggagaacttaggaaaacagcttatgacaattttcataagc 54426098  T
Q  167 ttttttcagcttattttcataagttctccaaaatagcttacaaaaaca 214  Q
    ||||||||  ||||||||||||||||||||| |||| ||| |||||||    
T  54426097 ttttttcaagttattttcataagttctccaatatagattataaaaaca 54426050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 66 - 253
Target Start/End: Original strand, 17822780 - 17822967
Alignment:
Q  66 ggcctgtttggattggcttatttgagctcatctattagcataagtttagtgaaaccgtcatggaaaacttatgaaaacagcttctgacaattttcacaag 165  Q
    ||||||||||||||  |||||||||||| ||||| |  ||||||||  |||| ||  |   ||| ||| |||||||||||||| ||||| |||||| |||    
T  17822780 ggcctgtttggattaacttatttgagcttatctactgacataagttctgtgagactatttaggagaacatatgaaaacagcttatgacatttttcataag 17822879  T
Q  166 cttttttcagcttattttcataagttctccaaaatagcttacaaaaacagctaatatcatacacaaaaacaatttagcttcattttat 253  Q
    ||||||| |||||||||||||||||||||||| ||||||||  |||||| || ||| |||| | || ||||||||| ||| |||||||    
T  17822880 ctttttttagcttattttcataagttctccaagatagcttatgaaaacaacttatagcatataaaataacaatttaacttaattttat 17822967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 64 - 212
Target Start/End: Original strand, 26778 - 26925
Alignment:
Q  64 atggcctgtttggattggcttatttgagctcatctattagcataagtttagtgaaaccgtcatggaaaacttatgaaaacagcttctgacaattttcaca 163  Q
    |||||||||||||||||||||||||||||| ||| | | ||||||| || || | || ||    || || ||||||||||||||| |||||| |||||||    
T  26778 atggcctgtttggattggcttatttgagcttatcaactggcataagctttgttagactgtttccgagaaattatgaaaacagcttatgacaaatttcaca 26877  T
Q  164 agcttttttcagcttattttcataagttctccaaaatagcttacaaaaa 212  Q
    |||||||| ||| ||||||||||||||||||||| |||||||| |||||    
T  26878 agcttttt-cagattattttcataagttctccaatatagcttataaaaa 26925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 131 - 279
Target Start/End: Original strand, 50681069 - 50681217
Alignment:
Q  131 aacttatgaaaacagcttctgacaattttcacaagcttttttcagcttattttcataagttctccaaaatagcttacaaaaacagctaatatcatacaca 230  Q
    ||||||||||||||| |  |||||||||||| ||||||||||||  |||||||||||| |||||||| |||||||| | ||||| || ||| |||| |||    
T  50681069 aacttatgaaaacagttaatgacaattttcataagcttttttcaatttattttcataatttctccaatatagcttatataaacaacttatagcatataca 50681168  T
Q  231 aaaacaatttagcttcattttatctttctctataaagatagcttatgta 279  Q
    ||||||||||| | | ||||||||||   ||||||| ||||||| ||||    
T  50681169 aaaacaatttaacattattttatcttatcctataaaaatagcttttgta 50681217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 66 - 206
Target Start/End: Complemental strand, 55302404 - 55302264
Alignment:
Q  66 ggcctgtttggattggcttatttgagctcatctattagcataagtttagtgaaaccgtcatggaaaacttatgaaaacagcttctgacaattttcacaag 165  Q
    |||||||| ||||| |||||||| |||| ||||| | |||||||||| ||||  | ||   |||||||||||  ||||||||| |||||||||||  |||    
T  55302404 ggcctgttaggatttgcttattttagcttatctaatggcataagttttgtgagcctgttccggaaaacttatagaaacagcttatgacaattttcgtaag 55302305  T
Q  166 cttttttcagcttattttcataagttctccaaaatagctta 206  Q
    |||||||||||||||||||||||||| ||||| ||||||||    
T  55302304 cttttttcagcttattttcataagttttccaacatagctta 55302264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 66 - 237
Target Start/End: Original strand, 21731571 - 21731742
Alignment:
Q  66 ggcctgtttggattggcttatttgagctcatctattagcataagtttagtgaaaccgtcatggaaaacttatgaaaacagcttctgacaattttcacaag 165  Q
    |||||||||||||||| ||||||||||  ||||| |  ||||||||| |||| |  ||   ||| |||||||||||||||||| | |||||||||| ||     
T  21731571 ggcctgtttggattggtttatttgagcatatctactgacataagttttgtgagattgtttgggagaacttatgaaaacagcttatcacaattttcataaa 21731670  T
Q  166 cttttttcagcttattttcataagttctccaaaatagcttacaaaaacagctaatatcatacacaaaaacaa 237  Q
    ||||||||| |||| |||||||| |||||||| |||||||| ||||||| || ||| || | ||||||||||    
T  21731671 cttttttcaacttactttcataaattctccaatatagcttataaaaacaacttatagcacatacaaaaacaa 21731742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 70 - 277
Target Start/End: Complemental strand, 41336911 - 41336705
Alignment:
Q  70 tgtttggattggcttatttgagctcatctattagcataagtttagtgaaaccgtcatggaaaacttatgaaaacagcttctgacaattttcacaagcttt 169  Q
    ||||||||||| |||||||||| | ||||| |  ||||||||| |||| |  || | | | |||||| ||||||||||| ||||| |||||| |||||||    
T  41336911 tgtttggattgacttatttgagtttatctactcacataagttttgtgagatagttaggaagaacttaagaaaacagcttatgacagttttcataagcttt 41336812  T
Q  170 tttcagcttattttcataagttctccaaaatagcttacaaaaacagctaatatcatacacaaaaacaatttagcttcattttatctttctctataaagat 269  Q
    ||||| ||||||||| ||| |||| ||   ||||||| |||||||  | ||| |||| |||||||||||||| ||| |||||||||||  ||||||| ||    
T  41336811 tttcaacttattttcgtaaattcttcaccctagcttagaaaaacaatttataacatatacaaaaacaatttaactttattttatcttt-gctataaaaat 41336713  T
Q  270 agcttatg 277  Q
    ||||||||    
T  41336712 agcttatg 41336705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 131 - 257
Target Start/End: Complemental strand, 20109099 - 20108973
Alignment:
Q  131 aacttatgaaaacagcttctgacaattttcacaagcttttttcagcttattttcataagttctccaaaatagcttacaaaaacagctaatatcatacaca 230  Q
    |||||||||||||| ||| ||| || |||||||||||||||||  || ||||||| |||||||| || ||| |||| |||||||||| ||| |||| |||    
T  20109099 aacttatgaaaacaccttgtgaaaaatttcacaagcttttttcgactcattttcaaaagttctctaatatatcttataaaaacagcttataccatataca 20109000  T
Q  231 aaaacaatttagcttcattttatcttt 257  Q
    ||||||| ||| |||||||||||||||    
T  20108999 aaaacaacttaacttcattttatcttt 20108973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 72 - 278
Target Start/End: Complemental strand, 22030352 - 22030147
Alignment:
Q  72 tttggattggcttatttgagctcatctattagcataagtttagtgaaaccgtcatggaaaacttatgaaaacagcttctgacaattttcacaagcttttt 171  Q
    |||| |||| ||||||||||||  ||||||||||||||||| ||||  |  |   ||| |||||||||||||||||| |||||||||||| ||||||||     
T  22030352 tttgtattgacttatttgagcttgtctattagcataagttttgtgagcctatttgggagaacttatgaaaacagcttatgacaattttcaaaagcttttc 22030253  T
Q  172 tcagcttattttcataagttctccaaaatagcttacaaaaacagctaatatcatacacaaaaacaatttagcttcattttatctttctctataaagatag 271  Q
    |||| |||||||||||||||||| ||  || |||  || |||| || ||| |||| ||||||| ||| || ||| |||||||| || |||||| | ||||    
T  22030252 tcaggttattttcataagttctctaatttaacttgtaagaacaacttatagcatatacaaaaataatataactttattttatcctt-tctatagaaatag 22030154  T
Q  272 cttatgt 278  Q
    |||||||    
T  22030153 cttatgt 22030147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 69 - 205
Target Start/End: Original strand, 13126494 - 13126630
Alignment:
Q  69 ctgtttggattggcttatttgagctcatctattagcataagtttagtgaaaccgtcatggaa-aacttatgaaaacagcttctgacaattttcacaagct 167  Q
    |||||||||||||||||||| |||| | ||| || ||||||||| |||| || ||  ||||| ||||||| |||||||||| ||||| || ||| |||||    
T  13126494 ctgtttggattggcttattttagcttacctactaacataagttttgtgagactgtt-tggaagaacttataaaaacagcttatgacatttatcataagct 13126592  T
Q  168 tttttcagcttattttcataagttctccaaaatagctt 205  Q
    ||||||||||||||||||||||||||| || |||||||    
T  13126593 tttttcagcttattttcataagttctcgaagatagctt 13126630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 70 - 214
Target Start/End: Original strand, 39603090 - 39603233
Alignment:
Q  70 tgtttggattggcttatttgagctcatctattagcataagtttagtgaaaccgtcatggaaaacttatgaaaacagcttctgacaattttcacaagcttt 169  Q
    ||||||||||||||||||||||||  |||||| | |||||||| |||| || ||   ||| |||||| ||||||||||| |||||||||| | |||||||    
T  39603090 tgtttggattggcttatttgagctt-tctattggtataagttttgtgagactgtttgggagaacttaggaaaacagcttatgacaatttttataagcttt 39603188  T
Q  170 tttcagcttattttcataagttctccaaaatagcttacaaaaaca 214  Q
    ||| |  ||||||||||||||||||||| ||| |||| |||||||    
T  39603189 ttttaagttattttcataagttctccaatataccttataaaaaca 39603233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 134 - 240
Target Start/End: Original strand, 7839344 - 7839450
Alignment:
Q  134 ttatgaaaacagcttctgacaattttcacaagcttttttcagcttattttcataagttctccaaaatagcttacaaaaacagctaatatcatacacaaaa 233  Q
    ||||||||||| ||| |||||||||||| |||||||||||| ||||||||| |||||||| |||  ||||||| |||||||  | ||| |||| ||||||    
T  7839344 ttatgaaaacaacttatgacaattttcataagcttttttcaacttattttcgtaagttcttcaatctagcttataaaaacaatttatagcatatacaaaa 7839443  T
Q  234 acaattt 240  Q
    |||||||    
T  7839444 acaattt 7839450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 131 - 254
Target Start/End: Complemental strand, 55064925 - 55064800
Alignment:
Q  131 aacttatgaaaacagcttctgacaattttcacaagcttttttcagcttattttcataagttctccaaaatagc--ttacaaaaacagctaatatcataca 228  Q
    ||||| |||||||| ||| ||||| ||||||  ||||||||||| |||||||||||||||||||||| ||| |  |||  ||||||||  ||| ||||||    
T  55064925 aacttttgaaaacaacttatgacatttttcaatagcttttttcatcttattttcataagttctccaagataacatttatgaaaacagcatatagcataca 55064826  T
Q  229 caaaaacaatttagcttcattttatc 254  Q
    ||||||||||||| ||||||| ||||    
T  55064825 caaaaacaatttaacttcattatatc 55064800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 133 - 206
Target Start/End: Original strand, 25904205 - 25904278
Alignment:
Q  133 cttatgaaaacagcttctgacaattttcacaagcttttttcagcttattttcataagttctccaaaatagctta 206  Q
    |||||||||||||||| || || |||||| ||||||||||||||||||||| ||||||||||||||| ||||||    
T  25904205 cttatgaaaacagcttatgccatttttcataagcttttttcagcttatttttataagttctccaaaacagctta 25904278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 137 - 257
Target Start/End: Original strand, 55414406 - 55414526
Alignment:
Q  137 tgaaaacagcttctgacaattttcacaagcttttttcagcttattttcataagttctccaaaatagcttacaaaaacagctaatatcatacacaaaaaca 236  Q
    |||||||||||| ||||| |||||| |||||||||||| |||||||||||||||||||||| ||| ||||  ||||||  | ||| ||||  |||||| |    
T  55414406 tgaaaacagcttatgacatttttcataagcttttttcaacttattttcataagttctccaagataacttatgaaaacaatttatagcatatgcaaaaaaa 55414505  T
Q  237 atttagcttcattttatcttt 257  Q
    | ||| ||| |||||||||||    
T  55414506 aattaactttattttatcttt 55414526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 131 - 231
Target Start/End: Original strand, 50662718 - 50662818
Alignment:
Q  131 aacttatgaaaacagcttctgacaattttcacaagcttttttcagcttattttcataagttctccaaaatagcttacaaaaacagctaatatcatacaca 230  Q
    ||||||||||||||| |  |||||||||||| |||||||||||| |||||||||| || |||||||| |||||||| | ||||| || ||| |||| |||    
T  50662718 aacttatgaaaacagttaatgacaattttcataagcttttttcaacttattttcacaatttctccaatatagcttatataaacaacttatagcatataca 50662817  T
Q  231 a 231  Q
    |    
T  50662818 a 50662818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 139 - 206
Target Start/End: Complemental strand, 2244133 - 2244066
Alignment:
Q  139 aaaacagcttctgacaattttcacaagcttttttcagcttattttcataagttctccaaaatagctta 206  Q
    |||||||||| ||||||| |||| || ||||||||| |||||||||||||||||||||| ||||||||    
T  2244133 aaaacagcttatgacaatattcataaacttttttcaccttattttcataagttctccaatatagctta 2244066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 68 - 214
Target Start/End: Original strand, 40830947 - 40831092
Alignment:
Q  68 cctgtttggattggcttatttgagctcatctattagcataagtttagtgaaaccgtcatggaaaacttatga-aaacagcttctgacaattttcacaagc 166  Q
    |||||||||||||||| ||||||||| ||||||| |||||||||| |||| || ||   | | || |||||| |||||||||  ||||| ||| | ||||    
T  40830947 cctgtttggattggctaatttgagcttatctatt-gcataagttttgtgagactgttcggaagaaattatgagaaacagcttacgacaacttttataagc 40831045  T
Q  167 ttttttcagcttattttcataagttctccaaaatagcttacaaaaaca 214  Q
    |||||||| ||||||| ||||||||||||||  ||||||| |||||||    
T  40831046 ttttttcaacttattt-cataagttctccaatctagcttataaaaaca 40831092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 66 - 241
Target Start/End: Original strand, 53294029 - 53294204
Alignment:
Q  66 ggcctgtttggattggcttatttgagctcatctattagcataagtttagtgaaaccgtcatggaaaacttatgaaaacagcttctgacaattttcacaag 165  Q
    ||||||||||||||| || ||||| ||| ||||| |  ||| ||||| || | || ||   |||||||| |||||||||  || |||   |||||| |||    
T  53294029 ggcctgtttggattgactaatttgtgcttatctactgacatgagttttgtaagactgtttgggaaaactcatgaaaacaaattatgatggttttcaaaag 53294128  T
Q  166 cttttttcagcttattttcataagttctccaaaatagcttacaaaaacagctaatatcatacacaaaaacaattta 241  Q
    || |||||||||| ||||||||||||||| || |||| ||| ||||||| || ||| |||| ||||||||||||||    
T  53294129 ctattttcagcttgttttcataagttctctaatatagtttataaaaacaacttatagcatatacaaaaacaattta 53294204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 131 - 205
Target Start/End: Complemental strand, 29657474 - 29657400
Alignment:
Q  131 aacttatgaaaacagcttctgacaattttcacaagcttttttcagcttattttcataagttctccaaaatagctt 205  Q
    |||||||||||||||||| |||||||||||| |||| ||||| |||||| |||||||| ||||| || |||||||    
T  29657474 aacttatgaaaacagcttatgacaattttcaaaagcatttttgagcttaatttcataacttctctaatatagctt 29657400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 152 - 217
Target Start/End: Original strand, 437245 - 437310
Alignment:
Q  152 acaattttcacaagcttttttcagcttattttcataagttctccaaaatagcttacaaaaacagct 217  Q
    ||||||||| ||||||||| ||||||||||||||||| |||||||| |||| ||| ||||||||||    
T  437245 acaattttcccaagcttttctcagcttattttcataaattctccaatatagtttataaaaacagct 437310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 69 - 238
Target Start/End: Original strand, 35571549 - 35571718
Alignment:
Q  69 ctgtttggattggcttatttgagctcatctattagcataagtttagtgaaaccgtcatggaaaacttatgaaaacagcttctgacaattttcacaagctt 168  Q
    ||||||||||||||||||||||||| ||||| |||||||||||| |||  |  ||   ||| ||||| | |||||||||| | ||| | ||||  ||||     
T  35571549 ctgtttggattggcttatttgagcttatctactagcataagttttgtgggatagtttgggagaacttttaaaaacagcttattacactgttcatgagctg 35571648  T
Q  169 ttttcagcttattttcataagttctccaaaatagcttacaaaaacagctaatatcatacacaaaaacaat 238  Q
     ||||| |||||||||| |||||||| || ||||||||  ||||||||| ||| | || || ||||||||    
T  35571649 gtttcaacttattttcacaagttctctaagatagcttatgaaaacagcttatagcttatacgaaaacaat 35571718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 177 - 277
Target Start/End: Complemental strand, 9760484 - 9760384
Alignment:
Q  177 ttattttcataagttctccaaaatagcttacaaaaacagctaatatcatacacaaaaacaatttagcttcattttatctttctctataaagatagcttat 276  Q
    ||||||||||||||||||||| |||||||| ||||||| || ||| ||||   ||||| |||||| ||| ||||||||||| || ||||| ||| |||||    
T  9760484 ttattttcataagttctccaatatagcttataaaaacaacttatagcatattaaaaaagaatttaactttattttatctttttcaataaaaataacttat 9760385  T
Q  277 g 277  Q
    |    
T  9760384 g 9760384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 169 - 257
Target Start/End: Complemental strand, 17884120 - 17884032
Alignment:
Q  169 ttttcagcttattttcataagttctccaaaatagcttacaaaaacagctaatatcatacacaaaaacaatttagcttcattttatcttt 257  Q
    ||||||||| ||||||||||| ||||||| ||||||||  |||||| || ||| | || |||||||||||||| ||| |||||||||||    
T  17884120 ttttcagctaattttcataagctctccaatatagcttatgaaaacaactgataacttatacaaaaacaatttaactttattttatcttt 17884032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 137 - 257
Target Start/End: Original strand, 54069403 - 54069523
Alignment:
Q  137 tgaaaacagcttctgacaattttcacaagcttttttcagcttattttcataagttctccaaaatagcttacaaaaacagctaatatcatacacaaaaaca 236  Q
    ||||||||||||   |||||||||| ||||| |||| | |||||||||||| ||||| ||| ||| |||| |||||||  | ||| |||| |||||||||    
T  54069403 tgaaaacagcttacaacaattttcataagctgtttttaacttattttcatatgttcttcaatataacttataaaaacaaattatagcatatacaaaaaca 54069502  T
Q  237 atttagcttcattttatcttt 257  Q
    ||||| | | |||||||||||    
T  54069503 atttaacattattttatcttt 54069523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 70 - 205
Target Start/End: Complemental strand, 24169414 - 24169279
Alignment:
Q  70 tgtttggattggcttatttgagctcatctattagcataagtttagtgaaaccgtcatggaaaacttatgaaaacagcttctgacaattttcacaagcttt 169  Q
    |||||||||||||||||| ||| | ||||| | |||||||||| |||| ||  |    || ||||| | |||| ||||| ||||| |||||| ||| |||    
T  24169414 tgtttggattggcttattagagtttatctactggcataagttttgtgagactatttgagagaacttttaaaaatagcttatgacatttttcataagattt 24169315  T
Q  170 tttcagcttattttcataagttctccaaaatagctt 205  Q
    ||||| |||||||||||||| ||||||| |||||||    
T  24169314 tttcaacttattttcataagctctccaagatagctt 24169279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 169 - 206
Target Start/End: Original strand, 825508 - 825545
Alignment:
Q  169 ttttcagcttattttcataagttctccaaaatagctta 206  Q
    ||||||||||||||||||||||||||||||||||||||    
T  825508 ttttcagcttattttcataagttctccaaaatagctta 825545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 163 - 236
Target Start/End: Original strand, 16199993 - 16200066
Alignment:
Q  163 aagcttttttcagcttattttcataagttctccaaaatagcttacaaaaacagctaatatcatacacaaaaaca 236  Q
    |||| ||||| ||||||||||||||||| |||||| ||||||||  ||||||||| ||| |||| |||||||||    
T  16199993 aagccttttttagcttattttcataagtcctccaagatagcttatgaaaacagcttatagcatatacaaaaaca 16200066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 128 - 197
Target Start/End: Complemental strand, 44138652 - 44138583
Alignment:
Q  128 gaaaacttatgaaaacagcttctgacaattttcacaagcttttttcagcttattttcataagttctccaa 197  Q
    ||||||||||||| | | ||| ||||| | |||||||||  |||||||||||||||||||||||||||||    
T  44138652 gaaaacttatgaagataacttatgacattattcacaagcaattttcagcttattttcataagttctccaa 44138583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 131 - 212
Target Start/End: Original strand, 46588053 - 46588134
Alignment:
Q  131 aacttatgaaaacagcttctgacaattttcacaagcttttttcagcttattttcataagttctccaaaatagcttacaaaaa 212  Q
    |||||| ||||| | ||| |||||||||||| |||| |||| || |||||||||||||||||||||| ||| |||| |||||    
