View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF3301_high_21 (Length: 244)

Name: NF3301_high_21
Description: NF3301
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF3301_high_21
NF3301_high_21
[»] chr6 (55 HSPs)
chr6 (1-182)||(30728641-30728822)
chr6 (1-157)||(3631781-3631937)
chr6 (1-150)||(9020242-9020394)
chr6 (13-157)||(3394695-3394840)
chr6 (7-147)||(15346668-15346806)
chr6 (4-158)||(24338291-24338443)
chr6 (1-148)||(3629717-3629863)
chr6 (1-148)||(11982878-11983027)
chr6 (7-148)||(15367353-15367492)
chr6 (1-129)||(1069588-1069716)
chr6 (1-150)||(3233571-3233723)
chr6 (26-148)||(25480219-25480340)
chr6 (60-148)||(29754555-29754642)
chr6 (60-138)||(4816087-4816164)
chr6 (1-150)||(13057511-13057655)
chr6 (34-134)||(14507037-14507134)
chr6 (60-157)||(26068232-26068328)
chr6 (1-148)||(32280313-32280457)
chr6 (60-148)||(26065967-26066054)
chr6 (1-148)||(22490931-22491073)
chr6 (1-159)||(15540985-15541138)
chr6 (69-150)||(18322482-18322562)
chr6 (69-157)||(26932400-26932487)
chr6 (34-137)||(28241179-28241279)
chr6 (34-155)||(2628726-2628844)
chr6 (34-155)||(14458606-14458725)
chr6 (6-138)||(15530022-15530156)
chr6 (34-139)||(26065335-26065440)
chr6 (34-139)||(26085304-26085409)
chr6 (80-157)||(8717192-8717268)
chr6 (1-148)||(14466640-14466785)
chr6 (36-136)||(19704422-19704521)
chr6 (34-156)||(1230088-1230207)
chr6 (60-150)||(30967581-30967669)
chr6 (183-232)||(30727330-30727379)
chr6 (34-137)||(33309212-33309313)
chr6 (34-137)||(33311481-33311582)
chr6 (80-148)||(12195360-12195427)
chr6 (4-59)||(12161498-12161553)
chr6 (80-138)||(5273072-5273129)
chr6 (69-157)||(17012417-17012505)
chr6 (36-138)||(20915213-20915312)
chr6 (4-72)||(12186000-12186066)
chr6 (95-150)||(13040173-13040228)
chr6 (7-137)||(19696763-19696887)
chr6 (4-37)||(10584315-10584348)
chr6 (109-148)||(22857849-22857888)
chr6 (75-118)||(25477614-25477657)
chr6 (11-62)||(26945471-26945521)
chr6 (81-155)||(30034446-30034517)
chr6 (54-137)||(6610378-6610457)
chr6 (108-148)||(28037582-28037623)
chr6 (108-148)||(7294214-7294254)
chr6 (97-137)||(10584355-10584395)
chr6 (101-148)||(24501307-24501352)
[»] chr1 (79 HSPs)
chr1 (1-148)||(2949085-2949232)
chr1 (1-149)||(11457327-11457475)
chr1 (1-148)||(25251127-25251274)
chr1 (1-148)||(50248423-50248570)
chr1 (9-148)||(13215373-13215512)
chr1 (1-155)||(18839869-18840023)
chr1 (1-157)||(31424859-31425015)
chr1 (1-155)||(14097814-14097969)
chr1 (1-148)||(17319168-17319315)
chr1 (1-150)||(4131225-4131375)
chr1 (1-150)||(18307390-18307539)
chr1 (1-155)||(31490193-31490346)
chr1 (24-157)||(50078632-50078766)
chr1 (1-155)||(6995539-6995700)
chr1 (1-150)||(47906551-47906700)
chr1 (1-148)||(9240940-9241085)
chr1 (1-139)||(27336799-27336940)
chr1 (1-148)||(25248404-25248551)
chr1 (1-150)||(39462800-39462952)
chr1 (1-138)||(12302367-12302505)
chr1 (1-157)||(27338970-27339131)
chr1 (12-148)||(3579437-3579572)
chr1 (1-157)||(16429239-16429390)
chr1 (1-157)||(28206909-28207068)
chr1 (13-140)||(47451922-47452051)
chr1 (1-150)||(23816167-23816319)
chr1 (1-150)||(31422710-31422860)
chr1 (4-148)||(50307395-50307542)
chr1 (1-147)||(15823827-15823977)
chr1 (1-148)||(41647201-41647349)
chr1 (36-148)||(39932398-39932508)
chr1 (35-148)||(30780361-30780476)
chr1 (11-130)||(17324365-17324484)
chr1 (1-132)||(38925350-38925481)
chr1 (1-148)||(17324484-17324636)
chr1 (34-150)||(13762157-13762271)
chr1 (34-155)||(51750360-51750477)
chr1 (1-140)||(17185993-17186127)
chr1 (60-148)||(24326008-24326095)
chr1 (61-157)||(51757881-51757976)
chr1 (34-148)||(9459283-9459394)
chr1 (34-148)||(9463110-9463221)
chr1 (1-148)||(40134226-40134372)
chr1 (34-156)||(46431546-46431665)
chr1 (1-157)||(28998091-28998253)
chr1 (1-157)||(29003807-29003969)
chr1 (34-150)||(13447121-13447233)
chr1 (34-137)||(15294694-15294794)
chr1 (60-148)||(23786185-23786272)
chr1 (14-137)||(25860270-25860392)
chr1 (34-155)||(28842815-28842932)
chr1 (60-150)||(31735369-31735458)
chr1 (34-157)||(16226489-16226610)
chr1 (1-140)||(25128154-25128293)
chr1 (1-97)||(50076577-50076672)
chr1 (34-150)||(10399673-10399788)
chr1 (28-148)||(15916697-15916815)
chr1 (34-157)||(2617838-2617958)
chr1 (34-148)||(16231884-16231996)
chr1 (34-155)||(13358894-13359012)
chr1 (1-113)||(16428935-16429043)
chr1 (34-157)||(20291777-20291897)
chr1 (34-157)||(47177683-47177804)
chr1 (26-137)||(18800439-18800548)
chr1 (54-137)||(2510202-2510284)
chr1 (4-140)||(6114967-6115099)
chr1 (26-138)||(14183470-14183579)
chr1 (1-146)||(16432677-16432813)
chr1 (34-148)||(47180034-47180146)
chr1 (61-137)||(51752715-51752789)
chr1 (1-71)||(6756809-6756877)
chr1 (34-150)||(20302762-20302875)
chr1 (34-119)||(28841000-28841083)
chr1 (34-157)||(8348902-8349020)
chr1 (26-137)||(30790266-30790378)
chr1 (77-150)||(13125314-13125386)
chr1 (6-97)||(15669300-15669387)
chr1 (7-140)||(8347140-8347266)
chr1 (7-61)||(26520061-26520114)
[»] chr4 (92 HSPs)
chr4 (1-150)||(36919433-36919582)
chr4 (1-157)||(36921335-36921491)
chr4 (1-148)||(2891627-2891774)
chr4 (1-150)||(22800709-22800860)
chr4 (1-157)||(22802574-22802732)
chr4 (26-155)||(49088916-49089045)
chr4 (22-157)||(14789270-14789405)
chr4 (1-150)||(38928028-38928175)
chr4 (1-137)||(47563096-47563230)
chr4 (22-150)||(14787278-14787406)
chr4 (1-155)||(40091258-40091413)
chr4 (1-138)||(6133172-6133309)
chr4 (1-148)||(24446508-24446652)
chr4 (1-148)||(27499377-27499530)
chr4 (1-157)||(16453645-16453799)
chr4 (1-150)||(33415338-33415486)
chr4 (26-150)||(37312928-37313052)
chr4 (2-132)||(12395712-12395842)
chr4 (2-132)||(12400674-12400804)
chr4 (23-148)||(5101273-5101398)
chr4 (4-132)||(13547492-13547621)
chr4 (34-150)||(37089216-37089330)
chr4 (1-138)||(52942346-52942486)
chr4 (66-148)||(6765247-6765329)
chr4 (26-148)||(16455586-16455708)
chr4 (1-150)||(17662096-17662243)
chr4 (1-150)||(40637409-40637562)
chr4 (26-148)||(47275084-47275206)
chr4 (34-158)||(53405508-53405630)
chr4 (1-150)||(24889131-24889282)
chr4 (1-97)||(24879325-24879423)
chr4 (4-157)||(36378631-36378780)
chr4 (44-139)||(3824464-3824560)
chr4 (34-157)||(47210634-47210754)
chr4 (34-148)||(51015620-51015732)
chr4 (60-139)||(22046542-22046620)
chr4 (34-159)||(5635313-5635434)
chr4 (34-148)||(48486689-48486803)
chr4 (1-158)||(4215641-4215796)
chr4 (36-156)||(8631258-8631374)
chr4 (26-161)||(18409185-18409319)
chr4 (1-137)||(36380685-36380818)
chr4 (34-137)||(2484731-2484831)
chr4 (63-155)||(24348603-24348693)
chr4 (36-150)||(31849444-31849554)
chr4 (10-140)||(41997835-41997961)
chr4 (34-155)||(47868776-47868895)
chr4 (36-137)||(9176331-9176429)
chr4 (34-139)||(22044247-22044349)
chr4 (34-150)||(9148610-9148723)
chr4 (60-137)||(11006111-11006187)
chr4 (60-137)||(11008425-11008501)
chr4 (34-145)||(11435329-11435438)
chr4 (26-150)||(56030820-56030941)
chr4 (5-155)||(3937125-3937268)
chr4 (34-149)||(14633693-14633805)
chr4 (40-135)||(22134476-22134568)
chr4 (54-132)||(38270016-38270091)
chr4 (34-148)||(16931637-16931748)
chr4 (36-137)||(5198781-5198879)
chr4 (40-135)||(22132248-22132341)
chr4 (62-150)||(7941724-7941810)
chr4 (36-155)||(9173986-9174101)
chr4 (34-148)||(11437737-11437849)
chr4 (7-133)||(18534703-18534824)
chr4 (1-97)||(24880787-24880887)
chr4 (34-137)||(38409579-38409679)
chr4 (80-155)||(22780211-22780285)
chr4 (60-155)||(44599679-44599772)
chr4 (60-138)||(18847552-18847628)
chr4 (77-150)||(19096293-19096366)
chr4 (80-157)||(22782574-22782650)
chr4 (7-138)||(38890090-38890217)
chr4 (69-138)||(18709020-18709088)
chr4 (34-137)||(5664605-5664706)
chr4 (26-137)||(12102442-12102550)
chr4 (34-135)||(26085836-26085935)
chr4 (77-155)||(619297-619375)
chr4 (10-133)||(18537345-18537463)
chr4 (7-137)||(8756119-8756243)
chr4 (74-157)||(10113273-10113354)
chr4 (7-137)||(15032410-15032539)
chr4 (66-137)||(19323090-19323161)
chr4 (77-157)||(16933985-16934062)
chr4 (1-62)||(30136885-30136945)
chr4 (7-148)||(9864053-9864190)
chr4 (95-161)||(18311208-18311275)
chr4 (7-69)||(22295506-22295565)
chr4 (3-38)||(38270087-38270122)
chr4 (7-97)||(28454024-28454113)
chr4 (74-145)||(10114720-10114789)
chr4 (108-148)||(25613816-25613856)
[»] chr8 (48 HSPs)
chr8 (1-148)||(33541261-33541408)
chr8 (1-138)||(14808098-14808235)
chr8 (1-137)||(30480365-30480501)
chr8 (4-150)||(15073051-15073198)
chr8 (1-157)||(14419032-14419188)
chr8 (1-132)||(37214131-37214262)
chr8 (1-148)||(35872307-35872451)
chr8 (1-157)||(41382999-41383157)
chr8 (1-157)||(15068318-15068475)
chr8 (1-148)||(14477588-14477734)
chr8 (1-148)||(25952858-25953004)
chr8 (5-147)||(13858341-13858479)
chr8 (26-137)||(36865901-36866012)
chr8 (1-138)||(28251427-28251565)
chr8 (1-148)||(15185570-15185712)
chr8 (60-157)||(27827386-27827482)
chr8 (1-155)||(41385081-41385234)
chr8 (34-148)||(3874370-3874481)
chr8 (34-156)||(28283060-28283179)
chr8 (60-150)||(27829697-27829786)
chr8 (34-155)||(43530492-43530610)
chr8 (34-150)||(3883440-3883553)
chr8 (35-157)||(18811085-18811205)
chr8 (24-148)||(27911439-27911561)
chr8 (24-148)||(27957858-27957980)
chr8 (60-135)||(44721244-44721318)
chr8 (60-150)||(15809619-15809707)
chr8 (1-148)||(15956295-15956437)
chr8 (35-150)||(18813259-18813372)
chr8 (7-148)||(21482653-21482792)
chr8 (66-147)||(27106754-27106835)
chr8 (1-88)||(181816-181901)
chr8 (7-158)||(2467975-2468122)
chr8 (34-156)||(22684489-22684611)
chr8 (34-137)||(4424395-4424496)
chr8 (34-138)||(43082350-43082451)
chr8 (1-135)||(1225504-1225626)
chr8 (60-155)||(32339710-32339804)
chr8 (7-157)||(21480845-21480993)
chr8 (34-138)||(5372042-5372147)
chr8 (80-148)||(24873045-24873112)
chr8 (26-137)||(31162574-31162683)
chr8 (69-138)||(43080012-43080080)
chr8 (34-137)||(609112-609214)
chr8 (90-148)||(183246-183304)
chr8 (66-137)||(3005502-3005572)
chr8 (108-148)||(16833978-16834018)
chr8 (108-148)||(17847956-17847996)
[»] chr5 (70 HSPs)
chr5 (1-138)||(2724174-2724311)
chr5 (1-137)||(17818352-17818490)
chr5 (9-148)||(41585586-41585725)
chr5 (1-157)||(26098126-26098286)
chr5 (1-148)||(1189460-1189605)
chr5 (1-155)||(31465832-31465987)
chr5 (10-137)||(37705644-37705771)
chr5 (2-150)||(6756774-6756923)
chr5 (1-146)||(10474176-10474321)
chr5 (24-140)||(40221833-40221949)
chr5 (1-150)||(39854764-39854917)
chr5 (1-157)||(18511053-18511210)
chr5 (1-156)||(36402168-36402326)
chr5 (1-148)||(16092051-16092197)
chr5 (1-150)||(21948307-21948464)
chr5 (4-155)||(25904387-25904537)
chr5 (1-116)||(26098012-26098127)
chr5 (1-148)||(21289042-21289187)
chr5 (32-148)||(34530565-34530681)
chr5 (1-148)||(2954697-2954843)
chr5 (1-132)||(20043271-20043402)
chr5 (1-148)||(24127137-24127285)
chr5 (1-148)||(36208857-36209001)
chr5 (1-150)||(658208-658354)
chr5 (14-139)||(12555773-12555898)
chr5 (1-146)||(2818186-2818333)
chr5 (26-129)||(20045292-20045395)
chr5 (1-156)||(6747585-6747745)
chr5 (26-147)||(18596951-18597072)
chr5 (34-148)||(18469330-18469442)
chr5 (34-148)||(27912857-27912969)
chr5 (1-157)||(6745349-6745510)
chr5 (1-148)||(16776438-16776588)
chr5 (34-157)||(18467005-18467126)
chr5 (1-115)||(18509201-18509316)
chr5 (1-157)||(20505684-20505841)
chr5 (34-150)||(38959976-38960089)
chr5 (34-156)||(39798351-39798470)
chr5 (34-157)||(25804345-25804466)
chr5 (34-150)||(38882409-38882521)
chr5 (34-157)||(27910754-27910875)
chr5 (41-148)||(31179219-31179323)
chr5 (34-156)||(34476892-34477011)
chr5 (34-148)||(4236949-4237059)
chr5 (1-131)||(17073165-17073298)
chr5 (34-148)||(25921321-25921431)
chr5 (60-150)||(21684298-21684386)
chr5 (34-138)||(2175222-2175323)
chr5 (31-155)||(4410340-4410459)
chr5 (4-137)||(696162-696292)
chr5 (34-148)||(3372983-3373095)
chr5 (34-137)||(10587136-10587236)
chr5 (60-137)||(34479275-34479352)
chr5 (1-138)||(20054118-20054251)
chr5 (34-137)||(10528955-10529056)
chr5 (34-137)||(10750020-10750121)
chr5 (34-137)||(10757496-10757597)
chr5 (34-135)||(31543055-31543153)
chr5 (80-157)||(15356687-15356763)
chr5 (69-138)||(15552600-15552668)
chr5 (80-157)||(23665411-23665487)
chr5 (80-157)||(23793100-23793176)
chr5 (77-157)||(31472455-31472536)
chr5 (23-88)||(39397916-39397981)
chr5 (80-148)||(15354420-15354487)
chr5 (80-148)||(23741703-23741770)
chr5 (7-138)||(2144437-2144561)
chr5 (7-158)||(15143754-15143900)
chr5 (26-137)||(6661053-6661161)
chr5 (34-135)||(31545404-31545502)
[»] chr3 (85 HSPs)
chr3 (1-157)||(3314946-3315103)
chr3 (1-157)||(43423305-43423459)
chr3 (1-148)||(32263887-32264034)
chr3 (1-137)||(1626543-1626679)
chr3 (1-156)||(43421258-43421411)
chr3 (1-137)||(27635515-27635654)
chr3 (1-157)||(53917503-53917660)
chr3 (1-150)||(1313670-1313818)
chr3 (1-150)||(18096744-18096896)
chr3 (1-150)||(36012088-36012239)
chr3 (1-150)||(53915342-53915492)
chr3 (1-140)||(12267833-12267971)
chr3 (1-148)||(15781140-15781287)
chr3 (7-138)||(28181271-28181401)
chr3 (1-139)||(4666775-4666913)
chr3 (1-157)||(18099007-18099166)
chr3 (1-137)||(53468313-53468449)
chr3 (5-148)||(5926615-5926757)
chr3 (1-157)||(28101845-28101998)
chr3 (1-138)||(32219346-32219486)
chr3 (1-147)||(45883201-45883350)
chr3 (1-138)||(880312-880447)
chr3 (1-156)||(6232061-6232210)
chr3 (4-148)||(18162927-18163074)
chr3 (1-137)||(51674626-51674762)
chr3 (7-140)||(47148759-47148885)
chr3 (1-148)||(3307021-3307170)
chr3 (1-150)||(880088-880236)
chr3 (1-138)||(6484621-6484757)
chr3 (1-148)||(24979969-24980120)
chr3 (1-130)||(39715726-39715858)
chr3 (1-125)||(51943631-51943758)
chr3 (1-159)||(41849320-41849475)
chr3 (1-150)||(4308126-4308277)
chr3 (6-157)||(43226349-43226498)
chr3 (34-155)||(1321780-1321898)
chr3 (1-157)||(42990565-42990720)
chr3 (1-145)||(43228552-43228696)
chr3 (1-150)||(47701524-47701667)
chr3 (1-139)||(25688015-25688156)
chr3 (1-148)||(27101028-27101177)
chr3 (1-148)||(54691423-54691570)
chr3 (1-150)||(9604451-9604603)
chr3 (34-150)||(5191952-5192064)
chr3 (4-132)||(53591449-53591575)
chr3 (34-137)||(10955883-10955983)
chr3 (34-157)||(25533726-25533845)
chr3 (1-157)||(23633714-23633865)
chr3 (34-139)||(5886498-5886601)
chr3 (34-139)||(5899971-5900074)
chr3 (34-157)||(11168402-11168522)
chr3 (34-137)||(10084245-10084345)
chr3 (34-137)||(10191168-10191268)
chr3 (1-127)||(48361538-48361667)
chr3 (34-157)||(6065630-6065751)
chr3 (60-137)||(53893910-53893986)
chr3 (34-148)||(747059-747171)
chr3 (34-137)||(10958179-10958279)
chr3 (26-148)||(28761293-28761412)
chr3 (34-148)||(50494300-50494411)
chr3 (60-138)||(25389232-25389309)
chr3 (34-139)||(3859811-3859914)
chr3 (34-137)||(456209-456309)
chr3 (34-137)||(458586-458686)
chr3 (1-148)||(17795520-17795663)
chr3 (1-148)||(19103960-19104103)
chr3 (7-148)||(31151612-31151748)
chr3 (34-136)||(38890341-38890441)
chr3 (34-157)||(10621363-10621485)
chr3 (34-155)||(11170671-11170789)
chr3 (34-148)||(38210672-38210783)
chr3 (66-137)||(42992712-42992783)
chr3 (8-137)||(561640-561764)
chr3 (1-98)||(8183035-8183130)
chr3 (77-148)||(28412876-28412946)
chr3 (80-150)||(5522470-5522538)
chr3 (60-156)||(7606441-7606536)
chr3 (36-116)||(26720850-26720928)
chr3 (80-156)||(6063281-6063356)
chr3 (36-150)||(22114147-22114258)
chr3 (34-158)||(51726843-51726963)
chr3 (34-150)||(4103740-4103852)
chr3 (108-148)||(29897533-29897574)
chr3 (84-137)||(36957651-36957703)
chr3 (77-148)||(36871155-36871225)
[»] scaffold0131 (2 HSPs)
scaffold0131 (6-137)||(14247-14377)
scaffold0131 (107-148)||(15392-15433)
[»] chr2 (49 HSPs)
chr2 (1-138)||(17849374-17849511)
chr2 (1-138)||(19007897-19008034)
chr2 (1-148)||(14837525-14837673)
chr2 (1-156)||(22707593-22707749)
chr2 (1-145)||(28196892-28197036)
chr2 (1-148)||(3022429-3022576)
chr2 (1-148)||(6258668-6258815)
chr2 (1-148)||(22287187-22287334)
chr2 (1-126)||(5375218-5375344)
chr2 (1-157)||(21520531-21520691)
chr2 (1-137)||(28459054-28459188)
chr2 (1-157)||(6263990-6264146)
chr2 (1-133)||(15539396-15539527)
chr2 (1-148)||(42923357-42923507)
chr2 (1-98)||(22407355-22407452)
chr2 (1-159)||(22162864-22163020)
chr2 (60-150)||(27105118-27105208)
chr2 (23-132)||(34979456-34979565)
chr2 (6-150)||(7462793-7462940)
chr2 (1-150)||(43623427-43623578)
chr2 (30-137)||(38020366-38020473)
chr2 (34-138)||(13909902-13910003)
chr2 (34-150)||(45279846-45279959)
chr2 (1-84)||(44288982-44289065)
chr2 (51-157)||(11739418-11739524)
chr2 (1-131)||(23871073-23871205)
chr2 (60-157)||(36560978-36561074)
chr2 (60-148)||(36558727-36558814)
chr2 (4-155)||(45238841-45238992)
chr2 (1-119)||(17848697-17848814)
chr2 (66-148)||(22874431-22874513)
chr2 (60-137)||(23452094-23452171)
chr2 (36-155)||(19501842-19501958)
chr2 (41-137)||(19504194-19504288)
chr2 (60-138)||(35215449-35215526)
chr2 (34-134)||(24162084-24162181)
chr2 (60-137)||(42453798-42453874)
chr2 (75-148)||(45332026-45332098)
chr2 (25-140)||(38414042-38414156)
chr2 (60-138)||(35217826-35217903)
chr2 (1-83)||(40031968-40032051)
chr2 (66-138)||(20592395-20592467)
chr2 (7-157)||(20146456-20146600)
chr2 (60-119)||(42064819-42064878)
chr2 (26-138)||(11577974-11578082)
chr2 (78-148)||(37962797-37962867)
chr2 (7-148)||(17897105-17897238)
chr2 (26-97)||(31732685-31732754)
chr2 (108-148)||(42923299-42923339)
[»] scaffold0005 (3 HSPs)
scaffold0005 (22-157)||(50325-50460)
scaffold0005 (22-150)||(52324-52452)
scaffold0005 (34-149)||(183487-183599)
[»] chr7 (67 HSPs)
chr7 (1-132)||(22251452-22251583)
chr7 (1-157)||(13099314-13099472)
chr7 (1-129)||(39145856-39145984)
chr7 (1-150)||(42330850-42330995)
chr7 (1-139)||(443887-444027)
chr7 (1-145)||(9679350-9679495)
chr7 (1-129)||(21990441-21990570)
chr7 (1-157)||(44724870-44725025)
chr7 (1-157)||(4295778-4295932)
chr7 (6-157)||(21678360-21678509)
chr7 (1-150)||(31434896-31435044)
chr7 (1-158)||(26804801-26804959)
chr7 (1-158)||(42223449-42223604)
chr7 (1-150)||(21591993-21592141)
chr7 (6-150)||(27306080-27306225)
chr7 (4-132)||(9681114-9681243)
chr7 (1-138)||(11355549-11355688)
chr7 (1-139)||(37411982-37412123)
chr7 (3-148)||(21680323-21680466)
chr7 (34-157)||(7471818-7471938)
chr7 (34-157)||(38394317-38394437)
chr7 (34-155)||(11759458-11759576)
chr7 (60-150)||(28487908-28487997)
chr7 (8-148)||(24465832-24465969)
chr7 (34-157)||(20297693-20297813)
chr7 (34-150)||(9027038-9027151)
chr7 (34-157)||(28485896-28486016)
chr7 (34-136)||(35960-36059)
chr7 (34-140)||(20299791-20299894)
chr7 (1-157)||(24748886-24749038)
chr7 (34-148)||(25542859-25542970)
chr7 (34-155)||(40836582-40836701)
chr7 (60-150)||(44919-45008)
chr7 (34-148)||(1606710-1606821)
chr7 (34-136)||(1850312-1850411)
chr7 (1-150)||(20626329-20626477)
chr7 (1-150)||(20630220-20630368)
chr7 (1-150)||(20642639-20642787)
chr7 (34-155)||(7469863-7469980)
chr7 (1-148)||(22394014-22394155)
chr7 (60-150)||(48458008-48458096)
chr7 (60-137)||(7092070-7092147)
chr7 (60-157)||(7094298-7094394)
chr7 (34-138)||(7351508-7351609)
chr7 (6-148)||(27832494-27832632)
chr7 (34-148)||(3036055-3036166)
chr7 (34-148)||(18345872-18345983)
chr7 (36-150)||(38396972-38397082)
chr7 (37-138)||(7349134-7349232)
chr7 (60-150)||(43253362-43253450)
chr7 (26-138)||(7188853-7188962)
chr7 (60-135)||(40946685-40946759)
chr7 (60-137)||(2935624-2935700)
chr7 (6-140)||(26295742-26295871)
chr7 (36-155)||(3878911-3879028)
chr7 (80-157)||(40550204-40550280)
chr7 (80-138)||(1046774-1046831)
chr7 (80-157)||(1049126-1049203)
chr7 (80-148)||(22137454-22137521)
chr7 (80-148)||(40552481-40552548)
chr7 (9-157)||(6349097-6349239)
chr7 (7-137)||(24813364-24813490)
chr7 (85-137)||(1502832-1502883)
chr7 (103-155)||(31153690-31153741)
chr7 (80-138)||(20137008-20137066)
chr7 (1-49)||(20137061-20137107)
chr7 (108-147)||(25357331-25357371)
[»] scaffold0045 (1 HSPs)
scaffold0045 (1-150)||(85521-85669)
[»] scaffold0011 (1 HSPs)
scaffold0011 (4-150)||(35887-36035)
[»] scaffold0031 (1 HSPs)
scaffold0031 (4-150)||(79478-79627)
[»] scaffold0339 (1 HSPs)
scaffold0339 (26-148)||(4309-4431)
[»] scaffold0004 (1 HSPs)
scaffold0004 (1-157)||(80149-80308)
[»] scaffold0154 (1 HSPs)
scaffold0154 (1-150)||(11318-11471)
[»] scaffold1674 (1 HSPs)
scaffold1674 (34-148)||(1298-1409)
[»] scaffold0025 (1 HSPs)
scaffold0025 (34-137)||(69149-69250)
[»] scaffold0267 (1 HSPs)
scaffold0267 (36-148)||(357-467)
[»] scaffold0068 (1 HSPs)
scaffold0068 (60-150)||(29524-29612)
[»] scaffold0127 (1 HSPs)
scaffold0127 (41-157)||(12712-12825)
[»] scaffold0038 (1 HSPs)
scaffold0038 (34-137)||(41341-41441)
[»] scaffold0370 (1 HSPs)
scaffold0370 (36-138)||(1309-1408)
[»] scaffold0472 (1 HSPs)
scaffold0472 (34-148)||(6529-6640)
[»] scaffold0891 (1 HSPs)
scaffold0891 (34-137)||(4535-4635)
[»] scaffold0468 (1 HSPs)
scaffold0468 (7-137)||(1509-1634)
[»] scaffold0140 (2 HSPs)
scaffold0140 (80-157)||(22491-22567)
scaffold0140 (80-148)||(24766-24833)
[»] scaffold0250 (1 HSPs)
scaffold0250 (81-137)||(3254-3309)
[»] scaffold1899 (1 HSPs)
scaffold1899 (92-145)||(1-53)
[»] scaffold0133 (1 HSPs)
scaffold0133 (6-140)||(5104-5233)


Alignment Details
Target: chr6 (Bit Score: 138; Significance: 3e-72; HSPs: 55)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 1 - 182
Target Start/End: Complemental strand, 30728822 - 30728641
Alignment:
Q  1 ttcttttgtgttctctcttcctttctctctcgctgttttttacttttgggttgtgtttataattgttccatatactttgttttggttgcttgattatccc 100  Q
    |||||||||||| |||||||||||||||||||||||||| ||||||||  |||| ||||||||||||||||| ||||||||||||||| |||| ||||||    
T  30728822 ttcttttgtgttatctcttcctttctctctcgctgttttctacttttgacttgtatttataattgttccatacactttgttttggttgtttgactatccc 30728723  T
Q  101 ttactcgacacatcaagtttgttattggtgtgatttttcaacgaattcgctacaatttggtttgccattaattcatgtgttt 182  Q
    || ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  30728722 ttgctccacacatcaagtttgttattggtgtgatttttcaacgaattcgctacaatttggtttgccattaattcatgcgttt 30728641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 1 - 157
Target Start/End: Complemental strand, 3631937 - 3631781
Alignment:
Q  1 ttcttttgtgttctctcttcctttctctctcgctgttttttacttttgggttgtgtttataattgttccatatactttgttttggttgcttgattatccc 100  Q
    |||||||||||| ||||||||||| ||||||| |||||| ||||||||| |||||||||||||||||||||| |||||||||||||||| | |||||| |    
T  3631937 ttcttttgtgttatctcttcctttttctctcgatgttttctacttttggcttgtgtttataattgttccatacactttgttttggttgcctaattatcac 3631838  T
Q  101 ttactcgacacatcaagtttgttattggtgtgatttttcaacgaattcgctacaatt 157  Q
    || ||| |||| |||||||||||||||||||| ||||||| ||||||| | ||||||    
T  3631837 ttgctccacacgtcaagtttgttattggtgtgttttttcatcgaattcacaacaatt 3631781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 1 - 150
Target Start/End: Original strand, 9020242 - 9020394
Alignment:
Q  1 ttcttttgtgttctctcttcctttctctctcgctgtttttt---acttttgggttgtgtttataattgttccatatactttgttttggttgcttgattat 97  Q
    ||||||||||||||||||||| || |||||||||||| |||   |||||||| |||| ||||||||||||||||| |||||||||||||||  |||||||    
T  9020242 ttcttttgtgttctctcttcccttttctctcgctgttgttttctacttttggcttgtatttataattgttccatacactttgttttggttgtctgattat 9020341  T
Q  98 cccttactcgacacatcaagtttgttattggtgtgatttttcaacgaattcgc 150  Q
    | ||| ||| ||||||||||||||||||||||||||||||||| |||||||||    
T  9020342 ctcttgctccacacatcaagtttgttattggtgtgatttttcatcgaattcgc 9020394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 13 - 157
Target Start/End: Original strand, 3394695 - 3394840
Alignment:
Q  13 ctctcttcctttctctctcgctgttttttacttttgggttgtgtttataattgttccatatactttg-ttttggttgcttgattatcccttactcgacac 111  Q
    ||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||| |||||| |||||||||||||||||||| || ||| ||||    
T  3394695 ctctcttcctttctctctcgctgttttctacttttggcttgtgtttataattgttccatacactttgtttttggttgcttgattatccatttctccacac 3394794  T
Q  112 atcaagtttgttattggtgtgatttttcaacgaattcgctacaatt 157  Q
    |||||| || ||||||||||| ||| ||| ||||||||| ||||||    
T  3394795 atcaagatttttattggtgtgttttctcatcgaattcgcaacaatt 3394840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 7 - 147
Target Start/End: Original strand, 15346668 - 15346806
Alignment:
Q  7 tgtgttctctcttcctttctctctcgctgttttttacttttgggttgtgtttataattgttccatatactttgttttggttgcttgattatcccttactc 106  Q
    ||||||||||||| ||||||||   | |||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||  ||    
T  15346668 tgtgttctctctttctttctctt--gttgttttctacttttggcttgtgtttataattgttccatatactttgttttggttgcttgattatcacttgttc 15346765  T
Q  107 gacacatcaagtttgttattggtgtgatttttcaacgaatt 147  Q
     ||||||||||||||||||||||||||||||||| ||||||    
T  15346766 cacacatcaagtttgttattggtgtgatttttcatcgaatt 15346806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 4 - 158
Target Start/End: Complemental strand, 24338443 - 24338291
Alignment:
Q  4 ttttgtgttctctcttcctttctctctcgctgttttttacttttgggttgtgtttataattgttccatatactttgttttggttgcttgattatccctta 103  Q
    ||||||||| ||||||| ||||||||  | |||||| ||||||||| |||||||||||||||||||||| |||||||||||||||||||| |||| |||     
T  24338443 ttttgtgttatctcttcttttctctc--gttgttttctacttttggtttgtgtttataattgttccatacactttgttttggttgcttgactatctcttg 24338346  T
Q  104 ctcgacacatcaagtttgttattggtgtgatttttcaacgaattcgctacaattt 158  Q
    ||| |||||||||||||||||||| |||||||||||| ||||||| | |||||||    
T  24338345 ctccacacatcaagtttgttattgatgtgatttttcatcgaattcacaacaattt 24338291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 1 - 148
Target Start/End: Complemental strand, 3629863 - 3629717
Alignment:
Q  1 ttcttttgtgttctctcttcctttctctctcgctgttttttacttttggg-ttgtgtttataattgttccatatactttgttttggttgcttgattatcc 99  Q
    |||||||||||||||||||| ||||||||  | |||||| ||||||| || |||||||||||||||||||||| ||||||||||||||||||||||||||    
T  3629863 ttcttttgtgttctctcttcttttctctc--gttgttttctactttttggcttgtgtttataattgttccatacactttgttttggttgcttgattatcc 3629766  T
Q  100 cttactcgacacatcaagtttgttattggtgtgatttttcaacgaattc 148  Q
     || ||| ||||||||||||||||||||||||| ||| ||| |||||||    
T  3629765 tttgctccacacatcaagtttgttattggtgtgttttctcatcgaattc 3629717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 1 - 148
Target Start/End: Complemental strand, 11983027 - 11982878
Alignment:
Q  1 ttcttttgtgttctctcttcctttctctctcgctgtttttt---acttttgggttgtgtttataattgttccatatactttgttttggttgcttgattat 97  Q
    |||||||||||||||||||| ||| |||||||||||| |||   |||||||| ||||| || ||||||||||||| ||||||||||||||||||||||||    
T  11983027 ttcttttgtgttctctcttcttttttctctcgctgttgttttctacttttggcttgtgattgtaattgttccatacactttgttttggttgcttgattat 11982928  T
Q  98 cccttactcgacacatcaagtttgttattggtgtgatttttcaacgaattc 148  Q
     |||| ||| |||||||||| |||||||||||||||||||||| |||||||    
T  11982927 tccttgctccacacatcaag-ttgttattggtgtgatttttcatcgaattc 11982878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 7 - 148
Target Start/End: Original strand, 15367353 - 15367492
Alignment:
Q  7 tgtgttctctcttcctttctctctcgctgttttttacttttgggttgtgtttataattgttccatatactttgttttggttgcttgattatcccttactc 106  Q
    ||||||||||||| |||||||||  |   |||| ||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||| | | |||    
T  15367353 tgtgttctctctttctttctctc--gtatttttctacttttggcttgtgtttataattgttccatacactttgttttggttgcttgattatcacatgctc 15367450  T
Q  107 gacacatcaagtttgttattggtgtgatttttcaacgaattc 148  Q
     ||||||||||||||||||||||||||||||||| |||||||    
T  15367451 cacacatcaagtttgttattggtgtgatttttcatcgaattc 15367492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 1 - 129
Target Start/End: Complemental strand, 1069716 - 1069588
Alignment:
Q  1 ttcttttgtgttctctcttcctttctctctcgctgttttttacttttgggttgtgtttataattgttccatatactttgttttggttgcttgattatccc 100  Q
    ||||||| |||||||||||| |||||||||||||||||| ||||||| | |||||||||||||||||||||| ||||||||||| |||||||| ||||||    
T  1069716 ttcttttatgttctctcttcttttctctctcgctgttttctactttttgcttgtgtttataattgttccatacactttgttttgattgcttgactatccc 1069617  T
Q  101 ttactcgacacatcaagtttgttattggt 129  Q
    || ||| | ||||| | ||||||||||||    
T  1069616 ttgctccatacatcgaatttgttattggt 1069588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 1 - 150
Target Start/End: Complemental strand, 3233723 - 3233571
Alignment:
Q  1 ttcttttgtgttctctcttcctttctctctcgctgtttttt---acttttgggttgtgtttataattgttccatatactttg-ttttggttgcttgatta 96  Q
    |||||||||||||||||||||||| |||||||||||| |||   |||||||| ||||||||||||||||| |||  |||||| |||||||||| ||||||    
T  3233723 ttcttttgtgttctctcttccttt-tctctcgctgttgttttctacttttggtttgtgtttataattgtttcatgcactttgattttggttgcctgatta 3233625  T
Q  97 tcccttactcgacacatcaagtttgttattggtgtgatttttcaacgaattcgc 150  Q
    || ||||||| ||||||||| |||||||||| |||| ||| ||| |||||||||    
T  3233624 tcacttactccacacatcaaatttgttattgatgtgttttctcatcgaattcgc 3233571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 26 - 148
Target Start/End: Original strand, 25480219 - 25480340
Alignment:
Q  26 tctctcgctgttttttacttttgggttgtgtttataattgttccatatactttgttttggttgcttgattatcccttactcgacacatcaagtttgttat 125  Q
    |||||||||||||| ||||||||  ||||| ||||||||||| |||| ||||| ||||||||||| || |||||||||||| ||||||||| | | ||||    
T  25480219 tctctcgctgttttctacttttgacttgtgattataattgtttcatacactttattttggttgctcgactatcccttactctacacatcaaatat-ttat 25480317  T
Q  126 tggtgtgatttttcaacgaattc 148  Q
    ||||||||||||||| |||||||    
T  25480318 tggtgtgatttttcatcgaattc 25480340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 60 - 148
Target Start/End: Complemental strand, 29754642 - 29754555
Alignment:
Q  60 taattgttccatatactttgttttggttgcttgattatcccttactcgacacatcaagtttgttattggtgtgatttttcaacgaattc 148  Q
    |||||||||||||  |||||||||||||||||||||||||||| ||| |||||||||| |||||||||||||||||||||| |||||||    
T  29754642 taattgttccatacgctttgttttggttgcttgattatcccttgctccacacatcaag-ttgttattggtgtgatttttcatcgaattc 29754555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 60 - 138
Target Start/End: Complemental strand, 4816164 - 4816087
Alignment:
Q  60 taattgttccatatactttgttttggttgcttgattatcccttactcgacacatcaagtttgttattggtgtgattttt 138  Q
    ||||||||||||| ||||||||||||||||||||||||||||| ||| |||||||||| ||||||||||||||||||||    
T  4816164 taattgttccatacactttgttttggttgcttgattatcccttgctccacacatcaag-ttgttattggtgtgattttt 4816087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 150
Target Start/End: Original strand, 13057511 - 13057655
Alignment:
Q  1 ttcttttgtgttctctcttcctttctctctcgctgttttttacttttgggttgtgtttataattgttccatatactttgttttggttgcttgattatccc 100  Q
    ||||||||||||||||||| |||| |||||  ||||||| ||||||||  ||||| ||||||||||| |  |  |||| | ||||||||||||||||||     
T  13057511 ttcttttgtgttctctctttcttt-tctctatctgttttctacttttgt-ttgtgattataattgttgccca--cttt-tattggttgcttgattatcct 13057605  T
Q  101 ttactcgacacatcaagtttgttattggtgtgatttttcaacgaattcgc 150  Q
    || ||| ||||||||||||||||||||||||||||||||| |||||||||    
T  13057606 ttgctccacacatcaagtttgttattggtgtgatttttcatcgaattcgc 13057655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 34 - 134
Target Start/End: Complemental strand, 14507134 - 14507037
Alignment:
Q  34 tgttttttacttttgggttgtgtttataattgttccatatactttgttttggttgcttgattatcccttactcgacacatcaagtttgttattggtgtga 133  Q
    |||||| ||||||||| |||| ||||  ||||||||||| ||||||||||||||||||||||||||||| ||| |||||||||| |||||||||||||||    
T  14507134 tgttttctacttttggcttgtattta--attgttccatacactttgttttggttgcttgattatcccttgctccacacatcaag-ttgttattggtgtga 14507038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 60 - 157
Target Start/End: Complemental strand, 26068328 - 26068232
Alignment:
Q  60 taattgttccatatactttgttttggttgcttgattatcccttactcgacacatcaagtttgttattggtgtgatttttcaacgaattcgctacaatt 157  Q
    |||||||||||||  ||||||||||||||||| |||||||||| ||| |||||||||| |||||||||||||||||||||| ||||||| | ||||||    
T  26068328 taattgttccatacgctttgttttggttgcttaattatcccttgctccacacatcaag-ttgttattggtgtgatttttcatcgaattcacaacaatt 26068232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 148
Target Start/End: Original strand, 32280313 - 32280457
Alignment:
Q  1 ttcttttgtgttctctcttcctttctctctcgctgttttttacttttgggttgtgtttataattgttccatatactttgttttggttgcttgattatccc 100  Q
    |||| ||||||||||||||||||||||||  | | |||| ||||||||| |||| |||||||||||| |  |    |||| ||||||||||||||||| |    
T  32280313 ttctcttgtgttctctcttcctttctctcatgttattttctacttttggcttgtatttataattgttacccac---ttgtattggttgcttgattatcac 32280409  T
Q  101 ttactcgacacatcaagtttgttattggtgtgatttttcaacgaattc 148  Q
    |||||| | ||||||||||||||||| ||||||||||| | |||||||    
T  32280410 ttactccatacatcaagtttgttatttgtgtgattttttatcgaattc 32280457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 60 - 148
Target Start/End: Complemental strand, 26066054 - 26065967
Alignment:
Q  60 taattgttccatatactttgttttggttgcttgattatcccttactcgacacatcaagtttgttattggtgtgatttttcaacgaattc 148  Q
    |||||||||||||  ||||||||||||||||| |||||||||| ||| |||||||||| |||||||||||||||||||||| |||||||    
T  26066054 taattgttccatacgctttgttttggttgcttaattatcccttgctccacacatcaag-ttgttattggtgtgatttttcatcgaattc 26065967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 148
Target Start/End: Original strand, 22490931 - 22491073
Alignment:
Q  1 ttcttttgtgttctctcttcctttctctctcgctgttttttacttttgggttgtgtttataattgttccatatactttgttttggttgcttgattatccc 100  Q
    |||||||||| |||||||| |||||||||  | |||||| |||||||||  | |||||||||||||| |  |    |||||||||||||||||||||||     
T  22490931 ttcttttgtgctctctctttctttctctc--gttgttttctacttttggcctatgtttataattgttacccac---ttgttttggttgcttgattatcct 22491025  T
Q  101 ttactcgacacatcaagtttgttattggtgtgatttttcaacgaattc 148  Q
    |  ||| |||||| |||||||||||||||||||||||||| |||||||    
T  22491026 tagctccacacattaagtttgttattggtgtgatttttcatcgaattc 22491073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 159
Target Start/End: Complemental strand, 15541138 - 15540985
Alignment:
Q  1 ttcttttgtgttctctcttcctttctctctcgctgttttttacttttgggttgtgtttataattgtt-ccatatactttgttttggttgcttgattatcc 99  Q
    |||||||||||||||||||  ||||||||||| |||||| || |||||  ||||| |||||| |||| |||   |||| ||||||||| ||||| |||||    
T  15541138 ttcttttgtgttctctcttt-tttctctctcgttgttttctaattttgt-ttgtgattataactgttacca---actt-gttttggtttcttgactatcc 15541045  T
Q  100 cttactcgacacatcaagtttgttattggtgtgatttttcaacgaattcgctacaatttg 159  Q
    ||| ||| |||||||||||||||||||||| |||||||||| |||| |||| ||||||||    
T  15541044 cttgctccacacatcaagtttgttattggtttgatttttcatcgaagtcgcaacaatttg 15540985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 69 - 150
Target Start/End: Original strand, 18322482 - 18322562
Alignment:
Q  69 catatactttgttttggttgcttgattatcccttactcgacacatcaagtttgttattggtgtgatttttcaacgaattcgc 150  Q
    |||| ||||||||||||||||||||||||||||| ||| |||||||||| ||||||||||||||||||||||  ||||||||    
T  18322482 catacactttgttttggttgcttgattatcccttgctccacacatcaag-ttgttattggtgtgatttttcatagaattcgc 18322562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 69 - 157
Target Start/End: Complemental strand, 26932487 - 26932400
Alignment:
Q  69 catatactttgttttggttgcttgattatcccttactcgacacatcaagtttgttattggtgtgatttttcaacgaattcgctacaatt 157  Q
    |||| ||||||||||||||||||||||||||||| ||| |||||||||| |||||||||||||||||||||| | ||||| | ||||||    
T  26932487 catacactttgttttggttgcttgattatcccttgctccacacatcaag-ttgttattggtgtgatttttcatcaaattcacaacaatt 26932400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 34 - 137
Target Start/End: Complemental strand, 28241279 - 28241179
Alignment:
Q  34 tgttttttacttttgggttgtgtttataattgttccatatactttgttttggttgcttgattatcccttactcgacacatcaagtttgttattggtgtga 133  Q
    |||||| ||||||||| |||| ||||  ||||||||||| ||||||||||| ||||||||||||| ||| ||| |||||||||| |||||||||||||||    
T  28241279 tgttttctacttttggcttgtattta--attgttccatacactttgttttgattgcttgattatctcttgctccacacatcaag-ttgttattggtgtga 28241183  T
Q  134 tttt 137  Q
    ||||    
T  28241182 tttt 28241179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 34 - 155
Target Start/End: Complemental strand, 2628844 - 2628726
Alignment:
Q  34 tgttttttacttttgggttgtgtttataattgttccatatactttg-ttttggttgcttgattatcccttactcgacacatcaagtttgttattggtgtg 132  Q
    |||||| ||||||||| |||| ||||||| |  |||||| |||||| ||||||||||||||||||||||| ||| |||||||||| ||||||||||||||    
T  2628844 tgttttctacttttggcttgtatttataact--tccatacactttgattttggttgcttgattatcccttgctccacacatcaag-ttgttattggtgtg 2628748  T
Q  133 atttttcaacgaattcgctacaa 155  Q
    | |||||| ||||||||| ||||    
T  2628747 a-ttttcatcgaattcgcaacaa 2628726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 34 - 155
Target Start/End: Complemental strand, 14458725 - 14458606
Alignment:
Q  34 tgttttttacttttgggttgtgtttataattgttccatatactttg-ttttggttgcttgattatcccttactcgacacatcaagtttgttattggtgtg 132  Q
    |||||| ||||||||| |||| ||||  ||||||||||| |||||| |||||||||| ||||||||| |||||| |||||||||| |  |||||||||||    
T  14458725 tgttttctacttttggcttgtattta--attgttccatacactttgattttggttgcctgattatccattactccacacatcaagcta-ttattggtgtg 14458629  T
Q  133 atttttcaacgaattcgctacaa 155  Q
    |||||||| ||||||||| ||||    
T  14458628 atttttcatcgaattcgcaacaa 14458606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 6 - 138
Target Start/End: Complemental strand, 15530156 - 15530022
Alignment:
Q  6 ttgtgttctctcttccttt-ctctctcgctgttttttacttttgggttgtgtttataattgttccatatactttg-ttttggttgcttgattatccctta 103  Q
    ||||||||||||||| ||| ||||   | |||||| ||||||||| |||| ||||||||||||||||| ||||   ||||| |||  ||||||| |||||    
T  15530156 ttgtgttctctcttctttttctctgctgttgttttctacttttggcttgtatttataattgttccatacacttaaattttgattgtctgattattcctta 15530057  T
Q  104 ctcgacacatcaagtttgttattggtgtgattttt 138  Q
    ||| |||||||||||||||||||||||||| ||||    
T  15530056 ctccacacatcaagtttgttattggtgtgagtttt 15530022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 34 - 139
Target Start/End: Original strand, 26065335 - 26065440
Alignment:
Q  34 tgttttttacttttgggttgtgtttataattgttccatatactttg-ttttggttgcttgattatcccttactcgacacatcaagtttgttattggtgtg 132  Q
    |||||| |||||||||  |||| |||||| |||||||||  ||||| |||||||||||||| |||||||| ||| |||||||||| ||||||||||||||    
T  26065335 tgttttctacttttggcatgtgattataactgttccatacgctttgattttggttgcttgactatcccttgctccacacatcaag-ttgttattggtgtg 26065433  T
Q  133 atttttc 139  Q
    |||||||    
T  26065434 atttttc 26065440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 34 - 139
Target Start/End: Original strand, 26085304 - 26085409
Alignment:
Q  34 tgttttttacttttgggttgtgtttataattgttccatatactttg-ttttggttgcttgattatcccttactcgacacatcaagtttgttattggtgtg 132  Q
    |||||| |||||||||  |||| |||||| |||||||||  ||||| |||||||||||||| |||||||| ||| |||||||||| ||||||||||||||    
T  26085304 tgttttctacttttggcatgtgattataactgttccatacgctttgattttggttgcttgactatcccttgctccacacatcaag-ttgttattggtgtg 26085402  T
Q  133 atttttc 139  Q
    |||||||    
T  26085403 atttttc 26085409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 80 - 157
Target Start/End: Complemental strand, 8717268 - 8717192
Alignment:
Q  80 ttttggttgcttgattatcccttactcgacacatcaagtttgttattggtgtgatttttcaacgaattcgctacaatt 157  Q
    ||||||||||||||||||||||| ||| |||||||||| |||||||||||||||||||||| ||||||| | ||||||    
T  8717268 ttttggttgcttgattatcccttgctccacacatcaag-ttgttattggtgtgatttttcatcgaattcacaacaatt 8717192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 148
Target Start/End: Original strand, 14466640 - 14466785
Alignment:
Q  1 ttcttttgtgttctctcttcctttctctctc-gctgttttttacttttgggttgtgtttataattgttccatatactttgttttggttgcttgattatcc 99  Q
    |||| |||||||||||||| ||||||||| | |||||||| ||||||||  ||||| |||||| | |  |||| | |||||||||||||||||| ||||     
T  14466640 ttctcttgtgttctctctttctttctctcgctgctgttttctacttttgt-ttgtgattataacttt--catacattttgttttggttgcttgactatca 14466736  T
Q  100 cttactcgacacatcaagtttgttattggtgtgatttttcaacgaattc 148  Q
    ||| ||  ||||||||| ||| ||||||||||||||||||| |||||||    
T  14466737 cttgctgcacacatcaaatttattattggtgtgatttttcatcgaattc 14466785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 36 - 136
Target Start/End: Complemental strand, 19704521 - 19704422
Alignment:
Q  36 ttttttacttttgggttgtgtttataattgttccatatactttg--ttttggttgcttgattatcccttactcgacacatcaagtttgttattggtgtga 133  Q
    |||| ||||||||| |||| ||||  ||||||||||| ||||||  ||||||||||||||||||||||| ||| |||||||||| |||||||||||||||    
T  19704521 ttttctacttttggcttgtattta--attgttccatacactttgatttttggttgcttgattatcccttgctccacacatcaag-ttgttattggtgtga 19704425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 34 - 156
Target Start/End: Complemental strand, 1230207 - 1230088
Alignment:
Q  34 tgttttttacttttgggttgtgtttataattgttccatatactttgttttggttgcttgattatcccttactcgacacatcaagtttgttattggtgtga 133  Q
    |||||| ||||||||| || ||| | |||||||| |||| ||||| ||||||||||||||||||| |||  || |||||||||| |||||||||||||||    
T  1230207 tgttttatacttttggctt-tgtatttaattgtttcatacactttattttggttgcttgattatctcttgatccacacatcaag-ttgttattggtgtga 1230110  T
Q  134 tttttcaacgaattcgctacaat 156  Q
    ||||| | ||||||||| |||||    
T  1230109 ttttt-atcgaattcgcaacaat 1230088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 60 - 150
Target Start/End: Original strand, 30967581 - 30967669
Alignment:
Q  60 taattgttccatatactttgttttggttgcttgattatcccttactcgacacatcaagtttgttattggtgtgatttttcaacgaattcgc 150  Q
    ||||| ||||||  |||||||||||||| |||||||||| ||| ||| |||||||||| ||||||||||||||| ||||||||||||||||    
T  30967581 taattattccatgcactttgttttggttacttgattatctcttgctccacacatcaag-ttgttattggtgtga-ttttcaacgaattcgc 30967669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 183 - 232
Target Start/End: Complemental strand, 30727379 - 30727330
Alignment:
Q  183 ataatcttcaattttcctcattctggtctgtttagccgtgaagtttatga 232  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||    
T  30727379 ataatcttcaattttcctcattctggtctgtttagccgtgaaatttatga 30727330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 34 - 137
Target Start/End: Original strand, 33309212 - 33309313
Alignment:
Q  34 tgttttttacttttgggttgtgtttataattgttccatatactttg-ttttggttgcttgattatcccttactcgacacatcaagtttgttattggtgtg 132  Q
    |||||| ||||||||| |||| ||||  |||||||||||  ||||| |||||||||||| |||||||||| ||| |||||||||| ||||||||||||||    
T  33309212 tgttttctacttttggcttgtattta--attgttccatacgctttgattttggttgcttaattatcccttgctccacacatcaag-ttgttattggtgtg 33309308  T
Q  133 atttt 137  Q
    |||||    
T  33309309 atttt 33309313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 34 - 137
Target Start/End: Original strand, 33311481 - 33311582
Alignment:
Q  34 tgttttttacttttgggttgtgtttataattgttccatatactttg-ttttggttgcttgattatcccttactcgacacatcaagtttgttattggtgtg 132  Q
    |||||| ||||||||| |||| ||||  |||||||||||  ||||| |||||||||||| |||||||||| ||| |||||||||| ||||||||||||||    
T  33311481 tgttttctacttttggcttgtattta--attgttccatacgctttgattttggttgcttaattatcccttgctccacacatcaag-ttgttattggtgtg 33311577  T
Q  133 atttt 137  Q
    |||||    
T  33311578 atttt 33311582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 80 - 148
Target Start/End: Complemental strand, 12195427 - 12195360
Alignment:
Q  80 ttttggttgcttgattatcccttactcgacacatcaagtttgttattggtgtgatttttcaacgaattc 148  Q
    |||||||||||| |||||||||| ||| |||||||||| |||||||||||||||||||||| |||||||    
T  12195427 ttttggttgcttaattatcccttgctccacacatcaag-ttgttattggtgtgatttttcatcgaattc 12195360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 4 - 59
Target Start/End: Complemental strand, 12161553 - 12161498
Alignment:
Q  4 ttttgtgttctctcttcctttctctctcgctgttttttacttttgggttgtgttta 59  Q
    |||||||||||||||||||||||||||||||||||| ||||||||  |||||||||    
T  12161553 ttttgtgttctctcttcctttctctctcgctgttttctacttttgtcttgtgttta 12161498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 80 - 138
Target Start/End: Complemental strand, 5273129 - 5273072
Alignment:
Q  80 ttttggttgcttgattatcccttactcgacacatcaagtttgttattggtgtgattttt 138  Q
    ||||||||||||||||||||||| ||| |||||||||| ||||||||||||||||||||    
T  5273129 ttttggttgcttgattatcccttgctccacacatcaag-ttgttattggtgtgattttt 5273072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 69 - 157
Target Start/End: Original strand, 17012417 - 17012505
Alignment:
Q  69 catatactttgttttggttgcttgattatcccttactcgacacatcaagtttgttattggtgtgatttttcaacgaattcgctacaatt 157  Q
    |||| ||||||||||||||||||||||||   || ||| ||||||||||| | |||||| |||||||||||| ||||||| | ||||||    
T  17012417 catacactttgttttggttgcttgattattatttgctccacacatcaagtattttattgttgtgatttttcatcgaattcacaacaatt 17012505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 36 - 138
Target Start/End: Complemental strand, 20915312 - 20915213
Alignment:
Q  36 ttttttacttttgggttgtgtttataattgttccatatactttgttttggttgcttgattatcccttactcgacacatcaagtttgttattggtgtgatt 135  Q
    |||| ||||||||| |||| ||||  ||| || |||| ||||||||||||||||||||||| ||||| | | |||||||||| || ||||||||||||||    
T  20915312 ttttctacttttggcttgtattta--attatttcatacactttgttttggttgcttgattaccccttgccccacacatcaag-ttattattggtgtgatt 20915216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 4 - 72
Target Start/End: Complemental strand, 12186066 - 12186000
Alignment:
Q  4 ttttgtgttctctcttcctttctctctcgctgttttttacttttgggttgtgtttataattgttccata 72  Q
    |||||||||||||||| |||||||||  |||||||| |||||||   ||||||||||||||||||||||    
T  12186066 ttttgtgttctctctttctttctctc--gctgttttctactttttccttgtgtttataattgttccata 12186000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 95 - 150
Target Start/End: Original strand, 13040173 - 13040228
Alignment:
Q  95 tatcccttactcgacacatcaagtttgttattggtgtgatttttcaacgaattcgc 150  Q
    ||||| || ||| ||||||||||||||||||| ||||||||||||| |||||||||    
T  13040173 tatccattgctccacacatcaagtttgttattagtgtgatttttcatcgaattcgc 13040228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 7 - 137
Target Start/End: Original strand, 19696763 - 19696887
Alignment:
Q  7 tgtgttctctcttcctttctctctcgctgttttt-tacttttgggttgtgtttataattgttccatatactttgttttggttgcttgattatcccttact 105  Q
    ||||||||||||| |||||||||  ||||||||| ||||||||  |||||||||||| |||  ||   ||||||||| |||||||||||||  | || ||    
T  19696763 tgtgttctctctttctttctctc--gctgtttttctacttttgt-ttgtgtttataactgt--cacccactttgtttcggttgcttgatta--ctttgct 19696855  T
Q  106 cgacacatcaagtttgttattggtgtgatttt 137  Q
    | ||||||||||| | ||||||||||||||||    
T  19696856 ccacacatcaagtattttattggtgtgatttt 19696887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 4 - 37
Target Start/End: Original strand, 10584315 - 10584348
Alignment:
Q  4 ttttgtgttctctcttcctttctctctcgctgtt 37  Q
    ||||||||||||||||||||||||||||||||||    
T  10584315 ttttgtgttctctcttcctttctctctcgctgtt 10584348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 109 - 148
Target Start/End: Complemental strand, 22857888 - 22857849
Alignment:
Q  109 cacatcaagtttgttattggtgtgatttttcaacgaattc 148  Q
    |||||||||| | |||||||||||||||||||||||||||    
T  22857888 cacatcaagtattttattggtgtgatttttcaacgaattc 22857849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 75 - 118
Target Start/End: Original strand, 25477614 - 25477657
Alignment:
Q  75 ctttgttttggttgcttgattatcccttactcgacacatcaagt 118  Q
    ||||||||||||||||||| |||||||||||  |||||||||||    
T  25477614 ctttgttttggttgcttgactatcccttacttcacacatcaagt 25477657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 11 - 62
Target Start/End: Original strand, 26945471 - 26945521
Alignment:
Q  11 ttctctcttcctttctctctcgctgttttttacttttgggttgtgtttataa 62  Q
    ||||||||| |||| |||||||||||||| ||||||||| ||||||||||||    
T  26945471 ttctctctttcttt-tctctcgctgttttctacttttggcttgtgtttataa 26945521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 81 - 155
Target Start/End: Complemental strand, 30034517 - 30034446
Alignment:
Q  81 tttggttgcttgattatcccttactcgacacatcaagtttgttattggtgtgatttttcaacgaattcgctacaa 155  Q
    ||||||||||||||||||| || ||| | |||||||||| ||||||||||||| |||||| ||||||||| ||||    
T  30034517 tttggttgcttgattatcc-ttgctccatacatcaagtt-gttattggtgtga-ttttcatcgaattcgcaacaa 30034446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 54 - 137
Target Start/End: Complemental strand, 6610457 - 6610378
Alignment:
Q  54 tgtttataattgttccatatactttgttttggttgcttgattatcccttactcgacacatcaagtttgttattggtgtgatttt 137  Q
    ||||||||||||||  ||  ||||||||||||||||||||||||   || ||| |||||| |||| | ||||||||||||||||    
T  6610457 tgtttataattgtt--atccactttgttttggttgcttgattat--tttgctccacacattaagtattttattggtgtgatttt 6610378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 108 - 148
Target Start/End: Complemental strand, 28037623 - 28037582
Alignment:
Q  108 acacatcaagt-ttgttattggtgtgatttttcaacgaattc 148  Q
    ||||||||||| || |||||||||||||||||||||||||||    
T  28037623 acacatcaagtatttttattggtgtgatttttcaacgaattc 28037582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 108 - 148
Target Start/End: Original strand, 7294214 - 7294254
Alignment:
Q  108 acacatcaagtttgttattggtgtgatttttcaacgaattc 148  Q
    ||||||||||| | ||||||||||||||||| |||||||||    
T  7294214 acacatcaagtattttattggtgtgattttttaacgaattc 7294254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 97 - 137
Target Start/End: Original strand, 10584355 - 10584395
Alignment:
Q  97 tcccttactcgacacatcaagtttgttattggtgtgatttt 137  Q
    |||||| ||| ||||||||||||||||||||||||| ||||    
T  10584355 tcccttgctccacacatcaagtttgttattggtgtggtttt 10584395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 101 - 148
Target Start/End: Complemental strand, 24501352 - 24501307
Alignment:
Q  101 ttactcgacacatcaagtttgttattggtgtgatttttcaacgaattc 148  Q
    |||||| |||||||| ||||  ||||||||||||||||||||||||||    
T  24501352 ttactctacacatcatgttt--tattggtgtgatttttcaacgaattc 24501307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 120; Significance: 2e-61; HSPs: 79)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 1 - 148
Target Start/End: Complemental strand, 2949232 - 2949085
Alignment:
Q  1 ttcttttgtgttctctcttcctttctctctcgctgttttttacttttgggttgtgtttataattgttccatatactttgttttggttgcttgattatccc 100  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||| ||||| |||||||||||||||||||||    
T  2949232 ttcttttgtgttctctcttcctttctctctcgctgttttctacttttggcttgtgtttataattgttccatacactttattttggttgcttgattatccc 2949133  T
Q  101 ttactcgacacatcaagtttgttattggtgtgatttttcaacgaattc 148  Q
    || ||| ||||||||||||||||||||||||||||||||| |||||||    
T  2949132 ttgctccacacatcaagtttgttattggtgtgatttttcatcgaattc 2949085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 1 - 149
Target Start/End: Complemental strand, 11457475 - 11457327
Alignment:
Q  1 ttcttttgtgttctctcttcctttctctctcgctgttttttacttttgggttgtgtttataattgttccatatactttgttttggttgcttgattatccc 100  Q
    |||||||||||||||||||| |||||||||||||||||| ||||||||| ||||||||| ||||||||||||||||||||||||||||| |||||||| |    
T  11457475 ttcttttgtgttctctcttcttttctctctcgctgttttctacttttggcttgtgtttaaaattgttccatatactttgttttggttgcctgattatcac 11457376  T
Q  101 ttactcgacacatcaagtttgttattggtgtgatttttcaacgaattcg 149  Q
    || ||  ||||||||||||||||||||||||||||||||| ||||||||    
T  11457375 ttgcttcacacatcaagtttgttattggtgtgatttttcatcgaattcg 11457327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 1 - 148
Target Start/End: Complemental strand, 25251274 - 25251127
Alignment:
Q  1 ttcttttgtgttctctcttcctttctctctcgctgttttttacttttgggttgtgtttataattgttccatatactttgttttggttgcttgattatccc 100  Q
    |||||||||||||||||||||||||||||||| |||||| ||||||||| ||||| ||||||||||| |||| |||||||||||||||||||| ||||||    
T  25251274 ttcttttgtgttctctcttcctttctctctcgttgttttctacttttggcttgtgattataattgtttcatacactttgttttggttgcttgactatccc 25251175  T
Q  101 ttactcgacacatcaagtttgttattggtgtgatttttcaacgaattc 148  Q
    || ||| ||||||||||||||||||||||||||||||||| |||||||    
T  25251174 ttgctccacacatcaagtttgttattggtgtgatttttcatcgaattc 25251127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 1 - 148
Target Start/End: Complemental strand, 50248570 - 50248423
Alignment:
Q  1 ttcttttgtgttctctcttcctttctctctcgctgttttttacttttgggttgtgtttataattgttccatatactttgttttggttgcttgattatccc 100  Q
    |||||||||||||||||||||||||||||||| ||||||  |||||||| ||||| |||||||||||||||| |||||||||||||||||||||||||||    
T  50248570 ttcttttgtgttctctcttcctttctctctcgttgttttcaacttttggcttgtggttataattgttccatacactttgttttggttgcttgattatccc 50248471  T
Q  101 ttactcgacacatcaagtttgttattggtgtgatttttcaacgaattc 148  Q
    |||||| ||||||||| ||||||||||||||||||| ||| |||||||    
T  50248470 ttactccacacatcaaatttgttattggtgtgatttatcatcgaattc 50248423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 9 - 148
Target Start/End: Original strand, 13215373 - 13215512
Alignment:
Q  9 tgttctctcttcctttctctctcgctgttttttacttttgggttgtgtttataattgttccatatactttgttttggttgcttgattatcccttactcga 108  Q
    ||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||| ||||||||||||||| |||| |||||||| ||| |    
T  13215373 tgttctctcttcctttctctctcgctgttttctacttttggcttgtgtttataattgttccatacactttgttttggttgtttgactatcccttgctcca 13215472  T
Q  109 cacatcaagtttgttattggtgtgatttttcaacgaattc 148  Q
    |||||||||||| ||||||||||| ||| |||||||||||    
T  13215473 cacatcaagtttattattggtgtgttttctcaacgaattc 13215512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 1 - 155
Target Start/End: Original strand, 18839869 - 18840023
Alignment:
Q  1 ttcttttgtgttctctcttcctttctctctcgctgttttttacttttgggttgtgtttataattgttccatatactttgttttggttgcttgattatccc 100  Q
    |||||| ||||||||||||| |||||||||||||||||| || |||||| |||||||||||||||||||||| ||||||||| | || ||||||||| ||    
T  18839869 ttctttcgtgttctctcttcttttctctctcgctgttttctagttttggcttgtgtttataattgttccatacactttgtttcgattacttgattattcc 18839968  T
Q  101 ttactcgacacatcaagtttgttattggtgtgatttttcaacgaattcgctacaa 155  Q
    || ||| ||||||||||||||||||||||||||||||||| ||||||||| ||||    
T  18839969 ttgctccacacatcaagtttgttattggtgtgatttttcatcgaattcgcaacaa 18840023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 1 - 157
Target Start/End: Complemental strand, 31425015 - 31424859
Alignment:
Q  1 ttcttttgtgttctctcttcctttctctctcgctgttttttacttttgggttgtgtttataattgttccatatactttgttttggttgcttgattatccc 100  Q
    |||||||||||||||||||| |||||||||||||||||| ||||||||  |||||||||||||||| ||||| | |||||| ||||||||||| ||| ||    
T  31425015 ttcttttgtgttctctcttcttttctctctcgctgttttctacttttgacttgtgtttataattgtcccatacattttgttatggttgcttgagtattcc 31424916  T
Q  101 ttactcgacacatcaagtttgttattggtgtgatttttcaacgaattcgctacaatt 157  Q
    || ||| |||||||||||||||||||||||||||||||||  |||||||| ||||||    
T  31424915 ttgctccacacatcaagtttgttattggtgtgatttttcattgaattcgcaacaatt 31424859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 1 - 155
Target Start/End: Complemental strand, 14097969 - 14097814
Alignment:
Q  1 ttcttttgtgttctctcttcctttctctctcgctgttttttacttttgggttgtgtttataattgttccatatactttg-ttttggttgcttgattatcc 99  Q
    |||||||||||||||||||||||||||||||| |||||| ||||||||  |||||||||||||||||||||| |||||| |||||||||||||||||||     
T  14097969 ttcttttgtgttctctcttcctttctctctcgttgttttctacttttgacttgtgtttataattgttccatacactttgattttggttgcttgattatct 14097870  T
Q  100 cttactcgacacatcaagtttgttattggtgtgatttttcaacgaattcgctacaa 155  Q
    ||| ||  ||||||||||||||||||||||||| ||||||  ||||||||| ||||    
T  14097869 cttgcttcacacatcaagtttgttattggtgtgttttttcttcgaattcgcaacaa 14097814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 1 - 148
Target Start/End: Original strand, 17319168 - 17319315
Alignment:
Q  1 ttcttttgtgttctctcttcctttctctctcgctgttttttacttttgggttgtgtttataattgttccatatactttgttttggttgcttgattatccc 100  Q
    |||||||||||||||||||| ||||||||||||| |||| ||||||||| |||||||||||| | ||||||| ||||||||||||||| |||||||| ||    
T  17319168 ttcttttgtgttctctcttcttttctctctcgctattttctacttttggcttgtgtttataactattccatacactttgttttggttgtttgattattcc 17319267  T
Q  101 ttactcgacacatcaagtttgttattggtgtgatttttcaacgaattc 148  Q
    |||||| ||||||||| ||||||||||||| ||||||||| |||||||    
T  17319268 ttactccacacatcaaatttgttattggtgcgatttttcatcgaattc 17319315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 1 - 150
Target Start/End: Complemental strand, 4131375 - 4131225
Alignment:
Q  1 ttcttttgtgttctctcttcctttctctctcgctgttttttacttttgggttgtgtttataattgttccatatactttgttttggttgcttgattatccc 100  Q
    |||||||||||||||| ||| ||||||||||| |||||| || |||||| |||||||||||||||||||||| ||||||||||||||||||||||||| |    
T  4131375 ttcttttgtgttctctgttcttttctctctcgttgttttctatttttggcttgtgtttataattgttccatacactttgttttggttgcttgattatctc 4131276  T
Q  101 ttactcgacacatcaagtttgttattggtgtga-tttttcaacgaattcgc 150  Q
    || |||  ||||||||||||||||||||||||| ||||||| |||||||||    
T  4131275 ttgctccgcacatcaagtttgttattggtgtgagtttttcatcgaattcgc 4131225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 1 - 150
Target Start/End: Original strand, 18307390 - 18307539
Alignment:
Q  1 ttcttttgtgttctctcttcctttctctctcgctgttttttacttttgggttgtgtttataattgttccatatactttgttttggttgcttgattatccc 100  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||| |||||||||||||||| | ||||||      
T  18307390 ttcttttgtgttctctcttcctttctctctcgctgttttctacttttggcttgtgtttataattgttccatacactttgttttggttgcctaattatcat 18307489  T
Q  101 ttactcgacacatcaagtttgttattggtgtgatttttcaacgaattcgc 150  Q
    || ||| |||||||||||||||||||| |||  ||| ||| |||||||||    
T  18307490 ttgctccacacatcaagtttgttattgatgtattttctcatcgaattcgc 18307539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 1 - 155
Target Start/End: Original strand, 31490193 - 31490346
Alignment:
Q  1 ttcttttgtgttctctcttcctttctctctcgctgttttttacttttgggttgtgtttataattgttccatatactttgttttggttgcttgattatccc 100  Q
    |||||||||||||||||||  |||||||||| ||||||| ||||||||  ||||||||||||||||| |||| ||||| ||||||||||||||||||| |    
T  31490193 ttcttttgtgttctctcttattttctctctccctgttttctacttttgacttgtgtttataattgtttcatacactttattttggttgcttgattatctc 31490292  T
Q  101 ttactcgacacatcaagtttgttattggtgtgatttttcaacgaattcgctacaa 155  Q
    || ||| |||||||||||||| |||||||||||||||||| ||||||||| ||||    
T  31490293 ttgctccacacatcaagtttg-tattggtgtgatttttcatcgaattcgcaacaa 31490346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 24 - 157
Target Start/End: Complemental strand, 50078766 - 50078632
Alignment:
Q  24 tctctctcgctgttttttacttttgggttgtgtttataattgttccatatactttgttttggttgcttgattatcccttactcgacacatcaagtttgtt 123  Q
    ||||||||| |||||| ||||||||| |||||||||||||||||||||| |||||||||||||||||||||||| |||| ||| ||||||||||||||||    
T  50078766 tctctctcgttgttttctacttttggcttgtgtttataattgttccatacactttgttttggttgcttgattattccttgctccacacatcaagtttgtt 50078667  T
Q  124 attggtgtgatttt-tcaacgaattcgctacaatt 157  Q
    |||||||||||||| ||| ||||||||| ||||||    
T  50078666 attggtgtgattttctcatcgaattcgcaacaatt 50078632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 1 - 155
Target Start/End: Complemental strand, 6995700 - 6995539
Alignment:
Q  1 ttcttttgtgttctctcttc----ctttctctctcgctgtttttt---acttttgggttgtgtttataattgttccatatactttgttttggttgcttga 93  Q
    ||||||||||||||||||||    |||| |||||||||||| |||   |||||||| ||||||||||| |||||||||| ||||||||||| ||||||||    
T  6995700 ttcttttgtgttctctcttctcttctttttctctcgctgttgttttctacttttggcttgtgtttatagttgttccatacactttgttttgattgcttga 6995601  T
Q  94 ttatcccttactcgacacatcaagtttgttattggtgtgatttttcaacgaattcgctacaa 155  Q
     |||||||| ||| ||||||||||||||||||||||||||||||||| ||||||||| ||||    
T  6995600 ctatcccttgctccacacatcaagtttgttattggtgtgatttttcatcgaattcgcaacaa 6995539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 1 - 150
Target Start/End: Original strand, 47906551 - 47906700
Alignment:
Q  1 ttcttttgtgttctctcttcctttctctctc-gctgttttttacttttgggttgtgtttataattgttccatatactttgttttggttgcttgattatcc 99  Q
    |||||||||||||||||||| |||||||| | | |||||| ||||||||| ||||| |||||||||||||||| |||||| ||||||||||||||||||     
T  47906551 ttcttttgtgttctctcttcttttctctcgctgttgttttctacttttggcttgtgattataattgttccatacactttggtttggttgcttgattatct 47906650  T
Q  100 cttactcgacacatcaagtttgttattggtgtgatttttcaacgaattcgc 150  Q
    ||| ||| |||||||||| |||||||||||||||||||||| |||||||||    
T  47906651 cttgctccacacatcaag-ttgttattggtgtgatttttcatcgaattcgc 47906700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 1 - 148
Target Start/End: Complemental strand, 9241085 - 9240940
Alignment:
Q  1 ttcttttgtgttctctcttcctttctctctcgctgttttttacttttgggttgtgtttataattgttccatatactttgttttggttgcttgattatccc 100  Q
    ||||||| ||||||||||| |||||||||  |||||||| ||||||||| |||| |||||||||||| |||| ||||||||||||||||||||||||| |    
T  9241085 ttcttttttgttctctctttctttctctc--gctgttttctacttttggtttgtatttataattgtttcatacactttgttttggttgcttgattatcac 9240988  T
Q  101 ttactcgacacatcaagtttgttattggtgtgatttttcaacgaattc 148  Q
    || ||| |||| |||||||||||||||||||||||||| | |||||||    
T  9240987 ttgctccacacttcaagtttgttattggtgtgattttttatcgaattc 9240940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 1 - 139
Target Start/End: Complemental strand, 27336940 - 27336799
Alignment:
Q  1 ttcttttgtgttctctcttcctttctctctcgctgtttttt---acttttgggttgtgtttataattgttccatatactttg-ttttggttgcttgatta 96  Q
    |||||||||||||||||||||||| |||||||||||| |||   |||||||| |||||||||||||||||||||| |||||| |||||||||| ||||||    
T  27336940 ttcttttgtgttctctcttccttt-tctctcgctgttgttttctacttttggcttgtgtttataattgttccatacactttgattttggttgcctgatta 27336842  T
Q  97 tcccttactcgacacatcaagtttgttattggtgtgatttttc 139  Q
    |||||| ||| |||||||||||||||||||| |||||||||||    
T  27336841 tcccttgctccacacatcaagtttgttattgatgtgatttttc 27336799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 1 - 148
Target Start/End: Complemental strand, 25248551 - 25248404
Alignment:
Q  1 ttcttttgtgttctctcttcctttctctctcgctgttttttacttttgggttgtgtttataattgttccatatactttgttttggttgcttgattatccc 100  Q
    |||||||||||| | ||||||  | |||||||||||||| ||||||||  || |||||||||||||| |||| |||||||||||||||||||| ||| ||    
T  25248551 ttcttttgtgttttatcttccggtgtctctcgctgttttctacttttgacttttgtttataattgtttcatacactttgttttggttgcttgactattcc 25248452  T
Q  101 ttactcgacacatcaagtttgttattggtgtgatttttcaacgaattc 148  Q
    |||||| |||||||||||||||||||| |||||||||||| |||||||    
T  25248451 ttactccacacatcaagtttgttattgttgtgatttttcatcgaattc 25248404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 1 - 150
Target Start/End: Original strand, 39462800 - 39462952
Alignment:
Q  1 ttcttttgtgttctctcttcctttctctctcgctgttttttact---tttgggttgtgtttataattgttccatatactttg-ttttggttgcttgatta 96  Q
    |||||||||||||||||||| ||| |||||||||||| ||| ||   ||||| |||||||||||||||||||||| |||||| ||||| |||| ||||||    
T  39462800 ttcttttgtgttctctcttctttt-tctctcgctgttgttttctaattttggcttgtgtttataattgttccatacactttgattttgattgcctgatta 39462898  T
Q  97 tcccttactcgacacatcaagtttgttattggtgtgatttttcaacgaattcgc 150  Q
    |||||| ||| ||||||||||||||||||||||||||||||||| |||||||||    
T  39462899 tcccttgctccacacatcaagtttgttattggtgtgatttttcatcgaattcgc 39462952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 1 - 138
Target Start/End: Complemental strand, 12302505 - 12302367
Alignment:
Q  1 ttcttttgtgttctctcttcctttctctctcgctgttttttacttttgggttgtgtttataattgttccatatactttg-ttttggttgcttgattatcc 99  Q
    |||||||||||||||||||| ||||||||||| |||||| ||||||||  |||||||||||||||||||||| |||||| |||||||| | ||||||||     
T  12302505 ttcttttgtgttctctcttcttttctctctcgttgttttctacttttgacttgtgtttataattgttccatacactttgattttggtttcctgattatca 12302406  T
Q  100 cttactcgacacatcaagtttgttattggtgtgattttt 138  Q
    ||| ||| ||||||||||||||||||||||||| |||||    
T  12302405 cttgctccacacatcaagtttgttattggtgtgtttttt 12302367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 1 - 157
Target Start/End: Complemental strand, 27339131 - 27338970
Alignment:
Q  1 ttcttttgtgttctctcttcctttctctctcgctgtttttt---acttttgggttgtgtttataattgttccatatactttg-ttttggttgcttgatta 96  Q
    |||||||||||||||||||||||| |||||||||||| |||   |||||||| |||||||||||||||||||||| |||||| |||||||||| ||||||    
T  27339131 ttcttttgtgttctctcttccttt-tctctcgctgttgttttctacttttggcttgtgtttataattgttccatacactttgattttggttgcctgatta 27339033  T
Q  97 tcccttactcgacacatcaagtttgttattggtgtgatttt--tcaacgaattcgctacaatt 157  Q
    ||||||  || |||||||||||||||||||| |||||||||  ||||||||||| | ||||||    
T  27339032 tcccttgttccacacatcaagtttgttattgatgtgatttttctcaacgaattcacaacaatt 27338970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 12 - 148
Target Start/End: Complemental strand, 3579572 - 3579437
Alignment:
Q  12 tctctcttcctttctctctcgctgttttttacttttgggttgtgtttataattgttccatatactttgttttggttgcttgattatcccttactcgacac 111  Q
    ||||||| ||| |||||||| ||||||| ||||||||| |||||||||||||||||||||| ||||| |||||||||| |||||||| ||| ||| ||||    
T  3579572 tctctctccctctctctctctctgttttctacttttggcttgtgtttataattgttccatacactttattttggttgcctgattatcacttgctccacac 3579473  T
Q  112 atcaagtttgttattggtgtgatttttcaacgaattc 148  Q
    ||||||||||||||||||||| ||||||| |||||||    
T  3579472 atcaagtttgttattggtgtg-tttttcatcgaattc 3579437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 1 - 157
Target Start/End: Original strand, 16429239 - 16429390
Alignment:
Q  1 ttcttttgtgttctctcttcctttctctctcgctgttttttacttttgggttgtgtttataattgttccatatactttgttttggttgcttgattatccc 100  Q
    |||||||||||||||||||| ||||||||  ||||||||  |||||||| |||||||||||| |  |||||| |||||||||||||||| |||||||| |    
T  16429239 ttcttttgtgttctctcttcttttctctc--gctgttttc-acttttggtttgtgtttataact--tccatacactttgttttggttgcctgattatcac 16429333  T
Q  101 ttactcgacacatcaagtttgttattggtgtgatttttcaacgaattcgctacaatt 157  Q
    || ||| ||||||||||||||||||||||||||||||||| ||||||| | ||||||    
T  16429334 ttgctccacacatcaagtttgttattggtgtgatttttcatcgaattcacaacaatt 16429390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 1 - 157
Target Start/End: Complemental strand, 28207068 - 28206909
Alignment:
Q  1 ttcttttgtgttctctcttcctttctctctcgctgtttttt---acttttgggttgtgtttataattgttccatatactttg-ttttggttgcttgatta 96  Q
    |||||||||||||||||||| ||| |||||||||||| |||   |||||||| |||||||||||||||||||||| |||||| |||||||||| ||||||    
T  28207068 ttcttttgtgttctctcttctttt-tctctcgctgttgttttctacttttggcttgtgtttataattgttccatacactttgattttggttgcctgatta 28206970  T
Q  97 tcccttactcgacacatcaagtttgttattggtgtgatttttcaacgaattcgctacaatt 157  Q
    || ||| ||| ||||||||||||||||||||||||| ||| ||| ||||||| | ||||||    
T  28206969 tcacttgctccacacatcaagtttgttattggtgtgttttctcatcgaattcacaacaatt 28206909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 13 - 140
Target Start/End: Original strand, 47451922 - 47452051
Alignment:
Q  13 ctctcttcctttctctctcgctgtt---ttttacttttgggttgtgtttataattgttccatatactttgttttggttgcttgattatcccttactcgac 109  Q
    |||||||||||| ||||||| ||||   || ||||||||| |||||||||||||||||||||| |||||||||||||||||||| |||||||| ||||||    
T  47451922 ctctcttccttt-tctctcgttgttgctttctacttttggcttgtgtttataattgttccatacactttgttttggttgcttgactatcccttgctcgac 47452020  T
Q  110 acatcaagtttgttattggtgtgatttttca 140  Q
    ||||||| |||||||||| ||||||||||||    
T  47452021 acatcaaatttgttattgatgtgatttttca 47452051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 150
Target Start/End: Original strand, 23816167 - 23816319
Alignment:
Q  1 ttcttttgtgttctctcttcct-ttctctctcgctgtttttt---acttttgggttgtgtttataattgttccatatactttgttttggttgcttgatta 96  Q
    |||||||||||||||||||  | || |||||||||||| |||   |||||||  ||||| |||||||||||||||| |||||||||||||||||||||||    
T  23816167 ttcttttgtgttctctctttttcttttctctcgctgttgttttctacttttgacttgtgattataattgttccatacactttgttttggttgcttgatta 23816266  T
Q  97 tcccttactcgacacatcaagtttgttattggtgtgatttttcaacgaattcgc 150  Q
    | |||| ||| |||||||||| |||||||||||||||||||||| |||||||||    
T  23816267 ttccttgctccacacatcaag-ttgttattggtgtgatttttcatcgaattcgc 23816319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 150
Target Start/End: Complemental strand, 31422860 - 31422710
Alignment:
Q  1 ttcttttgtgttctctcttcctttctctctcgctgttttttacttttgggttgtgttt-ataattgttccatatactttgttttggttgcttgattatcc 99  Q
    |||||||||| | ||||||| |||||||||||||||||| ||||||||  |||||||| |||||| |||| || ||||| |||| |||| |||||||| |    
T  31422860 ttcttttgtgatatctcttcttttctctctcgctgttttctacttttgacttgtgttttataattattccgtacactttattttagttgattgattattc 31422761  T
Q  100 cttactcgacacatcaagtttgttattggtgtgatttttcaacgaattcgc 150  Q
    ||| ||| |||||||||||||||||||| |||||||||||| |||||||||    
T  31422760 cttgctccacacatcaagtttgttattgatgtgatttttcatcgaattcgc 31422710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 4 - 148
Target Start/End: Complemental strand, 50307542 - 50307395
Alignment:
Q  4 ttttgtgttctctcttcctttctctctcgctgtttttt---acttttgggttgtgtttataattgttccatatactttg-ttttggttgcttgattatcc 99  Q
    ||||||||||||||||  ||| |||||||||||| |||   |||||||| |||||||||||||||||||||| |||||| |||||||||| |||||||||    
T  50307542 ttttgtgttctctcttatttt-tctctcgctgttgttttctacttttggcttgtgtttataattgttccatacactttgattttggttgcctgattatcc 50307444  T
Q  100 cttactcgacacatcaagtttgttattggtgtgatttttcaacgaattc 148  Q
    ||| ||| | ||||||||||| ||||||||||||||||||| |||||||    
T  50307443 cttgctccagacatcaagtttattattggtgtgatttttcatcgaattc 50307395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 147
Target Start/End: Original strand, 15823827 - 15823977
Alignment:
Q  1 ttcttttgtgttctctcttcctttctctctcgctgtttttt---acttttgggttgtgtttataattgttccatatactttg-ttttggttgcttgatta 96  Q