T  46588053 aacttacgaaaataacttatgacaattttcataagccttttccaacttattttcataagttctccaatataacttataaaaa 46588134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 169 - 250
Target Start/End: Original strand, 54392837 - 54392918
Alignment:
Q  169 ttttcagcttattttcataagttctccaaaatagcttacaaaaacagctaatatcatacacaaaaacaatttagcttcattt 250  Q
    |||||| |||||||||| || |||||||| ||| ||||  ||||||||||||| |||| |||||||||||||| ||| ||||    
T  54392837 ttttcaacttattttcaaaatttctccaagatatcttattaaaacagctaatagcatatacaaaaacaatttaactttattt 54392918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 138 - 241
Target Start/End: Complemental strand, 1408040 - 1407936
Alignment:
Q  138 gaaaacagcttctgacaattttcacaagct-tttttcagcttattttcataagttctccaaaatagcttacaaaaacagctaatatcatacacaaaaaca 236  Q
    ||||||||||| ||||| |||||| ||||| ||||||||||||| ||||||| || ||| | ||||||||  |||||||||   | | ||||||||||||    
T  1408040 gaaaacagcttatgacatttttcataagctgtttttcagcttatcttcataaattttcctagatagcttatgaaaacagcttgcagcttacacaaaaaca 1407941  T
Q  237 attta 241  Q
    |||||    
T  1407940 attta 1407936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 126 - 214
Target Start/End: Original strand, 30668342 - 30668429
Alignment:
Q  126 tggaaaacttatgaaaacagcttctgacaattttcacaagcttttttcagcttattttcataagttctccaaaatagcttacaaaaaca 214  Q
    |||| ||||| |||||||||||| ||||| |||||| |||| |||||||||||| ||||||||  | ||||| |||||||| |||||||    
T  30668342 tggagaacttgtgaaaacagcttatgacacttttcataagc-tttttcagcttaatttcataaactatccaagatagcttataaaaaca 30668429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 150 - 273
Target Start/End: Original strand, 46592208 - 46592332
Alignment:
Q  150 tgacaattttcacaagcttttttcagcttattttcataagttctccaaaatagctta-caaaaacagctaatatcatacacaaaaacaatttagcttcat 248  Q
    |||||||||||| |||| |||| || |||||||||||||||||||||| ||| ||||  ||||||| || ||| |||| | |||| ||||||| | ||||    
T  46592208 tgacaattttcataagccttttccaacttattttcataagttctccaatataacttataaaaaacaacttataacatatataaaatcaatttaccgtcat 46592307  T
Q  249 tttatctttctctataaagatagct 273  Q
    || || |||  ||||||| ||||||    
T  46592308 ttaattttttgctataaaaatagct 46592332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 134 - 293
Target Start/End: Complemental strand, 1706709 - 1706550
Alignment:
Q  134 ttatgaaaacagcttctgacaattttcacaagcttttttcagcttattttcataagttctccaaaatagcttacaaaaacagctaatatcatacacaaaa 233  Q
    ||||||||||||||| || || | |||| ||||| ||| || |||||||||||||| | ||||| |||| |||  ||||||||| ||| | |  || |||    
T  1706709 ttatgaaaacagcttatggcattgttcataagctatttccaacttattttcataagctgtccaagatagtttatgaaaacagcttatagcttctacgaaa 1706610  T
Q  234 acaatttagcttcattttatctttctctataaagatagcttatgtataagcgcttatcat 293  Q
    |||||| | | | |||||| |||| |||||||| ||||||| |  |||||| ||||||||    
T  1706609 acaattgaacattattttaactttttctataaaaatagcttctacataagcacttatcat 1706550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 169 - 276
Target Start/End: Complemental strand, 3155655 - 3155548
Alignment:
Q  169 ttttcagcttattttcataagttctccaaaatagcttacaaaaacagctaatatcatacacaaaaacaatttagcttcattttatctttctctataaaga 268  Q
    |||||||||||||||||| |||||| ||| |||| |||  |||||||||  || | |  |||||||||||||| ||| |||||||||||  ||||| | |    
T  3155655 ttttcagcttattttcattagttcttcaagatagtttatgaaaacagcttgtagcttgtacaaaaacaatttaactttattttatcttttgctatagaaa 3155556  T
Q  269 tagcttat 276  Q
    ||||||||    
T  3155555 tagcttat 3155548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 66 - 117
Target Start/End: Complemental strand, 18815178 - 18815127
Alignment:
Q  66 ggcctgtttggattggcttatttgagctcatctattagcataagtttagtga 117  Q
    |||||||||||||||||||||||||||| | ||| |||||||||||| ||||    
T  18815178 ggcctgtttggattggcttatttgagcttacctactagcataagttttgtga 18815127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 69 - 234
Target Start/End: Original strand, 49940085 - 49940252
Alignment:
Q  69 ctgtttggattggcttatttgagctcatctattagcataagtttagtgaaaccgtcatggaaaacttatgaaaacagctt-ctgacaattttcacaagct 167  Q
    |||||||||||| |||||||||||| | ||  || ||||||||| |||| || ||    || ||||||||||||||||||   || |||||| |||||||    
T  49940085 ctgtttggattgacttatttgagcttacctgctaacataagttttgtgagactgtttgagagaacttatgaaaacagcttaaagataattttaacaagct 49940184  T
Q  168 tttt-tcagcttattttcataagttctccaaaatagcttacaaaaacagctaatatcatacacaaaaa 234  Q
    |||| |  |||||||| | |||||||||| |  ||||||| |||||||||| ||| |||| |||||||    
T  49940185 ttttattggcttatttccgtaagttctccgatgtagcttataaaaacagcttatagcatatacaaaaa 49940252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 169 - 300
Target Start/End: Complemental strand, 51630163 - 51630032
Alignment:
Q  169 ttttcagcttattttcataagttctccaaaatagcttacaaaaacagctaatatcatacacaaaaacaatttagcttcattttatctttctctataaaga 268  Q
    |||||||||||||||||||| |||| ||| ||||||||  |||| |||| ||| | || |  ||||||||||| ||| |||||||||||  ||||| | |    
T  51630163 ttttcagcttattttcataaattcttcaagatagcttatgaaaatagcttatagcttatatcaaaacaatttaactttattttatcttttgctatataaa 51630064  T
Q  269 tagcttatgtataagcgcttatcataataagc 300  Q
    ||||||    | ||| ||||||||||||||||    
T  51630063 tagcttgaacacaagtgcttatcataataagc 51630032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 158 - 257
Target Start/End: Original strand, 52746847 - 52746946
Alignment:
Q  158 ttcacaagcttttttcagcttattttcataagttctccaaaatagcttacaaaaacagctaatatcatacacaaaaacaatttagcttcattttatcttt 257  Q
    |||| ||||| ||||||||| |||||||||||   | ||| ||||||||  ||||||||| ||  | ||||||||||||||||| ||| |||||||||||    
T  52746847 ttcataagctgttttcagctgattttcataagccttacaagatagcttatgaaaacagcttatggcttacacaaaaacaatttaactttattttatcttt 52746946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 131 - 206
Target Start/End: Complemental strand, 56249613 - 56249539
Alignment:
Q  131 aacttatgaaaacagcttctgacaattttcacaagcttttttcagcttattttcataagttctccaaaatagctta 206  Q
    ||||||| |||||||||| ||||| |||||| |||||||||||| ||||||||| ||||| ||||||  |||||||    
T  56249613 aacttatcaaaacagcttatgaca-ttttcataagcttttttcaacttattttcttaagtcctccaatgtagctta 56249539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 67 - 213
Target Start/End: Complemental strand, 29388768 - 29388622
Alignment:
Q  67 gcctgtttggattggcttatttgagctcatctattagcataagtttagtgaaaccgtcatggaaaacttatgaaaacagcttctgacaattttcacaagc 166  Q
    |||||||||| ||| ||||||||| || ||||| || ||||||||| || | |  ||   ||| |||||| |||| ||| || |||||||||| | | ||    
T  29388768 gcctgtttgggttgacttatttgaccttatctactaacataagttttgtaagattgtttgggagaacttacgaaagcagtttatgacaatttttatatgc 29388669  T
Q  167 ttttttcagcttattttcataagttctccaaaatagcttacaaaaac 213  Q
    | |||||| ||||||||||||| |||||||  |||||||| ||||||    
T  29388668 tcttttcaacttattttcataaattctccagtatagcttataaaaac 29388622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 151 - 277
Target Start/End: Original strand, 33586955 - 33587080
Alignment:
Q  151 gacaattttcacaagcttttttcagcttattttcataagttctccaaaatagcttacaaaaacagctaatatcatacacaaaaacaatttagcttcattt 250  Q
    |||||| |||| |||||||| | | |||||||||||||||||||| | |||||||| ||||||| |  ||| |||| ||||||||  || | | |  |||    
T  33586955 gacaatattcataagcttttcttaacttattttcataagttctccgatatagcttataaaaacaacctataacatatacaaaaac-gttcaacgttgttt 33587053  T
Q  251 tatctttctctataaagatagcttatg 277  Q
    |||||||| ||||||| ||||||||||    
T  33587054 tatctttcgctataaaaatagcttatg 33587080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 175 - 257
Target Start/End: Complemental strand, 42685470 - 42685388
Alignment:
Q  175 gcttattttcataagttctccaaaatagcttacaaaaacagctaatatcatacacaaaaacaatttagcttcattttatcttt 257  Q
    ||||||||||| | ||||||||||||||||||  |||||| || | | | || | |||||||||||| |||||||||||||||    
T  42685470 gcttattttcacacgttctccaaaatagcttatgaaaacaacttagagcttataaaaaaacaatttaacttcattttatcttt 42685388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 136 - 277
Target Start/End: Complemental strand, 44797972 - 44797830
Alignment:
Q  136 atgaaaacagcttctgacaattttcacaag-cttttttcagcttattttcataagttctccaaaatagcttacaaaaacagctaatatcatacacaaaaa 234  Q
    ||||||||||| | ||||| |||||| |||  |||||| | ||||| || ||||| ||||||| | |||||| ||||||| || ||| | |||||||||     
T  44797972 atgaaaacagcgtatgacatttttcataagtttttttttaacttatctttataagctctccaatacagcttataaaaacaacttatagcgtacacaaaat 44797873  T
Q  235 caatttagcttcattttatctttctctataaagatagcttatg 277  Q
    ||||||| | |  ||||||||||  ||||||| ||||||||||    
T  44797872 caatttaacgttgttttatcttttgctataaaaatagcttatg 44797830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 168 - 241
Target Start/End: Complemental strand, 20031802 - 20031729
Alignment:
Q  168 tttttcagcttattttcataagttctccaaaatagcttacaaaaacagctaatatcatacacaaaaacaattta 241  Q
    |||||||||| |||||||||||||||| |||||||||||  ||||| ||| ||| | ||||  |||||||||||    
T  20031802 tttttcagctcattttcataagttctctaaaatagcttatgaaaactgcttatagcttacatgaaaacaattta 20031729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 134 - 195
Target Start/End: Complemental strand, 21523644 - 21523584
Alignment:
Q  134 ttatgaaaacagcttctgacaattttcacaagcttttttcagcttattttcataagttctcc 195  Q
    ||||||||||| ||| ||||| |||||| ||||||||| |||||||||||||||| ||||||    
T  21523644 ttatgaaaacaacttatgacatttttcataagcttttt-cagcttattttcataacttctcc 21523584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 142 - 239
Target Start/End: Complemental strand, 41512730 - 41512633
Alignment:
Q  142 acagcttctgacaattttcacaagcttttttcagcttattttcataagttctccaaaatagcttacaaaaacagctaatatcatacacaaaaacaatt 239  Q
    ||||||| | ||| |||||| |||||||| ||| |||||||||||||||||| | | | ||||||  |||||| || ||| ||||| |||||||||||    
T  41512730 acagcttataacacttttcataagcttttatcatcttattttcataagttcttccagaaagcttatgaaaacaacttatagcatacgcaaaaacaatt 41512633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 65 - 117
Target Start/End: Original strand, 39691063 - 39691115
Alignment:
Q  65 tggcctgtttggattggcttatttgagctcatctattagcataagtttagtga 117  Q
    ||||||||||| |||| |||||||||||| ||||| |||||||||||| ||||    
T  39691063 tggcctgtttgaattgacttatttgagcttatctactagcataagttttgtga 39691115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 150 - 214
Target Start/End: Original strand, 44862983 - 44863047
Alignment:
Q  150 tgacaattttcacaagcttttttcagcttattttcataagttctccaaaatagcttacaaaaaca 214  Q
    |||| ||||||| |||||||||||| ||||||| |||||||||| |||  ||||||| |||||||    
T  44862983 tgacgattttcataagcttttttcaacttatttgcataagttctacaatttagcttataaaaaca 44863047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 169 - 217
Target Start/End: Original strand, 50004162 - 50004210
Alignment:
Q  169 ttttcagcttattttcataagttctccaaaatagcttacaaaaacagct 217  Q
    ||||||||||||||||||||||||||||| ||| ||||  |||||||||    
T  50004162 ttttcagcttattttcataagttctccaagataacttaggaaaacagct 50004210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 170 - 206
Target Start/End: Original strand, 52315216 - 52315252
Alignment:
Q  170 tttcagcttattttcataagttctccaaaatagctta 206  Q
    |||||||||||||||||||||| ||||||||||||||    
T  52315216 tttcagcttattttcataagttttccaaaatagctta 52315252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 133 - 240
Target Start/End: Complemental strand, 2996660 - 2996554
Alignment:
Q  133 cttatgaaaacagcttctgacaattttcacaagcttttttcagcttattttcataagttctccaaaatagcttacaaaaacagctaatatcatacacaaa 232  Q
    |||||||||||| ||| ||||| | | || |||||||||||| |||||||||||| | ||||||| ||||||||  |||||| || ||| | || | |||    
T  2996660 cttatgaaaacaacttatgaca-tgtccataagcttttttcaacttattttcatacgctctccaagatagcttatgaaaacaacttataacttatataaa 2996562  T
Q  233 aacaattt 240  Q
    ||||||||    
T  2996561 aacaattt 2996554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 180 - 291
Target Start/End: Complemental strand, 7601800 - 7601689
Alignment:
Q  180 ttttcataagttctccaaaatagcttacaaaaacagctaatatcatacacaaaaacaatttagcttcattttatctttctctataaagatagcttatgta 279  Q
    ||||| ||||||||| || |||| ||| ||||||  || ||| |||| |||||||||||||| ||| |||||||| ||  |||||   |||||||||  |    
T  7601800 ttttcttaagttctctaatatagtttataaaaactactcataacatatacaaaaacaatttaactttattttatcctttgctataggaatagcttataca 7601701  T
Q  280 taagcgcttatc 291  Q
    ||||||||||||    
T  7601700 taagcgcttatc 7601689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 131 - 194
Target Start/End: Complemental strand, 20109675 - 20109612
Alignment:
Q  131 aacttatgaaaacagcttctgacaattttcacaagcttttttcagcttattttcataagttctc 194  Q
    ||||| |||||||||||| ||||| |||||| ||| ||||||| ||| ||||| ||||||||||    
T  20109675 aacttttgaaaacagcttatgacatttttcataagtttttttctgctgatttttataagttctc 20109612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 128 - 205
Target Start/End: Complemental strand, 38515923 - 38515849
Alignment:
Q  128 gaaaacttatgaaaacagcttctgacaattttcacaagcttttttcagcttattttcataagttctccaaaatagctt 205  Q
    ||||||||  ||||||||||| |||||   |||| ||||| ||||||||||||||| |||| || |||||||||||||    
T  38515923 gaaaacttgggaaaacagcttatgaca---ttcataagctgttttcagcttatttttataaattttccaaaatagctt 38515849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 169 - 250
Target Start/End: Complemental strand, 25332827 - 25332745
Alignment:
Q  169 ttttcagcttattttcataagttct-ccaaaatagcttacaaaaacagctaatatcatacacaaaaacaatttagcttcattt 250  Q
    |||||||||||||||||||||||||   || |||||||| ||||| |||| | | | || |||||||||||||| ||||||||    
T  25332827 ttttcagcttattttcataagttctgataagatagcttataaaaatagcttagagcttatacaaaaacaatttaacttcattt 25332745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 69 - 254
Target Start/End: Original strand, 27043748 - 27043933
Alignment:
Q  69 ctgtttggattggcttatttgagctcatctattagcataagtttagtgaaaccgtcatggaa-aacttatgaaaacagcttctgacaattttcacaagct 167  Q
    |||||||||||| |||||||||||| ||||| |  ||||||||| ||||||| ||  ||||| || ||||| ||| ||||| || ||   | || ||  |    
T  27043748 ctgtttggattgacttatttgagcttatctactgacataagttttgtgaaactgtt-tggaagaagttatgcaaatagcttatggcatcgtccataaatt 27043846  T
Q  168 tttttcagcttattttcataagttctccaaaatagcttacaaaaacagctaatatcatacacaaaaacaatttagcttcattttatc 254  Q
     |||| ||||||| |||||| ||||||||| |||| ||| ||||||| || ||| | || || ||||||||||| ||| ||||||||    
T  27043847 gtttttagcttatattcatacgttctccaagatagtttataaaaacatcttatagcttatacgaaaacaatttaactttattttatc 27043933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 168 - 206
Target Start/End: Original strand, 30377432 - 30377470
Alignment:
Q  168 tttttcagcttattttcataagttctccaaaatagctta 206  Q
    |||||||||||||||||||||| ||||||| ||||||||    
T  30377432 tttttcagcttattttcataagctctccaagatagctta 30377470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 167 - 257
Target Start/End: Original strand, 39691159 - 39691249
Alignment:
Q  167 ttttttcagcttattttcataagttctccaaaatagcttacaaaaacagctaatatcatacacaaaaacaatttagcttcattttatcttt 257  Q
    |||||||| ||||||||| |||||||| ||| |||||||| ||||||| || ||| |||| ||||||  | |||| | | |||||||||||    
T  39691159 ttttttcaacttattttcgtaagttcttcaatatagcttataaaaacaacttatagcatatacaaaacaattttaacattattttatcttt 39691249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 163 - 217
Target Start/End: Complemental strand, 52259689 - 52259635
Alignment:
Q  163 aagcttttttcagcttattttcataagttctccaaaatagcttacaaaaacagct 217  Q
    ||||| |||||| |||||||||||||| ||||| | |||||||| ||||||||||    
T  52259689 aagctattttcaacttattttcataagctctcccagatagcttataaaaacagct 52259635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 169 - 206
Target Start/End: Original strand, 2592327 - 2592364
Alignment:
Q  169 ttttcagcttattttcataagttctccaaaatagctta 206  Q
    |||||||||||||| |||||| ||||||||||||||||    
T  2592327 ttttcagcttatttccataagctctccaaaatagctta 2592364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 131 - 195
Target Start/End: Complemental strand, 2703117 - 2703052
Alignment:
Q  131 aacttatgaaaacagcttctgacaattttcacaagct-tttttcagcttattttcataagttctcc 195  Q
    |||||| |||||||||||   ||| | |||| ||||| ||||||||||||||||||||||||||||    
T  2703117 aacttacgaaaacagcttgcaacattgttcataagctgtttttcagcttattttcataagttctcc 2703052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 66 - 107
Target Start/End: Complemental strand, 23320006 - 23319965
Alignment:
Q  66 ggcctgtttggattggcttatttgagctcatctattagcata 107  Q
    |||||||||||||||||||||||||| | ||||| |||||||    
T  23320006 ggcctgtttggattggcttatttgagattatctactagcata 23319965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 170 - 223
Target Start/End: Original strand, 25548548 - 25548601
Alignment:
Q  170 tttcagcttattttcataagttctccaaaatagcttacaaaaacagctaatatc 223  Q
    ||||||||| ||||| ||| |||||||||||||||||  ||||||||| |||||    
T  25548548 tttcagcttgttttcgtaatttctccaaaatagcttatgaaaacagcttatatc 25548601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 66 - 183
Target Start/End: Complemental strand, 25571414 - 25571298
Alignment:
Q  66 ggcctgtttggattggcttatttgagctcatctattagcataagtttagtgaaaccgtcatggaaaacttatgaaaacagcttctgacaattttcacaag 165  Q
    |||||||||||||||||||||||||| | ||||| |  ||||||||   |||||| ||   ||| |||||||| |||||| || |||  || |||| |||    
T  25571414 ggcctgtttggattggcttatttgagtttatctactgacataagttacatgaaactgtttaggagaacttatggaaacagtttatga-tatgttcataag 25571316  T
Q  166 cttttttcagcttatttt 183  Q
    || |||||||||||||||    
T  25571315 ctgttttcagcttatttt 25571298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 131 - 206
Target Start/End: Original strand, 42641620 - 42641696
Alignment:
Q  131 aacttatgaaaacagcttctgacaattttcacaagctttttt-cagcttat-tttcataagttctccaaaatagctta 206  Q