    |||||||||||||||||||| ||| ||||| | |||| |||   |||||||  ||||| |||||||||||||||| |||||| |||||||||| ||||||    
T  15823827 ttcttttgtgttctctcttcttttttctcttgttgttgttttctacttttgccttgtgattataattgttccatacactttgattttggttgcctgatta 15823926  T
Q  97 tcccttactcgacacatcaagtttgttattggtgtgatttttcaacgaatt 147  Q
     ||||||||| ||||||||||||||||||||||||||||||| || |||||    
T  15823927 ccccttactccacacatcaagtttgttattggtgtgatttttaaaggaatt 15823977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 148
Target Start/End: Original strand, 41647201 - 41647349
Alignment:
Q  1 ttcttttgtgttctctcttcctttctctctcgctgttttttacttttgggttgtgtttataattgttccatatactttg-ttttggttgcttgattatcc 99  Q
    |||| ||||||||||||||||||||||||| |||||||| ||||||||  |||||||||||||| || |||| |||||| |||||||||  ||||||||     
T  41647201 ttctcttgtgttctctcttcctttctctcttgctgttttctacttttgacttgtgtttataattatttcatacactttgattttggttgtctgattatca 41647300  T
Q  100 cttactcgacacatcaagtttgttattggtgtgatttttcaacgaattc 148  Q
    ||| |||  |||||||||||||||||||||||| ||| ||| |||||||    
T  41647301 cttgctccgcacatcaagtttgttattggtgtgttttctcatcgaattc 41647349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 36 - 148
Target Start/End: Original strand, 39932398 - 39932508
Alignment:
Q  36 ttttttacttttgggttgtgtttataattgttccatatactttgttttggttgcttgattatcccttactcgacacatcaagtttgttattggtgtgatt 135  Q
    |||| ||||||||| |||| ||||||| |  |||||| ||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||    
T  39932398 ttttctacttttggcttgtatttataact--tccatacactttgttttggttgcttgattatcccttgctccacacatcaagtttgttattggtgtgatt 39932495  T
Q  136 tttcaacgaattc 148  Q
    ||||| |||||||    
T  39932496 tttcatcgaattc 39932508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 35 - 148
Target Start/End: Original strand, 30780361 - 30780476
Alignment:
Q  35 gttttttacttttgggttgtgtttataattgttccatatactttgttttggttgcttgattatcccttactc--gacacatcaagtttgttattggtgtg 132  Q
    ||||| ||||||||  ||||||||||||||||| |||| |||||||||||||||||||||||| ||||||||   |||||||||||||||||||||||||    
T  30780361 gttttctacttttgatttgtgtttataattgtttcatacactttgttttggttgcttgattattccttactccacacacatcaagtttgttattggtgtg 30780460  T
Q  133 atttttcaacgaattc 148  Q
    | |||||| |||||||    
T  30780461 agttttcatcgaattc 30780476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 11 - 130
Target Start/End: Original strand, 17324365 - 17324484
Alignment:
Q  11 ttctctcttcctttctctctcgctgttttttacttttgggttgtgtttataattgttccatatactttgttttggttgcttgattatcccttactcgaca 110  Q
    ||||||||  || |||||||| ||||||| ||||||||| |||||||||||||| || |||| |||||||| ||||||||||||||| |||| ||| |||    
T  17324365 ttctctctctctctctctctcactgttttctacttttggcttgtgtttataattttttcatacactttgttatggttgcttgattattccttgctccaca 17324464  T
Q  111 catcaagtttgttattggtg 130  Q
    ||||||||||||||||||||    
T  17324465 catcaagtttgttattggtg 17324484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 132
Target Start/End: Complemental strand, 38925481 - 38925350
Alignment:
Q  1 ttcttttgtgttctctcttcctttctctctcgctgttttttacttttgggttgtgtttataattgttccatatactttg--ttttggttgcttgattatc 98  Q
    |||||||||||||||||||| ||||||||    |||||| ||||||||| |||||||||||| ||||||||| ||||||  |||||||||| ||||||||    
T  38925481 ttcttttgtgttctctcttcttttctctcat--tgttttctacttttggcttgtgtttataaatgttccatacactttgatttttggttgcctgattatc 38925384  T
Q  99 ccttactcgacacatcaagtttgttattggtgtg 132  Q
     ||||||| ||||||||||||| |||||||||||    
T  38925383 acttactccacacatcaagtttattattggtgtg 38925350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 1 - 148
Target Start/End: Complemental strand, 17324636 - 17324484
Alignment:
Q  1 ttcttttgtgttctctcttcctttct---ctctcgctgttttttacttt-tgggttgtgtttataattgttccatatactttgttttggttgcttgatta 96  Q
    ||||||||||||||||||||  ||||   ||||||||||||| |||||| ||| || || |||||||||||| ||  |||||||| ||| ||||||| ||    
T  17324636 ttcttttgtgttctctcttctcttcttttctctcgctgttttctactttctggcttatgattataattgttctattcactttgttatggctgcttgacta 17324537  T
Q  97 tcccttactcgacacatcaagtttgttattggtgtga-tttttcaacgaattc 148  Q
    |||||||||| |||||||||||||||||||||||||| ||||||| |||||||    
T  17324536 tcccttactccacacatcaagtttgttattggtgtgagtttttcatcgaattc 17324484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 34 - 150
Target Start/End: Original strand, 13762157 - 13762271
Alignment:
Q  34 tgttttttacttttgggttgtgtttataattgttccatatactttgttttggttgcttgattatcccttactcgacacatcaagtttgttattggtgtga 133  Q
    |||||| ||||||||| |||| ||||  ||||||||||| ||||||||||||||||||||||||||||| ||| |||||||||| |||||||||||||||    
T  13762157 tgttttctacttttggcttgtattta--attgttccatacactttgttttggttgcttgattatccctttctccacacatcaag-ttgttattggtgtga 13762253  T
Q  134 tttt-tcaacgaattcgc 150  Q
    |||| ||| |||||||||    
T  13762254 ttttctcatcgaattcgc 13762271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 34 - 155
Target Start/End: Original strand, 51750360 - 51750477
Alignment:
Q  34 tgttttttacttttgggttgtgtttataattgttccatatactttgttttggttgcttgattatcccttactcgacacatcaagtttgttattggtgtga 133  Q
    |||||| ||||||||| |||| ||||  ||||||||||| ||||||||||||||||||||||||||||| ||| |||||||||| |||||||||||||||    
T  51750360 tgttttctacttttggcttgtattta--attgttccatacactttgttttggttgcttgattatcccttgctccacacatcaag-ttgttattggtgtga 51750456  T
Q  134 tttttcaacgaattcgctacaa 155  Q
    ||||| | ||||||||| ||||    
T  51750457 ttttt-atcgaattcgcaacaa 51750477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 1 - 140
Target Start/End: Complemental strand, 17186127 - 17185993
Alignment:
Q  1 ttcttttgtgttctctcttcctttctctctcgctgttttttacttttgggttgtgtttataattgttccatatactttgttttggttgcttgattatccc 100  Q
    ||||||||||||||||||| |||||||||  |||||||| ||||||||  ||||| |||||| |  |||||| |||||||||||||||||||| |||| |    
T  17186127 ttcttttgtgttctctctttctttctctc--gctgttttctacttttgt-ttgtgattataact--tccatacactttgttttggttgcttgactatcac 17186033  T
Q  101 ttactcgacacatcaagtttgttattggtgtgatttttca 140  Q
    || ||| ||| ||||||||| |||||||||||||||||||    
T  17186032 ttgctccacatatcaagtttattattggtgtgatttttca 17185993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 60 - 148
Target Start/End: Original strand, 24326008 - 24326095
Alignment:
Q  60 taattgttccatatactttgttttggttgcttgattatcccttactcgacacatcaagtttgttattggtgtgatttttcaacgaattc 148  Q
    ||||||||||||| |||||  |||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||| |||||||    
T  24326008 taattgttccatacactttactttggttgcttgattatcccttactccacacatcaag-ttgttattggtgtgatttttcatcgaattc 24326095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 61 - 157
Target Start/End: Original strand, 51757881 - 51757976
Alignment:
Q  61 aattgttccatatactttgttttggttgcttgattatcccttactcgacacatcaagtttgttattggtgtgatttttcaacgaattcgctacaatt 157  Q
    |||||||||||| ||||||||||||||||||||||||||||| ||| |||||||||| ||||||||||||| |||||||| ||||||| | ||||||    
T  51757881 aattgttccatacactttgttttggttgcttgattatcccttgctccacacatcaag-ttgttattggtgtcatttttcatcgaattcacaacaatt 51757976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 34 - 148
Target Start/End: Complemental strand, 9459394 - 9459283
Alignment:
Q  34 tgttttttacttttgggttgtgtttataattgttccatatactttgttttggttgcttgattatcccttactcgacacatcaagtttgttattggtgtga 133  Q
    |||||| ||||||||| |||| ||||||| | |  |||| ||||||||||||||||||||||||||||| ||| |||||||||| |||||||||||||||    
T  9459394 tgttttctacttttggcttgtatttataacttt--catacactttgttttggttgcttgattatcccttgctccacacatcaag-ttgttattggtgtga 9459298  T
Q  134 tttttcaacgaattc 148  Q
    ||||||| |||||||    
T  9459297 tttttcatcgaattc 9459283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 34 - 148
Target Start/End: Complemental strand, 9463221 - 9463110
Alignment:
Q  34 tgttttttacttttgggttgtgtttataattgttccatatactttgttttggttgcttgattatcccttactcgacacatcaagtttgttattggtgtga 133  Q
    |||||| ||||||||| |||| ||||||| | |  |||| ||||||||||||||||||||||||||||| ||| |||||||||| |||||||||||||||    
T  9463221 tgttttctacttttggcttgtatttataacttt--catacactttgttttggttgcttgattatcccttgctccacacatcaag-ttgttattggtgtga 9463125  T
Q  134 tttttcaacgaattc 148  Q
    ||||||| |||||||    
T  9463124 tttttcatcgaattc 9463110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 148
Target Start/End: Original strand, 40134226 - 40134372
Alignment:
Q  1 ttcttttgtgttctctcttcctttctctctcgctgttttttacttttgggttgtgtttataattgttccatatactttgttttggttgcttgattat--c 98  Q
    |||||||||||||||| ||| ||| ||||||| |||||| ||||||||| ||| | |||||| |  |||||| |||||||||||||||| |||||||  |    
T  40134226 ttcttttgtgttctctattctttt-tctctcgttgttttctacttttggcttgagattataact--tccatacactttgttttggttgcctgattatatc 40134322  T
Q  99 ccttactcgacacatcaagtttgttattggtgtgatttttcaacgaattc 148  Q
     ||| ||| |||||||||||||||||||| |||||||||||| |||||||    
T  40134323 acttgctccacacatcaagtttgttattgatgtgatttttcatcgaattc 40134372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 34 - 156
Target Start/End: Complemental strand, 46431665 - 46431546
Alignment:
Q  34 tgttttttacttttgggttgtgtttataattgttccatatactttgttttggttgcttgattatcccttactcgacacatcaagtttgttattggtgtga 133  Q
    |||||| ||||||||| |||| ||||  |||||||||||  |||||||||||||||||||||||| ||| ||| | |||||||| |||||||||||||||    
T  46431665 tgttttctacttttggcttgtattta--attgttccatacgctttgttttggttgcttgattatctcttgctccaaacatcaag-ttgttattggtgtga 46431569  T
Q  134 tttttcaacgaattcgctacaat 156  Q
    ||||||| ||||||||| |||||    
T  46431568 tttttcatcgaattcgcaacaat 46431546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 157
Target Start/End: Complemental strand, 28998253 - 28998091
Alignment:
Q  1 ttcttttgtgttctctcttcctttct---ctctcgctgttttttacttttgggttgtgtttataattgttccatatactttg---ttttggttgcttgat 94  Q
    |||||||||||||||||||   ||||   |||||| |||||| ||||||||| |||||||||||||||||||||| ||||||    ||||||||| ||||    
T  28998253 ttcttttgtgttctctcttttcttcttttctctcgttgttttctacttttggcttgtgtttataattgttccatacactttgattctttggttgcctgat 28998154  T
Q  95 tatcccttactcgacacatcaagtttgttattggtgtgatttttcaacgaattcgctacaatt 157  Q
    |||| ||| ||| ||||||||||||||| ||||||||| ||| ||  ||||||| | ||||||    
T  28998153 tatcacttgctccacacatcaagtttgtcattggtgtgttttctcttcgaattcacaacaatt 28998091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 157
Target Start/End: Complemental strand, 29003969 - 29003807
Alignment:
Q  1 ttcttttgtgttctctcttcctttct---ctctcgctgttttttacttttgggttgtgtttataattgttccatatactttg---ttttggttgcttgat 94  Q
    |||||||||||||||||||   ||||   |||||| |||||| ||||||||| |||||||||||||||||||||| ||||||    ||||||||| ||||    
T  29003969 ttcttttgtgttctctcttttcttcttttctctcgttgttttctacttttggcttgtgtttataattgttccatacactttgattctttggttgcctgat 29003870  T
Q  95 tatcccttactcgacacatcaagtttgttattggtgtgatttttcaacgaattcgctacaatt 157  Q
    |||| ||| ||| ||||||||||||||| ||||||||| ||| ||  ||||||| | ||||||    
T  29003869 tatcacttgctccacacatcaagtttgtcattggtgtgttttctcttcgaattcacaacaatt 29003807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 34 - 150
Target Start/End: Complemental strand, 13447233 - 13447121
Alignment:
Q  34 tgttttttacttttgggttgtgtttataattgttccatatactttgttttggttgcttgattatcccttactcgacacatcaagtttgttattggtgtga 133  Q
    |||||| ||||||||| |||| ||||  ||||||||||| ||||||||||||||||||||||||| ||| ||| |||||||||| |||||||||||||||    
T  13447233 tgttttctacttttggcttgtattta--attgttccatacactttgttttggttgcttgattatctcttgctccacacatcaag-ttgttattggtgtga 13447137  T
Q  134 tttttcaacgaattcgc 150  Q
     |||||| |||||||||    
T  13447136 -ttttcatcgaattcgc 13447121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 34 - 137
Target Start/End: Complemental strand, 15294794 - 15294694
Alignment:
Q  34 tgttttttacttttgggttgtgtttataattgttccatatactttgttttggttgcttgattatcccttactcgacacatcaagtttgttattggtgtga 133  Q
    |||||| ||||||||| |||| ||||  ||||||||||| ||||||||||||||||||||||||| ||| ||| |||||||||| |||||||||||||||    
T  15294794 tgttttctacttttggcttgtattta--attgttccatacactttgttttggttgcttgattatctcttgctccacacatcaag-ttgttattggtgtga 15294698  T
Q  134 tttt 137  Q
    ||||    
T  15294697 tttt 15294694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 60 - 148
Target Start/End: Original strand, 23786185 - 23786272
Alignment:
Q  60 taattgttccatatactttgttttggttgcttgattatcccttactcgacacatcaagtttgttattggtgtgatttttcaacgaattc 148  Q
    |||||||||||||  ||||||||||||||||| |||||||||| ||| |||||||||| |||||||||||||||||||||| |||||||    
T  23786185 taattgttccatacgctttgttttggttgcttaattatcccttgctccacacatcaag-ttgttattggtgtgatttttcatcgaattc 23786272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 14 - 137
Target Start/End: Complemental strand, 25860392 - 25860270
Alignment:
Q  14 tctcttcctttctctctcgctgtttttt---acttttgggttgtgtttataattgttccatatactttgttttggttgcttgattatcccttactcgaca 110  Q
    ||||||| ||| |||||||||||| |||   |||||||| |||||||||||||||||||||| ||||||||||||    |||| |||||||| ||| |||    
T  25860392 tctcttcttttttctctcgctgttgttttctacttttggcttgtgtttataattgttccatacactttgttttgg----ttgactatcccttgctccaca 25860297  T
Q  111 catcaagtttgttattggtgtgatttt 137  Q
    ||||||||||| |||||||||| ||||    
T  25860296 catcaagtttgatattggtgtggtttt 25860270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 34 - 155
Target Start/End: Original strand, 28842815 - 28842932
Alignment:
Q  34 tgttttttacttttgggttgtgtttataattgttccatatactttgttttggttgcttgattatcccttactcgacacatcaagtttgttattggtgtga 133  Q
    |||||| ||||||||| |||| ||||||| | |  |||| ||||||||||||||||||||||||||||||||| |||||||||| |||||||| ||||||    
T  28842815 tgttttctacttttggcttgtatttataacttt--catacactttgttttggttgcttgattatcccttactccacacatcaag-ttgttattagtgtga 28842911  T
Q  134 tttttcaacgaattcgctacaa 155  Q
     |||||| ||||||||| ||||    
T  28842912 -ttttcatcgaattcgcaacaa 28842932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 60 - 150
Target Start/End: Complemental strand, 31735458 - 31735369
Alignment:
Q  60 taattgttccatatactttgttttggttgcttgattatcccttactcgacacatcaagtttgttattggtgtgatttttcaacgaattcgc 150  Q
    ||||||||||||| ||||||||||||||||||||||||| ||| ||| |||||||||| ||||||||||||| |||| ||| |||||||||    
T  31735458 taattgttccatacactttgttttggttgcttgattatctcttgctccacacatcaag-ttgttattggtgtaatttctcatcgaattcgc 31735369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 34 - 157
Target Start/End: Original strand, 16226489 - 16226610
Alignment:
Q  34 tgttttttacttttgggttgtgtttataattgttccatatactttg-ttttggttgcttgattatcccttactcgacacatcaagtttgttattggtgtg 132  Q
    |||||| ||||||||| |||| ||||||| | |  |||| |||||| ||||||||||||||||||||||| ||| |||||||||| ||||||||||||||    
T  16226489 tgttttctacttttggcttgtatttataacttt--catacactttgattttggttgcttgattatcccttgctccacacatcaag-ttgttattggtgtg 16226585  T
Q  133 atttttcaacgaattcgctacaatt 157  Q
    |||||||| ||||||| | ||||||    
T  16226586 atttttcatcgaattcacaacaatt 16226610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 140
Target Start/End: Original strand, 25128154 - 25128293
Alignment:
Q  1 ttcttttgtgttctctcttcctttct--ctctcgctgttttttacttttgggttgtgtttataattgttccatatactttg-ttttggttgcttgattat 97  Q
    ||||||||||||||||||||||||||  ||||||||||||| |||||||   ||||| ||||||||| |  ||  |||||| ||||||||||||||||||    
T  25128154 ttcttttgtgttctctcttcctttctttctctcgctgttttctacttttat-ttgtgattataattgct--atccactttgattttggttgcttgattat 25128250  T
Q  98 cccttactcgacacatcaagtttgttattggtgtgatttttca 140  Q
     |||| ||| ||||||||||||||||||||  |||| ||||||    
T  25128251 tccttgctctacacatcaagtttgttattgacgtgagttttca 25128293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 97
Target Start/End: Complemental strand, 50076672 - 50076577
Alignment:
Q  1 ttcttttgtgttctctcttcctttctctctcgctgttttttacttttgggttgtgtttataattgttccatatactttgttttggttgcttgattat 97  Q
    |||||||||||||||||||| ||| ||||||| |||||| |||||||   |||||||||||||||||||||| |||||||||| ||||||| |||||    
T  50076672 ttcttttgtgttctctcttctttt-tctctcgttgttttctacttttaacttgtgtttataattgttccatacactttgttttagttgctttattat 50076577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 34 - 150
Target Start/End: Complemental strand, 10399788 - 10399673
Alignment:
Q  34 tgttttttacttttgggttgtgtttataattgttccatatactttg-ttttggttgcttgattatcccttactcgacacatcaagtttgttattggtgtg 132  Q
    |||||| ||||||||| |||| ||||  ||||||||||| |||||| ||||||||||||||||||| ||| ||| |||||||||| ||||||||||||||    
T  10399788 tgttttctacttttggcttgtattta--attgttccatacactttgattttggttgcttgattatctcttgctccacacatcaag-ttgttattggtgtg 10399692  T
Q  133 at-ttttcaacgaattcgc 150  Q
    || |||||| |||||||||    
T  10399691 atattttcatcgaattcgc 10399673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 28 - 148
Target Start/End: Original strand, 15916697 - 15916815
Alignment:
Q  28 tctcgctgttttt-tacttttgggttgtgtttataattgttccatatactttgttttggttgcttgattatcccttactcgacacatcaagtttgttatt 126  Q
    ||||||||||||| ||||||||| |||||||||||| |  |||||| |||||||||||||||||||||| |  ||| ||| ||||||||||| | |||||    
T  15916697 tctcgctgtttttctacttttggcttgtgtttataact--tccatacactttgttttggttgcttgattgttacttgctccacacatcaagtat-ttatt 15916793  T
Q  127 ggtgtgatttttcaacgaattc 148  Q
    ||||||| |||||| |||||||    
T  15916794 ggtgtgacttttcatcgaattc 15916815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 34 - 157
Target Start/End: Original strand, 2617838 - 2617958
Alignment:
Q  34 tgttttttacttttgggttgtgtttataattgttccatatactttg-ttttggttgcttgattatcccttactcgacacatcaagtttgttattggtgtg 132  Q
    |||||| ||||||||| |||| ||||  ||||||||||| |||||| ||||||||||||||||||||||| ||  |||||||||| ||||||||||||||    
T  2617838 tgttttctacttttggcttgtattta--attgttccatacactttgattttggttgcttgattatcccttgcttcacacatcaag-ttgttattggtgtg 2617934  T
Q  133 atttttcaacgaattcgctacaatt 157  Q
      |||||| ||||||||| ||||||    
T  2617935 -gttttcatcgaattcgcaacaatt 2617958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 34 - 148
Target Start/End: Original strand, 16231884 - 16231996
Alignment:
Q  34 tgttttttacttttgggttgtgtttataattgttccatatactttg-ttttggttgcttgattatcccttactcgacacatcaagtttgttattggtgtg 132  Q
    |||||| ||||||||| |||| ||||||| | |  |||| |||||| |||||||||||||||||||| || ||| |||||||||| ||||||||||||||    
T  16231884 tgttttctacttttggcttgtatttataacttt--catacactttgattttggttgcttgattatccgttgctccacacatcaag-ttgttattggtgtg 16231980  T
Q  133 atttttcaacgaattc 148  Q
    |||||||| |||||||    
T  16231981 atttttcatcgaattc 16231996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 34 - 155
Target Start/End: Original strand, 13358894 - 13359012
Alignment:
Q  34 tgttttttacttttgggttgtgtttataattgttccatatactttg-ttttggttgcttgattatcccttactcgacacatcaagtttgttattggtgtg 132  Q
    |||||| ||||||||| |||| ||||||| | |  |||| |||||| |||||||||||||| |||||||||||| |||||||||| ||||||||||||||    
T  13358894 tgttttctacttttggcttgtatttataacttt--catacactttgattttggttgcttgactatcccttactccacacatcaag-ttgttattggtgtg 13358990  T
Q  133 atttttcaacgaattcgctacaa 155  Q
    | |||||| ||||||||| ||||    
T  13358991 a-ttttcatcgaattcgcaacaa 13359012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 113
Target Start/End: Original strand, 16428935 - 16429043
Alignment:
Q  1 ttcttttgtgttctctcttcctttctctctcgctgttttttacttttgggttgtgtttataattgttccatatactttgttttggttgcttgattatccc 100  Q
    ||||||||||||||||||||  || ||||||| |||||| ||||||||| ||||||||||||   ||| ||| |||||||||||||||| |||||||| |    
T  16428935 ttcttttgtgttctctcttc--ttttctctcgatgttttctacttttggtttgtgtttataa--cttctatacactttgttttggttgcctgattatcac 16429030  T
Q  101 ttactcgacacat 113  Q
    || ||| ||||||    
T  16429031 ttgctccacacat 16429043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 34 - 157
Target Start/End: Original strand, 20291777 - 20291897
Alignment:
Q  34 tgttttttacttttgggttgtgtttataattgttccatatactttg-ttttggttgcttgattatcccttactcgacacatcaagtttgttattggtgtg 132  Q
    |||||| ||||||||| |||| ||||  ||||||||||| || ||| |||||||| |||||||||| ||| ||| |||||||||| ||||||||||||||    
T  20291777 tgttttctacttttggcttgtattta--attgttccatacaccttgattttggttacttgattatctcttgctccacacatcaag-ttgttattggtgtg 20291873  T
Q  133 atttttcaacgaattcgctacaatt 157  Q
    | |||||| ||||||||| ||||||    
T  20291874 a-ttttcatcgaattcgcaacaatt 20291897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 34 - 157
Target Start/End: Original strand, 47177683 - 47177804
Alignment:
Q  34 tgttttttacttttgggttgtgtttataattgttccatatactttg-ttttggttgcttgattatcccttactcgacacatcaagtttgttattggtgtg 132  Q
    |||||| ||||||||| |||| ||||  ||| |||||||  ||||| |||||||||||| |||||||||| ||| |||||||||| ||||||||||||||    
T  47177683 tgttttctacttttggcttgtattta--attattccatacgctttgattttggttgcttaattatcccttgctccacacatcaag-ttgttattggtgtg 47177779  T
Q  133 atttttcaacgaattcgctacaatt 157  Q
    |||||| | ||||||| | ||||||    
T  47177780 atttttgatcgaattcacaacaatt 47177804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 26 - 137
Target Start/End: Complemental strand, 18800548 - 18800439
Alignment:
Q  26 tctctcgctgttttttacttttgggttgtgtttataattgttccatatactttgttttggttgcttgattatcccttactcgacacatcaagtttgttat 125  Q
    ||||||| |||||| ||||||||| |||||||||||| |  |||||| ||||||||||| ||||||||||||   || ||| ||||||||||| | || |    
T  18800548 tctctcgttgttttctacttttggcttgtgtttataact--tccatacactttgttttgattgcttgattattatttgctctacacatcaagtattttgt 18800451  T
Q  126 tggtgtgatttt 137  Q
    ||||||||||||    
T  18800450 tggtgtgatttt 18800439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 54 - 137
Target Start/End: Complemental strand, 2510284 - 2510202
Alignment:
Q  54 tgtttataattgttccatatactttgttttggttgcttgattatcccttactcgacacatcaagtttgttattggtgtgatttt 137  Q
    ||||| ||||||||||||| |||||||||| |||||||||||||| ||| ||  ||| |||||| |||||||||||||||||||    
T  2510284 tgtttttaattgttccatacactttgttttcgttgcttgattatctcttgcttcacatatcaag-ttgttattggtgtgatttt 2510202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 4 - 140
Target Start/End: Complemental strand, 6115099 - 6114967
Alignment:
Q  4 ttttgtgttctctcttcctttctctctcgctgttttttacttttgggttgtgtttataattgttccatatactttgttttggttgcttgattatccctta 103  Q
    ||||||||||||||||| ||||||||  | ||| || ||||||||  |||| ||||||| |  |||||| | ||| ||||||||||||||||||| |||     
T  6115099 ttttgtgttctctcttcttttctctc--gttgtcttctacttttgacttgtatttataact--tccatacattttattttggttgcttgattatcacttt 6115004  T
Q  104 ctcgacacatcaagtttgttattggtgtgatttttca 140  Q
    ||| ||||||||||| | |||  ||||||||||||||    
T  6115003 ctccacacatcaagtatattaccggtgtgatttttca 6114967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 26 - 138
Target Start/End: Complemental strand, 14183579 - 14183470
Alignment:
Q  26 tctctcgctgttttttacttttgggttgtgtttataattgttccatatactttgttttggttgcttgattatcccttactcgacacatcaagtttgttat 125  Q
    ||||||| |||||| | ||||||  |||||||||||| |  |||||| ||||||||||||||||||||||||  ||| ||  ||||||||||| | ||||    
T  14183579 tctctcgttgttttcttcttttgc-ttgtgtttataact--tccatacactttgttttggttgcttgattattacttgcttcacacatcaagtattttat 14183483  T
Q  126 tggtgtgattttt 138  Q
    |||||||||||||    
T  14183482 tggtgtgattttt 14183470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 146
Target Start/End: Original strand, 16432677 - 16432813
Alignment:
Q  1 ttcttttgtgttctctcttcctttctctctcgctgttttttacttttgggttgtgtttataattgttccatatactttgttttggttgcttgattatccc 100  Q
    |||||||||||||||||||| ||||| |       |||| ||||||||| || ||||||||| | |  |||| ||| ||||||| |||| |||||||  |    
T  16432677 ttcttttgtgttctctcttcttttctgt-------ttttctacttttggtttatgtttataacttt--catacactgtgttttgattgcctgattattac 16432767  T
Q  101 ttactcgacacatcaagtttgttattggtgtgatttttcaacgaat 146  Q
    || ||| ||||||||| ||||||||||||||||||||||| |||||    
T  16432768 ttgctccacacatcaaatttgttattggtgtgatttttcatcgaat 16432813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 34 - 148
Target Start/End: Original strand, 47180034 - 47180146
Alignment:
Q  34 tgttttttacttttgggttgtgtttataattgttccatatactttg-ttttggttgcttgattatcccttactcgacacatcaagtttgttattggtgtg 132  Q
    |||||| ||||||||| |||| ||||  ||| |||||||  ||||| ||||| |||||| |||||||||| ||| |||||||||| ||||||||||||||    
T  47180034 tgttttctacttttggcttgtattta--attattccatacgctttgattttgattgcttaattatcccttgctccacacatcaag-ttgttattggtgtg 47180130  T
Q  133 atttttcaacgaattc 148  Q
    |||||| | |||||||    
T  47180131 atttttgatcgaattc 47180146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 61 - 137
Target Start/End: Original strand, 51752715 - 51752789
Alignment:
Q  61 aattgttccatatactttgttttggttgcttgattatcccttactcgacacatcaagtttgttattggtgtgatttt 137  Q
    ||||||| |||| ||||||||||||||||||||||||||||| ||| |||||| ||| || ||||||||||||||||    
T  51752715 aattgtttcatacactttgttttggttgcttgattatcccttgctccacacat-aag-ttattattggtgtgatttt 51752789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 6756809 - 6756877
Alignment:
Q  1 ttcttttgtgttctctcttcctttctctctcgctgttttttacttttgggttgtgtttataattgttccat 71  Q
    ||||||| |||||||||||| |||| ||||||||||||| ||||||||  |||||||||||||||||||||    
T  6756809 ttcttttctgttctctcttc-tttc-ctctcgctgttttctacttttgacttgtgtttataattgttccat 6756877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 34 - 150
Target Start/End: Original strand, 20302762 - 20302875
Alignment:
Q  34 tgttttttacttttgggttgtgtttataattgttccatatactttg-ttttggttgcttgattatcccttactcgacacatcaagtttgttattggtgtg 132  Q
    |||||| ||||||||| |||| ||||  ||||||||||| || ||| |||||||| |||||||||| ||| ||| | |||||||||| ||||||||||||    
T  20302762 tgttttctacttttggcttgtattta--attgttccatacaccttgattttggttacttgattatctcttgctccagacatcaagtt-gttattggtgtg 20302858  T
Q  133 atttttcaacgaattcgc 150  Q
    | |||||| |||||||||    
T  20302859 a-ttttcatcgaattcgc 20302875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 34 - 119
Target Start/End: Original strand, 28841000 - 28841083
Alignment:
Q  34 tgttttttacttttgggttgtgtttataattgttccatatactttgttttggttgcttgattatcccttactcgacacatcaagtt 119  Q
    |||||| ||||||||| |||| ||||||| | |  |||| ||||||||||||||||||||||||||||| ||| || |||||||||    
T  28841000 tgttttctacttttggcttgtatttataacttt--catacactttgttttggttgcttgattatcccttgctccactcatcaagtt 28841083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #74
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 34 - 157
Target Start/End: Complemental strand, 8349020 - 8348902
Alignment:
Q  34 tgttttttacttttgggttgtgtttataattgttccatatactttgttttggttgcttgattatcccttactcgacacatcaagtttgttattggtgtga 133  Q
    |||||| ||||||||  |||||||||||| |  |||||| ||||||||| ||||||||||||||  |||  || |||| |||||||| ||||||||||||    
T  8349020 tgttttctacttttgt-ttgtgtttataact--tccatacactttgttt-ggttgcttgattattacttgttccacacgtcaagttt-ttattggtgtga 8348926  T
Q  134 tttttcaacgaattcgctacaatt 157  Q
    ||||||| ||||||| | ||||||    
T  8348925 tttttcatcgaattcacaacaatt 8348902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #75
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 26 - 137
Target Start/End: Complemental strand, 30790378 - 30790266
Alignment:
Q  26 tctctcgctgt-tttttact--tttgggttgtgtttataattgttccatatactttgttttggttgcttgattatcccttactcgacacatcaagtttgt 122  Q
    ||||||||||| ||||||||  ||| | |||||||||||| |  |||||| ||||||||||||||||||||||||  ||| ||  |||||||| || | |    
T  30790378 tctctcgctgtctttttactatttttgtttgtgtttataact--tccatacactttgttttggttgcttgattattacttgcttcacacatcaggtattt 30790281  T
Q  123 tattggtgtgatttt 137  Q
    |||||||||||||||    
T  30790280 tattggtgtgatttt 30790266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #76
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 77 - 150
Target Start/End: Complemental strand, 13125386 - 13125314
Alignment:
Q  77 ttgttttggttgcttgattatcccttactcgacacatcaagtttgttattggtgtgatttttcaacgaattcgc 150  Q
    |||||||||||||||||||||   || ||| |||||||||||   ||||||||||||||||| |||||||||||    
T  13125386 ttgttttggttgcttgattattt-ttgctccacacatcaagtaatttattggtgtgatttttgaacgaattcgc 13125314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #77
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 6 - 97
Target Start/End: Complemental strand, 15669387 - 15669300
Alignment:
Q  6 ttgtgttctctcttcctttctctctcgctgttttttacttttgggttgtgtttataattgttccatatactttgttttggttgcttgattat 97  Q
    |||||||||||||| |||| ||||||||||| || ||||||||  |||||||||||| |  || ||| ||||||||||| ||||||||||||    
T  15669387 ttgtgttctctctttcttt-tctctcgctgtgttatacttttgt-ttgtgtttataact--tcgatacactttgttttgattgcttgattat 15669300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #78
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 7 - 140
Target Start/End: Complemental strand, 8347266 - 8347140
Alignment:
Q  7 tgtgttctctcttcctttctctctcgctgttttttacttttgggttgtgtttataattgttccatatactttgttttggttgcttgattatcccttactc 106  Q
    ||||||||||||| |||||| ||  |||||||| ||||||||  || ||||||||| | |  |||||||||||||| ||||||||||||||  |||||||    
T  8347266 tgtgttctctctttctttctatc--gctgttttctacttttgc-ttatgtttataacttt--catatactttgttt-ggttgcttgattattacttactc 8347173  T
Q  107 gacacatcaagtttgttattggtgtgatttttca 140  Q
     || |||||||| | ||| | |||||||||||||    
T  8347172 cacgcatcaagtat-ttacttgtgtgatttttca 8347140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #79
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 7 - 61
Target Start/End: Complemental strand, 26520114 - 26520061
Alignment:
Q  7 tgtgttctctcttcctttctctctcgctgttttttacttttgggttgtgtttata 61  Q
    ||||||||||||| |||| |||||||||||||| ||||||| | |||||||||||    
T  26520114 tgtgttctctctttcttt-tctctcgctgttttctacttttagcttgtgtttata 26520061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 114; Significance: 6e-58; HSPs: 92)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 1 - 150
Target Start/End: Complemental strand, 36919582 - 36919433
Alignment:
Q  1 ttcttttgtgttctctcttcctttctctctcgctgttttttacttttgggttgtgtttataattgttccatatactttgttttggttgcttgattatccc 100  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||  |||||||||||||||||||||| ||||| |||||||||| ||||||||||    
T  36919582 ttcttttgtgttctctcttcctttctctctcgctgttttctacttttgacttgtgtttataattgttccatacactttattttggttgcctgattatccc 36919483  T
Q  101 ttactcgacacatcaagtttgttattggtgtgatttttcaacgaattcgc 150  Q
    || ||| ||||||||||||||||||||||||||||||||| |||||||||    
T  36919482 ttgctccacacatcaagtttgttattggtgtgatttttcatcgaattcgc 36919433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 1 - 157
Target Start/End: Complemental strand, 36921491 - 36921335
Alignment:
Q  1 ttcttttgtgttctctcttcctttctctctcgctgttttttacttttgggttgtgtttataattgttccatatactttgttttggttgcttgattatccc 100  Q
    |||||||||||||||||||| ||||||||| |||||||| ||||||||| ||||||||||||||||| |||| ||||| |||||||||| ||||||||||    
T  36921491 ttcttttgtgttctctcttcttttctctcttgctgttttctacttttggcttgtgtttataattgtttcatacactttattttggttgcctgattatccc 36921392  T
Q  101 ttactcgacacatcaagtttgttattggtgtgatttttcaacgaattcgctacaatt 157  Q
    || ||| ||||||||||||||||||||||||||||||||| ||||||||| ||||||    
T  36921391 ttgctccacacatcaagtttgttattggtgtgatttttcatcgaattcgcaacaatt 36921335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 1 - 148
Target Start/End: Original strand, 2891627 - 2891774
Alignment:
Q  1 ttcttttgtgttctctcttcctttctctctcgctgttttttacttttgggttgtgtttataattgttccatatactttgttttggttgcttgattatccc 100  Q
    |||||||||||||||||||||||||||||||| |||||| ||||||||| |||||||||||||||||||||| ||||| |||||||||||||||||| |     
T  2891627 ttcttttgtgttctctcttcctttctctctcgttgttttctacttttggcttgtgtttataattgttccatacactttattttggttgcttgattattct 2891726  T
Q  101 ttactcgacacatcaagtttgttattggtgtgatttttcaacgaattc 148  Q
    || ||| ||||||||||||||||||||||||||||||||| |||||||    
T  2891727 ttgctccacacatcaagtttgttattggtgtgatttttcatcgaattc 2891774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 1 - 150
Target Start/End: Complemental strand, 22800860 - 22800709
Alignment:
Q  1 ttcttttgtgttctctcttcctttctctctcgctgtt---ttttacttttgggttgtgtttataattgttccatatactttgttttggttgcttgattat 97  Q
    |||||||||||||||||||| ||| ||||||||||||   || ||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||    
T  22800860 ttcttttgtgttctctcttctttt-tctctcgctgttgctttctacttttggcttgtgtttataattgttccatatactttgttttggttgcttgactat 22800762  T
Q  98 cccttactcgacacatcaagtttgttattggtgtgatttttcaacgaattcgc 150  Q
    ||||| |||  |||||||||||||||||||||||||||||||| |||||||||    
T  22800761 cccttgctccccacatcaagtttgttattggtgtgatttttcatcgaattcgc 22800709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 1 - 157
Target Start/End: Complemental strand, 22802732 - 22802574
Alignment:
Q  1 ttcttttgtgttctctcttcctttctctctcgctgtt---ttttacttttgggttgtgtttataattgttccatatactttgttttggttgcttgattat 97  Q
    |||||||||||||| ||||| ||| ||||||||||||   || ||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||    
T  22802732 ttcttttgtgttctatcttctttt-tctctcgctgttgctttctacttttggcttgtgtttataattgttccatacactttgttttggttgcttgattat 22802634  T
Q  98 cccttactcgacacatcaagtttgttattggtgtgatttttcaacgaattcgctacaatt 157  Q
    ||||| ||| ||||||||||||||||||||||||||||||||| ||||||| | ||||||    
T  22802633 cccttgctccacacatcaagtttgttattggtgtgatttttcatcgaattcacaacaatt 22802574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 26 - 155
Target Start/End: Original strand, 49088916 - 49089045
Alignment:
Q  26 tctctcgctgttttttacttttgggttgtgtttataattgttccatatactttgttttggttgcttgattatcccttactcgacacatcaagtttgttat 125  Q
    ||||||| |||||| ||||||||| |||||||||||||||||||||| |||||||||||||||||||| |||||||||||| ||||||||||||||||||    
T  49088916 tctctcgttgttttctacttttggcttgtgtttataattgttccatacactttgttttggttgcttgactatcccttactcaacacatcaagtttgttat 49089015  T
Q  126 tggtgtgatttttcaacgaattcgctacaa 155  Q
    ||||||||||||||| ||||||||| ||||    
T  49089016 tggtgtgatttttcatcgaattcgcaacaa 49089045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 22 - 157
Target Start/End: Complemental strand, 14789405 - 14789270
Alignment:
Q  22 tttctctctcgctgttttttacttttgggttgtgtttataattgttccatatactttgttttggttgcttgattatcccttactcgacacatcaagtttg 121  Q
    ||||||||| | |||||| ||||||||| ||||||||||||||||| |||| ||||||||||||||||||||||||||||| ||| ||||||||||||||    
T  14789405 tttctctctagttgttttctacttttggcttgtgtttataattgtttcatacactttgttttggttgcttgattatcccttgctccacacatcaagtttg 14789306  T
Q  122 ttattggtgtgatttttcaacgaattcgctacaatt 157  Q
    ||||||||||||||||||| ||||||||| ||||||    
T  14789305 ttattggtgtgatttttcatcgaattcgcaacaatt 14789270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 1 - 150
Target Start/End: Complemental strand, 38928175 - 38928028
Alignment:
Q  1 ttcttttgtgttctctcttcctttctctctcgctgttttttacttttgggttgtgtttataattgttccatatactttgttttggttgcttgattatccc 100  Q
    |||||||||||||||||||| ||| ||||  | |||||| ||||||||| ||||| |||||| ||||||||| |||||||||||||||||||||||||||    
T  38928175 ttcttttgtgttctctcttcttttatctc--gttgttttctacttttggcttgtgattataactgttccatacactttgttttggttgcttgattatccc 38928078  T
Q  101 ttactcgacacatcaagtttgttattggtgtgatttttcaacgaattcgc 150  Q
    || ||| ||||||||||||||||||||||||||||||||| |||||||||    
T  38928077 ttgctccacacatcaagtttgttattggtgtgatttttcatcgaattcgc 38928028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 1 - 137
Target Start/End: Original strand, 47563096 - 47563230
Alignment:
Q  1 ttcttttgtgttctctcttcctttctctctcgctgttttttacttttgggttgtgtttataattgttccatatactttgttttggttgcttgattatccc 100  Q
    |||||||||||||||||||||||||||  |||||||||| ||||||||| || ||||||||||||||||||| |||||||||||||||||||||||| ||    
T  47563096 ttcttttgtgttctctcttcctttctc--tcgctgttttctacttttggcttatgtttataattgttccatacactttgttttggttgcttgattattcc 47563193  T
Q  101 ttactcgacacatcaagtttgttattggtgtgatttt 137  Q
    || ||| ||||||||||||||||||||||||| ||||    
T  47563194 ttgctccacacatcaagtttgttattggtgtggtttt 47563230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 22 - 150
Target Start/End: Complemental strand, 14787406 - 14787278
Alignment:
Q  22 tttctctctcgctgttttttacttttgggttgtgtttataattgttccatatactttgttttggttgcttgattatcccttactcgacacatcaagtttg 121  Q
    ||||||||| | |||||| ||||||||| ||||||||||||||||| |||| ||||||||||||||||||||||||||||| ||| ||||||||||||||    
T  14787406 tttctctctagttgttttctacttttggcttgtgtttataattgtttcatacactttgttttggttgcttgattatcccttgctccacacatcaagtttg 14787307  T
Q  122 ttattggtgtgatttttcaacgaattcgc 150  Q
    ||||||||||||||||||| |||||||||    
T  14787306 ttattggtgtgatttttcatcgaattcgc 14787278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 1 - 155
Target Start/End: Complemental strand, 40091413 - 40091258
Alignment:
Q  1 ttcttttgtgttctctcttcctttctctctcgctgttttttacttttgggttgtgtttataattgttccatatactttgttttggttgcttgattatccc 100  Q
    |||||||||||||||||||| ||||||||| ||| |||| ||||||||| |||||||||||||| ||||||| ||||| |||||||||||||||||||      
T  40091413 ttcttttgtgttctctcttcttttctctcttgctattttctacttttggcttgtgtttataattattccatacactttattttggttgcttgattatctt 40091314  T
Q  101 ttactcgacacatcaagtttgttattggtgtg-atttttcaacgaattcgctacaa 155  Q
    || ||| ||||||||||||||||||||||||| |||||||| ||||||||| ||||    
T  40091313 ttgctccacacatcaagtttgttattggtgtgaatttttcatcgaattcgcaacaa 40091258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 1 - 138
Target Start/End: Original strand, 6133172 - 6133309
Alignment:
Q  1 ttcttttgtgttctctcttcctttctctctcgctgttttttacttttgggttgtgtttataattgttccatatactttgttttggttgcttgattatccc 100  Q
    |||||||||||||||||||| ||||||||||| |||||| ||||||||  ||||||||||||||||| |||| ||||||||| |||||||||||||| ||    
T  6133172 ttcttttgtgttctctcttcttttctctctcgttgttttctacttttgacttgtgtttataattgtttcatacactttgtttcggttgcttgattattcc 6133271  T
Q  101 ttactcgacacatcaagtttgttattggtgtgattttt 138  Q
    || ||| |||||||||||||||||||||||| ||||||    
T  6133272 ttgctccacacatcaagtttgttattggtgtaattttt 6133309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 1 - 148
Target Start/End: Complemental strand, 24446652 - 24446508
Alignment:
Q  1 ttcttttgtgttctctcttcctttctctctcgctgttttttacttttgggttgtgtttataattgttccatatactttgttttggttgcttgattatccc 100  Q
    |||||||||||||||||||| |||||||||   |||||| ||||||||| |||||||||||||| ||||||| ||||| |||||||||||||||||||||    
T  24446652 ttcttttgtgttctctcttcttttctctct---tgttttctacttttggcttgtgtttataatttttccatacactttattttggttgcttgattatccc 24446556  T
Q  101 ttactcgacacatcaagtttgttattggtgtgatttttcaacgaattc 148  Q
    |||||  ||||||||||||||||||||||||| ||| ||| |||||||    
T  24446555 ttacttcacacatcaagtttgttattggtgtgttttctcatcgaattc 24446508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 1 - 148
Target Start/End: Original strand, 27499377 - 27499530
Alignment:
Q  1 ttcttttgtgttctctcttcctttctctctcgct------gttttttacttttgggttgtgtttataattgttccatatactttgttttggttgcttgat 94  Q
    ||||||||||||||||||||||||||||||| ||      ||||| ||||||||  |||||||||||||||||||||| ||||||||||||||||||| |    
T  27499377 ttcttttgtgttctctcttcctttctctctctctctcgttgttttctacttttgacttgtgtttataattgttccataaactttgttttggttgcttggt 27499476  T
Q  95 tatcccttactcgacacatcaagtttgttattggtgtgatttttcaacgaattc 148  Q
    ||| | || ||| ||||||||||||||||||||||||||||||||| |||||||    
T  27499477 tattcattgctccacacatcaagtttgttattggtgtgatttttcatcgaattc 27499530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 1 - 157
Target Start/End: Original strand, 16453645 - 16453799
Alignment:
Q  1 ttcttttgtgttctctcttcctttctctctcgctgttttttacttttgggttgtgtttataattgttccatatactttgttttggttgcttgattatccc 100  Q
    |||||||||||||||||||| |||||||| |  |||||| ||||||||| ||||| |||||| |||| |||| |||||||||||||||| |||||||| |    
T  16453645 ttcttttgtgttctctcttcttttctctcac--tgttttctacttttggcttgtgattataactgtttcatacactttgttttggttgcctgattatcac 16453742  T
Q  101 ttactcgacacatcaagtttgttattggtgtgatttttcaacgaattcgctacaatt 157  Q
    || ||| ||||||||||||||||||||||||||||||||| ||||||| | ||||||    
T  16453743 ttgctccacacatcaagtttgttattggtgtgatttttcatcgaattcacaacaatt 16453799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 1 - 150
Target Start/End: Complemental strand, 33415486 - 33415338
Alignment:
Q  1 ttcttttgtgttctctcttcctttctctctcgctgttttttacttttgggttgtgtttataattgttccatatactttg-ttttggttgcttgattatcc 99  Q
    |||||||||||||||||||| ||||||||  |||||||| ||||||||| |||||||||||||||| ||||| |||||| |||||||||||||| |||||    
T  33415486 ttcttttgtgttctctcttcttttctctc--gctgttttctacttttggcttgtgtttataattgtcccatacactttgattttggttgcttgactatcc 33415389  T
Q  100 cttactcgacacatcaagtttgttattggtgtgatttttcaacgaattcgc 150  Q
    ||| ||| ||||||||||||||||||| ||||||||| ||| || ||||||    
T  33415388 cttgctccacacatcaagtttgttatttgtgtgatttctcatcggattcgc 33415338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 26 - 150
Target Start/End: Complemental strand, 37313052 - 37312928
Alignment:
Q  26 tctctcgctgttttttacttttgggttgtgtttataattgttccatatactttgttttggttgcttgattatcccttactcgacacatcaagtttgttat 125  Q
    |||||||||||||| ||||||||| || || ||||||||||| |||| |||||||||||||||||||| |||||||| ||| ||||||||||||| ||||    
T  37313052 tctctcgctgttttctacttttggcttatgattataattgtttcatacactttgttttggttgcttgactatcccttgctccacacatcaagtttattat 37312953  T
Q  126 tggtgtgatttttcaacgaattcgc 150  Q
    ||||||||||||||| | |||||||    
T  37312952 tggtgtgatttttcatcaaattcgc 37312928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 2 - 132
Target Start/End: Complemental strand, 12395842 - 12395712
Alignment:
Q  2 tcttttgtgttctctcttcctttctctctcgctgttttttacttttgggttgtgtttataattgttccatatactttgttttggttgcttgattatccct 101  Q
    ||||||||||||||||||||||||| ||||| ||| || |||||||||  ||||||||||||| ||| |||  ||||||||||||||| |||||||| ||    
T  12395842 tcttttgtgttctctcttcctttctgtctcgttgtcttctacttttggcatgtgtttataatttttcgatactctttgttttggttgcctgattatcact 12395743  T
Q  102 tactcgacacatcaagtttgttattggtgtg 132  Q
    | ||| |||||||||||||||||||||||||    
T  12395742 tgctccacacatcaagtttgttattggtgtg 12395712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 2 - 132
Target Start/End: Complemental strand, 12400804 - 12400674
Alignment:
Q  2 tcttttgtgttctctcttcctttctctctcgctgttttttacttttgggttgtgtttataattgttccatatactttgttttggttgcttgattatccct 101  Q
    ||||||||||||||||||||||||| ||||| ||| || |||||||||  ||||||||||||| ||| |||  ||||||||||||||| |||||||| ||    
T  12400804 tcttttgtgttctctcttcctttctgtctcgttgtcttctacttttggcatgtgtttataatttttcgatactctttgttttggttgcctgattatcact 12400705  T
Q  102 tactcgacacatcaagtttgttattggtgtg 132  Q
    | ||| |||||||||||||||||||||||||    
T  12400704 tgctccacacatcaagtttgttattggtgtg 12400674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 23 - 148
Target Start/End: Original strand, 5101273 - 5101398
Alignment:
Q  23 ttctctctcgctgttttttacttttgggttgtgtttataattgttccatatactttgttttggttgcttgattatcccttactcgacacatcaagtttgt 122  Q
    |||||||||| |||||| | | ||||| |||||||||||||||||||||| |||||||||||||||||||| ||||||||  || |||||||||||||||    
T  5101273 ttctctctcggtgttttctccctttggcttgtgtttataattgttccatacactttgttttggttgcttgactatcccttgatccacacatcaagtttgt 5101372  T
Q  123 tattggtgtgatttttcaacgaattc 148  Q
    |||||||||| ||| ||| |||||||    
T  5101373 tattggtgtgttttctcatcgaattc 5101398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 4 - 132
Target Start/End: Original strand, 13547492 - 13547621
Alignment:
Q  4 ttttgtgttctctcttcctttctctctcgctgttttttacttttgggttgtgtttataattgttccatatactttg-ttttggttgcttgattatccctt 102  Q
    ||||||||||||||||||||||||||||| | |||| ||||||||| |||||||||||||||||||||| |||||| |||||||||  | |||||| |||    
T  13547492 ttttgtgttctctcttcctttctctctcgatcttttctacttttggcttgtgtttataattgttccatacactttgattttggttgtctaattatcactt 13547591  T
Q  103 actcgacacatcaagtttgttattggtgtg 132  Q
      || |||||||||||||||||||||||||    
T  13547592 gttccacacatcaagtttgttattggtgtg 13547621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 34 - 150
Target Start/End: Complemental strand, 37089330 - 37089216
Alignment:
Q  34 tgttttttacttttgggttgtgtttataattgttccatatactttgttttggttgcttgattatcccttactcgacacatcaagtttgttattggtgtga 133  Q
    |||||| ||||||||| |||| ||||  ||||||||||| |||||||||||||||||||||||||| || ||| ||||||||||||||||||||||||||    
T  37089330 tgttttctacttttggcttgtattta--attgttccatacactttgttttggttgcttgattatccattgctccacacatcaagtttgttattggtgtga 37089233  T
Q  134 tttttcaacgaattcgc 150  Q
    ||||||| |||||||||    
T  37089232 tttttcatcgaattcgc 37089216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 1 - 138
Target Start/End: Complemental strand, 52942486 - 52942346
Alignment:
Q  1 ttcttttgtgttctctcttcctttctctctcgctgtttttt---acttttgggttgtgtttataattgttccatatactttg-ttttggttgcttgatta 96  Q
    |||||||||||||||||||| |||| ||||||||||| |||   |||||||| |||||||||||||||||||||| |||||| ||||| |||| ||||||    
T  52942486 ttcttttgtgttctctcttcttttc-ctctcgctgttgttttctacttttggcttgtgtttataattgttccatacactttgattttgattgcctgatta 52942388  T
Q  97 tcccttactcgacacatcaagtttgttattggtgtgattttt 138  Q
    || ||||||| ||||||||| ||||||||| |||||||||||    
T  52942387 tctcttactccacacatcaaatttgttatttgtgtgattttt 52942346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 66 - 148
Target Start/End: Original strand, 6765247 - 6765329
Alignment:
Q  66 ttccatatactttgttttggttgcttgattatcccttactcgacacatcaagtttgttattggtgtgatttttcaacgaattc 148  Q
    ||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||    
T  6765247 ttccatacactttgttttggttgcttgattatcccttactccacacatcaagtttgttattggtgtgatttttcatcgaattc 6765329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 26 - 148
Target Start/End: Original strand, 16455586 - 16455708
Alignment:
Q  26 tctctcgctgttttttacttttgggttgtgtttataattgttccatatactttgttttggttgcttgattatcccttactcgacacatcaagtttgttat 125  Q
    |||||||||||||| || |||| | || || |||||| ||||||||| |||||||||||||||| |||||||| ||| ||| ||||||||||||||||||    
T  16455586 tctctcgctgttttctagttttagcttatgattataactgttccatacactttgttttggttgcctgattatcacttgctccacacatcaagtttgttat 16455685  T
Q  126 tggtgtgatttttcaacgaattc 148  Q
    ||||||||||||||| |||||||    
T  16455686 tggtgtgatttttcatcgaattc 16455708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 1 - 150
Target Start/End: Complemental strand, 17662243 - 17662096
Alignment:
Q  1 ttcttttgtgttctctcttcctttctctctc-gctgttttttacttttgggttgtgtttataattgttccatatactttgttttggttgcttgattatcc 99  Q
    |||||||||||||||||||| ||| |||| | | |||||| |||||||||  |||| |||||||||||||||| |||||| |||| ||||||||||||||    
T  17662243 ttcttttgtgttctctcttctttt-tctcgctgttgttttctacttttggcatgtgattataattgttccatacactttggtttgattgcttgattatcc 17662145  T
Q  100 cttactcgacacatcaagtttgttattggtgtgatttttcaacgaattcgc 150  Q
    ||| ||| |||||||||| ||||||||||||||| ||||||||||||||||    
T  17662144 cttgctccacacatcaag-ttgttattggtgtga-ttttcaacgaattcgc 17662096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 1 - 150
Target Start/End: Original strand, 40637409 - 40637562
Alignment:
Q  1 ttcttttgtgttctctcttcctttctctctcgctgtttttt---acttttgggttgtgtttataattgttccatatactttg--ttttggttgcttgatt 95  Q
    |||||||||||||||||||| ||| |||||||||||| |||   |||||||| ||||| |||||||||||||||| ||||||  ||||||||||||||||    
T  40637409 ttcttttgtgttctctcttctttt-tctctcgctgttgttttctacttttggcttgtgattataattgttccatacactttgttttttggttgcttgatt 40637507  T
Q  96 atcccttactcgacacatcaagtttgttattggtgtgat-ttttcaacgaattcgc 150  Q
    || |||| ||| |||||||||| |||||||||||||||| || |||||||||||||    
T  40637508 attccttgctccacacatcaag-ttgttattggtgtgatattctcaacgaattcgc 40637562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 26 - 148
Target Start/End: Original strand, 47275084 - 47275206
Alignment:
Q  26 tctctcgctgttttttacttttgggttgtgtttataattgttccatatactttgttttggttgcttgattatcccttactcgacacatcaagtttgttat 125  Q
    |||||||||||||| ||||||||| |||||||||||||| ||| ||| ||||  ||||| ||||||||||||||||||||| ||||||||||||||||||    
T  47275084 tctctcgctgttttctacttttggcttgtgtttataattattctatacacttcattttgattgcttgattatcccttactccacacatcaagtttgttat 47275183  T
Q  126 tggtgtgatttttcaacgaattc 148  Q
    || |||| |||  ||||||||||    
T  47275184 tgatgtgttttcacaacgaattc 47275206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 34 - 158
Target Start/End: Original strand, 53405508 - 53405630
Alignment:
Q  34 tgttttttacttttgggttgtgtttataattgttccatatactttgttttggttgcttgattatcccttactcgacacatcaagtttgttattggtgtga 133  Q
    |||||| ||||||||| |||| ||||||| |  |||||| | ||||||||||||||||||||||||||| ||| ||||||||||||| ||||||||||||    
T  53405508 tgttttctacttttggcttgtatttataact--tccatacattttgttttggttgcttgattatcccttgctccacacatcaagtttattattggtgtga 53405605  T
Q  134 tttttcaacgaattcgctacaattt 158  Q
    ||||||| ||||||||| |||||||    
T  53405606 tttttcatcgaattcgcaacaattt 53405630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 150
Target Start/End: Original strand, 24889131 - 24889282
Alignment:
Q  1 ttcttttgtgttctctcttcctttctctctcgctgtttttt---acttttgggttgtgtttataattgttccatatactttgttttggttgcttgattat 97  Q
    |||||||||||| ||||||| ||| |||||||||||| |||   |||||||| ||||| |||||||||||||||| ||||||||||||||| | ||||||    
T  24889131 ttcttttgtgttatctcttctttt-tctctcgctgttgttttctacttttggcttgtgattataattgttccatacactttgttttggttgttagattat 24889229  T
Q  98 cccttactcgacacatcaagtttgttattggtgtgat-ttttcaacgaattcgc 150  Q
     |||| ||| |||||||||| |||||||||||||||| |||||| |||||||||    
T  24889230 tccttgctccacacatcaag-ttgttattggtgtgatattttcatcgaattcgc 24889282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 1 - 97
Target Start/End: Original strand, 24879325 - 24879423
Alignment:
Q  1 ttcttttgtgttctctcttcctttctctctcgctgtttttt---acttttgggttgtgtttataattgttccatatactttgttttggttgcttgattat 97  Q
    |||| ||||||||||||||||||| |||||||||||| |||   |||||||| |||||||||||||||||||||| ||||||||||||||||||||||||    
T  24879325 ttctcttgtgttctctcttccttt-tctctcgctgttgttttctacttttggcttgtgtttataattgttccatacactttgttttggttgcttgattat 24879423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 4 - 157
Target Start/End: Original strand, 36378631 - 36378780
Alignment:
Q  4 ttttgtgttctctcttcctttctctctcgctgttttttacttttgggttgtgtttataattgttccatatactttgttttggttgcttgattatccctta 103  Q
    ||||||||||||||||| |||||| || |||||||| ||||||| | ||||||||||||||||| |||| |||||| |||||||||||||||||  |||     
T  36378631 ttttgtgttctctcttcttttctc-ct-gctgttttctacttttcgtttgtgtttataattgtttcatacactttg-tttggttgcttgattattacttg 36378727  T
Q  104 ctcgacacatcaagtttgttattggtgtgatttttcaacgaattcgctacaatt 157  Q
    ||| ||| ||||||| | |||||||||||| |||||| ||||||||| ||||||    
T  36378728 ctccacatatcaagtattttattggtgtga-ttttcatcgaattcgcaacaatt 36378780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 44 - 139
Target Start/End: Complemental strand, 3824560 - 3824464
Alignment:
Q  44 ttttgggttgtgtttataattgttccatatactttg-ttttggttgcttgattatcccttactcgacacatcaagtttgttattggtgtgatttttc 139  Q
    |||||| |||||||||||| ||||||||| | |||| |||||||||||||| |||||||| ||| ||||||||||||||||||||||||||||||||    
T  3824560 ttttggcttgtgtttataactgttccatacattttgattttggttgcttgactatcccttgctccacacatcaagtttgttattggtgtgatttttc 3824464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 34 - 157
Target Start/End: Complemental strand, 47210754 - 47210634
Alignment:
Q  34 tgttttttacttttgggttgtgtttataattgttccatatactttgttttggttgcttgattatcccttactcgacacatcaagtttgttattggtgtga 133  Q
    |||||| ||||||||| |||| ||||  ||||||||||| |||||||||||||||||| |||||| ||| ||| |||||||||| |||||||||||||||    
T  47210754 tgttttctacttttggcttgtattta--attgttccatacactttgttttggttgctttattatctcttgctccacacatcaag-ttgttattggtgtga 47210658  T
Q  134 tttttcaacgaattcgctacaatt 157  Q
    |||  |||||||||||| ||||||    
T  47210657 tttcacaacgaattcgcaacaatt 47210634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 34 - 148
Target Start/End: Original strand, 51015620 - 51015732
Alignment:
Q  34 tgttttttacttttgggttgtgtttataattgttccatatactttgttttggttgcttgattatcccttactcgacacatcaagtttgttattggtgtga 133  Q
    |||||| ||||||||| |||| ||||  ||||||||||| ||||||||||||||||||||||||||||| ||| |||||||||| ||||||||||||||     
T  51015620 tgttttctacttttggcttgtattta--attgttccatacactttgttttggttgcttgattatcccttgctccacacatcaag-ttgttattggtgtgt 51015716  T
Q  134 tttttc-aacgaattc 148  Q
    |||||| |||||||||    
T  51015717 tttttcgaacgaattc 51015732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 60 - 139
Target Start/End: Complemental strand, 22046620 - 22046542
Alignment:
Q  60 taattgttccatatactttgttttggttgcttgattatcccttactcgacacatcaagtttgttattggtgtgatttttc 139  Q
    ||||||||||||| ||||||||||||||||||||||||||||| ||| |||||||||| |||||||||||||||||||||    
T  22046620 taattgttccatacactttgttttggttgcttgattatcccttgctccacacatcaag-ttgttattggtgtgatttttc 22046542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 34 - 159
Target Start/End: Complemental strand, 5635434 - 5635313
Alignment:
Q  34 tgttttttacttttgggttgtgtttataattgttccatatactttgttttggttgcttgattatcccttactcgacacatcaagtttgttattggtgtga 133  Q
    |||||| ||||||||| |||| ||||  ||||||||||| ||||||||||||||| ||||||||||||| ||| |||||||||| |||||||||||||||    
T  5635434 tgttttctacttttggcttgtattta--attgttccatacactttgttttggttgattgattatcccttgctccacacatcaag-ttgttattggtgtga 5635338  T
Q  134 tttttcaacgaattcgctacaatttg 159  Q
     |||||| ||||||||| ||| ||||    
T  5635337 -ttttcatcgaattcgcaacagtttg 5635313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 34 - 148
Target Start/End: Original strand, 48486689 - 48486803
Alignment:
Q  34 tgttttttacttttgggttgtgtttataattgttccatatactttgttttggttgcttgattatcccttactcgacacatcaagtttgttattggtgtga 133  Q
    |||||| ||||||||| |||||||||||||||||||||  |||||||||| |||||||||||||| |||  || || |||||| |||||||||||||||     
T  48486689 tgttttctacttttggcttgtgtttataattgttccattcactttgttttagttgcttgattatcgcttgttccacgcatcaaatttgttattggtgtgt 48486788  T
Q  134 tttttcaacgaattc 148  Q
    ||| ||| |||||||    
T  48486789 tttctcatcgaattc 48486803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 158
Target Start/End: Original strand, 4215641 - 4215796
Alignment:
Q  1 ttcttttgtgttctctcttcctttctctctcgctgttttttacttttgggttgtgtttataattgttccatatactttgttttggttgcttgattatccc 100  Q
    |||||||||||||||| |  |||| |||||||| ||||| ||||||||| ||||| ||||||||||| |||| |||||||||| ||||||||||||| ||    
T  4215641 ttcttttgtgttctcttt--cttt-tctctcgcagttttctacttttggcttgtgattataattgtttcatacactttgtttttgttgcttgattattcc 4215737  T
Q  101 ttactcgacacatcaagtttgttattggtgtga--tttttcaacgaattcgctacaattt 158  Q
    || ||  |||||||||| |||||||| ||||||  ||| ||| ||||||||| |||||||    
T  4215738 ttgcttcacacatcaag-ttgttatttgtgtgagttttctcatcgaattcgcaacaattt 4215796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 36 - 156
Target Start/End: Complemental strand, 8631374 - 8631258
Alignment:
Q  36 ttttttacttttgggttgtgtttataattgttccatatactttgttttggttgcttgattatcccttactcgacacatcaagtttgttattggtgtgatt 135  Q
    |||| ||||||||| |||| ||||  ||||||||||| |||||||||| |||||||||||||||||| ||| |||||||||| ||||||||||||||| |    
T  8631374 ttttctacttttggcttgtattta--attgttccatacactttgttttagttgcttgattatcccttgctccacacatcaag-ttgttattggtgtga-t 8631279  T
Q  136 tttcaacgaattcgctacaat 156  Q
    ||||| ||||||||| |||||    
T  8631278 tttcatcgaattcgcaacaat 8631258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 26 - 161
Target Start/End: Complemental strand, 18409319 - 18409185
Alignment:
Q  26 tctctcgctgttttttacttttgggttgtgtttataattgttccatatactttgttttggttgcttgattatcccttactcgacacatcaagtttgttat 125  Q
    ||||||||| |||| ||||||||  ||||| |||||| |  |||||| |||||||||||||||||||| |||| ||| ||| ||||||||||||| ||||    
T  18409319 tctctcgctattttctacttttgtcttgtgattataact--tccatacactttgttttggttgcttgactatcacttgctccacacatcaagtttattat 18409222  T
Q  126 tggtgtgat-ttttcaacgaattcgctacaatttggt 161  Q
    ||||||||| |||||| ||||||| | ||||||||||    
T  18409221 tggtgtgattttttcatcgaattcacaacaatttggt 18409185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 137
Target Start/End: Original strand, 36380685 - 36380818
Alignment:
Q  1 ttcttttgtgttctctcttcctttctctctcgctgttttttacttttgggttgtgtttataattgttccatatactttgttttggttgcttgattatccc 100  Q
    |||||||||||||||||||| ||||||  ||  |||||| ||||||||| ||||||||||||||||| |||| |||||| |||| ||||||||| ||  |    
T  36380685 ttcttttgtgttctctcttcttttctccttc--tgttttctacttttggcttgtgtttataattgtttcatacactttg-tttgattgcttgatcattac 36380781  T
Q  101 ttactcgacacatcaagtttgttattggtgtgatttt 137  Q
    |||||| ||||||||| | | ||||||||||||||||    
T  36380782 ttactccacacatcaaatattttattggtgtgatttt 36380818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 34 - 137
Target Start/End: Complemental strand, 2484831 - 2484731
Alignment:
Q  34 tgttttttacttttgggttgtgtttataattgttccatatactttgttttggttgcttgattatcccttactcgacacatcaagtttgttattggtgtga 133  Q
    |||||| ||||||||| |||| ||||  ||||||||||| ||||| ||||||||||||||||||||||| ||| |||||||||| |||||||||||||||    
T  2484831 tgttttctacttttggcttgtattta--attgttccatacactttattttggttgcttgattatcccttgctccacacatcaag-ttgttattggtgtga 2484735  T
Q  134 tttt 137  Q
    ||||    
T  2484734 tttt 2484731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 63 - 155
Target Start/End: Original strand, 24348603 - 24348693
Alignment:
Q  63 ttgttccatatactttgttttggttgcttgattatcccttactcgacacatcaagtttgttattggtgtgatttttcaacgaattcgctacaa 155  Q
    |||||||||| ||||||||||||||||||||||||||||| ||| |||||||||| ||||||||||||||| |||||| ||||||||| ||||    
T  24348603 ttgttccatacactttgttttggttgcttgattatcccttgctccacacatcaag-ttgttattggtgtga-ttttcatcgaattcgcaacaa 24348693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 36 - 150
Target Start/End: Complemental strand, 31849554 - 31849444
Alignment:
Q  36 ttttttacttttgggttgtgtttataattgttccatatactttgttttggttgcttgattatcccttactcgacacatcaagtttgttattggtgtgatt 135  Q
    |||| ||||||||| |||| ||||  ||||||||||| ||||||||||||||||||||||||| ||| ||| |||||||||| ||||||||||||||| |    
T  31849554 ttttctacttttggcttgtattta--attgttccatacactttgttttggttgcttgattatctcttgctccacacatcaag-ttgttattggtgtga-t 31849459  T
Q  136 tttcaacgaattcgc 150  Q
    ||||| |||||||||    
T  31849458 tttcatcgaattcgc 31849444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 10 - 140
Target Start/End: Original strand, 41997835 - 41997961
Alignment:
Q  10 gttctctcttcctttctctctcgctgttttttacttttgggttgtgtttataattgttccatatactttgttttggttgcttgattatcccttactcgac 109  Q
    |||||||||| ||||  ||||||||||||| ||||||||  ||||| |||||| |  |||||| ||||||||||||||||||||||||| ||| ||| ||    
T  41997835 gttctctctttctttg-ctctcgctgttttctacttttgt-ttgtgattataact--tccatacactttgttttggttgcttgattatcactttctccac 41997930  T
Q  110 acatcaagtttgttattggtgtgatttttca 140  Q
    ||||||||||| ||||||||||| |||||||    
T  41997931 acatcaagtttattattggtgtgttttttca 41997961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 34 - 155
Target Start/End: Original strand, 47868776 - 47868895
Alignment:
Q  34 tgttttttacttttgggttgtgtttataattgttccatatactttg-ttttggttgcttgattatcccttactcgacacatcaagtttgttattggtgtg 132  Q
    |||||| ||||||||| |||| |||   ||||||||||| |||||| |||||||||| |||||||||||| ||| |||||||||||| ||||||||||||    
T  47868776 tgttttctacttttggcttgtatttt--attgttccatacactttgattttggttgcctgattatcccttgctccacacatcaagtt-gttattggtgtg 47868872  T
Q  133 atttttcaacgaattcgctacaa 155  Q
    |||||||| ||||||||| ||||    
T  47868873 atttttcatcgaattcgcaacaa 47868895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 36 - 137
Target Start/End: Complemental strand, 9176429 - 9176331
Alignment:
Q  36 ttttttacttttgggttgtgtttataattgttccatatactttgttttggttgcttgattatcccttactcgacacatcaagtttgttattggtgtgatt 135  Q
    |||| ||||||||| |||| ||||  ||| ||||||| ||||||||||||||||||||||||||||| ||| |||||||||| |||||||||||||||||    
T  9176429 ttttctacttttggcttgtattta--attattccatacactttgttttggttgcttgattatcccttgctccacacatcaag-ttgttattggtgtgatt 9176333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 34 - 139
Target Start/End: Complemental strand, 22044349 - 22044247
Alignment:
Q  34 tgttttttacttttgggttgtgtttataattgttccatatactttgttttggttgcttgattatcccttactcgacacatcaagtttgttattggtgtga 133  Q
    |||||| ||||||||| |||| ||||  |||||| |||| ||||||||||||||||||||||||||||| ||| |||||||||| ||||||||||||| |    
T  22044349 tgttttctacttttggcttgtattta--attgtttcatacactttgttttggttgcttgattatcccttgctccacacatcaag-ttgttattggtgtta 22044253  T
Q  134 tttttc 139  Q
    ||||||    
T  22044252 tttttc 22044247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 34 - 150
Target Start/End: Original strand, 9148610 - 9148723
Alignment:
Q  34 tgttttttacttttgggttgtgtttataattgttccatatactttgttttggttgcttgattatcccttactcgacacatcaagtttgttattggtgtga 133  Q
    |||||| ||||||||| |||| ||||  ||||||||||| ||||||||||||||||||||||||| |||  || |||||||||| ||||||||||||||     
T  9148610 tgttttctacttttggcttgtattta--attgttccatacactttgttttggttgcttgattatctcttgttccacacatcaag-ttgttattggtgtgt 9148706  T
Q  134 tttttcaacgaattcgc 150  Q
    ||| ||| |||||||||    
T  9148707 tttctcatcgaattcgc 9148723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 60 - 137
Target Start/End: Complemental strand, 11006187 - 11006111
Alignment:
Q  60 taattgttccatatactttgttttggttgcttgattatcccttactcgacacatcaagtttgttattggtgtgatttt 137  Q
    ||||||||||||| ||||||||||||||||||||||||||||| ||| |||||||||| |||||||||||||| ||||    
T  11006187 taattgttccatacactttgttttggttgcttgattatcccttgctccacacatcaag-ttgttattggtgtgttttt 11006111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 60 - 137
Target Start/End: Complemental strand, 11008501 - 11008425
Alignment:
Q  60 taattgttccatatactttgttttggttgcttgattatcccttactcgacacatcaagtttgttattggtgtgatttt 137  Q
    ||||||||||||| ||||||||||||||||||||||||||||| ||| |||||||||| |||||||||||||| ||||    
T  11008501 taattgttccatacactttgttttggttgcttgattatcccttgctccacacatcaag-ttgttattggtgtgttttt 11008425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 34 - 145
Target Start/End: Original strand, 11435329 - 11435438
Alignment:
Q  34 tgttttttacttttgggttgtgtttataattgttccatatactttgtttt-ggttgcttgattatcccttactcgacacatcaagtttgttattggtgtg 132  Q
    |||||| ||||||||| |||| ||||  ||||||||||| |||||||||| ||||||||||||||| ||| ||| |||||||||| ||||||||||||||    
T  11435329 tgttttctacttttggcttgtattta--attgttccatacactttgtttttggttgcttgattatctcttgctccacacatcaag-ttgttattggtgtg 11435425  T
Q  133 atttttcaacgaa 145  Q
    |||||||| ||||    
T  11435426 atttttcatcgaa 11435438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 26 - 150
Target Start/End: Original strand, 56030820 - 56030941
Alignment:
Q  26 tctctcgctgttttttacttttgggttgtgtttataattgttccatatactttgttttggttgcttgattatcccttactcgacacatcaagtttgttat 125  Q
    |||||||||||||| ||||||||  |||| ||||||| |  |||||| |||||||||||||||| ||| |||| ||| ||| ||| ||||||||| ||||    
T  56030820 tctctcgctgttttctacttttgt-ttgtatttataact--tccatacactttgttttggttgcgtgactatctcttgctccacatatcaagtttattat 56030916  T
Q  126 tggtgtgatttttcaacgaattcgc 150  Q
    ||||||||||||||| |||||||||    
T  56030917 tggtgtgatttttcatcgaattcgc 56030941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 5 - 155
Target Start/End: Complemental strand, 3937268 - 3937125
Alignment:
Q  5 tttgtgttctctcttcctttctctctcgctgttttttacttttgggttgtgtttataattgttccatatactttgttttggttgcttgattatcccttac 104  Q
    ||||||||||||||| |||||||||  | |||||| ||||||||  ||||| || ||  | ||||||| ||||||||| ||||||||||||||||||| |    
T  3937268 tttgtgttctctctttctttctctc--gttgttttctacttttgt-ttgtgatttta--tcttccatacactttgttt-ggttgcttgattatcccttgc 3937175  T
Q  105 tcgacacatcaagtttgttattggtgtgatttttcaacgaattcgctacaa 155  Q
    ||  ||||||||||| |||||||||||||||||||| ||||||||| ||||    
T  3937174 tcctcacatcaagtt-gttattggtgtgatttttcatcgaattcgcaacaa 3937125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 34 - 149
Target Start/End: Original strand, 14633693 - 14633805
Alignment:
Q  34 tgttttttacttttgggttgtgtttataattgttccatatactttgttttggttgcttgattatcccttactcgacacatcaagtttgttattggtgtga 133  Q
    |||||| ||||||||| |||| ||||  ||||||||||| | ||||||| ||||||||||||||| ||| ||| |||||||||| |||||||||||||||    
T  14633693 tgttttctacttttggcttgtattta--attgttccatacattttgtttcggttgcttgattatctcttgctccacacatcaag-ttgttattggtgtga 14633789  T
Q  134 tttttcaacgaattcg 149  Q
    ||| ||| ||||||||    
T  14633790 tttctcatcgaattcg 14633805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 40 - 135
Target Start/End: Complemental strand, 22134568 - 22134476
Alignment:
Q  40 ttacttttgggttgtgtttataattgttccatatactttgttttggttgcttgattatcccttactcgacacatcaagtttgttattggtgtgatt 135  Q
    |||||||||| |||| ||||  ||||||||||| ||||||||||||||| ||||||||||||| ||| |||||||||| |||||||||||||||||    
T  22134568 ttacttttggcttgtattta--attgttccatacactttgttttggttgtttgattatcccttgctccacacatcaag-ttgttattggtgtgatt 22134476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 54 - 132
Target Start/End: Complemental strand, 38270091 - 38270016
Alignment:
Q  54 tgtttataattgttccatatactttgttttggttgcttgattatcccttactcgacacatcaagtttgttattggtgtg 132  Q
    |||||||||||||||||||    ||||||||||||||||| |||||||||||| |||||||||||||||||||||||||    
T  38270091 tgtttataattgttccatac---ttgttttggttgcttgactatcccttactccacacatcaagtttgttattggtgtg 38270016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 34 - 148
Target Start/End: Complemental strand, 16931748 - 16931637
Alignment:
Q  34 tgttttttacttttgggttgtgtttataattgttccatatactttgttttggttgcttgattatcccttactcgacacatcaagtttgttattggtgtga 133  Q
    |||||| ||||||||| |||| ||||  ||| |||||||  ||||||||||||||||| |||||||||| ||| |||||| ||| |||||||||||||||    
T  16931748 tgttttctacttttggcttgtattta--attattccatacgctttgttttggttgcttaattatcccttgctccacacattaag-ttgttattggtgtga 16931652  T
Q  134 tttttcaacgaattc 148  Q
    ||||||| |||||||    
T  16931651 tttttcatcgaattc 16931637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 36 - 137
Target Start/End: Original strand, 5198781 - 5198879
Alignment:
Q  36 ttttttacttttgggttgtgtttataattgttccatatactttgttttggttgcttgattatcccttactcgacacatcaagtttgttattggtgtgatt 135  Q
    |||| ||||||||| |||| ||||  ||||||||||| |||||||||||||||||||||||||| || ||| |||||||||| || ||||||||||||||    
T  5198781 ttttctacttttggcttgtattta--attgttccatacactttgttttggttgcttgattatccattgctccacacatcaag-ttattattggtgtgatt 5198877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 40 - 135
Target Start/End: Complemental strand, 22132341 - 22132248
Alignment:
Q  40 ttacttttgggttgtgtttataattgttccatatactttgtttt-ggttgcttgattatcccttactcgacacatcaagtttgttattggtgtgatt 135  Q
    |||||||||| |||| ||||  ||||||||||| |||||||||| ||||||||||||||||||| ||| |||||||||| |||||||||||||||||    
T  22132341 ttacttttggcttgtattta--attgttccatacactttgtttttggttgcttgattatcccttgctccacacatcaag-ttgttattggtgtgatt 22132248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 62 - 150
Target Start/End: Original strand, 7941724 - 7941810
Alignment:
Q  62 attgttccatatactttgttttggttgcttgattatcccttactcgacacatcaagtttgttattggtgtgatttttcaacgaattcgc 150  Q
    ||||||||||| |||||||||||||||||| |||||||||| ||| |||||||||| ||||| ||||||||| |||||| |||||||||    
T  7941724 attgttccatacactttgttttggttgcttaattatcccttgctccacacatcaag-ttgttgttggtgtga-ttttcatcgaattcgc 7941810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 36 - 155
Target Start/End: Complemental strand, 9174101 - 9173986
Alignment:
Q  36 ttttttacttttgggttgtgtttataattgttccatatactttgttttggttgcttgattatcccttactcgacacatcaagtttgttattggtgtgatt 135  Q
    |||| ||||||||| |||| ||||  ||| || |||| ||||||||||||||||||||||||||||| ||| |||||||||| |||||||| |||||| |    
T  9174101 ttttctacttttggcttgtattta--attatttcatacactttgttttggttgcttgattatcccttgctccacacatcaag-ttgttattagtgtga-t 9174006  T
Q  136 tttcaacgaattcgctacaa 155  Q
    ||||| ||||||||| ||||    
T  9174005 tttcatcgaattcgcaacaa 9173986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 34 - 148
Target Start/End: Original strand, 11437737 - 11437849
Alignment:
Q  34 tgttttttacttttgggttgtgtttataattgttccatatactttgtttt-ggttgcttgattatcccttactcgacacatcaagtttgttattggtgtg 132  Q
    |||||| ||||||||| |||| ||||  ||||||||||| |||||||||| || |||||||||||| ||| ||| | |||||||||| ||||||||||||    
T  11437737 tgttttctacttttggcttgtattta--attgttccatacactttgtttttggctgcttgattatctcttgctccatacatcaagtt-gttattggtgtg 11437833  T
Q  133 atttttcaacgaattc 148  Q
    |||||||| |||||||    
T  11437834 atttttcatcgaattc 11437849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 7 - 133
Target Start/End: Complemental strand, 18534824 - 18534703
Alignment:
Q  7 tgtgttctctcttcctttctctctcgctgttttttacttttgggttgtgtttataattgttccatatactttgttttggttgcttgattatcccttactc 106  Q
    ||||||||||||| |||||||||  ||| |||| ||||||||  |||||||||||| |  |||||| ||||||||||||||||||||||||  ||| |||    
T  18534824 tgtgttctctctttctttctctc--gctattttctacttttgt-ttgtgtttataact--tccatacactttgttttggttgcttgattattacttgctc 18534730  T
Q  107 gacacatcaagtttgttattggtgtga 133  Q
     ||||||||||| | ||||||||||||    
T  18534729 cacacatcaagtattttattggtgtga 18534703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 97
Target Start/End: Original strand, 24880787 - 24880887
Alignment:
Q  1 ttcttttgtgttctctcttcctttctctctcgctgtttttt---acttttgggttgtgtttataattgttccatatactt--tgttttggttgcttgatt 95  Q