    |||||||||||||| ||| ||||| | |||||||||| |||| |||||||| ||||||||| || |||||||||||||    
T  42641620 aacttatgaaaacaccttatgaca-tgttcacaagctgttttgcagcttatatttcataagctcaccaaaatagctta 42641696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 70 - 154
Target Start/End: Original strand, 437083 - 437167
Alignment:
Q  70 tgtttggattggcttatttgagctcatctattagcataagtttagtgaaaccgtcatggaaaacttatgaaaacagcttctgaca 154  Q
    |||||||||||| ||||||||||  ||||| |||||||| ||| |||| ||  |   |||||||||||||||||| ||| |||||    
T  437083 tgtttggattggtttatttgagcatatctagtagcataacttttgtgagactatttgggaaaacttatgaaaacaacttatgaca 437167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 72 - 108
Target Start/End: Original strand, 3637299 - 3637335
Alignment:
Q  72 tttggattggcttatttgagctcatctattagcataa 108  Q
    ||||||||| |||||||||||| ||||||||||||||    
T  3637299 tttggattgacttatttgagcttatctattagcataa 3637335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 169 - 205
Target Start/End: Complemental strand, 4500898 - 4500862
Alignment:
Q  169 ttttcagcttattttcataagttctccaaaatagctt 205  Q
    ||||||||||||||||||||  |||||||||||||||    
T  4500898 ttttcagcttattttcataatctctccaaaatagctt 4500862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 135 - 187
Target Start/End: Complemental strand, 8263500 - 8263448
Alignment:
Q  135 tatgaaaacagcttctgacaattttcacaagcttttttcagcttattttcata 187  Q
    |||||||||||||| |||| |  ||||||||||||||||| |||||| |||||    
T  8263500 tatgaaaacagcttatgactaaattcacaagcttttttcaacttattgtcata 8263448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 135 - 187
Target Start/End: Complemental strand, 8276918 - 8276866
Alignment:
Q  135 tatgaaaacagcttctgacaattttcacaagcttttttcagcttattttcata 187  Q
    |||||||||||||| |||| |  ||||||||||||||||| |||||| |||||    
T  8276918 tatgaaaacagcttatgactaaattcacaagcttttttcaacttattgtcata 8276866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 69 - 117
Target Start/End: Complemental strand, 8705093 - 8705045
Alignment:
Q  69 ctgtttggattggcttatttgagctcatctattagcataagtttagtga 117  Q
    ||||||||||||||| ||||||||| |||||||  ||||||||| ||||    
T  8705093 ctgtttggattggctcatttgagcttatctattgacataagttttgtga 8705045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 171 - 275
Target Start/End: Original strand, 13126629 - 13126731
Alignment:
Q  171 ttcagcttattttcataagttctccaaaatagcttacaaaaacagctaatatcatacacaaaaacaatttagcttcattttatctttctctataaagata 270  Q
    |||||||||||||||||||||| |||| ||||||||  |||| | || ||| |||| |||||||||| | | ||  |||||||| ||| ||||||| |||    
T  13126629 ttcagcttattttcataagttcaccaacatagcttatgaaaataccttatagcata-acaaaaacaactaaactctattttatccttc-ctataaaaata 13126726  T
Q  271 gctta 275  Q
    |||||    
T  13126727 gctta 13126731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 169 - 221
Target Start/End: Original strand, 32421277 - 32421329
Alignment:
Q  169 ttttcagcttattttcataagttctccaaaatagcttacaaaaacagctaata 221  Q
    ||||||||||||||||||||  |||| || |||||||| |||||| |||||||    
T  32421277 ttttcagcttattttcataacctctctaagatagcttataaaaactgctaata 32421329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 131 - 187
Target Start/End: Original strand, 38336876 - 38336932
Alignment:
Q  131 aacttatgaaaacagcttctgacaattttcacaagcttttttcagcttattttcata 187  Q
    ||||||||||| |||||| || |||| ||| ||||||||| || |||||||||||||    
T  38336876 aacttatgaaatcagcttatggcaatgttcccaagcttttatcggcttattttcata 38336932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 131 - 187
Target Start/End: Original strand, 43886112 - 43886167
Alignment:
Q  131 aacttatgaaaacagcttctgacaattttcacaagcttttttcagcttattttcata 187  Q
    |||||||||||||||||| || || |||||| ||||| |||||||||||||| ||||    
T  43886112 aacttatgaaaacagcttatggca-ttttcataagctattttcagcttatttccata 43886167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #78
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 169 - 217
Target Start/End: Complemental strand, 47800675 - 47800627
Alignment:
Q  169 ttttcagcttattttcataagttctccaaaatagcttacaaaaacagct 217  Q
    ||||||||||||||||||||| ||| ||| ||||||||  |||||||||    
T  47800675 ttttcagcttattttcataagctcttcaagatagcttatgaaaacagct 47800627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #79
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 177 - 257
Target Start/End: Complemental strand, 56480392 - 56480312
Alignment:
Q  177 ttattttcataagttctccaaaatagcttacaaaaacagctaatatcatacacaaaaacaatttagcttcattttatcttt 257  Q
    ||||||||||||| ||||||| |||| |||  ||||||||| ||| | || ||| |||||||||| ||| ||||| |||||    
T  56480392 ttattttcataagctctccaagatagtttatgaaaacagcttataacttatacataaacaatttaactttattttgtcttt 56480312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 71; Significance: 6e-32; HSPs: 59)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 76 - 250
Target Start/End: Complemental strand, 18133801 - 18133627
Alignment:
Q  76 gattggcttatttgagctcatctattagcataagtttagtgaaaccgtcatggaaaacttatgaaaacagcttctgacaattttcacaagcttttttcag 175  Q
    ||||||||||||| |||| ||||| ||| |||||||| |||| || ||   ||| | ||| ||||| |||||| | ||||||||||||||||||||||||    
T  18133801 gattggcttatttaagcttatctactagtataagttttgtgagactgtttgggagagcttgtgaaatcagcttataacaattttcacaagcttttttcag 18133702  T
Q  176 cttattttcataagttctccaaaatagcttacaaaaacagctaatatcatacacaaaaacaatttagcttcattt 250  Q
    |||||||||||||||||||||| |||| ||| |||| ||||| |||  ||| |||||| ||||||| ||||||||    
T  18133701 cttattttcataagttctccaatatagtttataaaaccagcttataggatatacaaaagcaatttaacttcattt 18133627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 66 - 279
Target Start/End: Original strand, 35534528 - 35534738
Alignment:
Q  66 ggcctgtttggattggcttatttgagctcatctattagcataagtttagtgaaaccgtcatggaaaacttatgaaaacagcttctgacaattttcacaag 165  Q
    ||||||||| || || |||||||||||| ||||| || ||||||||| |||| || ||    || ||||| |||||||||||| |||||||||| |||||    
T  35534528 ggcctgtttagaatgacttatttgagcttatctactaacataagttttgtgagactgtttgagagaacttgtgaaaacagcttatgacaattttaacaag 35534627  T
Q  166 cttttttcagcttattttcataagttctccaaaatagcttacaaaaacagctaatatcatacacaaaaacaatttagcttcattttatctttctctataa 265  Q
    |||||||| ||||| ||||||||||||||||| ||| ||||  |||||| |  |||| | | |||||||||||||| ||| ||||||||||| |||||||    
T  35534628 cttttttcggcttactttcataagttctccaatataacttatgaaaacaac--atataacatacaaaaacaatttaactttattttatcttt-tctataa 35534724  T
Q  266 agatagcttatgta 279  Q
    | ||| ||||||||    
T  35534725 aaatatcttatgta 35534738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 69 - 278
Target Start/End: Complemental strand, 26771416 - 26771208
Alignment:
Q  69 ctgtttggattggcttatttgagctcatctattagcataagtttagtgaaaccgtcatggaaaacttatgaaaacagcttctgacaattttcacaagctt 168  Q
    ||||||||| ||| |||| |||||| |||||   |||||||||| |||| || ||   ||| |||||||||||||||||| |||||||||||| |||| |    
T  26771416 ctgtttggactgg-ttatctgagcttatctacgggcataagttttgtgagactgtttgggagaacttatgaaaacagcttatgacaattttcaaaagcct 26771318  T
Q  169 ttttcagcttattttcataagttctccaaaatagcttacaaaaacagctaatatcatacacaaaaacaatttagcttcattttatctttctctataaaga 268  Q
    |||||| ||||||||||||||||||| || ||| |||| ||||| |||| ||| |||| ||||||||||||||  || |||||||  ||  ||||| | |    
T  26771317 ttttcaacttattttcataagttctctaatatatcttataaaaaaagcttatagcatatacaaaaacaatttaagtttattttatgctttactatagaaa 26771218  T
Q  269 tagcttatgt 278  Q
    ||||||||||    
T  26771217 tagcttatgt 26771208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 66 - 237
Target Start/End: Original strand, 30251369 - 30251540
Alignment:
Q  66 ggcctgtttggattggcttatttgagctcatctattagcataagtttagtgaaaccgtcatggaaaacttatgaaaacagcttctgacaattttcacaag 165  Q
    |||||||||||||||||||||||||||| ||||| |  ||||||||| |||| || ||   ||| |||||| ||||||||||| |  || |||||| |||    
T  30251369 ggcctgtttggattggcttatttgagcttatctactgacataagtttcgtgagactgtttgggagaacttacgaaaacagcttattgcatttttcataag 30251468  T
Q  166 cttttttcagcttattttcataagttctccaaaatagcttacaaaaacagctaatatcatacacaaaaacaa 237  Q
    |||||| ||||||||||||||||||  ||||| ||||||||  ||||||||| ||| |||| |||| |||||    
T  30251469 ctttttacagcttattttcataagtggtccaagatagcttatgaaaacagcttataacatatacaataacaa 30251540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 67 - 202
Target Start/End: Original strand, 43045641 - 43045776
Alignment:
Q  67 gcctgtttggattggcttatttgagctcatctattagcataagtttagtgaaaccgtcatggaaaacttatgaaaacagcttctgacaattttcacaagc 166  Q
    |||||||||||||||||||||| |||| ||||| ||||||||| || |||| || ||  |||| | ||||||||||||||||   |||||||| | ||||    
T  43045641 gcctgtttggattggcttatttaagcttatctactagcataagatttgtgagactgttttggagatcttatgaaaacagcttacaacaattttaataagc 43045740  T
Q  167 ttttttcagcttattttcataagttctccaaaatag 202  Q
    |||||||| |||||||||||||||||||||| ||||    
T  43045741 ttttttcaacttattttcataagttctccaatatag 43045776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 73 - 214
Target Start/End: Complemental strand, 12976360 - 12976220
Alignment:
Q  73 ttggattggcttatttgagctcatctattagcataagtttagtgaaaccgtcatggaaaacttatgaaaacagcttctgacaattttcacaagctttttt 172  Q
    |||| |||||||||||||||| ||||| ||||||||| || |||| || ||   | | ||||||||| |||||||||| |||||||||| ||||||||||    
T  12976360 ttggtttggcttatttgagcttatctactagcataaggtttgtgagactgtttagtagaacttatgagaacagcttctaacaattttcaaaagctttttt 12976261  T
Q  173 cagcttattttcataagttctccaaaatagcttacaaaaaca 214  Q
    ||||||| |||||||||||||| || |||||||| |||||||    
T  12976260 cagctta-tttcataagttctctaatatagcttataaaaaca 12976220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 60 - 202
Target Start/End: Original strand, 35643897 - 35644039
Alignment:
Q  60 acatatggcctgtttggattggcttatttgagctcatctattagcataagtttagtgaaaccgtcatggaaaacttatgaaaacagcttctgacaatttt 159  Q
    ||||| |||||||| ||||||||||||||| ||| ||||| | |||||| ||| |||| || ||   ||| |||||||||||| || || ||||||||||    
T  35643897 acatagggcctgttgggattggcttatttgggcttatctactggcataatttttgtgagactgtttgggataacttatgaaaatagtttatgacaatttt 35643996  T
Q  160 cacaagcttttttcagcttattttcataagttctccaaaatag 202  Q
    || |||||||||||| |||||||||||||| ||||||| ||||    
T  35643997 cataagcttttttcaacttattttcataagctctccaatatag 35644039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 134 - 253
Target Start/End: Original strand, 10758240 - 10758358
Alignment:
Q  134 ttatgaaaacagcttctgacaattttcacaagcttttttcagcttattttcataagttctccaaaatagcttacaaaaacagctaatatcatacacaaaa 233  Q
    ||||||||||||||| |||||||||||| |||||||||||||||| ||||||||||||  | || |||||||| ||| ||| || ||| |||| ||||||    
T  10758240 ttatgaaaacagcttatgacaattttcaaaagcttttttcagcttgttttcataagtt-gctaatatagcttataaagacaacttatagcatatacaaaa 10758338  T
Q  234 acaatttagcttcattttat 253  Q
    |||||||| ||| |||||||    
T  10758339 acaatttaactttattttat 10758358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 137 - 247
Target Start/End: Complemental strand, 27028915 - 27028805
Alignment:
Q  137 tgaaaacagcttctgacaattttcacaagcttttttcagcttattttcataagttctccaaaatagcttacaaaaacagctaatatcatacacaaaaaca 236  Q
    ||||||||||||  |||| |||||| ||||| ||||||||||||||||||||| ||||||| ||||||||  ||||||||| ||| |||| ||| |||||    
T  27028915 tgaaaacagcttaggacatttttcataagctattttcagcttattttcataagctctccaagatagcttatgaaaacagcttatagcatatacacaaaca 27028816  T
Q  237 atttagcttca 247  Q
    ||||| |||||    
T  27028815 atttaacttca 27028805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 69 - 232
Target Start/End: Original strand, 36963272 - 36963434
Alignment:
Q  69 ctgtttggattggcttatttgagctcatctattagcataagtttagtgaaaccgtcatggaaaacttatgaaaacagcttctgacaattttcacaagctt 168  Q
    ||||||||||||||||||||||||| ||||| | |||||||||| |||| || ||   ||| ||||||  |||||||||| |||||||||||| ||||||    
T  36963272 ctgtttggattggcttatttgagctaatctactggcataagttttgtgagactgtttgggagaacttacaaaaacagcttttgacaattttcaaaagctt 36963371  T
Q  169 ttttcagcttattttcataagttctccaaaatagcttacaaaaacagctaatatcatacacaaa 232  Q
    ||| || |||||||| || ||||||| || |||| | | ||||||| || ||| |||| |||||    
T  36963372 tttacaacttatttt-attagttctctaatatagttcagaaaaacaacttatagcataaacaaa 36963434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 62 - 237
Target Start/End: Complemental strand, 38648510 - 38648335
Alignment:
Q  62 atatggcctgtttggattggcttatttgagctcatctattagcataagtttagtgaaaccgtcatggaaaacttatgaaaacagcttctgacaattttca 161  Q
    |||||||||||| |||||||||||||| || | ||||| |  ||||||||| |||| || ||   ||| | |||||||||||||||  ||||| || |||    
T  38648510 atatggcctgttaggattggcttatttaagattatctactgacataagttttgtgagactgtttgggagaccttatgaaaacagctcatgacagttctca 38648411  T
Q  162 caagcttttttcagcttattttcataagttctccaaaatagcttacaaaaacagctaatatcatacacaaaaacaa 237  Q
     |||||||||| ||| || ||||||||||||| ||| ||||||||  |||||| || ||| |||| ||||||||||    
T  38648410 taagcttttttaagcgtaatttcataagttctacaagatagcttatgaaaacaactcataacatatacaaaaacaa 38648335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 131 - 264
Target Start/End: Complemental strand, 29205897 - 29205765
Alignment:
Q  131 aacttatgaaaacagcttctgacaattttcacaagcttttttcagcttattttcataagttctccaaaatagcttacaaaaacagctaatatcatacaca 230  Q
    ||||||| |||||||| | ||||| |||||| |||||||||| | || | |||||||| ||||||||||||| |||  |||| | || ||| |||| |||    
T  29205897 aacttattaaaacagcgtatgacatttttcataagcttttttaacct-actttcataaattctccaaaatagtttatgaaaataacttatagcatataca 29205799  T
Q  231 aaaacaatttagcttcattttatctttctctata 264  Q
    ||||||||||| ||||||||||||||| ||||||    
T  29205798 aaaacaatttaacttcattttatctttttctata 29205765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 131 - 298
Target Start/End: Complemental strand, 10114579 - 10114413
Alignment:
Q  131 aacttatgaaaacagcttctgacaattttcacaagcttttttcagcttattttcataagttctccaaaatagcttacaaaaacagctaatatcatacaca 230  Q
    |||||||||||||| ||| | ||| || ||| | ||| ||||||||||||||||||| ||||||||| |||||| |  ||||||||| ||| | || ||     
T  10114579 aacttatgaaaacaacttataacatttatcatatgctgttttcagcttattttcatatgttctccaatatagctaatgaaaacagcttatagcttatacc 10114480  T
Q  231 aaaacaatttagcttcattttatctttctctataaagatagcttatgtataagcgcttatcataataa 298  Q
    ||||||||| | ||| |||||||||||  ||||| | |||||||||  |||||| |||||||| ||||    
T  10114479 aaaacaattcaactt-attttatcttttgctatagaaatagcttatacataagcacttatcatcataa 10114413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 159 - 266
Target Start/End: Complemental strand, 38602395 - 38602289
Alignment:
Q  159 tcacaagcttttttcagcttattttcataagttctccaaaatagcttacaaaaacagctaatatcatacacaaaaacaatttagcttcattttatctttc 258  Q
    ||||||||| ||||| ||||||||||| || |||||||  |||||||| |||||||||| ||| ||||  ||||| ||||||| |||||||||||||||     
T  38602395 tcacaagctgttttcggcttattttcacaaattctccagtatagcttataaaaacagcttatagcatatgcaaaagcaatttaacttcattttatcttt- 38602297  T
Q  259 tctataaa 266  Q
    ||||||||    
T  38602296 tctataaa 38602289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 131 - 277
Target Start/End: Original strand, 16825518 - 16825663
Alignment:
Q  131 aacttatgaaaacagcttctgacaattttcacaagcttttttcagcttattttcataagttctccaaaatagcttacaaaaacagctaatatcatacaca 230  Q
    |||||||||||| ||||| |||||||||||| ||||||||| || |||||||||||||||||  ||| |||||||  | ||||| || ||| | || |||    
T  16825518 aacttatgaaaatagcttatgacaattttcataagcttttt-caacttattttcataagttcggcaatatagcttgtagaaacaacttataacgtaaaca 16825616  T
Q  231 aaaacaatttagcttcattttatctttctctataaagatagcttatg 277  Q
    ||||||||||| | | |||||||| ||  ||||||  ||||||||||    
T  16825617 aaaacaatttaacattattttatcctttactataagaatagcttatg 16825663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 64 - 206
Target Start/End: Original strand, 31716140 - 31716282
Alignment:
Q  64 atggcctgtttggattggcttatttgagctcatctattagcataagtttagtgaaaccgtcatggaaaacttatgaaaacagcttctgacaattttcaca 163  Q
    |||||| ||||| ||| ||||||||||||| ||||||| |||||  |||  ||| || ||   ||| ||||| |||||||||||| ||||| | |||| |    
T  31716140 atggccagtttgaattagcttatttgagcttatctattggcatattttttttgagactgtttcggagaacttttgaaaacagcttatgacattcttcata 31716239  T
Q  164 agcttttttcagcttattttcataagttctccaaaatagctta 206  Q
    |||||||||||||||||||  |||| |||||||| ||||||||    
T  31716240 agcttttttcagcttatttctataacttctccaagatagctta 31716282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 131 - 202
Target Start/End: Complemental strand, 10120846 - 10120775
Alignment:
Q  131 aacttatgaaaacagcttctgacaattttcacaagcttttttcagcttattttcataagttctccaaaatag 202  Q
    |||||||||||||||||| ||||| || ||| | ||| ||||||||||||||||||||||||||||| ||||    
T  10120846 aacttatgaaaacagcttatgacatttatcatatgctgttttcagcttattttcataagttctccaatatag 10120775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 169 - 300
Target Start/End: Original strand, 37353267 - 37353397
Alignment:
Q  169 ttttcagcttattttcataagttctccaaaatagcttacaaaaacagctaatatcatacacaaaaacaatttagcttcattttatctttctctataaaga 268  Q
    ||||||| ||||||||||||| |||| || ||||||||  ||||||||| ||| ||||||||||||||||||| ||| |||| ||||||   |||| | |    
T  37353267 ttttcagattattttcataagctctcaaagatagcttaagaaaacagcttatagcatacacaaaaacaatttaactttattt-atcttttgttatagaaa 37353365  T
Q  269 tagcttatgtataagcgcttatcataataagc 300  Q
    ||| || |  ||||||||||||||| ||||||    
T  37353366 tagtttgtacataagcgcttatcatcataagc 37353397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 68 - 241
Target Start/End: Complemental strand, 15180692 - 15180521
Alignment:
Q  68 cctgtttggattggcttatttgagctcatctattagcataagtttagtgaaaccgtcatggaaaacttatgaaaacagcttctgacaattttcacaagct 167  Q
    |||||||||||||||||||||||| | ||||| |  |||||||||  ||| ||  |  |||| || || ||||||||| || ||||||||||| |||| |    
T  15180692 cctgtttggattggcttatttgagtttatctactgccataagttttatgagactttt-tggagaatttctgaaaacaggttttgacaattttc-caagtt 15180595  T
Q  168 tttttcagcttattttcataagttctccaaaatagcttacaaaaacagctaatatcatacacaaaaacaattta 241  Q
    ||||| | |||||||||| ||||||||||| |||||||| | ||||| || ||| |||  ||||||| ||||||    
T  15180594 tttttaaacttattttcagaagttctccaatatagcttatagaaacaacttataacatttacaaaaataattta 15180521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 79 - 197
Target Start/End: Original strand, 1058005 - 1058122
Alignment:
Q  79 tggcttatttgagctcatctattagcataagtttagtgaaaccgtcatggaaaacttatgaaaacagcttctgacaattttcacaagcttttttcagctt 178  Q
    ||||||||||||||| ||||| |  ||||||||| |||| || ||   ||| ||||| ||||||| |||| ||||| ||||||  || ||||||| ||||    
T  1058005 tggcttatttgagcttatctacttacataagttttgtgagactgtttgggagaacttttgaaaactgcttatgacatttttcattag-ttttttccgctt 1058103  T
Q  179 attttcataagttctccaa 197  Q
    |||||||||||||||||||    
T  1058104 attttcataagttctccaa 1058122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 135 - 240
Target Start/End: Complemental strand, 6882013 - 6881908
Alignment:
Q  135 tatgaaaacagcttctgacaattttcacaagcttttttca-gcttattttcataagttctccaaaatagcttacaaaaacagctaatatcatacacaaaa 233  Q
    |||||||||||||  ||| |||||| ||||||||||||   |||||||||||||||||||||||  |||||||  ||||||||| ||| |||| | ||||    
T  6882013 tatgaaaacagctcatgataattttaacaagctttttttttgcttattttcataagttctccaatttagctta-taaaacagcttatagcatatataaaa 6881915  T
Q  234 acaattt 240  Q
    |||||||    
T  6881914 acaattt 6881908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 74 - 214
Target Start/End: Complemental strand, 28763515 - 28763375
Alignment:
Q  74 tggattggcttatttgagctcatctattagcataagtttagtgaaaccgtcatggaaaacttatgaaaacagcttctgacaattttcacaagc-tttttt 172  Q
    |||||| | ||||| | ||| ||||| || ||||||||| |||| || ||   ||| |||||||||||||||||| | |||||||||| |||| ||||||    
T  28763515 tggattagtttattcgggcttatctagtaacataagttttgtgagactgtttgggagaacttatgaaaacagcttataacaattttcataagcttttttt 28763416  T
Q  173 cagcttattttcataagttctccaaaatagcttacaaaaaca 214  Q
    || |||| ||||||||||||  ||| |||||||| |||||||    
T  28763415 caactta-tttcataagttcagcaatatagcttataaaaaca 28763375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 131 - 240
Target Start/End: Original strand, 29168037 - 29168146
Alignment:
Q  131 aacttatgaaaacagcttctgacaattttcacaagcttttttcagcttattttcataagttctccaaaatagcttacaaaaacagctaatatcatacaca 230  Q
    ||||||| ||||||| || ||||| |||||| ||   ||| ||||||||||| |||||||||||||| |||||| |  ||||||||| ||| |||| |||    
T  29168037 aacttataaaaacagattatgacatttttcataaatgtttctcagcttatttccataagttctccaagatagctcaggaaaacagcttatagcatataca 29168136  T
Q  231 aaaacaattt 240  Q
    |||| |||||    
T  29168137 aaaataattt 29168146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 174 - 279
Target Start/End: Original strand, 42043368 - 42043473
Alignment:
Q  174 agcttattttcataagttctccaaaatagcttacaaaaacagctaatatcatacacaaaaacaatttagcttcattttatctttctctataaagatagct 273  Q
    |||||||| |||| ||||||| || ||||||||  |||||| || ||||||||  ||||||||||||| || ||||||||||||  ||||| | |||||     
T  42043368 agcttattgtcattagttctctaagatagcttatgaaaacaacttatatcatatccaaaaacaatttaactgcattttatcttttgctatagaaatagca 42043467  T
Q  274 tatgta 279  Q
    ||||||    
T  42043468 tatgta 42043473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 169 - 253
Target Start/End: Original strand, 36338280 - 36338366
Alignment:
Q  169 ttttcagcttattttcataagttctccaaaatagcttacaaaaacagctaatatc--atacacaaaaacaatttagcttcattttat 253  Q
    |||||||||||||||||||||||||| || |||  ||| |||||||||| |||||  |||||  ||||||||| | |||||||||||    
T  36338280 ttttcagcttattttcataagttctcaaagatattttataaaaacagcttatatcttatacaagaaaacaattcaacttcattttat 36338366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 131 - 214
Target Start/End: Complemental strand, 37945686 - 37945603
Alignment:
Q  131 aacttatgaaaacagcttctgacaattttcacaagcttttttcagcttattttcataagttctccaaaatagcttacaaaaaca 214  Q
    ||||| |||||||||||| ||||||||| || |||| ||||| | |||||||||| ||||| | ||| |||||||| |||||||    
T  37945686 aacttctgaaaacagcttatgacaatttccataagcattttttaacttattttcagaagttgtacaatatagcttataaaaaca 37945603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 163 - 214
Target Start/End: Complemental strand, 43504809 - 43504758
Alignment:
Q  163 aagcttttttcagcttattttcataagttctccaaaatagcttacaaaaaca 214  Q
    ||||| |||||||||||||| |||||||||||||| |||||||| |||||||    
T  43504809 aagctgttttcagcttatttccataagttctccaagatagcttataaaaaca 43504758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 131 - 217
Target Start/End: Complemental strand, 1930125 - 1930039
Alignment:
Q  131 aacttatgaaaacagcttctgacaattttcacaagcttttttcagcttattttcataagttctccaaaatagcttacaaaaacagct 217  Q
    ||||| ||||||||| || ||||| | |||| ||||| ||||||||||||||||| ||| || |||| ||||||||  |||||||||    
T  1930125 aacttgtgaaaacagtttatgacattgttcataagctgttttcagcttattttcacaaggtcaccaagatagcttatgaaaacagct 1930039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 131 - 237
Target Start/End: Complemental strand, 12010976 - 12010870
Alignment:
Q  131 aacttatgaaaacagcttctgacaattttcacaagcttttttcagcttattttcataagttctccaaaatagcttacaaaaacagctaatatcatacaca 230  Q
    |||| ||||||||||||| | ||||||||| ||| || ||||| | ||||||||  ||||||||||| | || |||  |||||| || ||| ||||||||    
T  12010976 aactgatgaaaacagcttataacaattttcgcaaactattttcggtttattttctaaagttctccaatacagattatgaaaacaacttatagcatacaca 12010877  T
Q  231 aaaacaa 237  Q
    |||||||    
T  12010876 aaaacaa 12010870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 163 - 217
Target Start/End: Complemental strand, 38874704 - 38874650
Alignment:
Q  163 aagcttttttcagcttattttcataagttctccaaaatagcttacaaaaacagct 217  Q
    ||||| |||| |||||||||||||| ||||||||||||||||||  |||||||||    
T  38874704 aagctatttttagcttattttcatatgttctccaaaatagcttatgaaaacagct 38874650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 163 - 201
Target Start/End: Original strand, 42893502 - 42893540
Alignment:
Q  163 aagcttttttcagcttattttcataagttctccaaaata 201  Q
    ||||||||||||||||||||||||||||||||| |||||    
T  42893502 aagcttttttcagcttattttcataagttctccgaaata 42893540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 70 - 211
Target Start/End: Complemental strand, 44792807 - 44792668
Alignment:
Q  70 tgtttggattggcttatttgagctcatctattagcataagtttagtgaaaccgtcatggaaaacttatgaaaacagcttctgacaattttcacaagcttt 169  Q
    |||||||||||||||||||||||| ||||| | | |||| ||  |||| || ||  |||| ||||||  | |||| ||| || ||||||||| |||  ||    
T  44792807 tgtttggattggcttatttgagcttatctactgggataaattatgtgagactgttttggagaacttagaacaacaacttatggcaattttcataag--tt 44792710  T
Q  170 tttcagcttattttcataagttctccaaaatagcttacaaaa 211  Q
    ||||| || |||||||||| || ||||| |||||||||||||    
T  44792709 tttcaactcattttcataaattatccaatatagcttacaaaa 44792668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 152 - 193
Target Start/End: Original strand, 11407349 - 11407390
Alignment:
Q  152 acaattttcacaagcttttttcagcttattttcataagttct 193  Q
    ||||||||||||||||||||||| |||||||| |||||||||    
T  11407349 acaattttcacaagcttttttcaacttatttttataagttct 11407390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 158 - 215
Target Start/End: Complemental strand, 20672813 - 20672756
Alignment:
Q  158 ttcacaagcttttttcagcttattttcataagttctccaaaatagcttacaaaaacag 215  Q
    |||| ||||| ||||||||||||||||||||| ||||||  |||||||| ||||||||    
T  20672813 ttcataagctgttttcagcttattttcataagctctccaggatagcttataaaaacag 20672756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 66 - 206
Target Start/End: Original strand, 43717849 - 43717992
Alignment:
Q  66 ggcctgtttggattggcttatttgagctcatctattagcataagtttagtgaaaccgtcatggaaaacttatgaaaacagcttct---gacaattttcac 162  Q
    ||||| |||||||||||||||||||||| |||||||  ||||||||| |||| ||  |   ||| |||||||||||||||  | |   ||||    |||     
T  43717849 ggcctatttggattggcttatttgagcttatctattgacataagttttgtgagactatttgggagaacttatgaaaacagactatgaggacatcgctcat 43717948  T
Q  163 aagcttttttcagcttattttcataagttctccaaaatagctta 206  Q
    ||||| |||| |||||| ||||||||||||||||| ||||||||    
T  43717949 aagctgtttttagcttactttcataagttctccaagatagctta 43717992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 154 - 234
Target Start/End: Complemental strand, 11861871 - 11861791
Alignment:
Q  154 aattttcacaagcttttttcagcttattttcataagttctccaaaatagcttacaaaaacagctaatatcatacacaaaaa 234  Q
    |||||||| |||||||||| | | ||||||||||||||||| |  |||||||| ||||||| || ||| |||| |||||||    
T  11861871 aattttcaaaagctttttttaacgtattttcataagttctctattatagcttataaaaacaacttatagcatatacaaaaa 11861791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 171 - 206
Target Start/End: Complemental strand, 27754454 - 27754419
Alignment:
Q  171 ttcagcttattttcataagttctccaaaatagctta 206  Q
    ||||||||||||||||||| ||||||||||||||||    
T  27754454 ttcagcttattttcataagctctccaaaatagctta 27754419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 177 - 228
Target Start/End: Original strand, 30657798 - 30657849
Alignment:
Q  177 ttattttcataagttctccaaaatagcttacaaaaacagctaatatcataca 228  Q
    ||||||||||||||||||||| |||||||| ||||||| || ||| ||||||    
T  30657798 ttattttcataagttctccaatatagcttataaaaacatcttataacataca 30657849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 131 - 206
Target Start/End: Original strand, 35749550 - 35749625
Alignment:
Q  131 aacttatgaaaacagcttctgacaattttcacaagcttttttcagcttattttcataagttctccaaaatagctta 206  Q
    |||||||||||||||||| |  || |||||| || ||||||||| | ||||||||||||||||  || ||||||||    
T  35749550 aacttatgaaaacagcttgtagcatttttcataaacttttttcaacatattttcataagttctttaagatagctta 35749625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 131 - 189
Target Start/End: Complemental strand, 10383974 - 10383917
Alignment:
Q  131 aacttatgaaaacagcttctgacaattttcacaagcttttttcagcttattttcataag 189  Q
    |||||||||||||||||| |||| ||||||| ||||| ||| |||||||||| ||||||    
T  10383974 aacttatgaaaacagcttatgac-attttcataagctgtttacagcttatttccataag 10383917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 131 - 189
Target Start/End: Complemental strand, 13459734 - 13459677
Alignment:
Q  131 aacttatgaaaacagcttctgacaattttcacaagcttttttcagcttattttcataag 189  Q
    |||||||||||||||||| |||| ||||||| || || |||||||| ||||||||||||    
T  13459734 aacttatgaaaacagcttatgac-attttcataaactgttttcagcctattttcataag 13459677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 66 - 112
Target Start/End: Original strand, 13958001 - 13958047
Alignment:
Q  66 ggcctgtttggattggcttatttgagctcatctattagcataagttt 112  Q
    |||||||||||||||||||| ||||| | ||||||| ||||||||||    
T  13958001 ggcctgtttggattggcttacttgagtttatctattggcataagttt 13958047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 66 - 108
Target Start/End: Complemental strand, 16162915 - 16162873
Alignment:
Q  66 ggcctgtttggattggcttatttgagctcatctattagcataa 108  Q
    |||||||||||||||||||||||||| | ||||| ||||||||    
T  16162915 ggcctgtttggattggcttatttgagtttatctactagcataa 16162873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 158 - 204
Target Start/End: Complemental strand, 21653144 - 21653098
Alignment:
Q  158 ttcacaagcttttttcagcttattttcataagttctccaaaatagct 204  Q
    |||| ||||| ||||||||||||||||||||| ||||||| ||||||    
T  21653144 ttcataagctattttcagcttattttcataagctctccaagatagct 21653098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 251 - 293
Target Start/End: Original strand, 30657861 - 30657903
Alignment:
Q  251 tatctttctctataaagatagcttatgtataagcgcttatcat 293  Q
    ||||||| |||||||| |||| |||||||||||||||||||||    
T  30657861 tatctttttctataaaaatagtttatgtataagcgcttatcat 30657903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 131 - 201
Target Start/End: Complemental strand, 36338252 - 36338182
Alignment:
Q  131 aacttatgaaaacagcttctgacaattttcacaagcttttttcagcttattttcataagttctccaaaata 201  Q
    ||||| ||||||||  || ||||| |||||  ||||| |||||||||||||||||||| ||||| ||||||    
T  36338252 aacttgtgaaaacaatttatgacatttttccaaagctattttcagcttattttcataaattctcaaaaata 36338182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 67 - 109
Target Start/End: Complemental strand, 38874801 - 38874759
Alignment:
Q  67 gcctgtttggattggcttatttgagctcatctattagcataag 109  Q
    ||||||||||||||  ||||||||||| |||||||||||||||    
T  38874801 gcctgtttggattgttttatttgagcttatctattagcataag 38874759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 169 - 215
Target Start/End: Original strand, 44236841 - 44236887
Alignment:
Q  169 ttttcagcttattttcataagttctccaaaatagcttacaaaaacag 215  Q
    ||||||||||||||||||||| ||||||| ||||||||  |||||||    
T  44236841 ttttcagcttattttcataagctctccaatatagcttatgaaaacag 44236887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 131 - 188
Target Start/End: Complemental strand, 8146419 - 8146362
Alignment:
Q  131 aacttatgaaaacagcttctgacaattttcacaagcttttttcagcttattttcataa 188  Q
    ||||||||||||||| || ||||| |||||| ||| ||||| ||||||| ||||||||    
T  8146419 aacttatgaaaacagtttatgacacttttcataagttttttccagcttaatttcataa 8146362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 169 - 202
Target Start/End: Original strand, 9956832 - 9956865
Alignment:
Q  169 ttttcagcttattttcataagttctccaaaatag 202  Q
    ||||||||||||||||||||||||||||| ||||    
T  9956832 ttttcagcttattttcataagttctccaagatag 9956865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 164 - 217
Target Start/End: Original strand, 14247237 - 14247290
Alignment:
Q  164 agcttttttcagcttattttcataagttctccaaaatagcttacaaaaacagct 217  Q
    |||| |||||||||||||||||||||||||| |  ||| ||||| |||||||||    
T  14247237 agctgttttcagcttattttcataagttctctacgatatcttacgaaaacagct 14247290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 150 - 279
Target Start/End: Original strand, 25930553 - 25930682
Alignment:
Q  150 tgacaattttcacaagcttttttcagcttattttcataagttctccaaaatagcttacaaaaacagctaatatcatacacaaaaacaatttagcttcatt 249  Q
    ||||| |||||  ||||||||||||||||| | ||| ||||||||||| ||||||||  ||||||  | | | |||| ||||||||| ||||  || |||    
T  25930553 tgacacttttcgtaagcttttttcagcttactatcacaagttctccaagatagcttatgaaaacaatttaaagcatatacaaaaacattttaattttatt 25930652  T
Q  250 ttatctttctctataaagatagcttatgta 279  Q
    | ||| ||  ||||| | ||||||||||||    
T  25930653 tcatcctttcctatagaaatagcttatgta 25930682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 180 - 257
Target Start/End: Original strand, 29168921 - 29168998
Alignment:
Q  180 ttttcataagttctccaaaatagcttacaaaaacagctaatatcatacacaaaaacaatttagcttcattttatcttt 257  Q
    |||||||||||| ||||| ||| ||||  ||||||||| ||| |||| ||||||| ||||||  || |||||||||||    
T  29168921 ttttcataagttttccaatataacttaggaaaacagcttataacatatacaaaaataatttaatttaattttatcttt 29168998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 140 - 189
Target Start/End: Original strand, 31751546 - 31751595
Alignment:
Q  140 aaacagcttctgacaattttcacaagcttttttcagcttattttcataag 189  Q
    ||||||||| ||||| | |||| ||||| |||||||||||||||||||||    
T  31751546 aaacagcttatgacattgttcataagctattttcagcttattttcataag 31751595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 74 - 214
Target Start/End: Complemental strand, 6525964 - 6525824
Alignment:
Q  74 tggattggcttatttgagctcatctattagcataagtttagtgaaaccgtcatggaaaacttatgaaaacagcttctgacaattttcacaagcttttttc 173  Q
    ||||||| |||||||||| | ||||| || ||||||||| |||  || ||   |||||||||||||  || | || |||||||||||| || ||||   |    
T  6525964 tggattgtcttatttgagtttatctactaacataagttttgtgtgactgtttgggaaaacttatgatgactgtttatgacaattttcataaactttcaac 6525865  T
Q  174 agcttattttcataagttctccaaaatagcttacaaaaaca 214  Q
      ||| ||||||||||||||| || |||||||| |||||||    
T  6525864 tacttgttttcataagttctcaaatatagcttataaaaaca 6525824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 74 - 110
Target Start/End: Complemental strand, 11185368 - 11185332
Alignment:
Q  74 tggattggcttatttgagctcatctattagcataagt 110  Q
    |||||||||||||||||||| ||||||||| ||||||    
T  11185368 tggattggcttatttgagcttatctattagaataagt 11185332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 169 - 217
Target Start/End: Original strand, 28769357 - 28769405
Alignment:
Q  169 ttttcagcttattttcataagttctccaaaatagcttacaaaaacagct 217  Q
    |||||||||||||| |||||  ||||||||||||||||  |||||||||    
T  28769357 ttttcagcttatttccataaactctccaaaatagcttatgaaaacagct 28769405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 131 - 187
Target Start/End: Original strand, 32840966 - 32841022
Alignment:
Q  131 aacttatgaaaacagcttctgacaattttcacaagcttttttcagcttattttcata 187  Q
    |||||||||||||| ||| ||||| | |||| ||| | |||||||||||||||||||    
T  32840966 aacttatgaaaacaacttatgacattgttcataagttgttttcagcttattttcata 32841022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 131 - 215
Target Start/End: Complemental strand, 33808393 - 33808309
Alignment:
Q  131 aacttatgaaaacagcttctgacaattttcacaagcttttttcagcttattttcataagttctccaaaatagcttacaaaaacag 215  Q
    |||||||||||| ||||| ||| | | |||| ||| | |||| |||||||||||||||||||    | |||||||||||||||||    
T  33808393 aacttatgaaaatagcttatgatattgttcataagttgtttttagcttattttcataagttcattgagatagcttacaaaaacag 33808309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 67; Significance: 1e-29; HSPs: 87)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 157 - 279