    |||| ||||||||||||||||||| |||||||||||| |||   |||||||| ||||||||||||||||||| || ||||  ||||||||||||||||||    
T  24880787 ttctcttgtgttctctcttccttt-tctctcgctgttgttttctacttttggcttgtgtttataattgttccgtacactttgtgttttggttgcttgatt 24880885  T
Q  96 at 97  Q
    ||    
T  24880886 at 24880887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 34 - 137
Target Start/End: Original strand, 38409579 - 38409679
Alignment:
Q  34 tgttttttacttttgggttgtgtttataattgttccatatactttgttttggttgcttgattatcccttactcgacacatcaagtttgttattggtgtga 133  Q
    |||||| ||||||||| |||| ||||  ||||||||||| | |||||||| |||||||||||||||||| ||| |||||||||| ||||||||||||||     
T  38409579 tgttttctacttttggcttgtattta--attgttccatacaatttgttttagttgcttgattatcccttgctccacacatcaag-ttgttattggtgtgt 38409675  T
Q  134 tttt 137  Q
    ||||    
T  38409676 tttt 38409679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 80 - 155
Target Start/End: Complemental strand, 22780285 - 22780211
Alignment:
Q  80 ttttggttgcttgattatcccttactcgacacatcaagtttgttattggtgtgatttttcaacgaattcgctacaa 155  Q
    |||||||||||| |||||||||| ||| |||||||||||| |||||||||||||||||||| ||||||||| ||||    
T  22780285 ttttggttgcttaattatcccttgctccacacatcaagtt-gttattggtgtgatttttcatcgaattcgcaacaa 22780211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 60 - 155
Target Start/End: Complemental strand, 44599772 - 44599679
Alignment:
Q  60 taattgttccatatactttgttttggttgcttgattatcccttactcgacacatcaagtttgttattggtgtgatttttcaacgaattcgctacaa 155  Q
    ||||| |||||||  ||||||||||||||||| ||||||| || ||| |||||||||||| |||||||||||||||||||| ||||||||| ||||    
T  44599772 taattattccatacgctttgttttggttgcttaattatcc-ttgctccacacatcaagtt-gttattggtgtgatttttcatcgaattcgcaacaa 44599679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 60 - 138
Target Start/End: Original strand, 18847552 - 18847628
Alignment:
Q  60 taattgttccatatactttgttttggttgcttgattatcccttactcgacacatcaagtttgttattggtgtgattttt 138  Q
    ||||| ||||||| ||||||||| ||||||||||||||||||| ||| |||||||||| ||||||||||||||||||||    
T  18847552 taattattccatacactttgttt-ggttgcttgattatcccttgctccacacatcaag-ttgttattggtgtgattttt 18847628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 77 - 150
Target Start/End: Original strand, 19096293 - 19096366
Alignment:
Q  77 ttgttttggttgcttgattatcccttactcgacacatcaagtttgttattggtgtgatttttcaacgaattcgc 150  Q
    |||| |||||||||||| |||||||||||| ||||||||| ||| ||||| ||||||||||||| |||||||||    
T  19096293 ttgtattggttgcttgactatcccttactccacacatcaaatttattattagtgtgatttttcatcgaattcgc 19096366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 80 - 157
Target Start/End: Complemental strand, 22782650 - 22782574
Alignment:
Q  80 ttttggttgcttgattatcccttactcgacacatcaagtttgttattggtgtgatttttcaacgaattcgctacaatt 157  Q
    |||||||||||| |||||||||| ||| |||||||||| |||||||||||||||||||||  ||||||||| ||||||    
T  22782650 ttttggttgcttaattatcccttgctccacacatcaag-ttgttattggtgtgatttttcgtcgaattcgcaacaatt 22782574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 7 - 138
Target Start/End: Complemental strand, 38890217 - 38890090
Alignment:
Q  7 tgtgttctctcttcctttctctctcgctgttttttacttttgggttgtgtttataattgttccatatactttgttttggttgcttgattatcccttactc 106  Q
    ||||||||||||| |||| |||||||||||||| || |||||  |||||||||||| |  |||||| ||||||||| ||||||| |||||| |||| |||    
T  38890217 tgtgttctctctttcttt-tctctcgctgttttctaattttgccttgtgtttataact--tccatacactttgttt-ggttgctagattattccttgctc 38890122  T
Q  107 gacacatcaagtttgttattggtgtgattttt 138  Q
     ||| ||||| | | |||||||||||||||||    
T  38890121 cacatatcaaatattttattggtgtgattttt 38890090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 69 - 138
Target Start/End: Complemental strand, 18709088 - 18709020
Alignment:
Q  69 catatactttgttttggttgcttgattatcccttactcgacacatcaagtttgttattggtgtgattttt 138  Q
    |||| |||||||||||||||||||||||| |||| ||| |||||||||| |||||||||||||| |||||    
T  18709088 catacactttgttttggttgcttgattatgccttgctccacacatcaag-ttgttattggtgtggttttt 18709020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 34 - 137
Target Start/End: Original strand, 5664605 - 5664706
Alignment:
Q  34 tgttttttacttttgggttgtgtttataattgttccatatactttgttttggttgcttgattatcccttactcgacacatcaagtttgttattggtgtga 133  Q
    |||||| ||||||||| ||||  |||||| |  |||||| ||||||||||||||||||||||||  | | ||| ||||||||||| | ||||||||||||    
T  5664605 tgttttctacttttggtttgtcattataact--tccatacactttgttttggttgcttgattattaccttctccacacatcaagtattttattggtgtga 5664702  T
Q  134 tttt 137  Q
    ||||    
T  5664703 tttt 5664706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 26 - 137
Target Start/End: Original strand, 12102442 - 12102550
Alignment:
Q  26 tctctcgctgttttttacttttgggttgtgtttataattgttccatatactttgttttggttgcttgattatcccttactcgacacatcaagtttgttat 125  Q
    |||||| ||||||||||||||||  |||||||||||| |  |||||| ||||||||||||||||| | ||||  ||| ||| |||||||||||   ||||    
T  12102442 tctctcactgttttttacttttgc-ttgtgtttataact--tccatacactttgttttggttgctcggttattacttgctccacacatcaagtagtttat 12102538  T
Q  126 tggtgtgatttt 137  Q
    ||||||||||||    
T  12102539 tggtgtgatttt 12102550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 34 - 135
Target Start/End: Complemental strand, 26085935 - 26085836
Alignment:
Q  34 tgttttttacttttgggttgtgtttataattgttccatatactttg-ttttggttgcttgattatcccttactcgacacatcaagtttgttattggtgtg 132  Q
    |||||| ||||||||| |||| ||||||| | |  |||| |||||| |||||||||||||| |||||||| ||| |||||||||| ||||||||||||||    
T  26085935 tgttttctacttttggcttgtatttataacttt--catacactttgattttggttgcttgactatcccttgctccacacatcaag-ttgttattggtgtg 26085839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #78
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 77 - 155
Target Start/End: Complemental strand, 619375 - 619297
Alignment:
Q  77 ttgttttggttgcttgattatcccttactcgacacatcaagtttgttattggtgtgatttttcaacgaattcgctacaa 155  Q
    |||| |||||||||||| |||||||||||| ||||||||| ||| ||||||||||| ||| ||| ||||| ||| ||||    
T  619375 ttgtattggttgcttgactatcccttactccacacatcaaatttattattggtgtgttttctcatcgaatccgcaacaa 619297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #79
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 10 - 133
Target Start/End: Complemental strand, 18537463 - 18537345
Alignment:
Q  10 gttctctcttcctttctctctcgctgttttttacttttgggttgtgtttataattgttccatatactttgttttggttgcttgattatcccttactcgac 109  Q
    |||||||||| |||||||||  | |||||| ||||||||  |||||||||||| |  |||||| ||||||||||| ||||||||||||  ||| ||| ||    
T  18537463 gttctctctttctttctctc--gttgttttatacttttgt-ttgtgtttataact--tccatacactttgttttgattgcttgattattacttgctccac 18537369  T
Q  110 acatcaagtttgttattggtgtga 133  Q
    ||||||||| | |||| |||||||    
T  18537368 acatcaagtattttataggtgtga 18537345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #80
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 7 - 137
Target Start/End: Complemental strand, 8756243 - 8756119
Alignment:
Q  7 tgtgttctctcttcctttctctctcgctgttttttacttttgggttgtgtttataattgttccatatactttgttttggttgcttgattatcccttactc 106  Q
    ||||||||||||| |||||||||  | |||||||||||||||  |||||||||||| |||  ||   |||| |||||||||||||||||||  ||| |||    
T  8756243 tgtgttctctctttctttctctc--gttgttttttacttttgc-ttgtgtttataactgt--cacccactt-gttttggttgcttgattattacttgctc 8756150  T
Q  107 gacacatcaagtttgttattggtgtgatttt 137  Q
     ||||||||||| | |||||| |||||||||    
T  8756149 cacacatcaagtattttattgatgtgatttt 8756119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #81
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 74 - 157
Target Start/End: Original strand, 10113273 - 10113354
Alignment:
Q  74 actttgttttggttgcttgattatcccttactcgacacatcaagtttgttattggtgtgatttttcaacgaattcgctacaatt 157  Q
    ||||||||||||||||||||||||   || ||| ||||||||| | | ||||||||||||||||||||||| ||| | ||||||    
T  10113273 actttgttttggttgcttgattatt--ttgctccacacatcaaatattttattggtgtgatttttcaacgacttcacaacaatt 10113354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #82
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 7 - 137
Target Start/End: Complemental strand, 15032539 - 15032410
Alignment:
Q  7 tgtgttctctcttcctttct--ctctcgctgttttt-tacttttgggttgtgtttataattgttccatatactttgttttggttgcttgattatccctta 103  Q
    |||||||| |||| ||||||  |||||||||||||| ||||||||  || ||||||||| |  |||||| ||||||||| ||||||||||||||  |||     
T  15032539 tgtgttctttctttctttctttctctcgctgtttttctacttttgt-ttatgtttataact--tccatacactttgttt-ggttgcttgattattacttg 15032444  T
Q  104 ctcgacacatcaagtttgttattggtgtgatttt 137  Q
    |||  |||||||||| | ||||||||||||||||    
T  15032443 ctccgcacatcaagtattttattggtgtgatttt 15032410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #83
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 66 - 137
Target Start/End: Original strand, 19323090 - 19323161
Alignment:
Q  66 ttccatatactttgttttggttgcttgattatcccttactcgacacatcaagtttgttattggtgtgatttt 137  Q
    ||||||| ||||| |||| |||||||||||||  ||| ||| ||||||||||| | ||||||||||||||||    
T  19323090 ttccatacactttattttagttgcttgattattacttgctccacacatcaagtattttattggtgtgatttt 19323161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #84
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 77 - 157
Target Start/End: Complemental strand, 16934062 - 16933985
Alignment:
Q  77 ttgttttggttgcttgattatcccttactcgacacatcaagtttgttattggtgtgatttttcaacgaattcgctacaatt 157  Q
    ||||||||||||||| |||  ||||| ||| |||||| ||||| |||||||||||||||||||| ||||||| | ||||||    
T  16934062 ttgttttggttgcttaatt--cccttgctccacacattaagtt-gttattggtgtgatttttcatcgaattcacaacaatt 16933985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #85
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 30136885 - 30136945
Alignment:
Q  1 ttcttttgtgttctctcttcctttctctctcgctgttttttacttttgggttgtgtttataa 62  Q
    ||||||||||||||||||| |||| ||||| | |||||| ||||||||| ||||||||||||    
T  30136885 ttcttttgtgttctctctttcttt-tctcttgttgttttctacttttggtttgtgtttataa 30136945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #86
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 7 - 148
Target Start/End: Original strand, 9864053 - 9864190
Alignment:
Q  7 tgtgttctctcttcctttctctctcgctgttttttacttttgggttgtg--tttataattgttccatatactttgttttggttgcttgattatcccttac 104  Q
    ||||||||||||| |||||||||  | |||||| ||||||||  |||||  ||||||| ||||||    ||||| |||||||| |||||||||   ||      
T  9864053 tgtgttctctctttctttctctc--gttgttttctacttttgc-ttgtgattttataactgttccc---actttattttggtttcttgattattttttct 9864146  T
Q  105 tcgacacatcaagtttgttattggtgtgatttttcaacgaattc 148  Q
    || ||||||||||| | |||||| ||||||||||||||||||||    
T  9864147 tccacacatcaagtattttattgatgtgatttttcaacgaattc 9864190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #87
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 95 - 161
Target Start/End: Complemental strand, 18311275 - 18311208
Alignment:
Q  95 tatcccttactcgacacatcaagtttgttattggtgtgat-ttttcaacgaattcgctacaatttggt 161  Q
    |||| ||| ||| ||||||||||||| ||||||||||||| |||||| ||||||| | ||||||||||    
T  18311275 tatcacttgctccacacatcaagtttattattggtgtgattttttcatcgaattcacaacaatttggt 18311208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #88
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 7 - 69
Target Start/End: Original strand, 22295506 - 22295565
Alignment:
Q  7 tgtgttctctcttcctttctctctcgctgttttttacttttgggttgtgtttataattgttcc 69  Q
    |||||||||||||||||  |||||||||||||| ||| ||| | |||||||||||||||||||    
T  22295506 tgtgttctctcttcctt--tctctcgctgttttctaccttt-gcttgtgtttataattgttcc 22295565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #89
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 3 - 38
Target Start/End: Complemental strand, 38270122 - 38270087
Alignment:
Q  3 cttttgtgttctctcttcctttctctctcgctgttt 38  Q
    |||||||||||||||||||||| |||||||||||||    
T  38270122 cttttgtgttctctcttcctttttctctcgctgttt 38270087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #90
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 7 - 97
Target Start/End: Original strand, 28454024 - 28454113
Alignment:
Q  7 tgtgttctctcttcctttctctctc--gctgttttttacttttgggttgtgtttataattgttccatatactttgttttggttgcttgattat 97  Q
    ||||||||||||| |||||| ||||  | |||||| ||||||||  ||||||||||||||||  |||  |||||||||||||| |||||||||    
T  28454024 tgtgttctctctttctttctttctccggttgttttctacttttgc-ttgtgtttataattgt--catccactttgttttggtttcttgattat 28454113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #91
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 74 - 145
Target Start/End: Original strand, 10114720 - 10114789
Alignment:
Q  74 actttgttttggttgcttgattatcccttactcgacacatcaagtttgttattggtgtgatttttcaacgaa 145  Q
    |||||||||||||||||| || ||   ||| || ||||||||| | | ||||||||||||||||||||||||    
T  10114720 actttgttttggttgctttataatt--ttattccacacatcaaatattttattggtgtgatttttcaacgaa 10114789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #92
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 108 - 148
Target Start/End: Complemental strand, 25613856 - 25613816
Alignment:
Q  108 acacatcaagtttgttattggtgtgatttttcaacgaattc 148  Q
    ||||||||||||| ||||||||||| |||| ||||||||||    
T  25613856 acacatcaagttttttattggtgtgtttttgcaacgaattc 25613816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 112; Significance: 1e-56; HSPs: 48)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 1 - 148
Target Start/End: Complemental strand, 33541408 - 33541261
Alignment:
Q  1 ttcttttgtgttctctcttcctttctctctcgctgttttttacttttgggttgtgtttataattgttccatatactttgttttggttgcttgattatccc 100  Q
    ||||||||||||||||||||||||||||||||||| ||| ||||||||| |||||||||||||||||||||| ||||| ||||| |||||||||||||||    
T  33541408 ttcttttgtgttctctcttcctttctctctcgctgatttctacttttggcttgtgtttataattgttccatacactttattttgattgcttgattatccc 33541309  T
Q  101 ttactcgacacatcaagtttgttattggtgtgatttttcaacgaattc 148  Q
    |||||| ||||||||||||||||||||||||||||||| | |||||||    
T  33541308 ttactccacacatcaagtttgttattggtgtgatttttgatcgaattc 33541261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 1 - 138
Target Start/End: Original strand, 14808098 - 14808235
Alignment:
Q  1 ttcttttgtgttctctcttcctttctctctcgctgttttttacttttgggttgtgtttataattgttccatatactttgttttggttgcttgattatccc 100  Q
    |||||||||||||||||||| ||||||||||| |||||| ||||||||| ||||||||||||||||| |||| ||||||||||||||||||||||||||     
T  14808098 ttcttttgtgttctctcttcttttctctctcgttgttttctacttttggcttgtgtttataattgtttcatacactttgttttggttgcttgattatccg 14808197  T
Q  101 ttactcgacacatcaagtttgttattggtgtgattttt 138  Q
    || ||| |||||||||||||||||||||||||||||||    
T  14808198 ttgctccacacatcaagtttgttattggtgtgattttt 14808235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 1 - 137
Target Start/End: Complemental strand, 30480501 - 30480365
Alignment:
Q  1 ttcttttgtgttctctcttcctttctctctcgctgttttttacttttgggttgtgtttataattgttccatatactttgttttggttgcttgattatccc 100  Q
    |||||||||||||||||||| |||||||||||||||||| ||||||||| |||| ||||||||||||||||| |||||||||||||||||||||||| ||    
T  30480501 ttcttttgtgttctctcttcttttctctctcgctgttttctacttttggcttgtatttataattgttccatacactttgttttggttgcttgattattcc 30480402  T
Q  101 ttactcgacacatcaagtttgttattggtgtgatttt 137  Q
    |||||| ||||||||| |||||||||||||| |||||    
T  30480401 ttactccacacatcaaatttgttattggtgtcatttt 30480365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 4 - 150
Target Start/End: Original strand, 15073051 - 15073198
Alignment:
Q  4 ttttgtgttctctcttcctttctctctc-gctgttttttacttttgggttgtgtttataattgttccatatactttgttttggttgcttgattatccctt 102  Q
    ||||||||||||||||| |||||||| | | |||||| ||||||||| |||||||||||||||||||||| ||||||||||| |||||||| ||||||||    
T  15073051 ttttgtgttctctcttcttttctctcgctgttgttttctacttttggcttgtgtttataattgttccatacactttgttttgattgcttgactatccctt 15073150  T
Q  103 actcgacacatcaagtttgttattggtgtgatttttcaacgaattcgc 150  Q
     ||| ||||||||||||||||||||||||||||||||| |||||||||    
T  15073151 gctccacacatcaagtttgttattggtgtgatttttcatcgaattcgc 15073198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 1 - 157
Target Start/End: Complemental strand, 14419188 - 14419032
Alignment:
Q  1 ttcttttgtgttctctcttcctttctctctcgctgttttttacttttgggttgtgtttataattgttccatatactttgttttggttgcttgattatccc 100  Q
    |||||||||||||||||||| |||||||||||||||||| ||||||||  |||||||||||||||||||||| |||||||||||||| | |||||||| |    
T  14419188 ttcttttgtgttctctcttcttttctctctcgctgttttctacttttgacttgtgtttataattgttccatacactttgttttggtttcctgattatcac 14419089  T
Q  101 ttactcgacacatcaagtttgttattggtgtgatttttcaacgaattcgctacaatt 157  Q
    || ||| | ||||||||||||||||||||||| ||| ||| ||||||| | ||||||    
T  14419088 ttgctccatacatcaagtttgttattggtgtgttttctcatcgaattcacaacaatt 14419032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 1 - 132
Target Start/End: Complemental strand, 37214262 - 37214131
Alignment:
Q  1 ttcttttgtgttctctcttcctttctctctcgctgttttttacttttgggttgtgtttataattgttccatatactttgttttggttgcttgattatccc 100  Q
    |||||||||||| ||||||||||||||||||| |||||| ||||||||| |||||||||||||||||| ||| ||||||||||||||||||| ||||| |    
T  37214262 ttcttttgtgttttctcttcctttctctctcgttgttttctacttttggcttgtgtttataattgttctatacactttgttttggttgcttgcttatctc 37214163  T
Q  101 ttactcgacacatcaagtttgttattggtgtg 132  Q
    |||||| | |||||||||||||||||||||||    
T  37214162 ttactccatacatcaagtttgttattggtgtg 37214131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 1 - 148
Target Start/End: Complemental strand, 35872451 - 35872307
Alignment:
Q  1 ttcttttgtgttctctcttcctttctctctcgctgttttttacttttgggttgtgtttataattgttccatatactttgttttggttgcttgattatccc 100  Q
    |||||||||||||||||||| |||||||||   |||||| ||||||||| |||||||||||||| ||||||| ||||| |||||||||||||||||||||    
T  35872451 ttcttttgtgttctctcttcttttctctct---tgttttctacttttggcttgtgtttataatttttccatacactttattttggttgcttgattatccc 35872355  T
Q  101 ttactcgacacatcaagtttgttattggtgtgatttttcaacgaattc 148  Q
    |||||  ||||||||||||||||||||||||| ||| ||| |||||||    
T  35872354 ttacttcacacatcaagtttgttattggtgtgttttctcatcgaattc 35872307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 1 - 157
Target Start/End: Original strand, 41382999 - 41383157
Alignment:
Q  1 ttcttttgtgttctctcttcctttctctctcgctgtttttt---acttttgggttgtgtttataattgttccatatactttgttttggttgcttgattat 97  Q
    |||||||||||||||||||||||| |||||||||||| |||   |||| ||| |||||||||||||||||||||| ||||||||||| ||||||||||||    
T  41382999 ttcttttgtgttctctcttccttt-tctctcgctgttgttttctacttctggcttgtgtttataattgttccataaactttgttttgattgcttgattat 41383097  T
Q  98 cccttactcgacacatcaagtttgttattggtgtgatttttcaacgaattcgctacaatt 157  Q
    | ||| ||| ||||||||||||||||||||||||| ||||||| |||| |||| ||||||    
T  41383098 ctcttgctccacacatcaagtttgttattggtgtggtttttcatcgaactcgcaacaatt 41383157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 1 - 157
Target Start/End: Original strand, 15068318 - 15068475
Alignment:
Q  1 ttcttttgtgttctctcttcctttctctctc-gctgttttttacttttgggttgtgtttataattgttccatatactttgttttggttgcttgattatcc 99  Q
    ||||||||||||| | |||| |||||||| | | |||||| ||||||||| |||||||| ||||||||||||| |||||||||||||||||||| |||||    
T  15068318 ttcttttgtgttcacccttcttttctctcgctgttgttttctacttttggcttgtgtttgtaattgttccatacactttgttttggttgcttgactatcc 15068417  T
Q  100 cttactcgacacatcaagtttgttattggtgtgatttttcaacgaattcgctacaatt 157  Q
    |||  || |||||||||||||||| |||||||||||||||| ||||||||| ||||||    
T  15068418 cttgttccacacatcaagtttgttgttggtgtgatttttcatcgaattcgcaacaatt 15068475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 1 - 148
Target Start/End: Original strand, 14477588 - 14477734
Alignment:
Q  1 ttcttttgtgttctctcttcctttctctctcgctgttttttacttttgggttgtgtttataattgttccatatactttgttttggttgcttgattatccc 100  Q
    |||||||||||||| ||||| ||||||||||||| ||||||  |||||| |||||||||| |||||| |||| |||||||||||||||  |||||||| |    
T  14477588 ttcttttgtgttctttcttcttttctctctcgcttttttttt-ttttggcttgtgtttatgattgtttcatacactttgttttggttgtctgattatcac 14477686  T
Q  101 ttactcgacacatcaagtttgttattggtgtgatttttcaacgaattc 148  Q
    || ||| ||||||||||||||||||||||||||||||||| |||||||    
T  14477687 ttgctccacacatcaagtttgttattggtgtgatttttcatcgaattc 14477734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 1 - 148
Target Start/End: Original strand, 25952858 - 25953004
Alignment:
Q  1 ttcttttgtgttctctcttcctttctctctcgctgttttttacttttgggttgtgtttataattgttccatatactttgttttggttgcttgattatccc 100  Q
    ||||||||||||||||||| |||| |||||||| ||||| ||||||||| ||||||||||||||| | |||| ||||| ||||||||||||||||||| |    
T  25952858 ttcttttgtgttctctctttcttt-tctctcgccgttttctacttttggattgtgtttataattgcttcatacactttattttggttgcttgattatcac 25952956  T
Q  101 ttactcgacacatcaagtttgttattggtgtgatttttcaacgaattc 148  Q
    || ||| ||||||||||||||||||||||||| ||| ||| |||||||    
T  25952957 tttctccacacatcaagtttgttattggtgtgttttctcatcgaattc 25953004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 5 - 147
Target Start/End: Complemental strand, 13858479 - 13858341
Alignment:
Q  5 tttgtgttctctcttcctttctctctcgctgttttttacttttgggttgtgtttataattgttccatatactttgttttggttgcttgattatcccttac 104  Q
    ||||||||||| ||| ||||||||| |  |||||| ||||||||| |||||||||||| |  |||||| ||||||||||||||||||||||||| ||| |    
T  13858479 tttgtgttctccctttctttctctcac--tgttttctacttttggcttgtgtttataact--tccatacactttgttttggttgcttgattatcacttgc 13858384  T
Q  105 tcgacacatcaagtttgttattggtgtgatttttcaacgaatt 147  Q
    || ||||||||||||| ||||||||||||||||||| ||||||    
T  13858383 tccacacatcaagtttcttattggtgtgatttttcatcgaatt 13858341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 26 - 137
Target Start/End: Original strand, 36865901 - 36866012
Alignment:
Q  26 tctctcgctgttttttacttttgggttgtgtttataattgttccatatactttgttttggttgcttgattatcccttactcgacacatcaagtttgttat 125  Q
    ||||||| |||||| ||||||||| || ||||||||||||||||||| ||||||||||||||||||||||||| ||| ||| ||||||||||||||||||    
T  36865901 tctctcgttgttttctacttttggcttttgtttataattgttccatacactttgttttggttgcttgattatcacttgctccacacatcaagtttgttat 36866000  T
Q  126 tggtgtgatttt 137  Q
    || |||| ||||    
T  36866001 tgatgtggtttt 36866012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 1 - 138
Target Start/End: Complemental strand, 28251565 - 28251427
Alignment:
Q  1 ttcttttgtgttctctcttcctttctctctcgctgtttttt---acttttgggttgtgtttataattgttccatatactttgttttggttgcttgattat 97  Q
    |||||||||||||||||||| ||| |||||||||||| |||   |||| ||| ||||| |||||||||||||||| |||||||||||||||| |||||||    
T  28251565 ttcttttgtgttctctcttctttt-tctctcgctgttgttttctacttgtggcttgtgattataattgttccatacactttgttttggttgcctgattat 28251467  T
Q  98 cccttactcgacacatcaagtttgttattggtgtgattttt 138  Q
     |||| ||| |||||||||| ||||||||||||||||||||    
T  28251466 tccttgctccacacatcaag-ttgttattggtgtgattttt 28251427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 148
Target Start/End: Complemental strand, 15185712 - 15185570
Alignment:
Q  1 ttcttttgtgttctctcttcctttctctctcgctgttttttacttttgggttgtgtttataattgttccatatactttgttttggttgcttgattatccc 100  Q
    ||||||| ||||||||||| |||||||||  | |||||| ||||||||  || || |||||| |  |||||| |||||||||||||||||||| ||||||    
T  15185712 ttcttttttgttctctctttctttctctc--gttgttttctacttttgt-ttatgattataact--tccatacactttgttttggttgcttgactatccc 15185618  T
Q  101 ttactcgacacatcaagtttgttattggtgtgatttttcaacgaattc 148  Q
    |||||| |||||||||||||||||||| |||||||||||| |||||||    
T  15185617 ttactccacacatcaagtttgttattgatgtgatttttcaccgaattc 15185570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 60 - 157
Target Start/End: Original strand, 27827386 - 27827482
Alignment:
Q  60 taattgttccatatactttgttttggttgcttgattatcccttactcgacacatcaagtttgttattggtgtgatttttcaacgaattcgctacaatt 157  Q
    ||||||||||||| |||||||||||||||||||| |||||||| ||| |||||||||||||||||||||||||| |||||| ||||||||| ||||||    
T  27827386 taattgttccatacactttgttttggttgcttgactatcccttgctccacacatcaagtttgttattggtgtga-ttttcatcgaattcgcaacaatt 27827482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 155
Target Start/End: Original strand, 41385081 - 41385234
Alignment:
Q  1 ttcttttgtgttctctcttcc-tttctctctc-gctgttttttacttttgggttgtgtttataattgttccatatac-tttgttttggttgcttgattat 97  Q
    ||||||| ||||||||||||| |||||||| | | |||||| ||||||||| |||||||||||||||||||||| || ||||||||||||| ||||||||    
T  41385081 ttcttttctgttctctcttccatttctctcgctgttgttttatacttttggcttgtgtttataattgttccatacacttttgttttggttgtttgattat 41385180  T
Q  98 cccttactcgacacatcaagtttgttattggtgtgatttttcaacgaattcgctacaa 155  Q
    ||||| |||    || ||||||||||||| |||||||||||||  |||||||| ||||    
T  41385181 cccttgctc----caccaagtttgttatttgtgtgatttttcatggaattcgcaacaa 41385234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 34 - 148
Target Start/End: Original strand, 3874370 - 3874481
Alignment:
Q  34 tgttttttacttttgggttgtgtttataattgttccatatactttgttttggttgcttgattatcccttactcgacacatcaagtttgttattggtgtga 133  Q
    |||||| ||||||||| |||| ||||  ||||||||||| ||||||||||||||||||| ||||| ||| ||| |||||||||| |||||||||||||||    
T  3874370 tgttttctacttttggcttgtattta--attgttccatacactttgttttggttgcttggttatctcttgctccacacatcaag-ttgttattggtgtga 3874466  T
Q  134 tttttcaacgaattc 148  Q
    |||||||||||||||    
T  3874467 tttttcaacgaattc 3874481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 34 - 156
Target Start/End: Complemental strand, 28283179 - 28283060
Alignment:
Q  34 tgttttttacttttgggttgtgtttataattgttccatatactttgttttggttgcttgattatcccttactcgacacatcaagtttgttattggtgtga 133  Q
    |||||| ||||||||| |||| |||||  || || |||| ||||||||||||||||||||||||||||| ||| |||||||||| |||||||||||||||    
T  28283179 tgttttctacttttggcttgtatttat--ttttttcatacactttgttttggttgcttgattatcccttgctccacacatcaag-ttgttattggtgtga 28283083  T
Q  134 tttttcaacgaattcgctacaat 156  Q
    ||||||| ||||||||| |||||    
T  28283082 tttttcatcgaattcgcaacaat 28283060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 60 - 150
Target Start/End: Original strand, 27829697 - 27829786
Alignment:
Q  60 taattgttccatatactttgttttggttgcttgattatcccttactcgacacatcaagtttgttattggtgtgatttttcaacgaattcgc 150  Q
    ||||||||||||| |||||||||||||||||||| |||||||| ||| |||||||||||||||||||||||||| |||||| |||||||||    
T  27829697 taattgttccatacactttgttttggttgcttgactatcccttgctccacacatcaagtttgttattggtgtga-ttttcatcgaattcgc 27829786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 34 - 155
Target Start/End: Original strand, 43530492 - 43530610
Alignment:
Q  34 tgttttttacttttgggttgtgtttataattgttccatatactttgttttggttgcttgattatcccttactcgacacatcaagtttgttattggtgtga 133  Q
    |||||| ||||||||| |||| ||||  ||||||||||| ||||||||||||||||||||||||| ||| ||| |||||||||| |||||||||||||||    
T  43530492 tgttttctacttttggcttgtattta--attgttccatacactttgttttggttgcttgattatctcttgctccacacatcaag-ttgttattggtgtga 43530588  T
Q  134 tttttcaacgaattcgctacaa 155  Q
    |||||||  |||||||| ||||    
T  43530589 tttttcattgaattcgcaacaa 43530610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 34 - 150
Target Start/End: Complemental strand, 3883553 - 3883440
Alignment:
Q  34 tgttttttacttttgggttgtgtttataattgttccatatactttgttttggttgcttgattatcccttactcgacacatcaagtttgttattggtgtga 133  Q
    |||||| ||||||||| |||| ||||  ||||||||||| |||||||||||||||||||||||||| || ||| |||||||||| ||||||||| |||||    
T  3883553 tgttttctacttttggcttgtattta--attgttccatacactttgttttggttgcttgattatcctttgctccacacatcaag-ttgttattgatgtga 3883457  T
Q  134 tttttcaacgaattcgc 150  Q
    ||||||| |||||||||    
T  3883456 tttttcatcgaattcgc 3883440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 35 - 157
Target Start/End: Original strand, 18811085 - 18811205
Alignment:
Q  35 gttttttacttttgggttgtgtttataattgttccatatactttg-ttttggttgcttgattatcccttactcgacacatcaagtttgttattggtgtga 133  Q
    ||||| ||||||||| |||| ||||  ||||||||||| |||||| ||||||||||||||||||| ||| ||| |||||||||||| |||||||||||||    
T  18811085 gttttctacttttggcttgtattta--attgttccatacactttgattttggttgcttgattatctcttgctccacacatcaagtt-gttattggtgtga 18811181  T
Q  134 tttttcaacgaattcgctacaatt 157  Q
    ||||||| ||||||||| ||||||    
T  18811182 tttttcatcgaattcgcaacaatt 18811205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 24 - 148
Target Start/End: Original strand, 27911439 - 27911561
Alignment:
Q  24 tctctctcgctgttttttacttttgggttgtgtttataattgttccatatactttgttttggttgcttgattatcccttactcgacacatcaagtttgtt 123  Q
    ||||||||| |||||| ||||||||| |||||||||||||||||||| | |||||||||| ||| ||  |||||| ||| ||| ||||||||||||| ||    
T  27911439 tctctctcgttgttttctacttttggcttgtgtttataattgttcca-acactttgttttagtttcta-attatcacttgctccacacatcaagtttttt 27911536  T
Q  124 attggtgtgatttttcaacgaattc 148  Q
    ||||||||||||||||||| |||||    
T  27911537 attggtgtgatttttcaacaaattc 27911561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 24 - 148
Target Start/End: Original strand, 27957858 - 27957980
Alignment:
Q  24 tctctctcgctgttttttacttttgggttgtgtttataattgttccatatactttgttttggttgcttgattatcccttactcgacacatcaagtttgtt 123  Q
    ||||||||| |||||| ||||||||| |||||||||||||||||||| | |||||||||| ||| ||  |||||| ||| ||| ||||||||||||| ||    
T  27957858 tctctctcgttgttttctacttttggcttgtgtttataattgttcca-acactttgttttagtttcta-attatcacttgctccacacatcaagtttttt 27957955  T
Q  124 attggtgtgatttttcaacgaattc 148  Q
    ||||||||||||||||||| |||||    
T  27957956 attggtgtgatttttcaacaaattc 27957980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 60 - 135
Target Start/End: Original strand, 44721244 - 44721318
Alignment:
Q  60 taattgttccatatactttgttttggttgcttgattatcccttactcgacacatcaagtttgttattggtgtgatt 135  Q
    ||||| ||||||| ||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||    
T  44721244 taattattccatacactttgttttggttgcttgattatcccttactccacacatcaag-ttgttattggtgtgatt 44721318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 60 - 150
Target Start/End: Original strand, 15809619 - 15809707
Alignment:
Q  60 taattgttccatatactttgttttggttgcttgattatcccttactcgacacatcaagtttgttattggtgtgatttttcaacgaattcgc 150  Q
    |||||||| |||| ||||||||||||||||||||||||||||| ||| |||||||||| ||||||||||||||| |||||| |||||||||    
T  15809619 taattgtttcatacactttgttttggttgcttgattatcccttgctccacacatcaag-ttgttattggtgtga-ttttcatcgaattcgc 15809707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 148
Target Start/End: Original strand, 15956295 - 15956437
Alignment:
Q  1 ttcttttgtgttctctcttcctttctctctcgctgttttttacttttgggttgtgtttataattgttccatatactttgttttggttgcttgattatccc 100  Q
    ||||||||| |||||||||| ||||||||  | |||||| |||||| |  ||||| |||||| | |  |||| ||||||||||||||| |||| ||||||    
T  15956295 ttcttttgtattctctcttcttttctctc--gttgttttctactttcgt-ttgtgattataacttt--catacactttgttttggttgtttgactatccc 15956389  T
Q  101 ttactcgacacatcaagtttgttattggtgtgatttttcaacgaattc 148  Q
    || ||| |||||||||||||||||||| |||||||||||| |||||||    
T  15956390 ttgctccacacatcaagtttgttattgatgtgatttttcatcgaattc 15956437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 35 - 150
Target Start/End: Original strand, 18813259 - 18813372
Alignment:
Q  35 gttttttacttttgggttgtgtttataattgttccatatactttg-ttttggttgcttgattatcccttactcgacacatcaagtttgttattggtgtga 133  Q
    ||||| ||||||||| |||| ||||  ||||||||||| |||||| ||||||||||||||||||| ||| ||| ||| |||||||| |||||||||||||    
T  18813259 gttttctacttttggcttgtattta--attgttccatacactttgattttggttgcttgattatctcttgctctacatatcaagtt-gttattggtgtga 18813355  T
Q  134 tttttcaacgaattcgc 150  Q
    ||||||| |||||||||    
T  18813356 tttttcatcgaattcgc 18813372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 7 - 148
Target Start/End: Original strand, 21482653 - 21482792
Alignment:
Q  7 tgtgttctctcttcctttctctctcgctgttttttacttttgggttgtgtttataattgttccatatactt--tgttttggttgcttgattatcccttac 104  Q
    ||||||||||||| |||| |||||||||||||| ||||||| | ||||| ||||||   ||||||| ||||  | |||||||||||| |||||| ||| |    
T  21482653 tgtgttctctctttcttt-tctctcgctgttttctactttt-gtttgtgattataa--cttccatacactttattttttggttgcttcattatcacttgc 21482748  T
Q  105 tcgacacatcaagtttgttattggtgtgatttttcaacgaattc 148  Q
    || ||||||||||||| ||||||||||||||||||| |||||||    
T  21482749 tccacacatcaagtttattattggtgtgatttttcatcgaattc 21482792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 66 - 147
Target Start/End: Complemental strand, 27106835 - 27106754
Alignment:
Q  66 ttccatatactttgttttggttgcttgattatcccttactcgacacatcaagtttgttattggtgtgatttttcaacgaatt 147  Q
    ||||||| |||||||||||||||||||| |||||||| ||| ||||||||||||||||||||||||| ||| ||| ||||||    
T  27106835 ttccatacactttgttttggttgcttgactatcccttgctccacacatcaagtttgttattggtgtgttttctcatcgaatt 27106754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 181816 - 181901
Alignment:
Q  1 ttcttttgtgttctctcttcctttctctctcgctgttttttacttttgggttgtgtttataattgttccatatactttgttttggttg 88  Q
    |||||||||||||||||||| ||||||||  | |||||| ||||||||| ||||||||||||||||| |||| |||||||||||||||    
T  181816 ttcttttgtgttctctcttcttttctctc--gttgttttctacttttggcttgtgtttataattgtttcatacactttgttttggttg 181901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 7 - 158
Target Start/End: Complemental strand, 2468122 - 2467975
Alignment:
Q  7 tgtgttctctcttcctttctctctcgctgttttttacttttgggttgtgtttataattgttccatatactttgttttggttgcttgattatcccttactc 106  Q
    ||||||||||||| |||| ||||||| |||||| || |||||  ||||| |||||| |  ||| || |||||||||||||||||||| |||| ||| |||    
T  2468122 tgtgttctctctttcttt-tctctcgttgttttctaattttgttttgtgattataact--tccctacactttgttttggttgcttgactatcacttgctc 2468026  T
Q  107 gacacatcaagtttgttattggtgtgatttttcaacgaattcgctacaattt 158  Q
     ||||||||||||| |||||||||||| |||||| ||||||| | |||||||    
T  2468025 cacacatcaagtttattattggtgtga-ttttcatcgaattcacaacaattt 2467975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 34 - 156
Target Start/End: Complemental strand, 22684611 - 22684489
Alignment:
Q  34 tgttttttacttttgggttgtgtttataattgttccatatactttg-ttttggttgcttgattatcccttactcgacacatcaagtttgttattggtgtg 132  Q
    |||||| ||||||||| |||| ||||  ||||||||||| |||||| |||||||||| |||||||||||| ||| |||||||||| ||||||||||||||    
T  22684611 tgttttctacttttggcttgtattta--attgttccataaactttgattttggttgcctgattatcccttgctccacacatcaag-ttgttattggtgtg 22684515  T
Q  133 attttt--caacgaattcgctacaat 156  Q
    ||||||  || ||||||||| |||||    
T  22684514 attttttccatcgaattcgcaacaat 22684489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 34 - 137
Target Start/End: Original strand, 4424395 - 4424496
Alignment:
Q  34 tgttttttacttttgggttgtgtttataattgttccatatactttgtttt-ggttgcttgattatcccttactcgacacatcaagtttgttattggtgtg 132  Q