Target Start/End: Original strand, 12464479 - 12464601
Alignment:
Q  157 tttcacaagcttttttcagcttattttcataagttctccaaaatagcttacaaaaacagctaatatcatacacaaaaacaatttagcttcattttatctt 256  Q
    ||||||||||||||||||||||||||||| ||||||||||| ||||||||  |||| |||| ||| |||| |||||||||||||| ||| ||||||||||    
T  12464479 tttcacaagcttttttcagcttattttcacaagttctccaagatagcttatgaaaatagcttatagcatatacaaaaacaatttaactttattttatctt 12464578  T
Q  257 tctctataaagatagcttatgta 279  Q
    | |||| | | ||||||||||||    
T  12464579 tttctacagaaatagcttatgta 12464601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 134 - 277
Target Start/End: Original strand, 43279512 - 43279653
Alignment:
Q  134 ttatgaaaacagcttctgacaattttcacaagcttttttcagcttattttcataagttctccaaaatagcttacaaaaacagctaatatcatacacaaaa 233  Q
    ||||||||||||||| |||||||||||| |||||||||||| |||||||||| ||||||||||| |||||||| ||||||| || ||| |||  ||||||    
T  43279512 ttatgaaaacagcttatgacaattttcataagcttttttcaacttattttcacaagttctccaatatagcttataaaaacaacttatagcat--acaaaa 43279609  T
Q  234 acaatttagcttcattttatctttctctataaagatagcttatg 277  Q
    |||||||  | | |||||||||||   |||||| ||||||||||    
T  43279610 acaatttcacattattttatcttttgatataaaaatagcttatg 43279653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 67 - 279
Target Start/End: Complemental strand, 45229665 - 45229454
Alignment:
Q  67 gcctgtttggattggcttatttgagctcatctattagcataagtttagtgaaaccgtcatggaaaacttatgaaaacagcttctgacaattttcacaagc 166  Q
    ||||||||||||||| | ||||||||| ||||| | |||||||||  |  | |||||   ||| |||||||||||| | ||| ||||| ||||||  |||    
T  45229665 gcctgtttggattggttgatttgagcttatctactggcataagttatgccacaccgtttgggagaacttatgaaaagaccttatgacatttttcattagc 45229566  T
Q  167 ttttttcagcttattttcataagttctccaaaatagcttacaaaaacagctaatatcatacacaaaaacaatttagcttcattttatctttctctataaa 266  Q
    |||||||||||||||||||||||||||| || ||||||||  ||||||  | ||| |||| |||||||||||||| | |||||||||| ||  ||||| |    
T  45229565 ttttttcagcttattttcataagttctcgaagatagcttatgaaaaca-atgataacatatacaaaaacaatttaacctcattttatcgtttgctataga 45229467  T
Q  267 gatagcttatgta 279  Q
     ||||||||||||    
T  45229466 aatagcttatgta 45229454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 66 - 197
Target Start/End: Complemental strand, 15305829 - 15305698
Alignment:
Q  66 ggcctgtttggattggcttatttgagctcatctattagcataagtttagtgaaaccgtcatggaaaacttatgaaaacagcttctgacaattttcacaag 165  Q
    |||||||||||||||||||||||||||| |||||||  ||||||||| ||||||| ||   | | ||||| ||| |||| ||| || ||||||||| |||    
T  15305829 ggcctgtttggattggcttatttgagcttatctattgacataagttttgtgaaactgtttggtagaacttttgacaacaacttatggcaattttcataag 15305730  T
Q  166 cttttttcagcttattttcataagttctccaa 197  Q
     |||||||| ||||||||||||||||||||||    
T  15305729 tttttttcaacttattttcataagttctccaa 15305698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 131 - 277
Target Start/End: Complemental strand, 32592676 - 32592531
Alignment:
Q  131 aacttatgaaaacagcttctgacaattttcacaagcttttttcagcttattttcataagttctccaaaatagcttacaaaaacagctaatatcatacaca 230  Q
    |||||||||||| |||||  ||||||||||| |||||||| ||| |||||||||||||||||||||| || ||||| ||||||| || ||| | || ||     
T  32592676 aacttatgaaaatagcttacgacaattttcataagcttttctcaacttattttcataagttctccaatattgcttataaaaacaacttatagcgtatac- 32592578  T
Q  231 aaaacaatttagcttcattttatctttctctataaagatagcttatg 277  Q
    ||||||||||| | | ||||||||||| |||||||| |||| |||||    
T  32592577 aaaacaatttaacattattttatctttttctataaaaatagtttatg 32592531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 70 - 278
Target Start/End: Original strand, 15757577 - 15757786
Alignment:
Q  70 tgtttggattggcttatttgagctcatctattagcataagtttagtgaaaccgtcatggaaaacttatgaaaacagcttctgacaattttcacaagcttt 169  Q
    |||||||| ||| ||||||||||| || || | |||||||||| |||| || |    ||| || |||||||||| |||| |||||||||||| |||||||    
T  15757577 tgtttggaatggtttatttgagcttatttactggcataagttttgtgagactgcttgggagaatttatgaaaactgcttatgacaattttcagaagcttt 15757676  T
Q  170 tttcagcttattttcataagttctccaaaatagcttacaaaaacagctaatatcatacac-aaaaacaatttagcttcattttatctttctctataaaga 268  Q
    |||||||||||||||||| ||||||    |||||||| ||| ||| || ||| |||| || |||||||||||| ||| |||||||| || ||| || | |    
T  15757677 tttcagcttattttcatacgttctcttgtatagcttataaatacaacttatagcatatacaaaaaacaatttaactttattttatcattttctttagata 15757776  T
Q  269 tagcttatgt 278  Q
    ||||||||||    
T  15757777 tagcttatgt 15757786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 66 - 300
Target Start/End: Original strand, 10619135 - 10619364
Alignment:
Q  66 ggcctgtttggattggcttatttgagctcatctattagcataagtttagtgaaaccgtcatggaaaacttatgaaaacagcttctgacaattttcacaag 165  Q
    ||||||||||||||| || ||||||| | ||||| |  || |||||| |||| |||     ||| |||| ||||||||||||| || |||||||| | ||    
T  10619135 ggcctgtttggattgactcatttgagtttatctactgacacaagttttgtgagaccccttgggagaactcatgaaaacagcttatgtcaattttctcgag 10619234  T
Q  166 cttttttcagcttattttcataagttctccaaaatagcttacaaaaacagctaatatcatacacaaaaacaatttagcttcattttatctttctctataa 265  Q
    | ||||||||||||||||||||||| ||||||  ||||||| ||| ||| ||  |||      | ||||||||||| |||  |||||||||| |||||||    
T  10619235 catttttcagcttattttcataagtactccaatctagcttataaacacaacttgtat-----gcgaaaacaatttaactttgttttatctttttctataa 10619329  T
Q  266 agatagcttatgtataagcgcttatcataataagc 300  Q
    | |||||| |||||| |||||||||||| ||||||    
T  10619330 aaatagctaatgtatgagcgcttatcatgataagc 10619364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 70 - 257
Target Start/End: Complemental strand, 2416464 - 2416277
Alignment:
Q  70 tgtttggattggcttatttgagctcatctattagcataagtttagtgaaaccgtcatggaa-aacttatgaaaacagcttctgacaattttcacaagctt 168  Q
    ||||| ||||| |||||||||| | ||||| || ||||||||| ||||||| | | ||||| ||||||| |||||||||| || || | ||||||||||     
T  2416464 tgtttagattgacttatttgagtttatctactaacataagttttgtgaaactg-cttggaagaacttattaaaacagcttttgtcattgttcacaagcta 2416366  T
Q  169 ttttcagcttattttcataagttctccaaaatagcttacaaaaacagctaatatcatacacaaaaacaatttagcttcattttatcttt 257  Q
     ||||||| || ||||||||||||||  | ||| |||| |||||||||| ||| | || |  ||||||||||| |||||||||||||||    
T  2416365 atttcagcatactttcataagttctcttatataacttataaaaacagcttatagcttatatcaaaacaatttaacttcattttatcttt 2416277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 66 - 203
Target Start/End: Original strand, 7928213 - 7928351
Alignment:
Q  66 ggcctgtttggattggcttatttgagctcatctattagcataagtttagtgaaaccgtcatggaaaacttatgaaaacagcttct-gacaattttcacaa 164  Q
    |||||||||||||||||||||||||||| |||||||  ||||||||  |||| || || |   | ||||| |||||||||||| | |||| | |||| ||    
T  7928213 ggcctgtttggattggcttatttgagcttatctattgacataagttgtgtgagactgttagaaagaacttttgaaaacagcttatggacattgttcataa 7928312  T
Q  165 gcttttttcagcttattttcataagttctccaaaatagc 203  Q
    | | ||||||||||||||||||||||||||||| |||||    
T  7928313 gttgttttcagcttattttcataagttctccaagatagc 7928351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 126 - 275
Target Start/End: Original strand, 23974468 - 23974614
Alignment:
Q  126 tggaaaacttatgaaaacagcttctgacaattttcacaagcttttttcagcttattttcataagttctccaaaatagcttacaaaaacagctaatatcat 225  Q
    |||| |||||||||||||||||| |||||||||||||||| ||||||  ||| |||||||||||||||| || ||||||||  |||| |||| ||| | |    
T  23974468 tggagaacttatgaaaacagcttatgacaattttcacaag-tttttttggctcattttcataagttctcaaatatagcttaagaaaaaagcttataacgt 23974566  T
Q  226 acacaaaaacaatttagcttcattttatctttctctataaagatagctta 275  Q
    | | |||| ||||||| ||  ||||| ||||| |||||||| ||||||||    
T  23974567 ataaaaaagcaatttaact--attttgtctttttctataaaaatagctta 23974614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 67 - 241
Target Start/End: Original strand, 39659425 - 39659599
Alignment:
Q  67 gcctgtttggattggcttatttgagctcatctattagcataagtttagtgaaaccgtcatggaaaacttatgaaaacagcttctgacaattttcacaagc 166  Q
    ||||||||||||||||||  ||||||| ||||| |  ||||||||| ||||  | |||   || |||||| ||||||||||| |||||| |||   ||||    
T  39659425 gcctgtttggattggcttgcttgagcttatctactgacataagtttcgtgaggctgtctgagagaacttacgaaaacagcttatgacaaattttctaagc 39659524  T
Q  167 ttttttcagcttattttcataagttctccaaaatagcttacaaaaacagctaatatcatacacaaaaacaattta 241  Q
    |||| ||| ||||| ||||||||||||| || |||||||| |||||||  | ||| |||| ||||||||||||||    
T  39659525 ttttgtcaccttatcttcataagttctctaatatagcttataaaaacaagttataacatagacaaaaacaattta 39659599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 164 - 279
Target Start/End: Original strand, 42868479 - 42868589
Alignment:
Q  164 agcttttttcagcttattttcataagttctccaaaatagcttacaaaaacagctaatatcatacacaaaaacaatttagcttcattttatctttctctat 263  Q
    |||||||||||||||||||||||||||||||||| ||| ||||| |||| ||||    | ||| |||||||||||||| ||| ||||||||||| |||||    
T  42868479 agcttttttcagcttattttcataagttctccaatataacttac-aaaatagct----taatatacaaaaacaatttaactttattttatctttttctat 42868573  T
Q  264 aaagatagcttatgta 279  Q
     || ||||||||||||    
T  42868574 gaaaatagcttatgta 42868589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 134 - 214
Target Start/End: Complemental strand, 26202115 - 26202035
Alignment:
Q  134 ttatgaaaacagcttctgacaattttcacaagcttttttcagcttattttcataagttctccaaaatagcttacaaaaaca 214  Q
    |||||| |||| ||| |||||||||||| |||||||||||| |||||||||||||||||||||| ||| |||| |||||||    
T  26202115 ttatgagaacaacttatgacaattttcataagcttttttcaacttattttcataagttctccaatatatcttataaaaaca 26202035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 163 - 279
Target Start/End: Original strand, 41241144 - 41241260
Alignment:
Q  163 aagcttttttcagcttattttcataagttctccaaaatagcttacaaaaacagctaatatcatacacaaaaacaatttagcttcattttatctttctcta 262  Q
    ||||||||||||||||| ||||| ||||| ||||| ||| ||||  |||||  || ||| |||| |||||||||||||| |||||||||||||||  |||    
T  41241144 aagcttttttcagcttaatttcacaagttttccaagataacttaggaaaactacttatagcatatacaaaaacaatttaacttcattttatcttttccta 41241243  T
Q  263 taaagatagcttatgta 279  Q
    || | ||||||||||||    
T  41241244 tagaaatagcttatgta 41241260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 134 - 257
Target Start/End: Complemental strand, 41851622 - 41851499
Alignment:
Q  134 ttatgaaaacagcttctgacaattttcacaagcttttttcagcttattttcataagttctccaaaatagcttacaaaaacagctaatatcatacacaaaa 233  Q
    ||||| ||||| ||| ||||| |||||| |||||||| |||||||| |||||||| |||||||| |||||||   |||||| || ||| |||| ||||||    
T  41851622 ttatggaaacaacttatgacacttttcataagcttttctcagcttaatttcataaattctccaagatagcttctgaaaacaacttatagcatatacaaaa 41851523  T
Q  234 acaatttagcttcattttatcttt 257  Q
    |||||||| ||| ||| |||||||    
T  41851522 acaatttaactttattgtatcttt 41851499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 104 - 250
Target Start/End: Complemental strand, 18066245 - 18066099
Alignment:
Q  104 cataagtttagtgaaaccgtcatggaaaacttatgaaaacagcttctgacaattttcacaagcttttttcagcttattttcataagttctccaaaatagc 203  Q
    ||||||||| ||||||| ||  || | |||||||||||||||||| ||||| |  ||| ||||| |||||| ||||||||| |||||||||||| |||||    
T  18066245 cataagttttgtgaaactgttttgtacaacttatgaaaacagcttatgacattgctcataagctattttcaccttattttcttaagttctccaagatagc 18066146  T
Q  204 ttacaaaaacagctaatatcatacacaaaaacaatttagcttcattt 250  Q
    |||  ||||||||| ||| | || |  ||||||||||| ||| ||||    
T  18066145 ttatgaaaacagcttatagcttatatgaaaacaatttaactttattt 18066099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 133 - 251
Target Start/End: Complemental strand, 40279285 - 40279167
Alignment:
Q  133 cttatgaaaacagcttctgacaattttcacaagcttttttcagcttattttcataagttctccaaaatagcttacaaaaacagctaatatcatacacaaa 232  Q
    |||||||||||| ||| || || | |||| || || ||||||||| ||||||||||||||||||| ||||||||  |||||| || ||||| || || ||    
T  40279285 cttatgaaaacaacttatggcattgttcataaactattttcagctaattttcataagttctccaacatagcttatgaaaacaacttatatcttataccaa 40279186  T
Q  233 aacaatttagcttcatttt 251  Q
    ||||||||| |||||||||    
T  40279185 aacaatttaacttcatttt 40279167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 70 - 279
Target Start/End: Original strand, 41812011 - 41812218
Alignment:
Q  70 tgtttggattggcttatttgagctcatctattagcataagtttagtgaaaccgtcatggaaaacttatgaaaacagcttctgacaattttcacaagcttt 169  Q
    |||||||||||||||||||||||| ||||     || |||||||||||  | ||   ||| ||||| |||||||||||| ||||| |||||| |||||||    
T  41812011 tgtttggattggcttatttgagcttatctgcagtcaaaagtttagtgaggctgtttgggagaacttttgaaaacagcttatgacatttttcataagcttt 41812110  T
Q  170 tttcagcttattttcataagttctccaaaatagcttacaaaaacagctaatatcatacacaaaaacaatttagcttcattttatctttctctataaagat 269  Q
    ||||| |||| |||| |||||| ||||| |||||||    ||||| ||  || |||| |||||||||||||| |||||||||| | ||  | ||||| ||    
T  41812111 tttcaactta-tttcctaagttttccaagatagctt-ttgaaacatcttgtagcatatacaaaaacaatttaacttcattttaccatttgccataaaaat 41812208  T
Q  270 agcttatgta 279  Q
    ||||||||||    
T  41812209 agcttatgta 41812218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 66 - 206
Target Start/End: Complemental strand, 4607080 - 4606940
Alignment:
Q  66 ggcctgtttggattggcttatttgagctcatctattagcataagtttagtgaaaccgtcatggaaaacttatgaaaacagcttctgacaattttcacaag 165  Q
    |||||||||||||||||||||||||||| |||||  |  |||||||| |||| ||  |   ||| ||||| |||||||| ||| ||||| | ||||  ||    
T  4607080 ggcctgtttggattggcttatttgagcttatctaccaatataagttttgtgagactatttgggagaacttgtgaaaacaacttatgacattgttcatgag 4606981  T
Q  166 cttttttcagcttattttcataagttctccaaaatagctta 206  Q
    ||  ||| |||||||||||||||||||||||| ||||||||    
T  4606980 ctgcttttagcttattttcataagttctccaagatagctta 4606940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 131 - 257
Target Start/End: Complemental strand, 16451208 - 16451089
Alignment:
Q  131 aacttatgaaaacagcttctgacaattttcacaagcttttttcagcttattttcataagttctccaaaatagcttacaaaaacagctaatatcatacaca 230  Q
    |||||||||||||| ||| ||||| | ||||  |||| |||||||||||||||||  |||||||||| ||||||||| ||||||||| ||||            
T  16451208 aacttatgaaaacaacttatgacattgttcatgagctgttttcagcttattttcacgagttctccaagatagcttacgaaaacagcttatat-------g 16451116  T
Q  231 aaaacaatttagcttcattttatcttt 257  Q
    ||||||||||| |||||||||||||||    
T  16451115 aaaacaatttaacttcattttatcttt 16451089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 62 - 214
Target Start/End: Complemental strand, 20952514 - 20952362
Alignment:
Q  62 atatggcctgtttggattggcttatttgagctcatctattagcataagtttagtgaaaccgtcatggaaaacttatgaaaacagcttctgacaattttca 161  Q
    ||||||| ||||||||||| |||||||||||| || || | ||| |||||| || | ||  |    || ||||||||||||||| || || |||||||||    
T  20952514 atatggcatgtttggattgacttatttgagcttatatactggcaaaagttttgttagactatttaagagaacttatgaaaacagtttatgccaattttca 20952415  T
Q  162 caagcttttttcagcttattttcataagttctccaaaatagcttacaaaaaca 214  Q
      | ||||||||| |||||||||||||||||||||| |||||| | |||||||    
T  20952414 ttaacttttttcaacttattttcataagttctccaatatagctaataaaaaca 20952362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 139 - 257
Target Start/End: Complemental strand, 12289879 - 12289760
Alignment:
Q  139 aaaacagcttctgacaattttcacaagcttttttcagcttattttcataagttctccaaaatagcttacaaaaacagctaatatcataca-caaaaacaa 237  Q
    ||||||| || ||||||| |||| |||||||||||| |||||||||||||||||||||| |||  ||| ||||||| || ||| |||  | |||||||||    
T  12289879 aaaacagtttatgacaatattcataagcttttttcaacttattttcataagttctccaatataaattataaaaacaacttataacatgtaccaaaaacaa 12289780  T
Q  238 tttagcttcattttatcttt 257  Q
    ||||   |||||||||||||    
T  12289779 tttaatgtcattttatcttt 12289760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 152 - 206
Target Start/End: Complemental strand, 40835597 - 40835543
Alignment:
Q  152 acaattttcacaagcttttttcagcttattttcataagttctccaaaatagctta 206  Q
    |||||||||||||||||||||  ||||||||||||||||||||||| ||||||||    
T  40835597 acaattttcacaagctttttttggcttattttcataagttctccaatatagctta 40835543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 169 - 302
Target Start/End: Complemental strand, 4026869 - 4026736
Alignment:
Q  169 ttttcagcttattttcataagttctccaaaatagcttacaaaaacagctaatatcatacacaaaaacaatttagcttcattttatctttctctataaaga 268  Q
    ||||||||||||||||||||||||| ||  |||  |||  ||||||||| |||   ||  |||||| |||||| ||| |||||||||||  ||||||| |    
T  4026869 ttttcagcttattttcataagttcttcaggataatttatgaaaacagcttataatttatgcaaaaataatttaactttattttatcttttgctataaaaa 4026770  T
Q  269 tagcttatgtataagcgcttatcataataagctg 302  Q
    ||||||||  |||||| |||||||| ||||||||    
T  4026769 tagcttatagataagcacttatcatgataagctg 4026736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 133 - 257
Target Start/End: Original strand, 11201363 - 11201488
Alignment:
Q  133 cttatgaaaacagcttctgacaattttcacaagcttttttcagcttatttt-cataagttctccaaaatagcttacaaaaacagctaatatcatacacaa 231  Q
    |||||||||| || || |||||| ||||| |||||||||||| || ||||| |||||||||||||| ||||  |||||||||| || |||  ||| ||||    
T  11201363 cttatgaaaatagtttatgacaactttcataagcttttttcaactcatttttcataagttctccaatatagtatacaaaaacaacttatagtatatacaa 11201462  T
Q  232 aaacaatttagcttcattttatcttt 257  Q
    |||||||||  | | |||||||||||    
T  11201463 aaacaattttaccttattttatcttt 11201488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 72 - 197
Target Start/End: Original strand, 1633421 - 1633538
Alignment:
Q  72 tttggattggcttatttgagctcatctattagcataagtttagtgaaaccgtcatggaaaacttatgaaaacagcttctgacaattttcacaagcttttt 171  Q
    ||||||||  |||||||||| | ||||| |||||||||||| || | || || | ||| ||||||||||||||        |||||||||| ||| ||||    
T  1633421 tttggatttacttatttgagtttatctactagcataagttttgttatactgttagggagaacttatgaaaaca--------caattttcactagcctttt 1633512  T
Q  172 tcagcttattttcataagttctccaa 197  Q
    ||||||||||||||||||||||||||    
T  1633513 tcagcttattttcataagttctccaa 1633538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 139 - 279
Target Start/End: Complemental strand, 2227248 - 2227108
Alignment:
Q  139 aaaacagcttctgacaattttcacaagcttttttcagcttattttcataagttctccaaaatagcttacaaaaacagctaatatcatacacaaaaacaat 238  Q
    |||||||||| ||||| |||||| || | ||||||||||||||||| |||||||| |||||||  | |   ||||| || ||| ||||||||||||||||    
T  2227248 aaaacagcttatgacatttttcataaacatttttcagcttattttcgtaagttctacaaaatatttaagggaaacaacttataacatacacaaaaacaat 2227149  T
Q  239 ttagcttcattttatctttctctataaagatagcttatgta 279  Q
    ||   || |||||||||||  | ||| | ||||||||||||    
T  2227148 tttattttattttatcttttaccatagaaatagcttatgta 2227108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 73 - 197
Target Start/End: Original strand, 31561664 - 31561788
Alignment:
Q  73 ttggattggcttatttgagctcatctattagcataagtttagtgaaaccgtcatggaaaacttatgaaaacagcttctgacaattttcacaagctttttt 172  Q
    |||||||| |||||||||| | ||||| || ||||||||| || |||| ||   ||||||||| |||||||||| | ||||  |||||| ||| || |||    
T  31561664 ttggattgacttatttgagattatctactaacataagttttgtaaaactgtttgggaaaacttttgaaaacagcatatgacgtttttcataagattgttt 31561763  T
Q  173 cagcttattttcataagttctccaa 197  Q
     |||||| |||||||||||||||||    
T  31561764 aagcttactttcataagttctccaa 31561788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 169 - 257
Target Start/End: Complemental strand, 42458000 - 42457912
Alignment:
Q  169 ttttcagcttattttcataagttctccaaaatagcttacaaaaacagctaatatcatacacaaaaacaatttagcttcattttatcttt 257  Q
    ||||||||||||||||||| |||||| || ||||||||  || |||||||| | | || |||||||||||||| ||| |||||||||||    
T  42458000 ttttcagcttattttcatatgttctctaagatagcttatgaatacagctaagagcttaaacaaaaacaatttaactttattttatcttt 42457912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 131 - 250
Target Start/End: Complemental strand, 1625990 - 1625871
Alignment:
Q  131 aacttatgaaaacagcttctgacaattttcacaagcttttttcagcttattttcataagttctccaaaatagcttacaaaaacagctaatatcatacaca 230  Q
    |||||||||||  ||||| ||||||| |||| ||| | ||||||||| |||||| |||||||||||| ||||||||  |||||| || ||| | || ||     
T  1625990 aacttatgaaagtagcttatgacaatgttcataagatgttttcagctgattttcgtaagttctccaagatagcttatgaaaacaacttataacttatacg 1625891  T
Q  231 aaaacaatttagcttcattt 250  Q
    ||||||||||| ||| ||||    
T  1625890 aaaacaatttaactttattt 1625871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 131 - 210
Target Start/End: Original strand, 28677640 - 28677718
Alignment:
Q  131 aacttatgaaaacagcttctgacaattttcacaagcttttttcagcttattttcataagttctccaaaatagcttacaaa 210  Q
    |||||||||||||||||| ||||| |||||| ||| | ||||| |||||||| |||||| ||||||||||| ||||||||    
T  28677640 aacttatgaaaacagcttatgaca-ttttcataagttgttttcggcttatttccataagctctccaaaataacttacaaa 28677718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 72 - 241
Target Start/End: Original strand, 33319737 - 33319902
Alignment:
Q  72 tttggattggcttatttgagctcatctattagcataagtttagtgaaaccgtcatggaaaacttatgaaaacagcttctgacaattttcacaagcttttt 171  Q
    ||||||||||||||||||||||  |||| | |||||||||  |||| || ||   ||| ||||| |  ||| ||||| |||||  ||| | |||||||||    
T  33319737 tttggattggcttatttgagcttgtctactggcataagtt--gtgagactgtttgggagaacttttataaatagcttatgaca--tttaataagcttttt 33319832  T
Q  172 tcagcttattttcataagttctccaaaatagcttacaaaaacagctaatatcatacacaaaaacaattta 241  Q
    |||||||||||||||||||||||||| |||| |||  ||||||| | |||  ||| ||||||||| ||||    
T  33319833 tcagcttattttcataagttctccaagatagtttatgaaaacagtttatagtatatacaaaaacagttta 33319902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 68 - 217
Target Start/End: Original strand, 26143559 - 26143706
Alignment:
Q  68 cctgtttggattggcttatttgagctcatctattagcataagtttagtgaaaccgtcatggaaaacttatgaaaacagcttctgacaattttcacaagct 167  Q
    ||||||||||||||||| |||||||| ||||| |  ||||| |||  ||| || ||   ||| |||||| ||||||| ||| || || | |||||| | |    
T  26143559 cctgtttggattggcttgtttgagcttatctactgacataaattt--tgagactgtttgggagaacttacgaaaacaacttatgtcattgttcacaggtt 26143656  T
Q  168 tttttcagcttattttcataagttctccaaaatagcttacaaaaacagct 217  Q
     |||||||||||||||||||||||||||||  |||||||  |||||||||    
T  26143657 attttcagcttattttcataagttctccaagttagcttatgaaaacagct 26143706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 175 - 237
Target Start/End: Original strand, 27695619 - 27695681
Alignment:
Q  175 gcttattttcataagttctccaaaatagcttacaaaaacagctaatatcatacacaaaaacaa 237  Q
    ||||||||||| |||||| |||| |||||||| |||||||||| |||||||| ||||||||||    
T  27695619 gcttattttcacaagttccccaatatagcttataaaaacagcttatatcatatacaaaaacaa 27695681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 70 - 228
Target Start/End: Complemental strand, 30331902 - 30331753
Alignment:
Q  70 tgtttggattggcttatttgagctcatctattagcataagtttagtgaaaccgtcatggaaaacttatgaaaacagcttctgacaattttcacaagcttt 169  Q
    ||||||||||| ||||||| |||| ||||| |  ||||||||| |||| || ||   ||| |||||||||||| | ||| ||||||||||||||||||      
T  30331902 tgtttggattgacttatttcagcttatctactgacataagttttgtgagactgtttgggagaacttatgaaaaaaccttatgacaattttcacaagct-- 30331805  T
Q  170 tttcagcttattttcataagttctccaaaatagcttacaaaaacagctaatatcataca 228  Q
           ||||||||||||||||||||| ||| |||| ||||| |||| ||| ||||||    
T  30331804 -------ttattttcataagttctccaatatatcttataaaaatagcttatagcataca 30331753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 129 - 203
Target Start/End: Complemental strand, 33981214 - 33981140
Alignment:
Q  129 aaaacttatgaaaacagcttctgacaattttcacaagcttttttcagcttattttcataagttctccaaaatagc 203  Q
    ||||||||||||||| |||| |||||  ||||| |||||||||||| |||| |||||||| |||||||| |||||    
T  33981214 aaaacttatgaaaacggcttatgacacatttcataagcttttttcaacttaatttcataaattctccaagatagc 33981140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 134 - 239
Target Start/End: Original strand, 5745768 - 5745873
Alignment:
Q  134 ttatgaaaacagcttctgacaattttcacaagcttttttcagcttattttcataagttctccaaaatagcttacaaaaacagctaatatcatacacaaaa 233  Q
    ||||||||||||||| |||||||||||| ||||||||| || || |||||| ||||| ||| || |||||||| | ||| | || ||| |||| | ||||    
T  5745768 ttatgaaaacagcttatgacaattttcataagctttttccaactaattttcctaagtcctcaaatatagcttatagaaataacttatagcatataaaaaa 5745867  T
Q  234 acaatt 239  Q
    ||||||    
T  5745868 acaatt 5745873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 131 - 267
Target Start/End: Complemental strand, 26626963 - 26626826
Alignment:
Q  131 aacttatgaaaacagcttctgacaattttcacaagcttttttcagcttattttcataagttctccaaaatagcttacaaaaacagctaatatcatacaca 230  Q
    |||||| ||||| ||||| ||||| | |||| || || ||||||| ||||||||||||||||| ||| ||||||||  |||||||||  || | || ||     
T  26626963 aacttacgaaaatagcttatgacattgttcataatctgttttcaggttattttcataagttctgcaagatagcttatgaaaacagcttctagcttatacg 26626864  T
Q  231 aaaacaatttagc-ttcattttatctttctctataaag 267  Q
    ||||||||||| | ||| ||||||||||  ||||||||    
T  26626863 aaaacaatttaactttcgttttatcttttgctataaag 26626826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 219 - 300
Target Start/End: Original strand, 42420362 - 42420443
Alignment:
Q  219 atatcatacacaaaaacaatttagcttcattttatctttctctataaagatagcttatgtataagcgcttatcataataagc 300  Q
    |||||||| |||||||||||||| | | |||||||||||  ||||||| |||||||||   |||||||||||||| ||||||    
T  42420362 atatcatatacaaaaacaatttaacgttattttatcttttgctataaaaatagcttatacgtaagcgcttatcatgataagc 42420443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 150 - 206
Target Start/End: Complemental strand, 12195023 - 12194967
Alignment:
Q  150 tgacaattttcacaagcttttttcagcttattttcataagttctccaaaatagctta 206  Q
    |||||||||||| |||||||||||| |||||||||| ||||||||||| ||| ||||    
T  12195023 tgacaattttcataagcttttttcaacttattttcacaagttctccaatataactta 12194967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 150 - 206
Target Start/End: Complemental strand, 20926574 - 20926518
Alignment:
Q  150 tgacaattttcacaagcttttttcagcttattttcataagttctccaaaatagctta 206  Q
    ||||||||||||  ||||||||||| ||||||||||||||||||| || ||||||||    
T  20926574 tgacaattttcattagcttttttcaacttattttcataagttctctaatatagctta 20926518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 136 - 266
Target Start/End: Original strand, 423677 - 423808
Alignment:
Q  136 atgaaaacagcttctgacaattttcacaagcttttttcag-cttattttcataagttctccaaaatagcttacaaaaacagctaatatcatacacaaaaa 234  Q
    ||||||||||||| |||||||||| ||||| ||||||    |||| ||||||||||| ||||| |||||| |   ||||||||  || |||||| |||||    
T  423677 atgaaaacagcttatgacaatttttacaagttttttttttacttactttcataagttgtccaatatagctgattgaaacagcttttagcatacataaaaa 423776  T
Q  235 caatttagcttcattttatctttctctataaa 266  Q
    |||| || |||  |||||||||| ||||||||    
T  423777 caatataacttagttttatctttttctataaa 423808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 131 - 206
Target Start/End: Complemental strand, 750760 - 750685
Alignment:
Q  131 aacttatgaaaacagcttctgacaattttcacaagcttttttcagcttattttcataagttctccaaaatagctta 206  Q
    |||||||||||| ||||  ||||| | |||| ||||| |||| ||||||||| |||||||||||||| ||||||||    
T  750760 aacttatgaaaagagctaatgacattgttcataagctgttttgagcttatttgcataagttctccaagatagctta 750685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 173 - 276
Target Start/End: Complemental strand, 2196009 - 2195906
Alignment:
Q  173 cagcttattttcataagttctccaaaatagcttacaaaaacagctaatatcatacacaaaaacaatttagcttcattttatctttctctataaagatagc 272  Q
    |||||||||||| |||| | ||| |||||||||  ||||||| || ||| ||| |  || || |||||| ||||||||||||||| |||||||| |||||    
T  2196009 cagcttattttcgtaagctatccgaaatagcttgtaaaaacaccttatagcatgctaaagaataatttaacttcattttatctttttctataaaaatagc 2195910  T
Q  273 ttat 276  Q
    ||||    
T  2195909 ttat 2195906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 174 - 217
Target Start/End: Original strand, 6167306 - 6167349
Alignment:
Q  174 agcttattttcataagttctccaaaatagcttacaaaaacagct 217  Q
    ||||||||| ||||||||||||||||||||||| ||||||||||    
T  6167306 agcttatttccataagttctccaaaatagcttataaaaacagct 6167349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 131 - 194
Target Start/End: Complemental strand, 13325660 - 13325597
Alignment:
Q  131 aacttatgaaaacagcttctgacaattttcacaagcttttttcagcttattttcataagttctc 194  Q
    ||||| |||||||||||| ||||| ||  || ||||||||||||||| ||||||||||||||||    
T  13325660 aacttttgaaaacagcttatgacatttcacataagcttttttcagctcattttcataagttctc 13325597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 135 - 206
Target Start/End: Complemental strand, 36125447 - 36125376
Alignment:
Q  135 tatgaaaacagcttctgacaattttcacaagcttttttcagcttattttcataagttctccaaaatagctta 206  Q
    |||||||||||||| |  ||||||||  |||||||||| | ||||||||||||||||||||||  |||||||    
T  36125447 tatgaaaacagcttattgcaattttcgtaagctttttttaacttattttcataagttctccaatttagctta 36125376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 150 - 257
Target Start/End: Original strand, 39073688 - 39073795
Alignment:
Q  150 tgacaattttcacaagcttttttcagcttattttcataagttctccaaaatagcttacaaaaacagctaatatcatacacaaaaacaatttagcttcatt 249  Q
    |||||||||||| ||| ||  |||| ||||||||||  |||||||||| |||||||| |||||   || ||| |||| |||||||||||||| | | |||    
T  39073688 tgacaattttcataagtttcgttcaacttattttcactagttctccaatatagcttataaaaattacttatagcatatacaaaaacaatttaacgttatt 39073787  T
Q  250 ttatcttt 257  Q
    ||||||||    
T  39073788 ttatcttt 39073795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 139 - 293
Target Start/End: Complemental strand, 3611308 - 3611154
Alignment:
Q  139 aaaacagcttctgacaattttcacaagcttttttcagcttattttcataagttctccaaaatagcttacaaaaacagctaatatcatacacaaaaacaat 238  Q
    |||||| ||| ||||| | |||| || || |||| |||||||||||||||||||||||| |||||||   |||||||   |||   || |||||||||||    
T  3611308 aaaacaacttatgacattattcataaactgtttttagcttattttcataagttctccaagatagcttgtgaaaacagtctataaactatacaaaaacaat 3611209  T
Q  239 ttagcttcattttatctttctctataaagatagcttatgtataagcgcttatcat 293  Q
    ||| ||| |||||| ||||  ||||| | ||| |||||  |||||| ||||||||    
T  3611208 ttaactttattttaccttttgctatagaaataacttatacataagcacttatcat 3611154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 131 - 221
Target Start/End: Original strand, 35378513 - 35378602
Alignment:
Q  131 aacttatgaaaacagcttctgacaattttcacaagcttttttcagcttattttcataagttctccaaaatagcttacaaaaacagctaata 221  Q
    |||||||||||||||||  ||||  | |||| ||| | ||||||||||||||||||||| | ||||| || |||||| |||||||||||||    
T  35378513 aacttatgaaaacagctgatgact-tgttcataagttattttcagcttattttcataagctatccaagattgcttacgaaaacagctaata 35378602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 131 - 189
Target Start/End: Complemental strand, 43570503 - 43570446
Alignment:
Q  131 aacttatgaaaacagcttctgacaattttcacaagcttttttcagcttattttcataag 189  Q
    |||||||||||||||||| ||||| | |||| |||||||||| ||||||||||||||||    
T  43570503 aacttatgaaaacagcttatgacattgttcataagctttttt-agcttattttcataag 43570446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 163 - 264
Target Start/End: Complemental strand, 9395188 - 9395087
Alignment:
Q  163 aagcttttttcagcttattttcataagttctccaaaatagcttacaaaaacagctaatatcatacacaaaaacaatttagcttcattttatctttctcta 262  Q
    ||||| ||||||||||||||||||||| ||| || |||| || |  ||||||||| |||   || |  ||||||||||||||| ||||||||||| ||||    
T  9395188 aagctgttttcagcttattttcataagctctacagaataactaatgaaaacagcttatagattatatgaaaacaatttagctttattttatctttttcta 9395089  T
Q  263 ta 264  Q
    ||    
T  9395088 ta 9395087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 133 - 206
Target Start/End: Complemental strand, 40279355 - 40279282
Alignment:
Q  133 cttatgaaaacagcttctgacaattttcacaagcttttttcagcttattttcataagttctccaaaatagctta 206  Q
    |||||||||||| ||| || || | |||| || || ||||||||| ||||||||||||||||||| ||||||||    
T  40279355 cttatgaaaacaacttatggcattgttcataaactgttttcagctaattttcataagttctccaatatagctta 40279282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 133 - 206
Target Start/End: Complemental strand, 40279425 - 40279352
Alignment:
Q  133 cttatgaaaacagcttctgacaattttcacaagcttttttcagcttattttcataagttctccaaaatagctta 206  Q
    |||||||||||| ||| || || | |||| || || ||||||||| ||||||||||||||||||| ||||||||    
T  40279425 cttatgaaaacaacttatggcattgttcataaactgttttcagctaattttcataagttctccaatatagctta 40279352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 169 - 217
Target Start/End: Original strand, 1893299 - 1893347
Alignment:
Q  169 ttttcagcttattttcataagttctccaaaatagcttacaaaaacagct 217  Q
    ||||||||||||||||| ||||||||||| ||||||| | |||||||||    
T  1893299 ttttcagcttattttcacaagttctccaagatagcttccgaaaacagct 1893347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 64 - 299
Target Start/End: Complemental strand, 2142811 - 2142575
Alignment:
Q  64 atggcctgtttggattggcttatttgagctcatctattagcataagtttagtgaaaccgtcatggaaaacttatgaaaacagcttctgacaattttcaca 163  Q
    |||| |||||||| ||| |||||||||| | |||||   ||||||||||  ||| || ||   ||| ||||||||||||||  || ||||||| ||||      
T  2142811 atggtctgtttggtttgacttatttgagtttatctacatgcataagttttatgagactgtttgggagaacttatgaaaacaagttgtgacaatgttcatt 2142712  T
Q  164 agcttttttcagcttattttcataagttct-ccaaaatagcttacaaaaacagctaatatcatacacaaaaacaatttagcttcattttatctttctcta 262  Q
    |||| |||| ||||||||||||||| |||| |||| |||  |||  |||||| || ||| | || ||||||| ||| |||||| |||||| || |  |||    
T  2142711 agctgtttttagcttattttcataaattctcccaagataaattatgaaaacaacttatagcttatacaaaaataatctagctttattttacctattgcta 2142612  T
Q  263 taaagatagcttatgtataagcgcttatcataataag 299  Q
    ||   |||||||||  | ||||||||||||| |||||    
T  2142611 tagtaatagcttatacacaagcgcttatcatgataag 2142575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 133 - 189
Target Start/End: Original strand, 8820275 - 8820330
Alignment:
Q  133 cttatgaaaacagcttctgacaattttcacaagcttttttcagcttattttcataag 189  Q
    |||||| ||||||||||||||| | |||||||||| |||||||||||||| ||||||    
T  8820275 cttatggaaacagcttctgaca-tgttcacaagctgttttcagcttatttccataag 8820330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 66 - 98
Target Start/End: Complemental strand, 29936183 - 29936151
Alignment:
Q  66 ggcctgtttggattggcttatttgagctcatct 98  Q
    |||||||||||||||||||||||||||||||||    
T  29936183 ggcctgtttggattggcttatttgagctcatct 29936151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 66 - 206
Target Start/End: Complemental strand, 36534923 - 36534783
Alignment:
Q  66 ggcctgtttggattggcttatttgagctcatctattagcataagtttagtgaaaccgtcatggaaaacttatgaaaacagcttctgacaattttcacaag 165  Q
    ||||| ||| |||||||||||||||||| || |  |  ||||||||| |||| || ||   ||| |||||||||||||||||| | | | | |||| ||     
T  36534923 ggcctatttagattggcttatttgagcttatatgctttcataagttttgtgagactgtttgggataacttatgaaaacagcttataaaattgttcataat 36534824  T
Q  166 cttttttcagcttattttcataagttctccaaaatagctta 206  Q
    || |||||||||||||||||| | |||||| | ||||||||    
T  36534823 ctattttcagcttattttcattaattctcctatatagctta 36534783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 66 - 257
Target Start/End: Complemental strand, 41407457 - 41407265
Alignment:
Q  66 ggcctgtttggattggcttatttgagctcatctattagcataagtttagtgaaaccgtcatggaaaacttatgaaaacagcttctgacaattttcacaag 165  Q
    |||||||||||||||||||| ||||||| ||||| || ||||| |||  ||| ||     |  | ||||||| ||||| |||| || || |||||| |||    
T  41407457 ggcctgtttggattggcttacttgagcttatctagtaacataaattttctgatacaacttttaagaacttattaaaacggcttatggcatttttcataag 41407358  T
Q  166 cttttttcagcttattttcataagttctccaaaatagcttacaaaaacagctaatatcatacacaaaaa-caatttagcttcattttatcttt 257  Q