    |||||| ||||||||| |||| ||||  ||||||||||| |||||||||| ||||||||||||||||||| ||| ||||| |||| ||||||||||||||    
T  4424395 tgttttctacttttggcttgtattta--attgttccatacactttgtttttggttgcttgattatcccttgctccacacaccaag-ttgttattggtgtg 4424491  T
Q  133 atttt 137  Q
    |||||    
T  4424492 atttt 4424496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 34 - 138
Target Start/End: Original strand, 43082350 - 43082451
Alignment:
Q  34 tgttttttacttttgggttgtgtttataattgttccatatactttgttttggttgcttgattatcccttactcgacacatcaagtttgttattggtgtga 133  Q
    |||||| ||||||||| |||| ||||||| | |  |||| |||||||||||||||||| |||||||||| ||| |||||||||| |||||||||||||||    
T  43082350 tgttttctacttttggcttgtatttataacttt--catacactttgttttggttgcttaattatcccttgctccacacatcaag-ttgttattggtgtga 43082446  T
Q  134 ttttt 138  Q
    |||||    
T  43082447 ttttt 43082451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 135
Target Start/End: Original strand, 1225504 - 1225626
Alignment:
Q  1 ttcttttgtgttctctcttcctttctctctcgctgttttttacttttgggttgtgtttataattgttccatatactttgttttggttgcttgattatccc 100  Q
    |||||||||||||||||||| ||||||  |||||||||| ||||||||  |||||||||||||||          |||||||||||||||||||||| ||    
T  1225504 ttcttttgtgttctctcttcttttctc--tcgctgttttctacttttgacttgtgtttataattg----------tttgttttggttgcttgattattcc 1225591  T
Q  101 ttactcgacacatcaagtttgttattggtgtgatt 135  Q
    ||  || ||||||||||| ||||||||| ||||||    
T  1225592 ttgttccacacatcaagtatgttattggcgtgatt 1225626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 60 - 155
Target Start/End: Original strand, 32339710 - 32339804
Alignment:
Q  60 taattgttccatatactttg-ttttggttgcttgattatcccttactcgacacatcaagtttgttattggtgtgatttttcaacgaattcgctacaa 155  Q
    ||||||||||||| |||||| ||||||||||||||||||||||| | | |||||||||| ||||||||||||||| |||||| ||||||||| ||||    
T  32339710 taattgttccatacactttgattttggttgcttgattatcccttgccccacacatcaag-ttgttattggtgtga-ttttcatcgaattcgcaacaa 32339804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 7 - 157
Target Start/End: Original strand, 21480845 - 21480993
Alignment:
Q  7 tgtgttctctcttcctttctctctcgctgttttttacttttgggttgtgtttataattgttccatatactttgtttt--ggttgcttgattatcccttac 104  Q
    ||||||||||||| |||| ||||||| |||||| | ||||||  ||||| |||||| |  |||||| ||||||||||  ||||| |||||| || |||||    
T  21480845 tgtgttctctctttcttt-tctctcgttgttttcttcttttgt-ttgtgattataact--tccatacactttgttttttggttgtttgattgtcacttac 21480940  T
Q  105 tcgacacatcaagtttgttattggtgtgatttttcaacgaattcgctacaatt 157  Q
    || ||||||||||||| |||||||||| |||||||| ||||||| | ||||||    
T  21480941 tccacacatcaagtttattattggtgttatttttcatcgaattcacaacaatt 21480993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 34 - 138
Target Start/End: Complemental strand, 5372147 - 5372042
Alignment:
Q  34 tgttttttacttttgggttgtgtttataattgttccatatactttg-ttttggttgcttgattatcccttactcgacacatcaagtttgttattggtgtg 132  Q
    |||||| ||||||||| ||| |||||||| ||||||||| | |||  |||| ||||||||| ||||| || ||| |||||||||||||||||||| ||||    
T  5372147 tgttttctacttttggcttgagtttataactgttccatacattttaattttagttgcttgaatatccattgctccacacatcaagtttgttattgatgtg 5372048  T
Q  133 attttt 138  Q
    ||||||    
T  5372047 attttt 5372042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 80 - 148
Target Start/End: Complemental strand, 24873112 - 24873045
Alignment:
Q  80 ttttggttgcttgattatcccttactcgacacatcaagtttgttattggtgtgatttttcaacgaattc 148  Q
    |||||||||||| |||||||||| ||| |||||||||| |||||||||||||||||||||| |||||||    
T  24873112 ttttggttgcttaattatcccttgctccacacatcaag-ttgttattggtgtgatttttcatcgaattc 24873045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 26 - 137
Target Start/End: Original strand, 31162574 - 31162683
Alignment:
Q  26 tctctcgctgttttttacttttgggttgtgtttataattgttccatatactttgttttggttgcttgattatcccttactcgacacatcaagtttgttat 125  Q
    ||||||| |||||| ||||||||| |||| ||||||| |  |||||| |||||||||||||| ||| |||||  ||| ||| ||||||||||| | ||||    
T  31162574 tctctcgttgttttctacttttggcttgtatttataact--tccatacactttgttttggttacttaattattacttgctccacacatcaagtattttat 31162671  T
Q  126 tggtgtgatttt 137  Q
    ||||||||||||    
T  31162672 tggtgtgatttt 31162683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 69 - 138
Target Start/End: Original strand, 43080012 - 43080080
Alignment:
Q  69 catatactttgttttggttgcttgattatcccttactcgacacatcaagtttgttattggtgtgattttt 138  Q
    |||| |||||||||||||||||| ||||||| || ||| |||||||||| ||||||||||||||||||||    
T  43080012 catacactttgttttggttgcttaattatccattgctccacacatcaag-ttgttattggtgtgattttt 43080080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 34 - 137
Target Start/End: Original strand, 609112 - 609214
Alignment:
Q  34 tgttttttacttttgggttgtgtttataattgttccatatactttgtttt--ggttgcttgattatcccttactcgacacatcaagtttgttattggtgt 131  Q
    |||||| ||||||||| |||| ||||  |||||| |||| ||||||||||  ||||||||||||||| ||| ||| || ||||||| ||||||||||||     
T  609112 tgttttctacttttggcttgtattta--attgtttcatacactttgttttttggttgcttgattatctcttgctccacgcatcaag-ttgttattggtgc 609208  T
Q  132 gatttt 137  Q
    ||||||    
T  609209 gatttt 609214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 90 - 148
Target Start/End: Original strand, 183246 - 183304
Alignment:
Q  90 ttgattatcccttactcgacacatcaagtttgttattggtgtgatttttcaacgaattc 148  Q
    |||| |||||||| ||| ||||||||||||||||||||||||| ||| ||| |||||||    
T  183246 ttgactatcccttgctccacacatcaagtttgttattggtgtgttttctcatcgaattc 183304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 66 - 137
Target Start/End: Complemental strand, 3005572 - 3005502
Alignment:
Q  66 ttccatatactttgttttggttgcttgattatcccttactcgacacatcaagtttgttattggtgtgatttt 137  Q
    ||||||| ||||||||| ||||| ||||||||  ||| ||| ||||||||||| | ||||||||||||||||    
T  3005572 ttccatacactttgttt-ggttgtttgattattacttgctccacacatcaagtattttattggtgtgatttt 3005502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 108 - 148
Target Start/End: Original strand, 16833978 - 16834018
Alignment:
Q  108 acacatcaagtttgttattggtgtgatttttcaacgaattc 148  Q
    ||||||||||| | |||||||||||| ||||||||||||||    
T  16833978 acacatcaagtattttattggtgtgacttttcaacgaattc 16834018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 108 - 148
Target Start/End: Original strand, 17847956 - 17847996
Alignment:
Q  108 acacatcaagtttgttattggtgtgatttttcaacgaattc 148  Q
    ||||||||||| | ||||||||||||||||| |||||||||    
T  17847956 acacatcaagtattttattggtgtgattttttaacgaattc 17847996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 106; Significance: 4e-53; HSPs: 70)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 1 - 138
Target Start/End: Original strand, 2724174 - 2724311
Alignment:
Q  1 ttcttttgtgttctctcttcctttctctctcgctgttttttacttttgggttgtgtttataattgttccatatactttgttttggttgcttgattatccc 100  Q
    |||||||||||||||||||||||| ||| |||||||||| ||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||    
T  2724174 ttcttttgtgttctctcttcctttttctttcgctgttttctacttttggcttgtgtttataattgttccatacactttgttttggttgcttgattatccc 2724273  T
Q  101 ttactcgacacatcaagtttgttattggtgtgattttt 138  Q
    || ||  |||||||||||||||||||||||||||||||    
T  2724274 ttgctatacacatcaagtttgttattggtgtgattttt 2724311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 1 - 137
Target Start/End: Complemental strand, 17818490 - 17818352
Alignment:
Q  1 ttcttttgtgttctctcttcctttctctctc--gctgttttttacttttgggttgtgtttataattgttccatatactttgttttggttgcttgattatc 98  Q
    |||||||||||||||| ||||||||||||||  |||||||| ||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||     
T  17818490 ttcttttgtgttctcttttcctttctctctctcgctgttttctacttttggcttgtgtttataattgttccatacactttgttttggttgcttgattatt 17818391  T
Q  99 ccttactcgacacatcaagtttgttattggtgtgatttt 137  Q
    |||| ||| ||||||||||||||||||||||||| ||||    
T  17818390 ccttgctccacacatcaagtttgttattggtgtggtttt 17818352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 9 - 148
Target Start/End: Complemental strand, 41585725 - 41585586
Alignment:
Q  9 tgttctctcttcctttctctctcgctgttttttacttttgggttgtgtttataattgttccatatactttgttttggttgcttgattatcccttactcga 108  Q
    |||||| ||||| ||||||||||| |||||| ||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||| ||| | | |    
T  41585725 tgttctatcttcttttctctctcgttgttttctacttttggcttgtgtttataattgttccatacactttgttttggttgcttgattatctcttgcccca 41585626  T
Q  109 cacatcaagtttgttattggtgtgatttttcaacgaattc 148  Q
    |||||||||||||||||||||||||||||||| |||||||    
T  41585625 cacatcaagtttgttattggtgtgatttttcatcgaattc 41585586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 1 - 157
Target Start/End: Complemental strand, 26098286 - 26098126
Alignment:
Q  1 ttcttttgtgttctctcttcctttctctctc--gctgttttttacttttgggttgtgtttataattgttccatatactttgttttggttgcttgattatc 98  Q
    ||||||| |||||||||||||||||||||||  |||||||| ||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||     
T  26098286 ttcttttatgttctctcttcctttctctctctcgctgttttctacttttggcttgtgtttataattgttccatacactttgttttggttgcttgattatt 26098187  T
Q  99 ccttactcgacacatcaagtttgttattggtgtga--tttttcaacgaattcgctacaatt 157  Q
    |||| ||| |||||||||||||| |||||||||||  ||| ||| ||||||||| ||||||    
T  26098186 ccttgctccacacatcaagtttgatattggtgtgagttttctcatcgaattcgcaacaatt 26098126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 1 - 148
Target Start/End: Complemental strand, 1189605 - 1189460
Alignment:
Q  1 ttcttttgtgttctctcttcctttctctctcgctgttttttacttttgggttgtgtttataattgttccatatactttgttttggttgcttgattatccc 100  Q
    ||||||||||||||||||||||||||||||||| ||||| ||||||||| |||||||||||||||||||||| | ||||||||||| |||||||||| ||    
T  1189605 ttcttttgtgttctctcttcctttctctctcgcagttttctacttttggcttgtgtttataattgttccatacattttgttttggtggcttgattattcc 1189506  T
Q  101 ttactcgacacatcaagtttgttattggtgtgatttttcaacgaattc 148  Q
    || ||| |||||||||||||| ||||||||||  |||||| |||||||    
T  1189505 ttgctccacacatcaagtttgatattggtgtg--ttttcatcgaattc 1189460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 1 - 155
Target Start/End: Complemental strand, 31465987 - 31465832
Alignment:
Q  1 ttcttttgtgttctctcttcctttctctctcgctgttttttacttttgggttgtgtttataattgttccatatactttg-ttttggttgcttgattatcc 99  Q
    ||||||||| |||||||||| |||||||||||||||||| ||||||||| |||||||||||||||||||||| |||||| |||||||||||| ||||| |    
T  31465987 ttcttttgtattctctcttcttttctctctcgctgttttctacttttggcttgtgtttataattgttccatacactttgattttggttgcttaattattc 31465888  T
Q  100 cttactcgacacatcaagtttgttattggtgtgatttttcaacgaattcgctacaa 155  Q
    |||  || ||||||||| ||||||||||||||||||||||| | ||||||| ||||    
T  31465887 cttgttccacacatcaaatttgttattggtgtgatttttcatcaaattcgcaacaa 31465832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 10 - 137
Target Start/End: Complemental strand, 37705771 - 37705644
Alignment:
Q  10 gttctctcttcctttctctctcgctgttttttacttttgggttgtgtttataattgttccatatactttgttttggttgcttgattatcccttactcgac 109  Q
    |||||||||||||||||||||||||||||| ||||||||| |||||||| ||||| ||||||||||||||||||||||||||| |||| |||| ||| ||    
T  37705771 gttctctcttcctttctctctcgctgttttctacttttggcttgtgtttttaattattccatatactttgttttggttgcttggttattccttgctccac 37705672  T
Q  110 acatcaagtttgttattggtgtgatttt 137  Q
    ||||||||||||||||||||||| ||||    
T  37705671 acatcaagtttgttattggtgtggtttt 37705644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 2 - 150
Target Start/End: Original strand, 6756774 - 6756923
Alignment:
Q  2 tcttttgtgttctctcttcctttctctctcgctgttttttacttttgggttgtgtttataattgttccatatactttgttttggttgcttgattatccct 101  Q
    ||||||||||||||||||| |||||||||||||||||| ||||||||| ||||||||||||||||| |||| ||||||||||| |||| |||||||| ||    
T  6756774 tcttttgtgttctctcttcttttctctctcgctgttttctacttttggcttgtgtttataattgtttcatacactttgttttgattgcctgattatcact 6756873  T
Q  102 tactcgacacatcaag-tttgttattggtgtgatttttcaacgaattcgc 150  Q
    | ||| |||||||||| ||||||||||||||| ||| ||| |||||||||    
T  6756874 tgctccacacatcaagttttgttattggtgtgttttctcatcgaattcgc 6756923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 1 - 146
Target Start/End: Complemental strand, 10474321 - 10474176
Alignment:
Q  1 ttcttttgtgttctctcttcctttctctctcgctgttttttacttttgggttgtgtttataattgttccatatactttgttttggttgcttgattatccc 100  Q
    ||||||||||||||||||||||||||||||||||  ||| ||||||| | |||||||||||||||||||||| |||||||||||||| ||||||||| ||    
T  10474321 ttcttttgtgttctctcttcctttctctctcgctaatttctacttttcgcttgtgtttataattgttccatacactttgttttggttacttgattattcc 10474222  T
Q  101 ttactcgacacatcaagtttgttattggtgtgatttttcaacgaat 146  Q
    || ||| ||||||||||||| |||||| ||| |||||||| |||||    
T  10474221 ttgctccacacatcaagtttattattgatgtaatttttcatcgaat 10474176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 24 - 140
Target Start/End: Original strand, 40221833 - 40221949
Alignment:
Q  24 tctctctcgctgttttttacttttgggttgtgtttataattgttccatatactttgttttggttgcttgattatcccttactcgacacatcaagtttgtt 123  Q
    |||||||||||||||| ||||||||| |||||||||||||||||||||| |||||||||||||||||||| ||||| || ||| ||||||||||||||||    
T  40221833 tctctctcgctgttttctacttttggcttgtgtttataattgttccatacactttgttttggttgcttgactatcctttgctccacacatcaagtttgtt 40221932  T
Q  124 attggtgtgatttttca 140  Q
    |||||||||||||||||    
T  40221933 attggtgtgatttttca 40221949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 1 - 150
Target Start/End: Original strand, 39854764 - 39854917
Alignment:
Q  1 ttcttttgtgttctctcttcctttctctctcgctgtt---ttttacttttgggttgtgtttataattgttccatatactttgtttt-ggttgcttgatta 96  Q
    |||||||||||||||||||||||| ||||||||||||   |||||||||||| |||||||||||||||||||||| ||||| |||| |||||||| | ||    
T  39854764 ttcttttgtgttctctcttcctttttctctcgctgttgttttttacttttggcttgtgtttataattgttccatacactttatttttggttgcttaacta 39854863  T
Q  97 tcccttactcgacacatcaagtttgttattggtgtgatttttcaacgaattcgc 150  Q
    |||||| ||| ||| ||||||||| ||||||||||||||||||| |||||||||    
T  39854864 tcccttgctccacatatcaagtttattattggtgtgatttttcatcgaattcgc 39854917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 1 - 157
Target Start/End: Complemental strand, 18511210 - 18511053
Alignment:
Q  1 ttcttttgtgttctctcttcctttctctctc-gctgttttttacttttgggttgtgtttataattgttccatatactttgttttggttgcttgattatcc 99  Q
    |||||||||||||||||||| |||||||| | | |||||| ||||||| | ||||||||||||||||| |||| |||||||||| ||||||||| |||||    
T  18511210 ttcttttgtgttctctcttcttttctctcgctgttgttttctactttttgcttgtgtttataattgtttcatacactttgttttagttgcttgactatcc 18511111  T
Q  100 cttactcgacacatcaagtttgttattggtgtgatttttcaacgaattcgctacaatt 157  Q
    ||| ||| |||||||||||||||||||| |||||||| ||| ||||||||| ||||||    
T  18511110 cttgctccacacatcaagtttgttattgatgtgatttatcatcgaattcgcaacaatt 18511053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 1 - 156
Target Start/End: Complemental strand, 36402326 - 36402168
Alignment:
Q  1 ttcttttgtgttctctcttcctttctctctcgctgtttttt---acttttgggttgtgtttataattgttccatatactttg-ttttggttgcttgatta 96  Q
    |||||||||||||||||||| ||| |||||||||||| |||   |||||| | |||||||||||||||||| ||| |||||| |||||||||| ||||||    
T  36402326 ttcttttgtgttctctcttctttt-tctctcgctgttgttttctacttttagcttgtgtttataattgttctatacactttgattttggttgcctgatta 36402228  T
Q  97 tcccttactcgacacatcaagtttgttattggtgtgatttttcaacgaattcgctacaat 156  Q
    |||||| ||| ||||||||||||||||||||||||||||||||| ||||||||| |||||    
T  36402227 tcccttgctccacacatcaagtttgttattggtgtgatttttcatcgaattcgcaacaat 36402168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 1 - 148
Target Start/End: Complemental strand, 16092197 - 16092051
Alignment:
Q  1 ttcttttgtgttctctcttcctttctctctcgctgttttttacttttgggttgtgtttataattgttccatatactttgttttggttgcttgattatccc 100  Q
    |||||||||||||||||||| |||||||||||||||||| ||||||||| ||| ||||| ||||||||||||||||||| ||||||||||||| |||||     
T  16092197 ttcttttgtgttctctcttcttttctctctcgctgttttctacttttggcttgcgtttacaattgttccatatactttg-tttggttgcttgactatcca 16092099  T
Q  101 ttactcgacacatcaagtttgttattggtgtgatttttcaacgaattc 148  Q
    || ||| ||| ||||||||||||||||||| | ||| ||| |||||||    
T  16092098 ttgctccacatatcaagtttgttattggtgcgttttctcatcgaattc 16092051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 1 - 150
Target Start/End: Original strand, 21948307 - 21948464
Alignment:
Q  1 ttcttttgtgttctctcttcctttctc------tctcgctgttttttacttttgggttgtgtttataattgttccatatactttgtttt--ggttgcttg 92  Q
    |||||||||||||||||||||||||||      ||||||| |||| ||||||||| |||||||||||||||||||||| ||||| ||||  |||||||||    
T  21948307 ttcttttgtgttctctcttcctttctccctctctctcgctattttctacttttggcttgtgtttataattgttccatacactttattttttggttgcttg 21948406  T
Q  93 attatcccttactcgacacatcaagtttgttattggtgtgatttttcaacgaattcgc 150  Q
    |||||||||| ||| ||||||||||||||||||||||||| ||| ||| |||||||||    
T  21948407 attatcccttgctccacacatcaagtttgttattggtgtgttttctcatcgaattcgc 21948464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 4 - 155
Target Start/End: Original strand, 25904387 - 25904537
Alignment:
Q  4 ttttgtgttctctcttcctttctctctcgctgttttttacttttgggttgtgtttataattgttccatatactttgttttggttgcttgattatccctta 103  Q
    |||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||| ||||||||||  |||||||| ||||||||     
T  25904387 ttttgtgttctctcttcctttctctctcgctgttttctacttttggtttgtgtttataattgttccatacactttgttttcattgcttgactatcccttg 25904486  T
Q  104 ctcgacacatcaagtttgttattggtgtgatttttcaacgaattcgctacaa 155  Q
    | | ||||||||| ||| ||| ||||||| ||| ||| ||||||||| ||||    
T  25904487 caccacacatcaaatttatta-tggtgtgttttctcatcgaattcgcaacaa 25904537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 26098012 - 26098127
Alignment:
Q  1 ttcttttgtgttctctcttcctttctctctcgctgttttttacttttgggttgtgtttataattgttccatatactttgttttggttgcttgattatccc 100  Q
    |||||||||||||||||||||||||| |||||||||||| ||||||||| | |||||||||||||||||||| |||||||||||||||||||| ||||||    
T  26098012 ttcttttgtgttctctcttcctttctatctcgctgttttctacttttggctagtgtttataattgttccatacactttgttttggttgcttgactatccc 26098111  T
Q  101 ttactcgacacatcaa 116  Q
    || ||| |||||||||    
T  26098112 ttgctccacacatcaa 26098127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 1 - 148
Target Start/End: Original strand, 21289042 - 21289187
Alignment:
Q  1 ttcttttgtgttctctcttcctttctctctcgctgttttttacttttgggttgtgtttataattgttccatatactttgttttggttgcttgattatccc 100  Q
    ||||||||| |||||||||  ||  ||||||| |||||| ||||||||| |||||||||| ||| ||||||| |||||||||||||||||||| ||||||    
T  21289042 ttcttttgttttctctctt--ttgttctctcgttgttttctacttttggcttgtgtttattattcttccatacactttgttttggttgcttgactatccc 21289139  T
Q  101 ttactcgacacatcaagtttgttattggtgtgatttttcaacgaattc 148  Q
    || ||| |||||||||||||| |||||||||||||||||| |||||||    
T  21289140 ttgctccacacatcaagtttgatattggtgtgatttttcatcgaattc 21289187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 32 - 148
Target Start/End: Complemental strand, 34530681 - 34530565
Alignment:
Q  32 gctgttttttacttttgggttgtgtttataattgttccatatactttgttttggttgcttgattatcccttactcgacacatcaagtttgttattggtgt 131  Q
    |||||| | ||||||||  ||||||||||||||||||||||  |||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||    
T  34530681 gctgttgtctacttttgacttgtgtttataattgttccatacgctttgttttggttgcttgattatcacttgctcgacacatcaagtttgttattggtgt 34530582  T
Q  132 gatttttcaacgaattc 148  Q
    ||||||||| |||||||    
T  34530581 gatttttcatcgaattc 34530565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 148
Target Start/End: Original strand, 2954697 - 2954843
Alignment:
Q  1 ttcttttgtgttctctcttcctttctctctcgctgttttttacttttgggttgtgttt-ataattgttccatatactttgttttggttgcttgattatcc 99  Q
    |||||||||||||||||||| ||||||||  |||||||| ||||||||| |||||||  |||||||||||||| |||||||||||||||  ||||||||     
T  2954697 ttcttttgtgttctctcttcttttctctc--gctgttttctacttttggcttgtgttacataattgttccatacactttgttttggttgtctgattatca 2954794  T
Q  100 cttactcgacacatcaagtttgttattggtgtgatttttcaacgaattc 148  Q
    ||||||| ||||||||| ||||||||||||||| ||| ||| |||||||    
T  2954795 cttactccacacatcaaatttgttattggtgtgttttctcatcgaattc 2954843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 1 - 132
Target Start/End: Original strand, 20043271 - 20043402
Alignment:
Q  1 ttcttttgtgttctctcttcctttctctctcgctgttttttacttttgggttgtgtttataattgttccatatactttgttttggttgcttga-ttatcc 99  Q
    ||||||||||||||||||| |||| |||||||||||||| ||||||||| |||||||||||||||||||||| |||||||||||| ||||||| |||||     
T  20043271 ttcttttgtgttctctctttcttt-tctctcgctgttttctacttttggcttgtgtttataattgttccatacactttgttttggctgcttgatttatca 20043369  T
Q  100 cttactcgacacatcaagtttgttattggtgtg 132  Q
    ||| ||| ||| |||||||||||||||| ||||    
T  20043370 cttgctccacaaatcaagtttgttattgatgtg 20043402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 1 - 148
Target Start/End: Original strand, 24127137 - 24127285
Alignment:
Q  1 ttcttttgtgttctctcttcctttctctctcgctgttttttacttttgggttgtgtttataattgttccatatactttg-ttttggttgcttgattatcc 99  Q
    ||||||||||||||||||| |||||||||||| |||||| ||||||||  || |||||||||||||| |||| |||||| |||| ||||  |||||||||    
T  24127137 ttcttttgtgttctctctttctttctctctcgttgttttctacttttgacttatgtttataattgtttcatacactttgttttttgttgtctgattatcc 24127236  T
Q  100 cttactcgacacatcaagtttgttattggtgtgatttttcaacgaattc 148  Q
    ||| ||| |||||| |||||||||||| ||||||||||||| |||||||    
T  24127237 cttgctccacacattaagtttgttatttgtgtgatttttcatcgaattc 24127285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 1 - 148
Target Start/End: Original strand, 36208857 - 36209001
Alignment:
Q  1 ttcttttgtgttctctcttcctttctctctcgctgttttttacttttgggttgtgtttataattgttccatatactttgttttggttgcttgattatccc 100  Q
    ||||||||| ||||||||| |||||||||  | |||||| ||||||||| ||||| |||||||||||| ||| ||||||||||||||||||||||||| |    
T  36208857 ttcttttgt-ttctctctttctttctctc--gttgttttctacttttggcttgtgattataattgttctatacactttgttttggttgcttgattatcac 36208953  T
Q  101 ttactcgacacatcaagtttgttattggtgtgatttttcaacgaattc 148  Q
    || ||| ||||||||||||| |||||| |||||||||||| |||||||    
T  36208954 ttgctctacacatcaagtttattattgatgtgatttttcatcgaattc 36209001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 150
Target Start/End: Complemental strand, 658354 - 658208
Alignment:
Q  1 ttcttttgtgttctctcttcctttctctctcgctgttttttacttttgggttgtgtttataattgttccatatactttgttttggttgcttgattatccc 100  Q
    |||||||||||||||||||| |||||||   |||||||| ||||||||| || ||||||| |||||||| || |||||||||||||||| ||||||| ||    
T  658354 ttcttttgtgttctctcttcttttctctt--gctgttttctacttttggcttatgtttattattgttccgtacactttgttttggttgcctgattattcc 658257  T
Q  101 ttactcgacacatcaagtttgttattggtgtgatttttcaacgaattcgc 150  Q
    || ||| ||||||||| |||||||||||||||| |||||| |||||||||    
T  658256 ttgctccacacatcaaatttgttattggtgtga-ttttcatcgaattcgc 658208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 14 - 139
Target Start/End: Complemental strand, 12555898 - 12555773
Alignment:
Q  14 tctcttcctttctctctcgctgttttttacttttgggttgtgtttataattgttccatatactttgttttggttgcttgattatcccttactcgacacat 113  Q
    ||||||| ||||||||||| |||||| ||||||||| ||||| ||||||||||| |||| ||||| |||||||||||||||||| |||| ||| ||||||    
T  12555898 tctcttcttttctctctcgttgttttctacttttggcttgtgattataattgtttcatacactttattttggttgcttgattattccttgctccacacat 12555799  T
Q  114 caagtttgttattggtgtgatttttc 139  Q
    ||| |||||||||||||||| |||||    
T  12555798 caaatttgttattggtgtgagttttc 12555773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 1 - 146
Target Start/End: Complemental strand, 2818333 - 2818186
Alignment:
Q  1 ttcttttgtgttctctcttcctttctctctcgctgtttttt---acttttgggttgtgtttataattgttccatatactttg-ttttggttgcttgatta 96  Q
    |||||||||||||||||||| ||| |||||||||||| |||   |||||||| |||||||||||||||||||||| |||||| |||||| ||| ||||||    
T  2818333 ttcttttgtgttctctcttctttt-tctctcgctgttgttttctacttttggcttgtgtttataattgttccatacactttgattttggatgcctgatta 2818235  T
Q  97 tcccttactcgacacatcaagtttgttattggtgtgatttttcaacgaat 146  Q
    |||||| ||| | ||||||||||||||||||||||| ||||||| |||||    
T  2818234 tcccttgctccatacatcaagtttgttattggtgtg-tttttcatcgaat 2818186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 26 - 129
Target Start/End: Original strand, 20045292 - 20045395
Alignment:
Q  26 tctctcgctgttttttacttttgggttgtgtttataattgttccatatactttgttttggttgcttgattatcccttactcgacacatcaagtttgttat 125  Q
    ||||||| |||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||  || ||  ||||||||||||||||||    
T  20045292 tctctcgttgttttttacttttggcttgtgtttataattgttccatacactttgttttggttgcttgattatcatttgcttcacacatcaagtttgttat 20045391  T
Q  126 tggt 129  Q
    ||||    
T  20045392 tggt 20045395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 1 - 156
Target Start/End: Original strand, 6747585 - 6747745
Alignment:
Q  1 ttcttttgtgttctct-cttcctttctctctc-gctgttttttacttttgggttgtgtttataattgttccatatactttgt---tttggttgcttgatt 95  Q
    |||||||||||||||| |||| |||||||| | | ||||||  |||||||| |||||||||||||||||||||| |||||||   |||||||||||||||    
T  6747585 ttcttttgtgttctcttcttcttttctctcgctgttgttttcgacttttggcttgtgtttataattgttccatacactttgtgtttttggttgcttgatt 6747684  T
Q  96 atcccttactcgacacatcaagtttgttattggtgtgatttttcaacgaattcgctacaat 156  Q
    ||| ||| ||| ||||||||||||||||||||||||| ||| ||| | ||||||| |||||    
T  6747685 atctcttgctctacacatcaagtttgttattggtgtgttttctcatccaattcgcaacaat 6747745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 26 - 147
Target Start/End: Original strand, 18596951 - 18597072
Alignment:
Q  26 tctctcgctgttttttacttttgggttgtgtttataattgttccatatactttgttttggttgcttgattatcccttactcgacacatcaagtttgttat 125  Q
    |||||||||||||| ||||||||  |||||||||||||||||||||| ||||| |||||| ||  |||||||| ||| ||| | ||||||||||||||||    
T  18596951 tctctcgctgttttctacttttgacttgtgtttataattgttccatacactttattttggatgtctgattatcacttgctccatacatcaagtttgttat 18597050  T
Q  126 tggtgtgatttttcaacgaatt 147  Q
    ||||||||||||||| ||||||    
T  18597051 tggtgtgatttttcatcgaatt 18597072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 34 - 148
Target Start/End: Original strand, 18469330 - 18469442
Alignment:
Q  34 tgttttttacttttgggttgtgtttataattgttccatatactttgttttggttgcttgattatcccttactcgacacatcaagtttgttattggtgtga 133  Q
    |||||| ||||||||| |||| ||||||| |  |||||| ||||||||||||||||||||||||||||| ||| |||||||||||||||||||||| |||    
T  18469330 tgttttctacttttggcttgtatttataact--tccatacactttgttttggttgcttgattatcccttgctccacacatcaagtttgttattggtatga 18469427  T
Q  134 tttttcaacgaattc 148  Q
    ||||||| |||||||    
T  18469428 tttttcatcgaattc 18469442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 34 - 148
Target Start/End: Original strand, 27912857 - 27912969
Alignment:
Q  34 tgttttttacttttgggttgtgtttataattgttccatatactttgttttggttgcttgattatcccttactcgacacatcaagtttgttattggtgtga 133  Q
    |||||| ||||||| | |||| ||||||| |  |||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||    
T  27912857 tgttttctacttttagcttgtatttataact--tccatacactttgttttggttgcttgattatcccttactccacacatcaagtttgttattggtggga 27912954  T
Q  134 tttttcaacgaattc 148  Q
    ||||||| |||||||    
T  27912955 tttttcatcgaattc 27912969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 1 - 157
Target Start/End: Original strand, 6745349 - 6745510
Alignment:
Q  1 ttcttttgtgttctctcttcctttctctctcgctgtttttt---acttttgggttgtgtttataattgttccatatactttgtttt---ggttgcttgat 94  Q
    ||||||||||||||||  | |||| |||||||||||| |||   |||||||| |||||||||||||||||||||| ||||||||||   || |||||||     
T  6745349 ttcttttgtgttctcttattcttt-tctctcgctgttgttttcgacttttggcttgtgtttataattgttccatacactttgtttttttggctgcttgac 6745447  T
Q  95 tatcccttactcgacacatcaagtttgttattggtgtgatttttcaacgaattcgctacaatt 157  Q
    |||| ||| ||| ||||||||||||||||||||||||| ||| ||| ||||||||| ||||||    
T  6745448 tatctcttgctccacacatcaagtttgttattggtgtgttttctcatcgaattcgcaacaatt 6745510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 148
Target Start/End: Original strand, 16776438 - 16776588
Alignment:
Q  1 ttcttttgtgttctctct-tcctttctctctcgctgtttttt---acttttgggttgtgtttataattgttccatatactttgttttggttgcttgatta 96  Q
    ||||||||||||||| || | |||| |||||||||||| |||   |||||||| |||| || ||||||||| |||| ||||||||||| |||| ||||||    
T  16776438 ttcttttgtgttctcgctcttctttttctctcgctgttgttttctacttttggcttgtatt-ataattgtttcatacactttgttttgattgcctgatta 16776536  T
Q  97 tcccttactcgacacatcaagtttgttattggtgtgatttttcaacgaattc 148  Q
    | |||| ||| |||||||||||||||||||||||||||||||||| ||||||    
T  16776537 ttccttgctccacacatcaagtttgttattggtgtgatttttcaatgaattc 16776588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 34 - 157
Target Start/End: Original strand, 18467005 - 18467126
Alignment:
Q  34 tgttttttacttttgggttgtgtttataattgttccatatactttgttttggttgcttgattatcccttactcgacacatcaagtttgttattggtgtga 133  Q
    |||||| ||||||||| |||| ||||||| |  |||||| ||||||||||| ||||||||||||||||| ||| ||||||||||||||||||| ||||||    
T  18467005 tgttttctacttttggcttgtatttataact--tccatacactttgttttgattgcttgattatcccttgctccacacatcaagtttgttattagtgtga 18467102  T
Q  134 tttttcaacgaattcgctacaatt 157  Q
    ||||||| ||||||| | ||||||    
T  18467103 tttttcatcgaattcacaacaatt 18467126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 115
Target Start/End: Complemental strand, 18509316 - 18509201
Alignment:
Q  1 ttcttttgtgttctctcttcctttctctctc-gctgttttttacttttgggttgtgtttataattgttccatatactttgttttggttgcttgattatcc 99  Q
    |||||||||||||||||||| |||||||| | | |||||| ||||||||| ||||||||||||||||| |||| ||||||||||||||| |||| |||||    
T  18509316 ttcttttgtgttctctcttcttttctctcgctgttgttttctacttttggcttgtgtttataattgtttcatacactttgttttggttgtttgactatcc 18509217  T
Q  100 cttactcgacacatca 115  Q
    ||| ||| ||||||||    
T  18509216 cttgctccacacatca 18509201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 157
Target Start/End: Complemental strand, 20505841 - 20505684
Alignment:
Q  1 ttcttttgtgttctctcttcctttctctctcgctgttttttacttttgggttgtgtttataattgttccatatactttg---ttttggttgcttgattat 97  Q
    |||||||||||||||||||  ||||||||  | |||||| || |||||| |||||||||||||||||||||| ||||||   |||||||||| |||||||    
T  20505841 ttcttttgtgttctctcttattttctctc--gttgttttctagttttggcttgtgtttataattgttccatacactttgattttttggttgcctgattat 20505744  T
Q  98 cccttactcgacacatcaagtttgttattggtgtgatttttcaacgaattcgctacaatt 157  Q
      ||| ||| ||||||||||||||||||||||||| ||| |||  |||||| | ||||||    
T  20505743 tacttgctccacacatcaagtttgttattggtgtgttttctcattgaattcacaacaatt 20505684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 34 - 150
Target Start/End: Complemental strand, 38960089 - 38959976
Alignment:
Q  34 tgttttttacttttgggttgtgtttataattgttccatatactttgttttggttgcttgattatcccttactcgacacatcaagtttgttattggtgtga 133  Q
    |||||| ||||||||| |||| ||||||| | |  |||| ||||||||||||||||||||||||||||| ||| |||||||||| |||||||||||||||    
T  38960089 tgttttctacttttggcttgtatttataacttt--catacactttgttttggttgcttgattatcccttgctccacacatcaag-ttgttattggtgtga 38959993  T
Q  134 tttttcaacgaattcgc 150  Q
    ||||||| |||||||||    
T  38959992 tttttcatcgaattcgc 38959976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 34 - 156
Target Start/End: Original strand, 39798351 - 39798470
Alignment:
Q  34 tgttttttacttttgggttgtgtttataattgttccatatactttgttttggttgcttgattatcccttactcgacacatcaagtttgttattggtgtga 133  Q
    |||||| ||||||||| |||| ||||||| | |  |||| ||||||||||||||||||||||||||||| ||| |||||||||  |||||||||||||||    
T  39798351 tgttttctacttttggcttgtatttataacttt--catacactttgttttggttgcttgattatcccttgctccacacatcaa-attgttattggtgtga 39798447  T
Q  134 tttttcaacgaattcgctacaat 156  Q
    ||||||| ||||||||| |||||    
T  39798448 tttttcatcgaattcgcaacaat 39798470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 34 - 157
Target Start/End: Original strand, 25804345 - 25804466
Alignment:
Q  34 tgttttttacttttgggttgtgtttataattgttccatatactttgttttggttgcttgattatcccttactcgacacatcaagtttgttattggtgtga 133  Q
    |||||| ||||||||| |||| ||||  ||||||||||| ||||||||||||||||||||||||| ||| ||| |||||||||| |||||||||||||||    
T  25804345 tgttttctacttttggcttgtattta--attgttccatacactttgttttggttgcttgattatctcttgctccacacatcaag-ttgttattggtgtga 25804441  T
Q  134 t-ttttcaacgaattcgctacaatt 157  Q
    | |||||| ||||| ||| ||||||    
T  25804442 tattttcatcgaatacgcaacaatt 25804466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 34 - 150
Target Start/End: Original strand, 38882409 - 38882521
Alignment:
Q  34 tgttttttacttttgggttgtgtttataattgttccatatactttgttttggttgcttgattatcccttactcgacacatcaagtttgttattggtgtga 133  Q
    |||||| ||||||||| |||| ||||  ||||||||||| ||||||||||||||||||||||||| ||| ||| |||||||||| |||||||||||||||    
T  38882409 tgttttctacttttggcttgtattta--attgttccatacactttgttttggttgcttgattatctcttgctccacacatcaag-ttgttattggtgtga 38882505  T
Q  134 tttttcaacgaattcgc 150  Q
     |||||| |||||||||    
T  38882506 -ttttcatcgaattcgc 38882521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 34 - 157
Target Start/End: Original strand, 27910754 - 27910875
Alignment:
Q  34 tgttttttacttttgggttgtgtttataattgttccatatactttgttttggttgcttgattatcccttactcgacacatcaagtttgttattggtgtga 133  Q
    |||||| ||||||| | |||| ||||||| |  |||||| ||||| ||||||||| ||||||||||||| ||| ||||||||| ||||||||||||||||    
T  27910754 tgttttatacttttagcttgtatttataact--tccatacactttattttggttgattgattatcccttgctccacacatcaaatttgttattggtgtga 27910851  T
Q  134 tttttcaacgaattcgctacaatt 157  Q
    ||||||| ||||||| | ||||||    
T  27910852 tttttcatcgaattcacaacaatt 27910875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 41 - 148
Target Start/End: Complemental strand, 31179323 - 31179219
Alignment:
Q  41 tacttttgggttgtgtttataattgttccatatactttgttttggttgcttgattatcccttactcgacacatcaagtttgttattggtgtgatttttca 140  Q
    ||||||||| |||||||||  ||| ||||||| |||||||||||||||||| |||||||||| ||| | |||||||| ||||||||||||||||||||||    
T  31179323 tacttttggcttgtgttta--attattccatacactttgttttggttgcttaattatcccttgctccatacatcaag-ttgttattggtgtgatttttca 31179227  T
Q  141 acgaattc 148  Q
     |||||||    
T  31179226 tcgaattc 31179219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 34 - 156
Target Start/End: Complemental strand, 34477011 - 34476892
Alignment:
Q  34 tgttttttacttttgggttgtgtttataattgttccatatactttg-ttttggttgcttgattatcccttactcgacacatcaagtttgttattggtgtg 132  Q
    |||||| ||||||||| |||| ||||  ||||||||||| |||||| ||||||||||||||||||||||| ||| |||||||||| ||||||||||||||    
T  34477011 tgttttctacttttggcttgtattta--attgttccatacactttgattttggttgcttgattatcccttgctccacacatcaag-ttgttattggtgtg 34476915  T
Q  133 atttttcaacgaattcgctacaat 156  Q
    | |||||| ||||||||| |||||    
T  34476914 a-ttttcatcgaattcgcaacaat 34476892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 34 - 148