    ||| ||| || ||||||||| |||||||| || | | |||| ||||| | || ||| |||| ||||||| ||||||| ||| |||||||||||    
T  41407357 cttgtttaaggttattttcacaagttctcaaagaaaacttataaaaataacttatagcatatacaaaaaacaatttaactttattttatcttt 41407265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 131 - 214
Target Start/End: Original strand, 42420203 - 42420286
Alignment:
Q  131 aacttatgaaaacagcttctgacaattttcacaagcttttttcagc-ttattttcataagttctccaaaatagcttacaaaaaca 214  Q
    |||||| ||||||| ||| ||||||||||||  ||||||||||| | ||||||||||||| ||||||| |||||||  |||||||    
T  42420203 aacttacgaaaacaacttatgacaattttcattagcttttttcaactttattttcataag-tctccaatatagcttgtaaaaaca 42420286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 134 - 241
Target Start/End: Complemental strand, 680589 - 680483
Alignment:
Q  134 ttatgaaaacagcttctgacaattttcacaagcttttttcagcttattttcataagttctccaaaatagcttacaaaaacagctaatatcatacacaaaa 233  Q
    ||||||||||||||| |||||  ||| | || || ||||||||||||||||| ||||||| ||| ||||||||  |||| |||| ||| | || || |||    
T  680589 ttatgaaaacagcttatgacatgttt-ataaactgttttcagcttattttcacaagttcttcaagatagcttatgaaaatagcttatagcttatacgaaa 680491  T
Q  234 acaattta 241  Q
    ||||||||    
T  680490 acaattta 680483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 131 - 206
Target Start/End: Complemental strand, 1647325 - 1647251
Alignment:
Q  131 aacttatgaaaacagcttctgacaattttcacaagcttttttcagcttattttcataagttctccaaaatagctta 206  Q
    |||||||||||||||||| ||||| |  ||| ||||| |||||||||||||| |||||| |||| | |||||||||    
T  1647325 aacttatgaaaacagcttatgaca-tgctcataagctgttttcagcttatttccataagctctctataatagctta 1647251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #64
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 166 - 241
Target Start/End: Complemental strand, 1810719 - 1810645
Alignment:
Q  166 cttttttcagcttattttcataagttctccaaaatagcttacaaaaacagctaatatcatacacaaaaacaattta 241  Q
    |||||||||||||||||||||||  ||| ||| |||||||| ||||||| || ||| | || ||||||||||||||    
T  1810719 cttttttcagcttattttcataaactcttcaagatagcttataaaaacaact-ataacttatacaaaaacaattta 1810645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #65
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 62 - 217
Target Start/End: Complemental strand, 9174974 - 9174819
Alignment:
Q  62 atatggcctgtttggattggcttatttgagctcatctattagcataagtttagtgaaaccgtcatggaaaacttatgaaaacagcttctgacaattttca 161  Q
    ||||||||| ||||||||  |||||||||||| ||||||| |||||||||  |||| || ||    |    ||| | |||||| ||| ||||| | ||||    
T  9174974 atatggcctatttggatttacttatttgagcttatctattggcataagttatgtgagactgtttgagggggcttgttaaaacaacttatgacattgttca 9174875  T
Q  162 caagcttttttcagcttattttcataagttctccaaaatagcttacaaaaacagct 217  Q
     ||||| ||||||||||||||||||||| |||  || ||||||||  |||||||||    
T  9174874 taagctattttcagcttattttcataagctctgtaagatagcttatgaaaacagct 9174819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #66
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 152 - 239
Target Start/End: Complemental strand, 12795860 - 12795774
Alignment:
Q  152 acaattttcacaagcttttttcagcttattttcataagttctccaaaatagcttacaaaaacagctaatatcatacacaaaaacaatt 239  Q
    |||| ||||| ||||||||||| ||||| || |||||| || |||| |||||||| |||||||||| ||| |||| |||| |||||||    
T  12795860 acaactttcataagcttttttcggcttacttgcataagctcaccaatatagctta-aaaaacagcttatagcatatacaagaacaatt 12795774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #67
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 163 - 206
Target Start/End: Complemental strand, 16398172 - 16398129
Alignment:
Q  163 aagcttttttcagcttattttcataagttctccaaaatagctta 206  Q
    ||||| ||||||||||||||||||||||||||||| ||| ||||    
T  16398172 aagctgttttcagcttattttcataagttctccaacataactta 16398129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #68
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 131 - 206
Target Start/End: Original strand, 41293143 - 41293218
Alignment:
Q  131 aacttatgaaaacagcttctgacaattttcacaagcttttttcagcttattttcataagttctccaaaatagctta 206  Q
    ||||||| |||||||||| ||||| ||  || ||||| |||||||||||| ||||||||| |||||  ||||||||    
T  41293143 aacttataaaaacagcttatgacatttcgcataagctgttttcagcttatattcataagtactccaggatagctta 41293218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #69
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 66 - 117
Target Start/End: Original strand, 42868396 - 42868447
Alignment:
Q  66 ggcctgtttggattggcttatttgagctcatctattagcataagtttagtga 117  Q
    ||||||||||||||| |||||||||||| ||||||| ||||| |||| ||||    
T  42868396 ggcctgtttggattgccttatttgagcttatctattggcatacgtttcgtga 42868447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #70
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 139 - 217
Target Start/End: Original strand, 29316764 - 29316841
Alignment:
Q  139 aaaacagcttctgacaattttcacaagcttttttcagcttattttcataagttctccaaaatagcttacaaaaacagct 217  Q
    |||||||||| ||||| | |||| ||| | |||||||||||||| |||||||||||||| |||||| |  |||||||||    
T  29316764 aaaacagcttatgaca-tgttcataagttcttttcagcttatttccataagttctccaagatagctgatgaaaacagct 29316841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #71
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 67 - 109
Target Start/End: Complemental strand, 33503152 - 33503110
Alignment:
Q  67 gcctgtttggattggcttatttgagctcatctattagcataag 109  Q
    ||||||||| ||||||||||||||||| ||||| |||||||||    
T  33503152 gcctgtttgtattggcttatttgagcttatctactagcataag 33503110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #72
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 168 - 206
Target Start/End: Complemental strand, 42419859 - 42419821
Alignment:
Q  168 tttttcagcttattttcataagttctccaaaatagctta 206  Q
    |||||||||||||||||||||||| || |||||||||||    
T  42419859 tttttcagcttattttcataagttttctaaaatagctta 42419821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #73
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 163 - 216
Target Start/End: Original strand, 6718546 - 6718598
Alignment:
Q  163 aagcttttttcagcttattttcataagttctccaaaatagcttacaaaaacagc 216  Q
    ||||| ||||||||||||||||||||||| ||||| ||| |||| |||||||||    
T  6718546 aagctgttttcagcttattttcataagtt-tccaagatatcttataaaaacagc 6718598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #74
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 131 - 212
Target Start/End: Original strand, 7035547 - 7035628
Alignment:
Q  131 aacttatgaaaacagcttctgacaattttcacaagcttttttcagcttattttcataagttctccaaaatagcttacaaaaa 212  Q
    |||||||| ||||||||| |||||   |||| ||| | ||||| ||||||||||||||||| ||||| |||| ||| |||||    
T  7035547 aacttatggaaacagcttatgacacagttcataaggtgttttccgcttattttcataagttttccaagatagtttataaaaa 7035628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #75
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 169 - 206
Target Start/End: Original strand, 10646307 - 10646344
Alignment:
Q  169 ttttcagcttattttcataagttctccaaaatagctta 206  Q
    |||||| ||||||||||||||||||| |||||||||||    
T  10646307 ttttcatcttattttcataagttctctaaaatagctta 10646344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #76
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 169 - 206
Target Start/End: Complemental strand, 15978037 - 15978000
Alignment:
Q  169 ttttcagcttattttcataagttctccaaaatagctta 206  Q
    ||||||||||||||||||||  ||||||||||||||||    
T  15978037 ttttcagcttattttcataatctctccaaaatagctta 15978000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #77
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 69 - 122
Target Start/End: Complemental strand, 18179101 - 18179048
Alignment:
Q  69 ctgtttggattggcttatttgagctcatctattagcataagtttagtgaaaccg 122  Q
    |||||||||||| |||||||||||| ||||| || ||||||||| |||| ||||    
T  18179101 ctgtttggattgacttatttgagcttatctactaacataagttttgtgagaccg 18179048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #78
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 179 - 276
Target Start/End: Complemental strand, 28206309 - 28206212
Alignment:
Q  179 attttcataagttctccaaaatagcttacaaaaacagctaatatcatacacaaaaacaatttagcttcattttatctttctctataaagatagcttat 276  Q
    ||||| ||||||||||||| |||||||| |||||||  | ||| |||| | ||||| |||||| | || ||||||||||   |||||| |||||||||    
T  28206309 atttttataagttctccaatatagcttataaaaacaatttataacatataaaaaaataatttaacatcgttttatcttttgatataaaaatagcttat 28206212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #79
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 169 - 206
Target Start/End: Original strand, 35379034 - 35379071
Alignment:
Q  169 ttttcagcttattttcataagttctccaaaatagctta 206  Q
    ||||||||||||||||||||| ||||||| ||||||||    
T  35379034 ttttcagcttattttcataagctctccaagatagctta 35379071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #80
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 169 - 206
Target Start/End: Complemental strand, 40279459 - 40279422
Alignment:
Q  169 ttttcagcttattttcataagttctccaaaatagctta 206  Q
    |||||| |||||||||||||||||||||| ||||||||    
T  40279459 ttttcaacttattttcataagttctccaatatagctta 40279422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #81
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 158 - 195
Target Start/End: Complemental strand, 43511148 - 43511111
Alignment:
Q  158 ttcacaagcttttttcagcttattttcataagttctcc 195  Q
    |||| ||||| |||||||||||||||||||||||||||    
T  43511148 ttcataagctgttttcagcttattttcataagttctcc 43511111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #82
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 66 - 110
Target Start/End: Complemental strand, 2790393 - 2790349
Alignment:
Q  66 ggcctgtttggattggcttatttgagctcatctattagcataagt 110  Q
    ||||||||||||||||||||||||| || ||||| ||| ||||||    
T  2790393 ggcctgtttggattggcttatttgaacttatctactagtataagt 2790349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #83
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 176 - 204
Target Start/End: Original strand, 21616652 - 21616680
Alignment:
Q  176 cttattttcataagttctccaaaatagct 204  Q
    |||||||||||||||||||||||||||||    
T  21616652 cttattttcataagttctccaaaatagct 21616680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #84
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 69 - 109
Target Start/End: Original strand, 30990357 - 30990397
Alignment:
Q  69 ctgtttggattggcttatttgagctcatctattagcataag 109  Q
    ||||||||||||||||||||||||| ||||| || ||||||    
T  30990357 ctgtttggattggcttatttgagcttatctactaacataag 30990397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #85
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 170 - 238
Target Start/End: Original strand, 33931589 - 33931657
Alignment:
Q  170 tttcagcttattttcataagttctccaaaatagcttacaaaaacagctaatatcatacacaaaaacaat 238  Q
    ||||||||||||| ||  | |||||||||||||||||  ||||||||| ||| | || |||||||||||    
T  33931589 tttcagcttatttccactatttctccaaaatagcttatgaaaacagcttatagcttatacaaaaacaat 33931657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #86
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 65 - 101
Target Start/End: Complemental strand, 40759316 - 40759280
Alignment:
Q  65 tggcctgtttggattggcttatttgagctcatctatt 101  Q
    |||||||||||||||| |||||||||||| |||||||    
T  40759316 tggcctgtttggattgccttatttgagcttatctatt 40759280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #87
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 169 - 217
Target Start/End: Original strand, 42621393 - 42621441
Alignment:
Q  169 ttttcagcttattttcataagttctccaaaatagcttacaaaaacagct 217  Q
    ||||||||||||||||| |||||||||| |||| ||||  |||||||||    
T  42621393 ttttcagcttattttcacaagttctccagaataacttatgaaaacagct 42621441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0221 (Bit Score: 61; Significance: 5e-26; HSPs: 1)
Name: scaffold0221
Description:

Target: scaffold0221; HSP #1
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 66 - 206
Target Start/End: Complemental strand, 22386 - 22246
Alignment:
Q  66 ggcctgtttggattggcttatttgagctcatctattagcataagtttagtgaaaccgtcatggaaaacttatgaaaacagcttctgacaattttcacaag 165  Q
    |||||||| ||||| |||||||| |||| ||||| | |||||||||| ||||  | ||   |||||||||||  ||||||||| |||||||||||  |||    
T  22386 ggcctgttaggatttgcttattttagcttatctaatggcataagttttgtgagcctgttccggaaaacttatagaaacagcttatgacaattttcgtaag 22287  T
Q  166 cttttttcagcttattttcataagttctccaaaatagctta 206  Q
    |||||||||||||||||||||||||| ||||| ||||||||    
T  22286 cttttttcagcttattttcataagttttccaacatagctta 22246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 60; Significance: 2e-25; HSPs: 43)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 66 - 206
Target Start/End: Original strand, 35070569 - 35070705
Alignment:
Q  66 ggcctgtttggattggcttatttgagctcatctattagcataagtttagtgaaaccgtcatggaaaacttatgaaaacagcttctgacaattttcacaag 165  Q
    |||||||||||||||||||||||||||| | ||| | ||| |||| | |||| || |     || |||||| ||||||||||| ||||||||||||||||    
T  35070569 ggcctgtttggattggcttatttgagcttacctactggcacaagtcttgtgagactga----gagaacttacgaaaacagcttatgacaattttcacaag 35070664  T
Q  166 cttttttcagcttattttcataagttctccaaaatagctta 206  Q
    |||||||  |||| |||||||||||||||||||||||||||    
T  35070665 cttttttgggcttgttttcataagttctccaaaatagctta 35070705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 137 - 240
Target Start/End: Original strand, 34430447 - 34430550
Alignment:
Q  137 tgaaaacagcttctgacaattttcacaagcttttttcagcttattttcataagttctccaaaatagcttacaaaaacagctaatatcatacacaaaaaca 236  Q
    |||||||||||| ||||| || ||| |||||||||||||||||||||||||| |||||||| ||||||||  |||||| || ||| |||| |||||||||    
T  34430447 tgaaaacagcttatgacatttatcataagcttttttcagcttattttcataacttctccaagatagcttatgaaaacaccttataacatatacaaaaaca 34430546  T
Q  237 attt 240  Q
    ||||    
T  34430547 attt 34430550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 66 - 188
Target Start/End: Complemental strand, 848143 - 848022
Alignment:
Q  66 ggcctgtttggattggcttatttgagctcatctattagcataagtttagtgaaaccgtcatggaa-aacttatgaaaacagcttctgacaattttcacaa 164  Q
    ||||||||||||||| |||||||||||| |||||| ||||||||||| |||| || ||  ||||| ||||||| ||||| |||| ||||| |||||  ||    
T  848143 ggcctgtttggattgccttatttgagcttatctat-agcataagttttgtgagactgtt-tggaagaacttataaaaactgcttatgacatttttcttaa 848046  T
Q  165 gcttttttcagcttattttcataa 188  Q
    ||||||||||||||||||||||||    
T  848045 gcttttttcagcttattttcataa 848022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 133 - 304
Target Start/End: Original strand, 9093538 - 9093709
Alignment:
Q  133 cttatgaaaacagcttctgacaattttcacaagcttttttcagcttattttcataagttctccaaaatagcttacaaaaacagctaatatcatacacaaa 232  Q
    |||||||||| ||||| ||||| | || | || || |||||||||||||||| ||||||||| || | ||||||  ||||||||| ||| | || || ||    
T  9093538 cttatgaaaatagcttatgacattgttaataacctgttttcagcttattttcttaagttctctaagacagcttatgaaaacagcttatagcttatacgaa 9093637  T
Q  233 aacaatttagcttcattttatctttctctataaagatagcttatgtataagcgcttatcataataagctgtt 304  Q
    ||||||||| ||| |||||||||||   |||| | |||||||||  ||||||||||||||| ||||| ||||    
T  9093638 aacaatttaactttattttatcttttgatatagaaatagcttatccataagcgcttatcatgataagttgtt 9093709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 131 - 257
Target Start/End: Complemental strand, 2735159 - 2735033
Alignment:
Q  131 aacttatgaaaacagcttctgacaattttcacaagcttttttcagcttattttcataagttctccaaaatagcttacaaaaacagctaatatcatacaca 230  Q
    ||||||||||||| |||| ||||| |||||| ||||| ||||| ||||||||||||||||| | ||| || |||||  ||||||||| |||   || |||    
T  2735159 aacttatgaaaacggcttatgacatttttcataagctgttttcggcttattttcataagttgttcaagattgcttatgaaaacagcttatagattataca 2735060  T
Q  231 aaaacaatttagcttcattttatcttt 257  Q
    |||| |||||| ||| |||||||||||    
T  2735059 aaaataatttaactttattttatcttt 2735033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 153 - 239
Target Start/End: Complemental strand, 6536683 - 6536597
Alignment:
Q  153 caattttcacaagcttttttcagcttattttcataagttctccaaaatagcttacaaaaacagctaatatcatacacaaaaacaatt 239  Q
    ||||||||| |||||||||||| ||||||||||||| |||||||| |||||||  ||||||| || ||| |||| ||||||||||||    
T  6536683 caattttcataagcttttttcaacttattttcataaattctccaatatagcttctaaaaacaacttatagcatatacaaaaacaatt 6536597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 131 - 279
Target Start/End: Complemental strand, 31623640 - 31623502
Alignment:
Q  131 aacttatgaaaacagcttctgacaattttcacaagcttttttcagcttattttcataagttctccaaaatagcttacaaaaacagctaatatcatacaca 230  Q
    ||||| |||||| ||||| ||||||||||||||||||||          ||||| |||||||||||| ||||  || |||||||||| ||| ||||||||    
T  31623640 aacttctgaaaatagcttatgacaattttcacaagcttt----------ttttcttaagttctccaatatagtgtataaaaacagcttatagcatacaca 31623551  T
Q  231 aaaacaatttagcttcattttatctttctctataaagatagcttatgta 279  Q
    | | ||||||| | ||||||||||||| |||||||| |||||| |||||    
T  31623550 agagcaatttaacgtcattttatctttttctataaaaatagctaatgta 31623502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 131 - 276
Target Start/End: Original strand, 20368161 - 20368305
Alignment:
Q  131 aacttatgaaaacagcttctgacaattttcacaagcttttttcagcttattttcataagttctccaaaatagcttacaaaaacagctaatatcatacaca 230  Q
    |||||||||||||| ||| ||||| | |||| |||||  ||||| |||||||||||||||||||||| | ||||||  |||||| || ||| |  | |||    
T  20368161 aacttatgaaaacaacttatgaca-tgttcataagctagtttcaacttattttcataagttctccaagaaagcttatgaaaacaacttataactcataca 20368259  T
Q  231 aaaacaatttagcttcattttatctttctctataaagatagcttat 276  Q