Target Start/End: Original strand, 4236949 - 4237059
Alignment:
Q  34 tgttttttacttttgggttgtgtttataattgttccatatactttgttttggttgcttgattatcccttactcgacacatcaagtttgttattggtgtga 133  Q
    |||||| ||||||||| |||| ||||  ||||||||||| ||||||||||||||||||||||||| ||| ||  |||||||||| |||||||||||||||    
T  4236949 tgttttctacttttggcttgtattta--attgttccatacactttgttttggttgcttgattatctcttgcttcacacatcaag-ttgttattggtgtga 4237045  T
Q  134 tttttcaacgaattc 148  Q
     ||||||||||||||    
T  4237046 -ttttcaacgaattc 4237059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 131
Target Start/End: Original strand, 17073165 - 17073298
Alignment:
Q  1 ttcttttgtgttctctcttcctttctctctcgctgtttttt---acttttgggttgtgtttataattgttccatatactttgttttggttgcttgattat 97  Q
    ||||||||  |||||||||  ||| |||||||||||| |||   |||||||  |||||||||||||||||||||| |||||||||| |||||||||| ||    
T  17073165 ttcttttgctttctctctttatttttctctcgctgttgttttctacttttgacttgtgtttataattgttccatacactttgttttagttgcttgatcat 17073264  T
Q  98 cccttactcgacacatcaagtttgttattggtgt 131  Q
    | ||| ||| ||||||||| ||| ||||||||||    
T  17073265 cacttgctccacacatcaaatttattattggtgt 17073298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 34 - 148
Target Start/End: Complemental strand, 25921431 - 25921321
Alignment:
Q  34 tgttttttacttttgggttgtgtttataattgttccatatactttgttttggttgcttgattatcccttactcgacacatcaagtttgttattggtgtga 133  Q
    |||||| ||||||||| |||| ||||  ||||||||||| ||||| ||||||||||||||||||||||| ||| |||||||||| |||||||||||||||    
T  25921431 tgttttctacttttggcttgtattta--attgttccatacactttattttggttgcttgattatcccttgctccacacatcaag-ttgttattggtgtga 25921335  T
Q  134 tttttcaacgaattc 148  Q
     || |||||||||||    
T  25921334 -ttctcaacgaattc 25921321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 60 - 150
Target Start/End: Complemental strand, 21684386 - 21684298
Alignment:
Q  60 taattgttccatatactttgttttggttgcttgattatcccttactcgacacatcaagtttgttattggtgtgatttttcaacgaattcgc 150  Q
    ||||||||||||| ||||||||||| ||||||||||||||||| ||| |||||||||| ||||||||||||||| |||||| |||||||||    
T  21684386 taattgttccatacactttgttttgattgcttgattatcccttgctccacacatcaag-ttgttattggtgtga-ttttcatcgaattcgc 21684298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 34 - 138
Target Start/End: Original strand, 2175222 - 2175323
Alignment:
Q  34 tgttttttacttttgggttgtgtttataattgttccatatactttgttttggttgcttgattatcccttactcgacacatcaagtttgttattggtgtga 133  Q
    |||||| ||||||||| |||| ||||  |||||| |||| ||||||||||||||||||||||||||||| ||| |||||||||| |||||||||||||||    
T  2175222 tgttttctacttttggcttgtattta--attgtttcatacactttgttttggttgcttgattatcccttgctccacacatcaag-ttgttattggtgtga 2175318  T
Q  134 ttttt 138  Q
     ||||    
T  2175319 ctttt 2175323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 31 - 155
Target Start/End: Original strand, 4410340 - 4410459
Alignment:
Q  31 cgctgttttttacttttgggttgtgtttataattgttccatatactttgttttggttgcttgattatcccttactcgacacatcaagtttgttattggtg 130  Q
    ||||||||| ||||||||| |||| ||||||| |  |||||| || || ||||||||||||||||||||||| ||| |||||||||| ||||||||||||    
T  4410340 cgctgttttctacttttggcttgtatttataact--tccatacacctt-ttttggttgcttgattatcccttgctccacacatcaag-ttgttattggtg 4410435  T
Q  131 tgatttttcaacgaattcgctacaa 155  Q
    ||| |||||||||||||||| ||||    
T  4410436 tga-ttttcaacgaattcgcaacaa 4410459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 4 - 137
Target Start/End: Original strand, 696162 - 696292
Alignment:
Q  4 ttttgtgttctctcttcctttctctctcgctgttttttacttttgggttgtgtttataattgttccatatactttgttttggttg-cttgattatccctt 102  Q
    |||||||||||||||| |||||||| |   |||||| ||||||||  |||||||||||| ||||||||| ||||| ||||||||  |||||||||| |||    
T  696162 ttttgtgttctctctttctttctctgt---tgttttctacttttgt-ttgtgtttataactgttccatacactttattttggttttcttgattatctctt 696257  T
Q  103 actcgacacatcaagtttgttattggtgtgatttt 137  Q
     ||| ||||||||||| |||||||||| |||||||    
T  696258 gctccacacatcaagtctgttattggtatgatttt 696292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 34 - 148
Target Start/End: Complemental strand, 3373095 - 3372983
Alignment:
Q  34 tgttttttacttttgggttgtgtttataattgttccatatactttg-ttttggttgcttgattatcccttactcgacacatcaagtttgttattggtgtg 132  Q
    |||||| ||||||||| |||| ||||  |||||||||||  ||||| |||||||||||| |||||||||| ||| |||||||||| ||||||||||||||    
T  3373095 tgttttctacttttggcttgtattta--attgttccatacgctttgattttggttgcttaattatcccttgctccacacatcaag-ttgttattggtgtg 3372999  T
Q  133 atttttcaacgaattc 148  Q
    |||||||| |||||||    
T  3372998 atttttcatcgaattc 3372983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 34 - 137
Target Start/End: Original strand, 10587136 - 10587236
Alignment:
Q  34 tgttttttacttttgggttgtgtttataattgttccatatactttgttttggttgcttgattatcccttactcgacacatcaagtttgttattggtgtga 133  Q
    |||||| ||||||||  |||| ||||||| |  |||||| |||||||||||||||||||||||||| || ||| ||||||||||||||||||||||||||    
T  10587136 tgttttctacttttgacttgtatttataact--tccatacactttgttttggttgcttgattatcc-ttgctccacacatcaagtttgttattggtgtga 10587232  T
Q  134 tttt 137  Q
    ||||    
T  10587233 tttt 10587236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 60 - 137
Target Start/End: Complemental strand, 34479352 - 34479275
Alignment:
Q  60 taattgttccatatactttg-ttttggttgcttgattatcccttactcgacacatcaagtttgttattggtgtgatttt 137  Q
    ||||||||||||| |||||| ||||||||||||||||||||||| ||| |||||||||| |||||||||||||||||||    
T  34479352 taattgttccatacactttgattttggttgcttgattatcccttgctccacacatcaag-ttgttattggtgtgatttt 34479275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 138
Target Start/End: Original strand, 20054118 - 20054251
Alignment:
Q  1 ttcttttgtgttctctcttcctttctctctcgctgttttttacttttgggttgtgtttataattgttccatatactttgttttggttgcttgattatccc 100  Q
    ||||||||||||||||||| |||| ||||||   ||||| ||||||||  |||||||||||| | |  |||| ||||||||||||||||||||||||  |    
T  20054118 ttcttttgtgttctctctttcttt-tctctcttcgttttctacttttgt-ttgtgtttataacttt--catacactttgttttggttgcttgattattac 20054213  T
Q  101 ttactcgacacatcaagtttgttattggtgtgattttt 138  Q
    || ||| ||||||||||| | ||||| |||||||||||    
T  20054214 ttgctctacacatcaagtattttattagtgtgattttt 20054251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 34 - 137
Target Start/End: Complemental strand, 10529056 - 10528955
Alignment:
Q  34 tgttttttacttttgggttgtgtttataattgttccatatactttg-ttttggttgcttgattatcccttactcgacacatcaagtttgttattggtgtg 132  Q
    |||||| ||||||||| |||| ||||  ||||||||||| |||||| |||||||||| |||||||||||| ||  |||||||||| ||||||||||||||    
T  10529056 tgttttctacttttggcttgtattta--attgttccatacactttgattttggttgcctgattatcccttgcttcacacatcaag-ttgttattggtgtg 10528960  T
Q  133 atttt 137  Q
    |||||    
T  10528959 atttt 10528955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 34 - 137
Target Start/End: Original strand, 10750020 - 10750121
Alignment:
Q  34 tgttttttacttttgggttgtgtttataattgttccatatactttg-ttttggttgcttgattatcccttactcgacacatcaagtttgttattggtgtg 132  Q
    |||||| ||||||||| |||| ||||  |||||||||||  ||||| |||||||||||| |||||||||| ||| |||||||||| ||||||||||||||    
T  10750020 tgttttctacttttggcttgtattta--attgttccatacgctttgattttggttgcttaattatcccttgctccacacatcaag-ttgttattggtgtg 10750116  T
Q  133 atttt 137  Q
    |||||    
T  10750117 atttt 10750121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 34 - 137
Target Start/End: Original strand, 10757496 - 10757597
Alignment:
Q  34 tgttttttacttttgggttgtgtttataattgttccatatactttg-ttttggttgcttgattatcccttactcgacacatcaagtttgttattggtgtg 132  Q
    |||||| ||||||||| |||| ||||  |||||||||||  ||||| |||||||||||| |||||||||| ||| |||||||||| ||||||||||||||    
T  10757496 tgttttctacttttggcttgtattta--attgttccatacgctttgattttggttgcttaattatcccttgctccacacatcaag-ttgttattggtgtg 10757592  T
Q  133 atttt 137  Q
    |||||    
T  10757593 atttt 10757597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 34 - 135
Target Start/End: Original strand, 31543055 - 31543153
Alignment:
Q  34 tgttttttacttttgggttgtgtttataattgttccatatactttgttttggttgcttgattatcccttactcgacacatcaagtttgttattggtgtga 133  Q
    |||||| ||||||||| |||| ||||||| | |  ||||  |||||||||||||||||||||| ||||| ||| |||||||||| |||||||||||||||    
T  31543055 tgttttctacttttggcttgtatttataacttt--catacgctttgttttggttgcttgattaacccttgctccacacatcaag-ttgttattggtgtga 31543151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 80 - 157
Target Start/End: Complemental strand, 15356763 - 15356687
Alignment:
Q  80 ttttggttgcttgattatcccttactcgacacatcaagtttgttattggtgtgatttttcaacgaattcgctacaatt 157  Q
    |||||||||||| |||||||||| ||| |||||||||| |||||||||||||||||||||  ||||||| | ||||||    
T  15356763 ttttggttgcttaattatcccttgctccacacatcaag-ttgttattggtgtgatttttcgtcgaattcacaacaatt 15356687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 69 - 138
Target Start/End: Original strand, 15552600 - 15552668
Alignment:
Q  69 catatactttgttttggttgcttgattatcccttactcgacacatcaagtttgttattggtgtgattttt 138  Q
    |||| |||||||||| |||||||||||||||||||||  || ||||||| ||||||||||||||||||||    
T  15552600 catacactttgttttagttgcttgattatcccttacttcacgcatcaag-ttgttattggtgtgattttt 15552668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 80 - 157
Target Start/End: Original strand, 23665411 - 23665487
Alignment:
Q  80 ttttggttgcttgattatcccttactcgacacatcaagtttgttattggtgtgatttttcaacgaattcgctacaatt 157  Q
    |||||||||||| |||||||||| ||| |||||||||| |||||||||||||||||||||  ||||||| | ||||||    
T  23665411 ttttggttgcttaattatcccttgctccacacatcaag-ttgttattggtgtgatttttcgtcgaattcacaacaatt 23665487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 80 - 157
Target Start/End: Complemental strand, 23793176 - 23793100
Alignment:
Q  80 ttttggttgcttgattatcccttactcgacacatcaagtttgttattggtgtgatttttcaacgaattcgctacaatt 157  Q
    |||||||||||| |||||||||| ||| |||||||||| |||||||||||||||||||||  ||||||| | ||||||    
T  23793176 ttttggttgcttaattatcccttgctccacacatcaag-ttgttattggtgtgatttttcgtcgaattcacaacaatt 23793100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #63
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 77 - 157
Target Start/End: Complemental strand, 31472536 - 31472455
Alignment:
Q  77 ttgttttggttgcttgattatcccttactcgacacatcaagtttgttattggtgtg-atttttcaacgaattcgctacaatt 157  Q
    |||| |||||||||||| |||| ||||||  |||||||||||||||||| |||||| |||||||| ||||||||| ||||||    
T  31472536 ttgtattggttgcttgagtatctcttacttcacacatcaagtttgttatcggtgtgtatttttcatcgaattcgcaacaatt 31472455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #64
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 23 - 88
Target Start/End: Complemental strand, 39397981 - 39397916
Alignment:
Q  23 ttctctctcgctgttttttacttttgggttgtgtttataattgttccatatactttgttttggttg 88  Q
    ||||||||| ||||||| ||||||||| ||| ||||||||||||| |||| |||||||||||||||    
T  39397981 ttctctctcactgttttctacttttggcttgagtttataattgtttcatacactttgttttggttg 39397916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #65
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 80 - 148
Target Start/End: Complemental strand, 15354487 - 15354420
Alignment:
Q  80 ttttggttgcttgattatcccttactcgacacatcaagtttgttattggtgtgatttttcaacgaattc 148  Q
    |||||||||||| |||||||||| ||| |||||||||| |||||||||||||||||||||  |||||||    
T  15354487 ttttggttgcttaattatcccttgctccacacatcaag-ttgttattggtgtgatttttcgtcgaattc 15354420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #66
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 80 - 148
Target Start/End: Complemental strand, 23741770 - 23741703
Alignment:
Q  80 ttttggttgcttgattatcccttactcgacacatcaagtttgttattggtgtgatttttcaacgaattc 148  Q
    |||||||||||| |||||||||| ||| |||||||||| |||||||||||||||||||||  |||||||    
T  23741770 ttttggttgcttaattatcccttgctccacacatcaag-ttgttattggtgtgatttttcgtcgaattc 23741703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #67
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 7 - 138
Target Start/End: Complemental strand, 2144561 - 2144437
Alignment:
Q  7 tgtgttctctcttcctttctctctcgctgttttttacttttgggttgtgtttataattgttccatatactttgttttggttgcttgattatcccttactc 106  Q
    ||||||||||||| |||||||||  |||||||| ||||||| | |||||||||||||||||  |   || ||||||| |||||||||||||   ||||||    
T  2144561 tgtgttctctctttctttctctc--gctgttttctactttt-gcttgtgtttataattgtt--acccacattgttttagttgcttgattat--tttactc 2144469  T
Q  107 gacacatcaagtttgttattggtgtgattttt 138  Q
     |||||| |||| | |||||||||||||||||    
T  2144468 cacacataaagtattttattggtgtgattttt 2144437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #68
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 7 - 158
Target Start/End: Original strand, 15143754 - 15143900
Alignment:
Q  7 tgtgttctctcttcctttctctctcgctgttttttacttttgggttgtgtttataattgttccatatactttgttttggttgcttgattatcccttactc 106  Q
    |||||||||||| | |||||||| |  | |||| ||||||| | ||||||||||||||||||||  |   |  | |||||||||||||||  | ||||||    
T  15143754 tgtgttctctctacttttctctcgctattttttctactttttgtttgtgtttataattgttccacgt---taatattggttgcttgatta--ctttactc 15143848  T
Q  107 gacacatcaagtttgttattggtgtgatttttcaacgaattcgctacaattt 158  Q
     ||||||||| | | |||||||| |||||||||||||||||| | |||||||    
T  15143849 cacacatcaattattttattggtatgatttttcaacgaattcacaacaattt 15143900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #69
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 26 - 137
Target Start/End: Complemental strand, 6661161 - 6661053
Alignment:
Q  26 tctctcgctgttttttacttttgggttgtgtttataattgttccatatactttgttttggttgcttgattatcccttactcgacacatcaagtttgttat 125  Q
    ||||||| |||||| ||||||||  |||||||||||| |  |||||| ||||| ||||||||||||||||||  ||| ||| ||||||||| | | | ||    
T  6661161 tctctcgttgttttctacttttgc-ttgtgtttataact--tccatacactttattttggttgcttgattattacttgctccacacatcaaatatttaat 6661065  T
Q  126 tggtgtgatttt 137  Q
    ||||||||||||    
T  6661064 tggtgtgatttt 6661053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #70
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 34 - 135
Target Start/End: Original strand, 31545404 - 31545502
Alignment:
Q  34 tgttttttacttttgggttgtgtttataattgttccatatactttgttttggttgcttgattatcccttactcgacacatcaagtttgttattggtgtga 133  Q
    |||||| ||||||||| |||| ||||||| | |  ||||  |||| ||||  ||||||||||| ||||||||| |||||||||| |||||||||||||||    
T  31545404 tgttttctacttttggcttgtatttataacttt--catacgctttattttaattgcttgattaacccttactccacacatcaag-ttgttattggtgtga 31545500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 106; Significance: 4e-53; HSPs: 85)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 1 - 157
Target Start/End: Original strand, 3314946 - 3315103
Alignment:
Q  1 ttcttttgtgttctctcttcctttctctctcgctgttttttacttttgggttgtgtttataattgttccatatactttg-ttttggttgcttgattatcc 99  Q
    ||||||||||||||||||||||||||||||||||||||| ||| ||||| |||||||||||||||||||||| |||||| ||||||||||||||||||||    
T  3314946 ttcttttgtgttctctcttcctttctctctcgctgttttctacgtttggcttgtgtttataattgttccatacactttgcttttggttgcttgattatcc 3315045  T
Q  100 cttactcgacacatcaagtttgttattggtgtgatttttcaacgaattcgctacaatt 157  Q
    ||| ||| ||||||||||||| ||||||||||| ||| ||| ||||||||| ||||||    
T  3315046 cttgctccacacatcaagtttattattggtgtgttttctcatcgaattcgcaacaatt 3315103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 1 - 157
Target Start/End: Complemental strand, 43423459 - 43423305
Alignment:
Q  1 ttcttttgtgttctctcttcctttctctctcgctgttttttacttttgggttgtgtttataattgttccatatactttgttttggttgcttgattatccc 100  Q
    |||||||||||||||||||| ||||||||  |||||||| ||||||||| |||||||||||||||||||||| |||||||||||||||||||| ||||||    
T  43423459 ttcttttgtgttctctcttcttttctctc--gctgttttctacttttggcttgtgtttataattgttccatacactttgttttggttgcttgactatccc 43423362  T
Q  101 ttactcgacacatcaagtttgttattggtgtgatttttcaacgaattcgctacaatt 157  Q
    || ||| ||||||||| |||||||||||||| |||||||| ||||||||| ||||||    
T  43423361 ttgctccacacatcaactttgttattggtgtaatttttcatcgaattcgcaacaatt 43423305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 1 - 148
Target Start/End: Complemental strand, 32264034 - 32263887
Alignment:
Q  1 ttcttttgtgttctctcttcctttctctctcgctgttttttacttttgggttgtgtttataattgttccatatactttgttttggttgcttgattatccc 100  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||| |||||||||||||||  |||||||| |    
T  32264034 ttcttttgtgttctctcttcctttctctctcgctgttttctacttttggcttgtgtttataattgttccatacactttgttttggttgtctgattatcac 32263935  T
Q  101 ttactcgacacatcaagtttgttattggtgtgatttttcaacgaattc 148  Q
    || ||| ||||||||| ||||||||| ||||||||||||  |||||||    
T  32263934 ttgctccacacatcaaatttgttattagtgtgatttttcttcgaattc 32263887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 1 - 137
Target Start/End: Complemental strand, 1626679 - 1626543
Alignment:
Q  1 ttcttttgtgttctctcttcctttctctctcgctgttttttacttttgggttgtgtttataattgttccatatactttgttttggttgcttgattatccc 100  Q
    |||||||||||||||||||||||||||||||| ||||||| |||||||  |||||||||||||||||||||| |||||||||| ||||||||||||| ||    
T  1626679 ttcttttgtgttctctcttcctttctctctcgttgtttttcacttttgacttgtgtttataattgttccatacactttgtttttgttgcttgattattcc 1626580  T
Q  101 ttactcgacacatcaagtttgttattggtgtgatttt 137  Q
    || ||| ||||||||||||||||||||||||| ||||    
T  1626579 ttgctccacacatcaagtttgttattggtgtggtttt 1626543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 1 - 156
Target Start/End: Complemental strand, 43421411 - 43421258
Alignment:
Q  1 ttcttttgtgttctctcttcctttctctctcgctgttttttacttttgggttgtgtttataattgttccatatactttgttttggttgcttgattatccc 100  Q
    |||||||||||||||||||| ||||||||  |||||||| ||||||||| |||||||||||||||||||||| |||||||||||||||||||| |||  |    
T  43421411 ttcttttgtgttctctcttcttttctctc--gctgttttatacttttggcttgtgtttataattgttccatacactttgttttggttgcttgactatatc 43421314  T
Q  101 ttactcgacacatcaagtttgttattggtgtgatttttcaacgaattcgctacaat 156  Q
    || ||| ||||||||| ||||||||||||||||||||||| ||||||||| |||||    
T  43421313 ttgctccacacatcaactttgttattggtgtgatttttcatcgaattcgcaacaat 43421258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 1 - 137
Target Start/End: Complemental strand, 27635654 - 27635515
Alignment:
Q  1 ttcttttgtgttctctcttcctttct---ctctcgctgttttttacttttgggttgtgtttataattgttccatatactttgttttggttgcttgattat 97  Q
    ||||||||||||||||||||  ||||   ||||||||||||| ||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||    
T  27635654 ttcttttgtgttctctcttctcttcttttctctcgctgttttctacttttggcttgtgtttataattgttccatacactttgttttggttgcttgattat 27635555  T
Q  98 cccttactcgacacatcaagtttgttattggtgtgatttt 137  Q
     |||| ||| ||||||||||||||||||||||||||||||    
T  27635554 tccttgctccacacatcaagtttgttattggtgtgatttt 27635515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 1 - 157
Target Start/End: Complemental strand, 53917660 - 53917503
Alignment:
Q  1 ttcttttgtgttctctcttcctttctctctc-gctgttttttacttttgggttgtgtttataattgttccatatactttgttttggttgcttgattatcc 99  Q
    |||||||||||||||||||| |||||||| | | |||||| ||||||||| ||||||||||||||||| |||| |||||||||||||||||||| |||||    
T  53917660 ttcttttgtgttctctcttcttttctctcgctgttgttttctacttttggcttgtgtttataattgtttcatacactttgttttggttgcttgactatcc 53917561  T
Q  100 cttactcgacacatcaagtttgttattggtgtgatttttcaacgaattcgctacaatt 157  Q
    ||| ||| ||||||||||||||||||| ||||||||||||| ||| ||||| ||||||    
T  53917560 cttgctccacacatcaagtttgttattagtgtgatttttcatcgatttcgcaacaatt 53917503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 1 - 150
Target Start/End: Original strand, 1313670 - 1313818
Alignment:
Q  1 ttcttttgtgttctctcttcctttctctctcgctgttttttacttttgggttgtgtttataattgttccatatactttgttttggttgcttgattatccc 100  Q
    |||||||||||||||||||| ||||||||  | |||||| ||||||||  |||||||||||||||||||||| |||||||||||||||||||| ||||||    
T  1313670 ttcttttgtgttctctcttcttttctctc--gttgttttctacttttgacttgtgtttataattgttccatacactttgttttggttgcttgactatccc 1313767  T
Q  101 ttactcgacacatcaagtttgttattggtgtga-tttttcaacgaattcgc 150  Q
    || ||| |||||||||||||||||||||||||| ||||||| |||||||||    
T  1313768 ttgctccacacatcaagtttgttattggtgtgagtttttcatcgaattcgc 1313818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 1 - 150
Target Start/End: Complemental strand, 18096896 - 18096744
Alignment:
Q  1 ttcttttgtgttctctcttcctttctctctcgctgtttttt---acttttgggttgtgtttataattgttccatatactttg-ttttggttgcttgatta 96  Q
    |||||||||||||||||||| |||||||||||||||| |||   |||||||| |||||||||||||||||||||| |||||| |||||||||| ||||||    
T  18096896 ttcttttgtgttctctcttc-tttctctctcgctgttgttttctacttttggcttgtgtttataattgttccatacactttgattttggttgcctgatta 18096798  T
Q  97 tcccttactcgacacatcaagtttgttattggtgtgatttttcaacgaattcgc 150  Q
    |||||| ||| |||||||||||||||||||||||| |||||||| |||||||||    
T  18096797 tcccttgctccacacatcaagtttgttattggtgtaatttttcatcgaattcgc 18096744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 1 - 150
Target Start/End: Original strand, 36012088 - 36012239
Alignment:
Q  1 ttcttttgtgttctctcttcctttctctctcgctgtttttt---acttttgggttgtgtttataattgttccatatactttgttttggttgcttgattat 97  Q
    |||||||||||||||||||| ||| |||||||||||| |||   |||||| | |||||||||||||||||||||| ||||||||||||||| ||||||||    
T  36012088 ttcttttgtgttctctcttctttt-tctctcgctgttgttttctacttttcgcttgtgtttataattgttccatacactttgttttggttgtttgattat 36012186  T
Q  98 cccttactcgacacatcaagtttgttattggtgtgatttttcaacgaattcgc 150  Q
    ||||| ||| | ||||||||||||||||||||||||||||||| |||||||||    
T  36012187 cccttgctccatacatcaagtttgttattggtgtgatttttcatcgaattcgc 36012239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 1 - 150
Target Start/End: Complemental strand, 53915492 - 53915342
Alignment:
Q  1 ttcttttgtgttctctcttcctttctctctc-gctgttttttacttttgggttgtgtttataattgttccatatactttgttttggttgcttgattatcc 99  Q
    |||||||||||||||||||| |||||||| | | |||||| ||||||||| ||||||||||||||||| |||| |||| ||||||||||||||| |||||    
T  53915492 ttcttttgtgttctctcttcttttctctcgctgttgttttctacttttggcttgtgtttataattgtttcatacacttggttttggttgcttgactatcc 53915393  T
Q  100 cttactcgacacatcaagtttgttattggtgtgatttttcaacgaattcgc 150  Q
    ||| ||| | ||||||||||||||||||||||||||||||| |||||||||    
T  53915392 cttgctccatacatcaagtttgttattggtgtgatttttcatcgaattcgc 53915342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 1 - 140
Target Start/End: Complemental strand, 12267971 - 12267833
Alignment:
Q  1 ttcttttgtgttctctcttcctttctctctcgctgttttttacttttgggttgtgtttataattgttccatatactttgttttggttgcttgattatccc 100  Q
    |||||||||||||||||||| ||||||||||| |||||| ||||||||| |||||||||||||||||||||| |||||||||||||||||||| ||| ||    
T  12267971 ttcttttgtgttctctcttc-tttctctctcgttgttttctacttttggcttgtgtttataattgttccatacactttgttttggttgcttgactattcc 12267873  T
Q  101 ttactcgacacatcaagtttgttattggtgtgatttttca 140  Q
     | ||| ||||||||| |||||||||||||| ||||||||    
T  12267872 ctgctccacacatcaaatttgttattggtgtaatttttca 12267833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 1 - 148
Target Start/End: Original strand, 15781140 - 15781287
Alignment:
Q  1 ttcttttgtgttctctcttcctttctctctcgctgttttttacttttgggttgtgtttataattgttccatatactttgttttggttgcttgattatccc 100  Q
    ||||||||| |||||||||| ||||||||||| |||||| ||||||||  |||||||||||| ||||||||| ||||| |||||  ||||||||||||||    
T  15781140 ttcttttgttttctctcttcttttctctctcgttgttttctacttttgacttgtgtttataactgttccatacactttattttgcctgcttgattatccc 15781239  T
Q  101 ttactcgacacatcaagtttgttattggtgtgatttttcaacgaattc 148  Q
    |||||| ||||||||||||||||||||||||| |||| || |||||||    
T  15781240 ttactccacacatcaagtttgttattggtgtgtttttccatcgaattc 15781287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 7 - 138
Target Start/End: Original strand, 28181271 - 28181401
Alignment:
Q  7 tgtgttctctcttcctttctctctcgctgttttttacttttgggttgtgtttataattgttccatatactttgttttggttgcttgattatcccttactc 106  Q
    |||||||||||||| ||||||| |||||||||| ||||||||| |||||||||||||||||||||| ||||||||||||||| |||||| | |||| |||    
T  28181271 tgtgttctctcttcttttctctgtcgctgttttctacttttggcttgtgtttataattgttccatacactttgttttggttgtttgattgt-ccttgctc 28181369  T
Q  107 gacacatcaagtttgttattggtgtgattttt 138  Q
     |||||||||||||||||||||||||||||||    
T  28181370 cacacatcaagtttgttattggtgtgattttt 28181401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 1 - 139
Target Start/End: Original strand, 4666775 - 4666913
Alignment:
Q  1 ttcttttgtgttctctcttcctttctctctcgctgttttttacttttgggttgtgtttataattgttccatatactttgttttggttgcttgattatccc 100  Q
    |||||||||||||||||||| |||||||||||||||||| ||||||||| |||| |||||||||||| |||| ||||| |||||||||| |||| ||| |    
T  4666775 ttcttttgtgttctctcttcttttctctctcgctgttttatacttttggtttgtttttataattgtttcatacactttattttggttgcatgataatcac 4666874  T
Q  101 ttactcgacacatcaagtttgttattggtgtgatttttc 139  Q
    |||||| ||||||||| ||| ||||||||||||||||||    
T  4666875 ttactccacacatcaaatttattattggtgtgatttttc 4666913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 1 - 157
Target Start/End: Complemental strand, 18099166 - 18099007
Alignment:
Q  1 ttcttttgtgttctctcttcctttctctctcgctgtttttt---acttttgggttgtgtttataattgttccatatactttg-ttttggttgcttgatta 96  Q
    |||||||||||||||| ||| |||||||||||||||| |||   |||||||| ||||||||| |||||||||||| |||||| |||| ||||||||||||    
T  18099166 ttcttttgtgttctcttttc-tttctctctcgctgttgttttctacttttggcttgtgtttacaattgttccatacactttgatttttgttgcttgatta 18099068  T
Q  97 tcccttactcgacacatcaagtttgttattggtgtgatttttcaacgaattcgctacaatt 157  Q
    |||||| ||| ||||||||||||||||||||||||||||||||| ||||||| | ||||||    
T  18099067 tcccttgctccacacatcaagtttgttattggtgtgatttttcatcgaattcccaacaatt 18099007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 1 - 137
Target Start/End: Complemental strand, 53468449 - 53468313
Alignment:
Q  1 ttcttttgtgttctctcttcctttctctctcgctgttttttacttttgggttgtgtttataattgttccatatactttgttttggttgcttgattatccc 100  Q
    |||||||||||||||||||||||||||||||||| |||| ||||||||  |||||||||||||||||||||| |||||||||||| ||||  ||||| |     
T  53468449 ttcttttgtgttctctcttcctttctctctcgctattttctacttttgacttgtgtttataattgttccatacactttgttttggctgctccattattca 53468350  T
Q  101 ttactcgacacatcaagtttgttattggtgtgatttt 137  Q
    || ||| ||||||||||||||||||||||||| ||||    
T  53468349 ttgctccacacatcaagtttgttattggtgtggtttt 53468313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 5 - 148
Target Start/End: Complemental strand, 5926757 - 5926615
Alignment:
Q  5 tttgtgttctctcttcctttctctctcgctgttttttacttttgggttgtgtttataattgttccatatactttgttttggttgcttgattatcccttac 104  Q
    |||||||||||| ||||||||||||||| |||||| ||||||||  ||||||||||||||||||| || |||||||||||||| ||||||||| ||||||    
T  5926757 tttgtgttctcttttcctttctctctcgttgttttctacttttgc-ttgtgtttataattgttccttacactttgttttggttacttgattattccttac 5926659  T
Q  105 tcgacacatcaagtttgttattggtgtgatttttcaacgaattc 148  Q
    |  |||||| ||||||||||||||||||| |||||| |||||||    
T  5926658 ttcacacatgaagtttgttattggtgtgagttttcatcgaattc 5926615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 1 - 157
Target Start/End: Complemental strand, 28101998 - 28101845
Alignment:
Q  1 ttcttttgtgttctctcttcctttctctctcgctgttttttacttttgggttgtgtttataattgttccatatactttg-ttttggttgcttgattatcc 99  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||  ||||||  | ||  |||||| ||||||||||||||||||||    
T  28101998 ttcttttgtgttctctcttcctttctctctcgctgttttctacttttgggttgtgtt--taattg--ctatccactttgattttggttgcttgattatcc 28101903  T
Q  100 cttactcgacacatcaagtttgttattggtgtgatttttcaacgaattcgctacaatt 157  Q
    ||| ||| ||||||||||||| |||||||||| |||||||| ||||||| | ||||||    
T  28101902 cttgctccacacatcaagtttattattggtgtaatttttcatcgaattcacaacaatt 28101845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 1 - 138
Target Start/End: Original strand, 32219346 - 32219486
Alignment:
Q  1 ttcttttgtgttctctcttcctttctctctcgctgtttttt---acttttgggttgtgtttataattgttccatatactttg-ttttggttgcttgatta 96  Q
    |||||||||||||||||||| ||| |||||||||||| |||   |||||||| |||||||||||||||||||||| |||||| |||||||||||||||||    
T  32219346 ttcttttgtgttctctcttctttt-tctctcgctgttgttttctacttttggcttgtgtttataattgttccatacactttgattttggttgcttgatta 32219444  T
Q  97 tcccttactcgacacatcaagtttgttattggtgtgattttt 138  Q
    |||||| ||| ||||||||||||||||||| |||||||||||    
T  32219445 tcccttgctccacacatcaagtttgttatttgtgtgattttt 32219486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 1 - 147
Target Start/End: Original strand, 45883201 - 45883350
Alignment:
Q  1 ttcttttgtgttctctcttcctttct---ctctcgctgttttttacttttgggttgtgtttataattgttccatatactttgttttggttgcttgattat 97  Q
    ||||||||||||||||||||  ||||   |||| |||||||| ||||| ||| ||||| |||||||||||||||| |||||||||||||||||| | |||    
T  45883201 ttcttttgtgttctctcttctcttcttttctcttgctgttttctacttctggcttgtgattataattgttccatacactttgttttggttgcttaactat 45883300  T
Q  98 cccttactcgacacatcaagtttgttattggtgtgatttttcaacgaatt 147  Q
    ||||| ||| ||||||||||||||||||||||||||||||||| ||||||    
T  45883301 cccttgctccacacatcaagtttgttattggtgtgatttttcatcgaatt 45883350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 1 - 138
Target Start/End: Complemental strand, 880447 - 880312
Alignment:
Q  1 ttcttttgtgttctctcttcctttctctctcgctgttttttacttttgggttgtgtttataattgttccatatactttgttttggttgcttgattatccc 100  Q
    |||||||||||||||||||| ||||||||  |||||||| ||||||||| ||||| |||||| ||||||||| |||||||||||||||||||||||  ||    
T  880447 ttcttttgtgttctctcttcttttctctc--gctgttttctacttttggtttgtgattataactgttccatacactttgttttggttgcttgattaatcc 880350  T
Q  101 ttactcgacacatcaagtttgttattggtgtgattttt 138  Q
    || ||| |||||||||||||||||| ||||||||||||    
T  880349 ttgctccacacatcaagtttgttatgggtgtgattttt 880312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 1 - 156
Target Start/End: Original strand, 6232061 - 6232210
Alignment:
Q  1 ttcttttgtgttctctcttcctttctctctcgctgttttttacttttgggttgtgtttataattgttccatatactttgttttggttgcttgattatccc 100  Q
    |||||||||||||||||||| ||||||||||||||||||||| |||||  |||||||||||||||||||||| ||||| |||||||||||||||||        
T  6232061 ttcttttgtgttctctcttc-tttctctctcgctgttttttatttttgacttgtgtttataattgttccatacactttattttggttgcttgatta---- 6232155  T
Q  101 ttactcgacacatcaagtttgttattggtgtgatttttcaacgaattcgctacaat 156  Q
    |||||| ||||||||| ||||||||| |||||| |||||| ||||||||| |||||    
T  6232156 ttactccacacatcaaatttgttattagtgtga-ttttcatcgaattcgcaacaat 6232210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 4 - 148
Target Start/End: Original strand, 18162927 - 18163074
Alignment:
Q  4 ttttgtgttctctcttcctttctctctcgctg---ttttttacttttgggttgtgtttataattgttccatatactttg-ttttggttgcttgattatcc 99  Q
    ||||||||||||||||| ||| ||||||||||   |||| ||||||||| |||||||||||||||||||||| |||||| |||||||||| |||||||||    
T  18162927 ttttgtgttctctcttctttt-tctctcgctgcagttttctacttttggcttgtgtttataattgttccatacactttgattttggttgcctgattatcc 18163025  T
Q  100 cttactcgacacatcaagtttgttattggtgtgatttttcaacgaattc 148  Q
    ||||||| ||||||||| ||| ||||||||||||||||||| |||||||    
T  18163026 cttactccacacatcaaatttattattggtgtgatttttcatcgaattc 18163074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 1 - 137
Target Start/End: Complemental strand, 51674762 - 51674626
Alignment:
Q  1 ttcttttgtgttctctcttcctttctctctcgctgttttttacttttgggttgtgtttataattgttccatatactttgttttggttgcttgattatccc 100  Q
    |||||||||||||||||||| |||||||||||||||||| ||||||||| ||||||||||| ||||||||||  |  |  ||||||||||||||||| ||    
T  51674762 ttcttttgtgttctctcttcttttctctctcgctgttttctacttttggcttgtgtttatatttgttccatacccacttgtttggttgcttgattattcc 51674663  T
Q  101 ttactcgacacatcaagtttgttattggtgtgatttt 137  Q
    || ||| | ||||||||||||||||||||||||||||    
T  51674662 ttgctccatacatcaagtttgttattggtgtgatttt 51674626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 7 - 140
Target Start/End: Complemental strand, 47148885 - 47148759
Alignment:
Q  7 tgtgttctctcttcctttctctctcgctgttttttacttttgggttgtgtttataattgttccatatactttgttttggttgcttgattatcccttactc 106  Q
    |||||||||||||||||||||||||| |||||| ||||||||  |||||||||||||||||||||| ||||||||||||||| |||||||||||          
T  47148885 tgtgttctctcttcctttctctctcgttgttttctacttttgacttgtgtttataattgttccatacactttgttttggttgtttgattatccc------ 47148792  T
Q  107 gacacatcaagtttgttattggtgtgatttttca 140  Q
     |||||||||||||||||||||||||| ||||||    
T  47148791 -acacatcaagtttgttattggtgtgagttttca 47148759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 148
Target Start/End: Original strand, 3307021 - 3307170
Alignment:
Q  1 ttcttttgtgttctctcttcctttctctctcgctgttttttacttttgggttgtgtttataattgttccatatactttg-ttttggttgcttgattatcc 99  Q
    |||||||||||||||||||||||||||| |||||||||| ||||||||| ||||||||||||||||| |||| |||||| ||||| ||| ||||||||||    
T  3307021 ttcttttgtgttctctcttcctttctctttcgctgttttctacttttggcttgtgtttataattgtttcatacactttgtttttgattgtttgattatcc 3307120  T
Q  100 cttactcgacacatcaag-tttgttattggtgtgatttttcaacgaattc 148  Q
    ||| ||  | |||||||| ||||||||||||||| ||| ||| |||||||    
T  3307121 cttgcttcatacatcaagttttgttattggtgtgttttctcatcgaattc 3307170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 150
Target Start/End: Complemental strand, 880236 - 880088
Alignment:
Q  1 ttcttttgtgttctctcttcctttctctctcgctgttttttacttttgggttgtgtttataattgttccatatactttgttttggttgcttgattatccc 100  Q
    |||||||||||||||||||| ||||||||  | |||||| ||||||||| ||||| |||||| |||| |||| ||||||||||  |||||||||||| ||    
T  880236 ttcttttgtgttctctcttcttttctctc--gttgttttctacttttggtttgtgattataactgtttcatacactttgttttctttgcttgattattcc 880139  T
Q  101 ttactcgacacatcaagtttgttattggtgtga-tttttcaacgaattcgc 150  Q
    |||||| ||||||||||||| |||||||||||| ||||||| |||||||||    
T  880138 ttactccacacatcaagtttattattggtgtgactttttcatcgaattcgc 880088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 138
Target Start/End: Original strand, 6484621 - 6484757
Alignment:
Q  1 ttcttttgtgttctctcttcctttctctctcgctgttttttacttttgggttgtgtttataattgttccatatactttg-ttttggttgcttgattatcc 99  Q
    |||||||||||||||||||   ||||||||||||||||| ||||||||  |||||||||||||||||||||| |||||| |||||||||||| ||||| |    
T  6484621 ttcttttgtgttctctctta--ttctctctcgctgttttctacttttgacttgtgtttataattgttccatacactttgattttggttgcttaattattc 6484718  T
Q  100 cttactcgacacatcaagtttgttattggtgtgattttt 138  Q
    ||| ||| ||||||||| ||||||||| |||||||||||    
T  6484719 cttgctccacacatcaaatttgttattagtgtgattttt 6484757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 148
Target Start/End: Original strand, 24979969 - 24980120
Alignment:
Q  1 ttcttttgtgttctctcttcctttctctctcgctgtttttt----acttttgggttgtgtttataattgttccatatactttg-ttttggttgcttgatt 95  Q
    |||||||||||||||||||| ||| ||||||| |||| |||    |||||||| |||||||||||||||||||||| |||||| |||||||||| |||||    