    ||||||||| | |||||||||| | || |||||| | |||||||||    
T  20368260 aaaacaattcaacttcattttagcattttctatataaatagcttat 20368305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 134 - 206
Target Start/End: Complemental strand, 13907672 - 13907600
Alignment:
Q  134 ttatgaaaacagcttctgacaattttcacaagcttttttcagcttattttcataagttctccaaaatagctta 206  Q
    ||||||||||||||||||||| | |||||||| | ||||||| |||||||||||| |||||||| || |||||    
T  13907672 ttatgaaaacagcttctgacattgttcacaagttattttcagtttattttcataatttctccaagatggctta 13907600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 131 - 202
Target Start/End: Original strand, 9912171 - 9912242
Alignment:
Q  131 aacttatgaaaacagcttctgacaattttcacaagcttttttcagcttattttcataagttctccaaaatag 202  Q
    ||||||||||| |||||| ||||| | |||| ||||| |||| |||||||||||||||||||||||| ||||    
T  9912171 aacttatgaaaccagcttatgacattgttcataagctgttttgagcttattttcataagttctccaatatag 9912242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 136 - 206
Target Start/End: Complemental strand, 12628425 - 12628357
Alignment:
Q  136 atgaaaacagcttctgacaattttcacaagcttttttcagcttattttcataagttctccaaaatagctta 206  Q
    |||||||||||||||||||  |||||  |||| |||||| |||| ||||||||||||||||||||||||||    
T  12628425 atgaaaacagcttctgaca--tttcattagctgttttcaacttactttcataagttctccaaaatagctta 12628357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 131 - 217
Target Start/End: Complemental strand, 31624179 - 31624094
Alignment:
Q  131 aacttatgaaaacagcttctgacaattttcacaagcttttttcagcttattttcataagttctccaaaatagcttacaaaaacagct 217  Q
    |||||||||||||||||| ||||| | |||| ||||| |||||| ||||||||||||| |||||||| ||||| ||  |||||||||    
T  31624179 aacttatgaaaacagcttatgaca-tgttcataagctgttttcaacttattttcataatttctccaagatagcctatgaaaacagct 31624094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 167 - 212
Target Start/End: Original strand, 160968 - 161013
Alignment:
Q  167 ttttttcagcttattttcataagttctccaaaatagcttacaaaaa 212  Q
    |||||||||||||||||||||||||||| || ||||||||||||||    
T  160968 ttttttcagcttattttcataagttctctaatatagcttacaaaaa 161013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 137 - 206
Target Start/End: Complemental strand, 9763644 - 9763575
Alignment:
Q  137 tgaaaacagcttctgacaattttcacaagcttttttcagcttattttcataagttctccaaaatagctta 206  Q
    |||||||||||| ||||| |||| | |||||||||||| |||| ||||||||||||| ||| ||||||||    
T  9763644 tgaaaacagcttatgacacttttgataagcttttttcaacttaatttcataagttctacaatatagctta 9763575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 69 - 226
Target Start/End: Complemental strand, 24982857 - 24982700
Alignment:
Q  69 ctgtttggattggcttatttgagctcatctattagcataagtttagtgaaaccgtcatggaaaacttatgaaaacagcttctgacaattttcacaagctt 168  Q
    |||||||||||| || ||| || || ||||| || ||||||||| |||| || ||  |||| ||| | ||| |||||||| ||||| |||| |  |||||    
T  24982857 ctgtttggattgactaattagatcttatctactaacataagttttgtgagactgttttggagaacatttgagaacagcttatgacatttttaatgagctt 24982758  T
Q  169 ttttcagcttattttcataagttctccaaaatagcttacaaaaacagctaatatcata 226  Q
    |||| ||||||   ||||||||||||||||||| ||||  ||||||||| ||| ||||    
T  24982757 tttttagcttaccctcataagttctccaaaataacttatgaaaacagcttatagcata 24982700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 163 - 212
Target Start/End: Original strand, 31624953 - 31625002
Alignment:
Q  163 aagcttttttcagcttattttcataagttctccaaaatagcttacaaaaa 212  Q
    ||||| ||||||||||||||||||||||||||||| ||||||||| ||||    
T  31624953 aagctgttttcagcttattttcataagttctccaatatagcttacgaaaa 31625002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 203 - 299
Target Start/End: Complemental strand, 4163193 - 4163097
Alignment:
Q  203 cttacaaaaacagctaatatcatacacaaaaacaatttagcttcattttatctttctctataaagatagcttatgtataagcgcttatcataataag 299  Q
    |||| ||||| |||| ||| |||| ||| |||||||||| ||| ||||||||| | |||||||| ||||||||||| |||| | ||||||| |||||    
T  4163193 cttataaaaatagcttataacatatacacaaacaatttaactttattttatctatttctataaaaatagcttatgtgtaagtgtttatcatgataag 4163097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 203 - 299
Target Start/End: Complemental strand, 4224814 - 4224718
Alignment:
Q  203 cttacaaaaacagctaatatcatacacaaaaacaatttagcttcattttatctttctctataaagatagcttatgtataagcgcttatcataataag 299  Q
    |||| ||||| |||| ||| |||| ||| |||||||||| ||| ||||||||| | |||||||| ||||||||||| |||| | ||||||| |||||    
T  4224814 cttataaaaatagcttataacatatacacaaacaatttaactttattttatctatttctataaaaatagcttatgtgtaagtgtttatcatgataag 4224718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 177 - 241
Target Start/End: Complemental strand, 8201277 - 8201213
Alignment:
Q  177 ttattttcataagttctccaaaatagcttacaaaaacagctaatatcatacacaaaaacaattta 241  Q
    ||||||||||||||||||||| ||| |||| ||||||| || |||  ||||||||||||||||||    
T  8201277 ttattttcataagttctccaacataacttataaaaacaacttataggatacacaaaaacaattta 8201213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 163 - 239
Target Start/End: Original strand, 35070479 - 35070555
Alignment:
Q  163 aagcttttttcagcttattttcataagttctccaaaatagcttacaaaaacagctaatatcatacacaaaaacaatt 239  Q
    ||||| |||||| |||||||||||||| |||| || ||||||||||||||||||| ||| | |  ||||||||||||    
T  35070479 aagctgttttcaacttattttcataagctctcaaacatagcttacaaaaacagcttataacttgtacaaaaacaatt 35070555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 169 - 283
Target Start/End: Original strand, 837234 - 837348
Alignment:
Q  169 ttttcagcttattttcataagttctccaaaatagcttacaaaaacagctaatatcatacacaaaaacaatttagcttcattttatctttctctataaaga 268  Q
    ||||||||||||||||||||||||||||| |||||| |  |||||  || ||| | ||||| ||||||||||| ||   ||||||||||  |  |||| |    
T  837234 ttttcagcttattttcataagttctccaagatagctaatgaaaactacttatagcttacaccaaaacaatttaactctgttttatcttttacagtaaaaa 837333  T
Q  269 tagcttatgtataag 283  Q
    |||||||| ||||||    
T  837334 tagcttatatataag 837348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 67 - 112
Target Start/End: Complemental strand, 103584 - 103539
Alignment:
Q  67 gcctgtttggattggcttatttgagctcatctattagcataagttt 112  Q
    |||||||||||||| |||||||||||| || |||||||||||||||    
T  103584 gcctgtttggattgacttatttgagcttatatattagcataagttt 103539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 169 - 206
Target Start/End: Original strand, 835267 - 835304
Alignment:
Q  169 ttttcagcttattttcataagttctccaaaatagctta 206  Q
    ||||||||||||||||||||||||||||| ||||||||    
T  835267 ttttcagcttattttcataagttctccaagatagctta 835304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 180 - 257
Target Start/End: Original strand, 3785729 - 3785806
Alignment:
Q  180 ttttcataagttctccaaaatagcttacaaaaacagctaatatcatacacaaaaacaatttagcttcattttatcttt 257  Q
    |||| ||||| |||||| |||||||||||||||||||| ||| | || || |||||| |||| ||| |||||||||||    
T  3785729 tttttataagctctccagaatagcttacaaaaacagcttatagcttatacgaaaacagtttaactttattttatcttt 3785806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 68 - 193
Target Start/End: Complemental strand, 34430867 - 34430743
Alignment:
Q  68 cctgtttggattggcttatttgagctcatctattagcataagtttagtgaaaccgtcatggaaaacttatgaaaacagcttctgacaattttcacaagct 167  Q
    |||||||||||||||||||||||||| ||| | | | |||||||| || | |  ||   ||| || ||||||||||| ||| |||||||||||| | |||    
T  34430867 cctgtttggattggcttatttgagcttatcaact-gaataagttttgtaagattgtttgggataatttatgaaaacaacttatgacaattttcatatgct 34430769  T
Q  168 tttttcagcttattttcataagttct 193  Q
    ||||  | ||||||||||||||||||    
T  34430768 ttttcaaacttattttcataagttct 34430743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 176 - 300
Target Start/End: Complemental strand, 33117586 - 33117463
Alignment:
Q  176 cttattttcataagttctccaaaatagcttacaaaaacagctaatatcatacacaaaaacaatttagcttcattttatctttctctataaagatagctta 275  Q
    |||||||||||||||| ||||| ||||||    ||| ||||| ||| |||| | |||||||||||| ||| ||||||| |||  |||||||  |||||||    
T  33117586 cttattttcataagttatccaagatagctatttaaatcagcttataacatata-aaaaacaatttaacttaattttatattttgctataaaagtagctta 33117488  T
Q  276 tgtataagcgcttatcataataagc 300  Q
    || ||||| |||||| || ||||||    
T  33117487 tgcataagtgcttattatgataagc 33117463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 69 - 112
Target Start/End: Original strand, 835179 - 835222
Alignment:
Q  69 ctgtttggattggcttatttgagctcatctattagcataagttt 112  Q
    |||||||||||| |||||||||||| ||||| ||||||||||||    
T  835179 ctgtttggattgccttatttgagcttatctactagcataagttt 835222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 134 - 193
Target Start/End: Complemental strand, 18076290 - 18076231
Alignment:
Q  134 ttatgaaaacagcttctgacaattttcacaagcttttttcagcttattttcataagttct 193  Q
    |||||||| |||||| ||||||||||||  |||| |||||| ||||| ||||||||||||    
T  18076290 ttatgaaaccagcttatgacaattttcatgagctgttttcaacttatattcataagttct 18076231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 163 - 218
Target Start/End: Complemental strand, 30536568 - 30536513
Alignment:
Q  163 aagcttttttcagcttattttcataagttctccaaaatagcttacaaaaacagcta 218  Q
    |||||||||||| ||||||||||||| |||||||| |||||| | |||| ||||||    
T  30536568 aagcttttttcaacttattttcataaattctccaatatagctaataaaagcagcta 30536513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 131 - 206
Target Start/End: Complemental strand, 31813251 - 31813176
Alignment:
Q  131 aacttatgaaaacagcttctgacaattttcacaagcttttttcagcttattttcataagttctccaaaatagctta 206  Q
    ||||||||||||  |||| ||| | | |||| ||||  ||||||||||||||||||| ||||||||| ||||||||    
T  31813251 aacttatgaaaattgcttatgagattgttcataagccgttttcagcttattttcatatgttctccaagatagctta 31813176  T

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Target: chr6; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 167 - 197
Target Start/End: Original strand, 835040 - 835070
Alignment:
Q  167 ttttttcagcttattttcataagttctccaa 197  Q
    |||||||||||||||||||||||||||||||    
T  835040 ttttttcagcttattttcataagttctccaa 835070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 70 - 112
Target Start/End: Complemental strand, 4163304 - 4163262
Alignment:
Q  70 tgtttggattggcttatttgagctcatctattagcataagttt 112  Q
    |||||||||||||||||||||||| ||||| | ||||||||||    
T  4163304 tgtttggattggcttatttgagcttatctactggcataagttt 4163262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 70 - 112
Target Start/End: Complemental strand, 4224925 - 4224883
Alignment:
Q  70 tgtttggattggcttatttgagctcatctattagcataagttt 112  Q
    |||||||||||||||||||||||| ||||| | ||||||||||    
T  4224925 tgtttggattggcttatttgagcttatctactggcataagttt 4224883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 171 - 241
Target Start/End: Complemental strand, 6538562 - 6538492
Alignment:
Q  171 ttcagcttattttcataagttctccaaaatagcttacaaaaacagctaatatcatacacaaaaacaattta 241  Q
    |||| |||||||| ||||||||||||| ||||| || ||||||| || ||| |||| ||| ||||||||||    
T  6538562 ttcaacttattttaataagttctccaatatagcctataaaaacaacttatagcatatacataaacaattta 6538492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 150 - 203
Target Start/End: Complemental strand, 32014332 - 32014281
Alignment:
Q  150 tgacaattttcacaagcttttttcagcttattttcataagttctccaaaatagc 203  Q
    ||||||||||||||| |||||  |||||||||||||||| |||||||| |||||    
T  32014332 tgacaattttcacaatctttt--cagcttattttcataacttctccaatatagc 32014281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 62 - 91
Target Start/End: Complemental strand, 2457100 - 2457071
Alignment:
Q  62 atatggcctgtttggattggcttatttgag 91  Q
    ||||||||||||||||||||||||||||||    
T  2457100 atatggcctgtttggattggcttatttgag 2457071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 171 - 279
Target Start/End: Original strand, 6909892 - 6910001
Alignment:
Q  171 ttcagcttattttcataagttctccaaaatagcttacaaaaacagctaatatcatacacaaaaacaatttagcttca-ttttatctttctctataaagat 269  Q
    ||||||||| |||||||| |||||||| |||  |||  |||||| || ||| |||| |||||||||||||| ||| | |||| |||||  ||||| | ||    
T  6909892 ttcagcttaatttcataaattctccaagatatgttatgaaaacaacttatagcatatacaaaaacaatttaactttatttttttcttttcctatagaaat 6909991  T
Q  270 agcttatgta 279  Q
    ||||||||||    
T  6909992 agcttatgta 6910001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 168 - 204
Target Start/End: Complemental strand, 264416 - 264380
Alignment:
Q  168 tttttcagcttattttcataagttctccaaaatagct 204  Q
    |||||||| ||||||||||||||||||||| ||||||    
T  264416 tttttcagtttattttcataagttctccaagatagct 264380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 169 - 241
Target Start/End: Original strand, 836559 - 836631
Alignment:
Q  169 ttttcagcttattttcataagttctccaaaatagcttacaaaaacagctaatatcatacacaaaaacaattta 241  Q
    ||||||||| |||||||||||||| |||| ||||||||  || |||||||||| |  | || |||||||||||    
T  836559 ttttcagctcattttcataagttccccaagatagcttatgaacacagctaatagctcataccaaaacaattta 836631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 158 - 206
Target Start/End: Complemental strand, 4420706 - 4420658
Alignment:
Q  158 ttcacaagcttttttcagcttattttcataagttctccaaaatagctta 206  Q
    |||| ||||| |||||||||||||| |||||| ||||||| ||||||||    
T  4420706 ttcataagctgttttcagcttatttccataagctctccaagatagctta 4420658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 131 - 191
Target Start/End: Original strand, 19411529 - 19411589
Alignment:
Q  131 aacttatgaaaacagcttctgacaattttcacaagcttttttcagcttattttcataagtt 191  Q
    ||||| || ||||||||| ||||| || ||| ||||||||||| |||||||||| ||||||    
T  19411529 aacttttgtaaacagcttatgacagttctcataagcttttttcggcttattttcgtaagtt 19411589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 66 - 110
Target Start/End: Original strand, 32205928 - 32205972
Alignment:
Q  66 ggcctgtttggattggcttatttgagctcatctattagcataagt 110  Q
    ||||||||||||||| ||||||||| || ||||| ||||||||||    
T  32205928 ggcctgtttggattgacttatttgaccttatctactagcataagt 32205972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 135 - 199
Target Start/End: Original strand, 34910393 - 34910457
Alignment:
Q  135 tatgaaaacagcttctgacaattttcacaagcttttttcagcttattttcataagttctccaaaa 199  Q
    |||||||||||||| ||||| | ||||  || | ||||| ||||| |||||||||||||||||||    
T  34910393 tatgaaaacagcttatgacattgttcatgagttgttttccgcttactttcataagttctccaaaa 34910457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0050 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 1)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 128 - 206
Target Start/End: Complemental strand, 58835 - 58757
Alignment:
Q  128 gaaaacttatgaaaacagcttctgacaattttcacaagcttttttcagcttattttcataagttctccaaaatagctta 206  Q
    ||||| |||||||| ||| || |||||||||||| |||||||||||| |||| ||||||||||||| ||| ||||||||    
T  58835 gaaaatttatgaaagcagtttatgacaattttcataagcttttttcaacttaatttcataagttcttcaacatagctta 58757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 177 - 293
Target Start/End: Original strand, 21311 - 21420
Alignment:
Q  177 ttattttcataagttctccaaaatagcttacaaaaacagctaatatcatacacaaaaacaatttagcttcattttatctttctctataaagatagcttat 276  Q
    |||||||||||| |||||||| ||||||||  ||||||||| |||       | ||||||||||| ||| |||||||||||  ||||||| |||||||||    
T  21311 ttattttcataatttctccaatatagcttatgaaaacagcttata-------cgaaaacaatttaactttattttatcttttcctataaaaatagcttat 21403  T
Q  277 gtataagcgcttatcat 293  Q
      ||||| |||||||||    
T  21404 acataagtgcttatcat 21420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0103 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0103
Description:

Target: scaffold0103; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 154 - 193
Target Start/End: Complemental strand, 52044 - 52005
Alignment:
Q  154 aattttcacaagcttttttcagcttattttcataagttct 193  Q
    |||||||| |||||||||||| ||||||||||||||||||    
T  52044 aattttcaaaagcttttttcaacttattttcataagttct 52005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0699 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0699
Description:

Target: scaffold0699; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 126 - 194
Target Start/End: Complemental strand, 6978 - 6909
Alignment:
Q  126 tggaaaacttatgaaaacagcttctgacaattttcacaagctttttt-cagcttattttcataagttctc 194  Q
    |||| ||||| |||||||||||  || ||||| |||||||||||||| ||||| ||||||| ||||||||    
T  6978 tggagaacttgtgaaaacagctcatggcaattatcacaagcttttttccagctgattttcacaagttctc 6909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 66 - 99
Target Start/End: Original strand, 159888 - 159921
Alignment:
Q  66 ggcctgtttggattggcttatttgagctcatcta 99  Q
    |||||||||||||||||||||||||||| |||||    
T  159888 ggcctgtttggattggcttatttgagcttatcta 159921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0147 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0147
Description:

Target: scaffold0147; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 169 - 213
Target Start/End: Complemental strand, 23683 - 23639
Alignment:
Q  169 ttttcagcttattttcataagttctccaaaatagcttacaaaaac 213  Q
    |||||| |||||||||| ||||||||||| |||||||| ||||||    
T  23683 ttttcaacttattttcacaagttctccaatatagcttataaaaac 23639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 169 - 221
Target Start/End: Original strand, 178343 - 178395
Alignment:
Q  169 ttttcagcttattttcataagttctccaaaatagcttacaaaaacagctaata 221  Q
    |||||||||||||||||||||||||| || || ||||   |||||||||||||    
T  178343 ttttcagcttattttcataagttctcaaagatggcttgtgaaaacagctaata 178395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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