T  24979969 ttcttttgtgttctctcttctttt-tctctcgttgttgtttttctacttttggcttgtgtttataattgttccatacactttgattttggttgcctgatt 24980067  T
Q  96 atcccttactcgacacatcaagtttgttattggtgtgatttttcaacgaattc 148  Q
    ||||||| ||| ||||||||||||||||||||||||| ||| ||| |||||||    
T  24980068 atcccttgctccacacatcaagtttgttattggtgtgttttctcatcgaattc 24980120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 1 - 130
Target Start/End: Original strand, 39715726 - 39715858
Alignment:
Q  1 ttcttttgtgttctctctt-cctttctctctcgctgttttttacttttgggttgtgtttataattgttccatatactt--tgttttggttgcttgattat 97  Q
    ||||||||||||||||||| |||||||||||||||||||| ||||||||| |||||||||||||||||||||| ||||  | |||| ||| || || |||    
T  39715726 ttcttttgtgttctctctttcctttctctctcgctgttttctacttttggcttgtgtttataattgttccatacactttatttttttgttactagactat 39715825  T
Q  98 cccttactcgacacatcaagtttgttattggtg 130  Q
    ||||||||  |||||||||||||||||||||||    
T  39715826 cccttactgtacacatcaagtttgttattggtg 39715858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 1 - 125
Target Start/End: Original strand, 51943631 - 51943758
Alignment:
Q  1 ttcttttgtgttctctcttcctttct---ctctcgctgttttttacttttgggttgtgtttataattgttccatatactttgttttggttgcttgattat 97  Q
    |||| |||||||||||||||  ||||   ||||||||||||| ||||||||| |||||||||||||||||||| | |||||||||||||||||||| |||    
T  51943631 ttctcttgtgttctctcttctcttcttttctctcgctgttttctacttttggcttgtgtttataattgttccaaacactttgttttggttgcttgactat 51943730  T
Q  98 cccttactcgacacatcaagtttgttat 125  Q
    ||||| ||| ||||||||||||||||||    
T  51943731 cccttgctccacacatcaagtttgttat 51943758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 159
Target Start/End: Original strand, 41849320 - 41849475
Alignment:
Q  1 ttcttttgtgttctctcttccttt-ctctctcgctgttttttacttttgggttgtgtttataattgttccatatactttgttttggttgcttgattatcc 99  Q
    |||||||||||||||||||| ||| |||||||| |||||| ||||||||| |||| ||||||| | |  |||| ||||||||||||||||||||||||||    
T  41849320 ttcttttgtgttctctcttctttttctctctcgttgttttctacttttggcttgtatttataacttt--catacactttgttttggttgcttgattatcc 41849417  T
Q  100 cttactcgacacatcaagtttgttattggtgtgatttttcaacgaattcgctacaatttg 159  Q
    ||| ||| |||||||||| ||||||||||||||| |||||| ||||||||| ||| ||||    
T  41849418 cttgctccacacatcaag-ttgttattggtgtga-ttttcatcgaattcgcaacattttg 41849475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 1 - 150
Target Start/End: Complemental strand, 4308277 - 4308126
Alignment:
Q  1 ttcttttgtgttctctcttcctttctctctcgctgtttttt---acttttgggttgtgtttataattgttccatatactttgttttggttgcttgattat 97  Q
    |||||||||||||||||||| ||| |||||||||||| |||   |||||||| ||||| |||||||||||||||| ||||||||||||||| | ||||||    
T  4308277 ttcttttgtgttctctcttctttt-tctctcgctgttgttttctacttttggcttgtgattataattgttccatacactttgttttggttgttggattat 4308179  T
Q  98 cccttactcgacacatcaagtttgttattggtgtgat-ttttcaacgaattcgc 150  Q
     |||| ||| |||||||||| |||||||||||||||| |||||| |||||||||    
T  4308178 tccttgctccacacatcaag-ttgttattggtgtgatattttcatcgaattcgc 4308126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 6 - 157
Target Start/End: Original strand, 43226349 - 43226498
Alignment:
Q  6 ttgtgttctctcttcctttctctctcgctgtttttt--acttttgggttgtgtttataattgttccatatactttgttttggttgcttgattatccctta 103  Q
    ||||||||||||||||||| |||||||||||| |||  |||||||| |||| ||| ||||||||||||| |||| |||||||||||||||||||| |||     
T  43226349 ttgtgttctctcttccttt-tctctcgctgttgtttctacttttggcttgtattt-taattgttccatacactt-gttttggttgcttgattatctcttg 43226445  T
Q  104 ctcgacacatcaagtttgttattggtgtgatttttcaacgaattcgctacaatt 157  Q
    ||| |||||||||| |||||||||||||||||| ||| ||||||||| ||||||    
T  43226446 ctccacacatcaag-ttgttattggtgtgatttctcatcgaattcgcaacaatt 43226498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 34 - 155
Target Start/End: Original strand, 1321780 - 1321898
Alignment:
Q  34 tgttttttacttttgggttgtgtttataattgttccatatactttgttttggttgcttgattatcccttactcgacacatcaagtttgttattggtgtga 133  Q
    |||||| ||||||||| |||| ||||  ||||||||||| |||||||||||||||| |||||||||||| ||| ||||||||||||||||||||||||||    
T  1321780 tgttttctacttttggcttgtattta--attgttccatacactttgttttggttgcctgattatcccttgctccacacatcaagtttgttattggtgtga 1321877  T
Q  134 tttttcaacgaattcgctacaa 155  Q
     |||||| ||||||||| ||||    
T  1321878 -ttttcatcgaattcgcaacaa 1321898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 1 - 157
Target Start/End: Original strand, 42990565 - 42990720
Alignment:
Q  1 ttcttttgtgttctctcttcctttctctctcgc---tgttttttacttttgggttgtgtttataattgttccatatactttgttttggttgcttgattat 97  Q
    |||||||||||||||||| | ||||| ||||||   |||||| ||||||||| |||| ||||||| |  | |||| |||||||||||||||| |||||||    
T  42990565 ttcttttgtgttctctctccttttct-tctcgccgttgttttctacttttggcttgtatttataact--tacatacactttgttttggttgcctgattat 42990661  T
Q  98 cccttactcgacacatcaagtttgttattggtgtgatttttcaacgaattcgctacaatt 157  Q
    ||||| ||| |||||||||||||||||||||||||| |||||| ||||||||| ||||||    
T  42990662 cccttgctccacacatcaagtttgttattggtgtga-ttttcatcgaattcgcaacaatt 42990720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 1 - 145
Target Start/End: Original strand, 43228552 - 43228696
Alignment:
Q  1 ttcttttgtgttctctcttccttt-ctctctc-gctgttttttacttttgggttgtgtttataattgttccatatactttgttttggttgcttgattatc 98  Q
    |||||||||||||||||||||||| ||||| | | |||||| || |||||| |||| ||| ||||||||||||| |||||||||||||||||||||||||    
T  43228552 ttcttttgtgttctctcttcctttactctcgctgttgttttctaattttggcttgtattt-taattgttccatacactttgttttggttgcttgattatc 43228650  T
Q  99 ccttactcgacacatcaagtttgttattggtgtgatttttcaacgaa 145  Q
     ||| ||| |||||||||| |||||||||||||||||| ||| ||||    
T  43228651 tcttgctccacacatcaag-ttgttattggtgtgatttctcatcgaa 43228696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 1 - 150
Target Start/End: Complemental strand, 47701667 - 47701524
Alignment:
Q  1 ttcttttgtgttctctcttcctttctctctcgctgttttttacttttgggttgtgtttataattgttccatatactttgttttggttgcttgattatccc 100  Q
    |||||||| ||||||| ||||||||||||    |||||| ||||||||| ||||||| |||||||||||||| |||||||||| ||||||||||||        
T  47701667 ttcttttgcgttctct-ttcctttctctcat--tgttttctacttttggcttgtgttcataattgttccatacactttgttttcgttgcttgatta---- 47701575  T
Q  101 ttactcga-cacatcaagtttgttattggtgtgatttttcaacgaattcgc 150  Q
    ||||| || |||||||||||||||||||||||||||||||| |||||||||    
T  47701574 ttacttgatcacatcaagtttgttattggtgtgatttttcatcgaattcgc 47701524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 139
Target Start/End: Complemental strand, 25688156 - 25688015
Alignment:
Q  1 ttcttttgtgttctctcttccttt-ctctc-tcgctgttttttacttttgggttgtgtttataattgttccatatactttg-ttttggttgcttgattat 97  Q
    |||||||||||||||||||||||| ||||| | | |||||| ||||||||| ||||||||| |||||||||||| |||||| |||||||||  |||||||    
T  25688156 ttcttttgtgttctctcttccttttctctcgttgatgttttctacttttggcttgtgtttacaattgttccatacactttgattttggttgtctgattat 25688057  T
Q  98 cccttactcgacacatcaagtttgttattggtgtgatttttc 139  Q
    | ||| ||| |||||| ||||||||||||||||||| |||||    
T  25688056 cacttgctccacacataaagtttgttattggtgtgagttttc 25688015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 148
Target Start/End: Complemental strand, 27101177 - 27101028
Alignment:
Q  1 ttcttttgtgttctctcttcctttctctctcgctgtttttt---acttttgggttgtgtttataattgttccatatactttgttttggttgcttgattat 97  Q
    |||||||||||||||||||||||| ||||| |||||| |||   |||||| | ||||| |||||||||||||||| |||||||||||||||| |||||||    
T  27101177 ttcttttgtgttctctcttccttt-tctcttgctgttgttttctactttttgcttgtgattataattgttccatacactttgttttggttgcctgattat 27101079  T
Q  98 cccttactcgacacatcaagtttgttattggtgtgat-ttttcaacgaattc 148  Q
     | || ||| |||||||||| |||||||||||||||| |||||| |||||||    
T  27101078 tcattgctccacacatcaag-ttgttattggtgtgatattttcatcgaattc 27101028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 148
Target Start/End: Complemental strand, 54691570 - 54691423
Alignment:
Q  1 ttcttttgtgttctctcttcctttctctctcgct-gttttttacttttgggttgtgtttataattgttccatatactttgttttggttgcttgattatcc 99  Q
    ||||||| |||| ||||||||||||||||||| | ||||| ||||||||| ||||||||||||||||| |||| | |||||||||||||| ||||||||     
T  54691570 ttcttttatgttttctcttcctttctctctcggttgttttctacttttggcttgtgtttataattgtttcatacattttgttttggttgcctgattatca 54691471  T
Q  100 cttactcgacacatcaagtttgttattggtgtgatttttcaacgaattc 148  Q
    ||| ||| |||||| || |||||||||| |||| ||| ||| |||||||    
T  54691470 cttgctccacacat-aaatttgttattgatgtgttttctcatcgaattc 54691423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 150
Target Start/End: Complemental strand, 9604603 - 9604451
Alignment:
Q  1 ttcttttgtgttctctcttcct-ttctctctcgctgttttttact---tttgggttgtgtttataattgttccatatactttgttttggttgcttgatta 96  Q
    |||||||||||||||||||| | || |||||||||||| ||| ||   |||||  |||| ||||||||||| |||| |||||| ||||||| ||||||||    
T  9604603 ttcttttgtgttctctcttcttcttttctctcgctgttgttttctatttttggcctgtgattataattgtttcatacactttggtttggttacttgatta 9604504  T
Q  97 tcccttactcgacacatcaagtttgttattggtgtgatttttcaacgaattcgc 150  Q
    | |||| ||| |||||||||| |||||||||||||||||||||| |||||||||    
T  9604503 ttccttgctccacacatcaag-ttgttattggtgtgatttttcatcgaattcgc 9604451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 34 - 150
Target Start/End: Original strand, 5191952 - 5192064
Alignment:
Q  34 tgttttttacttttgggttgtgtttataattgttccatatactttgttttggttgcttgattatcccttactcgacacatcaagtttgttattggtgtga 133  Q
    |||||| ||||||||| |||| ||||  ||||||||||| ||||||||||||||||||||||||||||| ||| |||||||||| |||||||||||||||    
T  5191952 tgttttctacttttggcttgtattta--attgttccatacactttgttttggttgcttgattatcccttgctccacacatcaag-ttgttattggtgtga 5192048  T
Q  134 tttttcaacgaattcgc 150  Q
     |||||| |||||||||    
T  5192049 -ttttcatcgaattcgc 5192064  T

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Target: chr3; HSP #45
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 4 - 132
Target Start/End: Original strand, 53591449 - 53591575
Alignment:
Q  4 ttttgtgttctctcttcctttctctctcgctgttttttacttttgggttgtgtttataattgttccatatactttgttttggttgcttgattatccctta 103  Q
    |||||| |||||||||| ||||||  |||||||||| | ||||||  || ||||||||||||||||||| | |||||||||||||||||||||||||||     
T  53591449 ttttgtattctctcttcttttctc--tcgctgttttctgcttttgacttatgtttataattgttccatacattttgttttggttgcttgattatcccttg 53591546  T
Q  104 ctcgacacatcaagtttgttattggtgtg 132  Q
     || ||||||||| |||||||||| ||||    
T  53591547 ttccacacatcaaatttgttattgatgtg 53591575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 34 - 137
Target Start/End: Complemental strand, 10955983 - 10955883
Alignment:
Q  34 tgttttttacttttgggttgtgtttataattgttccatatactttgttttggttgcttgattatcccttactcgacacatcaagtttgttattggtgtga 133  Q
    |||||| ||||||||| |||| ||||  ||||||||||| ||||||||||||||||||||||||||||| ||| |||||||||| |||||||||||||||    
T  10955983 tgttttctacttttggcttgtattta--attgttccatacactttgttttggttgcttgattatcccttgctccacacatcaag-ttgttattggtgtga 10955887  T
Q  134 tttt 137  Q
    ||||    
T  10955886 tttt 10955883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 34 - 157
Target Start/End: Original strand, 25533726 - 25533845
Alignment:
Q  34 tgttttttacttttgggttgtgtttataattgttccatatactttgttttggttgcttgattatcccttactcgacacatcaagtttgttattggtgtga 133  Q
    |||||| ||||||||| |||| ||||  ||||||||||| |||||||||||||||||||| |||| ||| ||| |||||||||| |||||||||||||||    
T  25533726 tgttttctacttttggcttgtattta--attgttccatacactttgttttggttgcttga-tatctcttgctccacacatcaag-ttgttattggtgtga 25533821  T
Q  134 tttttcaacgaattcgctacaatt 157  Q
    ||||||| ||||||||| ||||||    
T  25533822 tttttcatcgaattcgcaacaatt 25533845  T

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Target: chr3; HSP #48
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 157
Target Start/End: Original strand, 23633714 - 23633865
Alignment:
Q  1 ttcttttgtgttctctcttcctttctctctcgctgttttttacttttgggttgtgtttataattgttccatatactttgttttggttgcttgattatccc 100  Q
    ||||||||||||||||||| |||||||||  | |||||| ||||| ||| |||||||||||| |  |||||| |||||||||||||||||||||| || |    
T  23633714 ttcttttgtgttctctctttctttctctc--gatgttttctacttgtggcttgtgtttataaat--tccatacactttgttttggttgcttgattttcac 23633809  T
Q  101 ttactcgacacatcaagtttgttattggtgtgatttttcaacgaattcgctacaatt 157  Q
    || ||  ||||||| ||| | ||||||||||||||||||| ||||||| | ||||||    
T  23633810 ttgcttcacacatctagtat-ttattggtgtgatttttcatcgaattcacaacaatt 23633865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 34 - 139
Target Start/End: Original strand, 5886498 - 5886601
Alignment:
Q  34 tgttttttacttttgggttgtgtttataattgttccatatactttgttttggttgcttgattatcccttactcgacacatcaagtttgttattggtgtga 133  Q
    |||||| ||||||||| ||||| |||||| ||||||||| ||||||||| ||||||||| ||||||||| ||| |||||||||| |||||||||||||||    
T  5886498 tgttttctacttttggcttgtgattataactgttccatacactttgttt-ggttgcttgtttatcccttgctccacacatcaag-ttgttattggtgtga 5886595  T
Q  134 tttttc 139  Q
    ||||||    
T  5886596 tttttc 5886601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 34 - 139
Target Start/End: Original strand, 5899971 - 5900074
Alignment:
Q  34 tgttttttacttttgggttgtgtttataattgttccatatactttgttttggttgcttgattatcccttactcgacacatcaagtttgttattggtgtga 133  Q
    |||||| ||||||||| ||||| |||||| ||||||||| ||||||||| ||||||||| ||||||||| ||| |||||||||| |||||||||||||||    
T  5899971 tgttttctacttttggcttgtgattataactgttccatacactttgttt-ggttgcttgtttatcccttgctccacacatcaag-ttgttattggtgtga 5900068  T
Q  134 tttttc 139  Q
    ||||||    
T  5900069 tttttc 5900074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 34 - 157
Target Start/End: Original strand, 11168402 - 11168522
Alignment:
Q  34 tgttttttacttttgggttgtgtttataattgttccatatactttg-ttttggttgcttgattatcccttactcgacacatcaagtttgttattggtgtg 132  Q
    |||||| ||||||||| |||| ||||  ||||||||||| |||||| ||||||||||||||||||||||| ||| |||||||||| ||||||||||||||    
T  11168402 tgttttctacttttggcttgtattta--attgttccatacactttgattttggttgcttgattatcccttgctccacacatcaag-ttgttattggtgtg 11168498  T
Q  133 atttttcaacgaattcgctacaatt 157  Q
    | |||||| ||||||||| ||||||    
T  11168499 a-ttttcatcgaattcgcaacaatt 11168522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 34 - 137
Target Start/End: Complemental strand, 10084345 - 10084245
Alignment:
Q  34 tgttttttacttttgggttgtgtttataattgttccatatactttgttttggttgcttgattatcccttactcgacacatcaagtttgttattggtgtga 133  Q
    |||||| ||||||||| |||| ||||  ||||| ||||| ||||||||||||||||||||||||||||| ||| |||||||||| |||||||||||||||    
T  10084345 tgttttctacttttggcttgtattta--attgtcccatacactttgttttggttgcttgattatcccttgctccacacatcaag-ttgttattggtgtga 10084249  T
Q  134 tttt 137  Q
    ||||    
T  10084248 tttt 10084245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 34 - 137
Target Start/End: Complemental strand, 10191268 - 10191168
Alignment:
Q  34 tgttttttacttttgggttgtgtttataattgttccatatactttgttttggttgcttgattatcccttactcgacacatcaagtttgttattggtgtga 133  Q
    |||||| ||||||||| |||| ||||  ||||| ||||| ||||||||||||||||||||||||||||| ||| |||||||||| |||||||||||||||    
T  10191268 tgttttctacttttggcttgtattta--attgtcccatacactttgttttggttgcttgattatcccttgctccacacatcaag-ttgttattggtgtga 10191172  T
Q  134 tttt 137  Q
    ||||    
T  10191171 tttt 10191168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 127
Target Start/End: Complemental strand, 48361667 - 48361538
Alignment:
Q  1 ttcttttgtgttctctcttcctttct---ctctcgctgttttttacttttgggttgtgtttataattgttccatatactttgttttggttgcttgattat 97  Q
    ||||||||||||||||||||  ||||   |||||| |||||| ||||||||  ||||| |||||||||||||||| ||||||||||||||||||||||||    
T  48361667 ttcttttgtgttctctcttctcttcttttctctcgttgttttctacttttgacttgtgattataattgttccatacactttgttttggttgcttgattat 48361568  T
Q  98 cccttactcgacacatcaagtttgttattg 127  Q
     | ||  || | |||| |||||||||||||    
T  48361567 tcattgttccatacattaagtttgttattg 48361538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 34 - 157
Target Start/End: Complemental strand, 6065751 - 6065630
Alignment:
Q  34 tgttttttacttttgggttgtgtttataattgttccatatactttg-ttttggttgcttgattatcccttactcgacacatcaagtttgttattggtgtg 132  Q
    |||||| ||||||||| |||| ||||||| | |  |||| |||||| |||||||||||| |||||||||| ||| |||||||||||| ||||||||||||    
T  6065751 tgttttctacttttggcttgtatttataacttt--catacactttgattttggttgcttaattatcccttgctccacacatcaagtt-gttattggtgtg 6065655  T
Q  133 atttttcaacgaattcgctacaatt 157  Q
    |||||||| ||||||||| ||||||    
T  6065654 atttttcatcgaattcgcaacaatt 6065630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 60 - 137
Target Start/End: Complemental strand, 53893986 - 53893910
Alignment:
Q  60 taattgttccatatactttgttttggttgcttgattatcccttactcgacacatcaagtttgttattggtgtgatttt 137  Q
    ||||| ||||||| ||||||||||||||||||||||||||||| ||| |||||||||| |||||||||||||||||||    
T  53893986 taattattccatacactttgttttggttgcttgattatcccttgctccacacatcaag-ttgttattggtgtgatttt 53893910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 34 - 148
Target Start/End: Original strand, 747059 - 747171
Alignment:
Q  34 tgttttttacttttgggttgtgtttataattgttccatatactttg-ttttggttgcttgattatcccttactcgacacatcaagtttgttattggtgtg 132  Q
    |||||| ||||||||| |||| ||||||| | |  |||| |||||| ||||||||||||||||||||||| ||| |||||||||| ||||||||||||||    
T  747059 tgttttctacttttggcttgtatttataacttt--catacactttgattttggttgcttgattatcccttgctccacacatcaag-ttgttattggtgtg 747155  T
Q  133 atttttcaacgaattc 148  Q
    |||||||| |||||||    
T  747156 atttttcatcgaattc 747171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 34 - 137
Target Start/End: Complemental strand, 10958279 - 10958179
Alignment:
Q  34 tgttttttacttttgggttgtgtttataattgttccatatactttgttttggttgcttgattatcccttactcgacacatcaagtttgttattggtgtga 133  Q
    |||||| ||||||||| |||| ||||  ||||||| ||| ||||||||||||||||||||||||| ||| ||| |||||||||| |||||||||||||||    
T  10958279 tgttttctacttttggcttgtattta--attgttctatacactttgttttggttgcttgattatctcttgctccacacatcaag-ttgttattggtgtga 10958183  T
Q  134 tttt 137  Q
    ||||    
T  10958182 tttt 10958179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 26 - 148
Target Start/End: Complemental strand, 28761412 - 28761293
Alignment:
Q  26 tctctcgctgttttttacttttgggttgtgtttataattgttccatatactttgttttggttgcttgattatcccttactcgacacatcaagtttgttat 125  Q
    ||||||| |||||| ||||||||  ||||| ||||||||  |||||| ||||| ||||||||| ||||||||| ||| ||| |||||||||| || ||||    
T  28761412 tctctcgttgttttctacttttgc-ttgtgattataatt--tccatacactttattttggttgtttgattatcacttgctccacacatcaagattattat 28761316  T
Q  126 tggtgtgatttttcaacgaattc 148  Q
    ||||||||||||||| |||||||    
T  28761315 tggtgtgatttttcatcgaattc 28761293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 34 - 148
Target Start/End: Original strand, 50494300 - 50494411
Alignment:
Q  34 tgttttttacttttgggttgtgtttataattgttccatatactttgttttggttgcttgattatcccttactcgacacatcaagtttgttattggtgtga 133  Q
    |||||| ||||||||| |||| ||||  ||| |||||||  ||||||||||||||||| |||||| ||| ||| |||||||||| |||||||||||||||    
T  50494300 tgttttctacttttggcttgtattta--attattccatacgctttgttttggttgcttaattatctcttgctccacacatcaag-ttgttattggtgtga 50494396  T
Q  134 tttttcaacgaattc 148  Q
    ||||||| |||||||    
T  50494397 tttttcatcgaattc 50494411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 60 - 138
Target Start/End: Original strand, 25389232 - 25389309
Alignment:
Q  60 taattgttccatatactttgttttggttgcttgattatcccttactcgacacatcaagtttgttattggtgtgattttt 138  Q
    ||||| ||||||| ||||||||||||||||||||||||||||| ||| |||||||||| ||||||||||| ||||||||    
T  25389232 taattattccatacactttgttttggttgcttgattatcccttgctccacacatcaag-ttgttattggtatgattttt 25389309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 34 - 139
Target Start/End: Original strand, 3859811 - 3859914
Alignment:
Q  34 tgttttttacttttgggttgtgtttataattgttccatatactttgttttggttgcttgattatcccttactcgacacatcaagtttgttattggtgtga 133  Q
    |||||| ||||||||| |||| ||| |||||||| |||| |||||||||||||||||| | ||||||||| || |||||||||| |||||||||||||||    
T  3859811 tgttttctacttttggcttgtattt-taattgtttcatacactttgttttggttgcttaactatcccttattccacacatcaag-ttgttattggtgtga 3859908  T
Q  134 tttttc 139  Q
     |||||    
T  3859909 cttttc 3859914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 34 - 137
Target Start/End: Original strand, 456209 - 456309
Alignment:
Q  34 tgttttttacttttgggttgtgtttataattgttccatatactttgttttggttgcttgattatcccttactcgacacatcaagtttgttattggtgtga 133  Q
    |||||| ||||||||| |||| ||||||| | |  ||||  |||||||||||||||||||||||||||| ||| |||||||||| |||||||||||||||    
T  456209 tgttttctacttttggcttgtatttataacttt--catacgctttgttttggttgcttgattatcccttgctccacacatcaag-ttgttattggtgtga 456305  T
Q  134 tttt 137  Q
    ||||    
T  456306 tttt 456309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 34 - 137
Target Start/End: Original strand, 458586 - 458686
Alignment:
Q  34 tgttttttacttttgggttgtgtttataattgttccatatactttgttttggttgcttgattatcccttactcgacacatcaagtttgttattggtgtga 133  Q
    |||||| ||||||||| |||| ||||||| | |  ||||  |||||||||||||||||||||||||||| ||| |||||||||| |||||||||||||||    
T  458586 tgttttctacttttggcttgtatttataacttt--catacgctttgttttggttgcttgattatcccttgctccacacatcaag-ttgttattggtgtga 458682  T
Q  134 tttt 137  Q
    ||||    
T  458683 tttt 458686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 148
Target Start/End: Original strand, 17795520 - 17795663
Alignment:
Q  1 ttcttttgtgttctctcttcctttctctctcgctgttttttacttttgggttgtgtttataattgttccatatactttgttttggttgcttgattatccc 100  Q
    |||| |||||||||||||| |||| ||||||| |||||| ||||||||  ||||| |||||| |  |||||| | ||| |||||||||||||| ||||      
T  17795520 ttctcttgtgttctctctttcttt-tctctcgttgttttctacttttgt-ttgtgattataact--tccatacattttattttggttgcttgactatcag 17795615  T
Q  101 ttactcgacacatcaagtttgttattggtgtgatttttcaacgaattc 148  Q
    || ||| ||||||||| ||| ||||||||||||||||||| |||||||    
T  17795616 ttgctccacacatcaaatttattattggtgtgatttttcatcgaattc 17795663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 148
Target Start/End: Original strand, 19103960 - 19104103
Alignment:
Q  1 ttcttttgtgttctctcttcctttctctctcgctgttttttacttttgggttgtgtttataattgttccatatactttgttttggttgcttgattatccc 100  Q
    |||| |||||||||||||| |||| ||||||| |||||| ||||||||  ||||| |||||| |  |||||| | ||| |||||||||||||| ||||      
T  19103960 ttctcttgtgttctctctttcttt-tctctcgttgttttctacttttgt-ttgtgattataact--tccatacattttattttggttgcttgactatcag 19104055  T
Q  101 ttactcgacacatcaagtttgttattggtgtgatttttcaacgaattc 148  Q
    || ||| ||||||||| ||| ||||||||||||||||||| |||||||    
T  19104056 ttgctccacacatcaaatttattattggtgtgatttttcatcgaattc 19104103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 7 - 148
Target Start/End: Original strand, 31151612 - 31151748
Alignment:
Q  7 tgtgttctctcttcctttctctctcgctgttttt-tacttttgggttgtgtttataattgttccatatactttgttttggttgcttgattatcccttact 105  Q
    |||||||||||||| ||||||||  ||||||||| |||| ||   |||||||||||| |  |||||| ||||||||||||||||||||||||  ||| ||    
T  31151612 tgtgttctctcttcttttctctc--gctgtttttctactcttac-ttgtgtttataact--tccatacactttgttttggttgcttgattattacttgct 31151706  T
Q  106 cgacacatcaagtttgttattggtgtgatttttcaacgaattc 148  Q
    | ||||||||||| | ||||||||||||||||||| |||||||    
T  31151707 ccacacatcaagtat-ttattggtgtgatttttcatcgaattc 31151748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 34 - 136
Target Start/End: Original strand, 38890341 - 38890441
Alignment:
Q  34 tgttttttacttttgggttgtgtttataattgttccatatactttg-ttttggttgcttgattatcccttactcgacacatcaagtttgttattggtgtg 132  Q
    |||||| ||||||||| |||| ||||  |||||||||||  ||||| ||||||||||||||||||||||| ||| |||||||||| ||||||||||||||    
T  38890341 tgttttctacttttggcttgtattta--attgttccatacgctttgattttggttgcttgattatcccttgctccacacatcaag-ttgttattggtgtg 38890437  T
Q  133 attt 136  Q
    ||||    
T  38890438 attt 38890441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 34 - 157
Target Start/End: Complemental strand, 10621485 - 10621363
Alignment:
Q  34 tgttttttacttttgggttgtgtttataattgttccatatactttg--ttttggttgcttgattatcccttactcgacacatcaagtttgttattggtgt 131  Q
    |||||| ||||||||| |||| ||||||| | |  |||| ||||||  |||||||||||| |||||||||| ||| |||||||||| |||||||||||||    
T  10621485 tgttttctacttttggcttgtatttataacttt--catacactttggtttttggttgcttaattatcccttgctccacacatcaag-ttgttattggtgt 10621389  T
Q  132 gatttttcaacgaattcgctacaatt 157  Q
    ||||||||| ||||||| | ||||||    
T  10621388 gatttttcatcgaattcacaacaatt 10621363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 34 - 155
Target Start/End: Original strand, 11170671 - 11170789
Alignment:
Q  34 tgttttttacttttgggttgtgtttataattgttccatatactttg-ttttggttgcttgattatcccttactcgacacatcaagtttgttattggtgtg 132  Q
    |||||| ||||||||| |||| ||||  ||| ||||||| |||||| ||||||||||||||||||||||||||| |||||||||| ||||||||  ||||    
T  11170671 tgttttctacttttggcttgtattta--attattccatacactttgattttggttgcttgattatcccttactccacacatcaag-ttgttattaatgtg 11170767  T
Q  133 atttttcaacgaattcgctacaa 155  Q
    | |||||| ||||||||| ||||    
T  11170768 a-ttttcatcgaattcgcaacaa 11170789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 34 - 148
Target Start/End: Original strand, 38210672 - 38210783
Alignment:
Q  34 tgttttttacttttgggttgtgtttataattgttccatatactttgttttggttgcttgattatcccttactcgacacatcaagtttgttattggtgtga 133  Q
    |||||| ||||||||| |||| ||||  ||| |||||||  |||||||||| ||| ||||| ||||||| ||| |||||||||| |||||||||||||||    
T  38210672 tgttttctacttttggcttgtattta--attattccatacgctttgttttgtttgtttgataatcccttgctccacacatcaag-ttgttattggtgtga 38210768  T
Q  134 tttttcaacgaattc 148  Q
    ||||||| |||||||    
T  38210769 tttttcatcgaattc 38210783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 66 - 137
Target Start/End: Original strand, 42992712 - 42992783
Alignment:
Q  66 ttccatatactttgttttggttgcttgattatcccttactcgacacatcaagtttgttattggtgtgatttt 137  Q
    ||||||| |||||||||||||||  |||||||||||| ||| ||||||||||||||||||| ||||||||||    
T  42992712 ttccatacactttgttttggttgtctgattatcccttgctctacacatcaagtttgttattagtgtgatttt 42992783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 8 - 137
Target Start/End: Complemental strand, 561764 - 561640
Alignment:
Q  8 gtgttctctcttcctttctctctcgctgttttttacttttgggttgtgtttataattgttccatatactttgttttggttgcttgattatcccttactcg 107  Q
    |||||||||||| || | ||||||| |||||| ||||||||  |||||||||||| |  |||||| ||||||||| ||||||||||||||  |||||||     
T  561764 gtgttctctctttctct-tctctcgatgttttctacttttgc-ttgtgtttataact--tccatacactttgttt-ggttgcttgattattacttactcc 561670  T
Q  108 acacatcaagtttgttattggtgtgatttt 137  Q
    ||||||||||| | ||||||||||||||||    
T  561669 acacatcaagtattttattggtgtgatttt 561640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 98
Target Start/End: Complemental strand, 8183130 - 8183035
Alignment:
Q  1 ttcttttgtgttctctcttcctttctctctcgctgttttttacttttgggttgtgtttataattgttccatatactttgttttggttgcttgattatc 98  Q
    |||||||||||||||||||  ||| ||||| || ||||| ||||||||  |||||||||||||||||||||| || || |||||||||||||| ||||    
T  8183130 ttcttttgtgttctctctt--tttttctcttgcagttttctacttttgacttgtgtttataattgttccatacaccttattttggttgcttgactatc 8183035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 77 - 148
Target Start/End: Complemental strand, 28412946 - 28412876
Alignment:
Q  77 ttgttttggttgcttgattatcccttactcgacacatcaagtttgttattggtgtgatttttcaacgaattc 148  Q
    ||||||||||| |||||||||||||| ||| |||||||||| |||||||||||||| ||||||| |||||||    
T  28412946 ttgttttggttacttgattatcccttgctccacacatcaag-ttgttattggtgtgttttttcatcgaattc 28412876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 80 - 150
Target Start/End: Complemental strand, 5522538 - 5522470
Alignment:
Q  80 ttttggttgcttgattatcccttactcgacacatcaagtttgttattggtgtgatttttcaacgaattcgc 150  Q
    |||||||||||||| |||||||| ||| |||||||||| ||||||||||||||| ||||||||||||||||    
T  5522538 ttttggttgcttgactatcccttgctccacacatcaag-ttgttattggtgtga-ttttcaacgaattcgc 5522470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 60 - 156
Target Start/End: Complemental strand, 7606536 - 7606441
Alignment:
Q  60 taattgttccatatactttg-ttttggttgcttgattatcccttactcgacacatcaagtttgttattggtgtgatttttcaacgaattcgctacaat 156  Q
    ||||||||||||| |||||| |||||||||||||| |||| ||| ||| |||||||||| ||||||||||||| |||||||| |||||| || |||||    
T  7606536 taattgttccatacactttgattttggttgcttgactatctcttgctccacacatcaag-ttgttattggtgt-atttttcatcgaatttgcaacaat 7606441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 36 - 116
Target Start/End: Original strand, 26720850 - 26720928
Alignment:
Q  36 ttttttacttttgggttgtgtttataattgttccatatactttgttttggttgcttgattatcccttactcgacacatcaa 116  Q
    |||| ||||||||| |||| ||||||| |  |||||| ||||||||||||||||||||||||||||| ||| |||||||||    
T  26720850 ttttctacttttggcttgtatttataact--tccatacactttgttttggttgcttgattatcccttgctccacacatcaa 26720928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #79
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 80 - 156
Target Start/End: Complemental strand, 6063356 - 6063281
Alignment:
Q  80 ttttggttgcttgattatcccttactcgacacatcaagtttgttattggtgtgatttttcaacgaattcgctacaat 156  Q
    |||||||||||| ||||||||||  || |||||||||||| ||||| |||||||||||||| ||||||||| |||||    
T  6063356 ttttggttgcttaattatcccttgttccacacatcaagtt-gttatcggtgtgatttttcatcgaattcgcaacaat 6063281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #80
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 36 - 150
Target Start/End: Complemental strand, 22114258 - 22114147
Alignment:
Q  36 ttttttacttttgggttgtgtttataattgttccatatactttg-ttttggttgcttgattatcccttactcgacacatcaagtttgttattggtgtgat 134  Q
    |||| ||||||||| |||| ||||||| | |  |||| |||||| ||||||||||||||||||||||| ||| |||||||||| ||| |||||||||||     
T  22114258 ttttctacttttggcttgtatttataacttt--catacactttgattttggttgcttgattatcccttgctccacacatcaag-ttgctattggtgtga- 22114163  T
Q  135 ttttcaacgaattcgc 150  Q
    |||||| |||||||||    
T  22114162 ttttcatcgaattcgc 22114147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #81
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 34 - 158
Target Start/End: Complemental strand, 51726963 - 51726843
Alignment:
Q  34 tgttttttacttttgggttgtgtttataattgttccatatactttg-ttttggttgcttgattatcccttactcgacacatcaagtttgttattggtgtg 132  Q
    |||||| ||||||||| |||| ||||  ||||||||||| |||||| |||||||||| ||||||| | || | | |||||||||||| ||||||||||||    
T  51726963 tgttttctacttttggcttgtattta--attgttccatacactttgattttggttgcctgattattc-ttgccccacacatcaagtt-gttattggtgtg 51726868  T
Q  133 atttttcaacgaattcgctacaattt 158  Q
    | |||||| ||||||||| |||||||    
T  51726867 a-ttttcatcgaattcgcaacaattt 51726843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #82
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 34 - 150
Target Start/End: Complemental strand, 4103852 - 4103740
Alignment:
Q  34 tgttttttacttttgggttgtgtttataattgttccatatactttgttttggttgcttgattatcccttactcgacacatcaagtttgttattggtgtga 133  Q
    |||||||||||||||   ||| ||||||| |  |||||| ||||| ||| ||||| |||| ||||| || ||| || |||||||||||||||||||||||    
T  4103852 tgttttttacttttgacatgtatttataact--tccatacactttttttcggttgtttgactatcc-ttgctccacgcatcaagtttgttattggtgtga 4103756  T
Q  134 tttttcaacgaattcgc 150  Q
     |||||| |||||||||    
T  4103755 -ttttcatcgaattcgc 4103740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #83
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 108 - 148
Target Start/End: Complemental strand, 29897574 - 29897533
Alignment:
Q  108 acacatcaagtttgttattggtgtgatttt-tcaacgaattc 148  Q
    ||||||||||||||||||||||||| |||| |||||||||||    
T  29897574 acacatcaagtttgttattggtgtggttttctcaacgaattc 29897533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #84
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 84 - 137
Target Start/End: Original strand, 36957651 - 36957703
Alignment:
Q  84 ggttgcttgattatcccttactcgacacatcaagtttgttattggtgtgatttt 137  Q
    ||||||||||||||||||| ||| |||||||||| ||||||||| | |||||||    
T  36957651 ggttgcttgattatcccttgctccacacatcaag-ttgttattgatatgatttt 36957703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #85
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 77 - 148
Target Start/End: Complemental strand, 36871225 - 36871155
Alignment:
Q  77 ttgttttggttgcttgattatcccttactcgacacatcaagtttgttattggtgtga-tttttcaacgaattc 148  Q
    |||||||||||||||||||||  ||| ||| ||||||||||| | |||| ||||||| |||||||||||||||    
T  36871225 ttgttttggttgcttgattat-tcttgctccacacatcaagtat-ttatcggtgtgattttttcaacgaattc 36871155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0131 (Bit Score: 104; Significance: 6e-52; HSPs: 2)
Name: scaffold0131
Description:

Target: scaffold0131; HSP #1
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 6 - 137
Target Start/End: Complemental strand, 14377 - 14247
Alignment:
Q  6 ttgtgttctctcttcctttctctctcgctgttttttacttttgggttgtgtttataattgttccatatactttgttttggttgcttgattatcccttact 105  Q
    |||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||| ||    
T  14377 ttgtgttctctcttcctttctctctcgctgttttctacttttggcttgtgtttataattgttccatacactttgttttggttgcttgattatcccttgct 14278  T
Q  106 cgacacatcaagtttgttattggtgtgatttt 137  Q
    | |||||||||| |||||||||||||||||||    
T  14277 ccacacatcaag-ttgttattggtgtgatttt 14247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0131; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 107 - 148
Target Start/End: Original strand, 15392 - 15433
Alignment:
Q  107 gacacatcaagtttgttattggtgtgatttttcaacgaattc 148  Q
    |||||||||||||||||||||||||||||||||| |||||||    
T  15392 gacacatcaagtttgttattggtgtgatttttcatcgaattc 15433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 102; Significance: 9e-51; HSPs: 49)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 1 - 138
Target Start/End: Original strand, 17849374 - 17849511
Alignment:
Q  1 ttcttttgtgttctctcttcctttctctctcgctgttttttacttttgggttgtgtttataattgttccatatactttgttttggttgcttgattatccc 100  Q
    ||||||||||||||||||||||||||||| || |||||| ||||||||| ||||||||| |||||||||||| |||||||||||||||||||| ||||||    
T  17849374 ttcttttgtgttctctcttcctttctctcccgttgttttctacttttggcttgtgtttaaaattgttccatacactttgttttggttgcttgactatccc 17849473  T
Q  101 ttactcgacacatcaagtttgttattggtgtgattttt 138  Q
    || ||| |||||||||||||||||||||||||||||||    
T  17849474 ttgctccacacatcaagtttgttattggtgtgattttt 17849511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 1 - 138
Target Start/End: Original strand, 19007897 - 19008034
Alignment:
Q  1 ttcttttgtgttctctcttcctttctctctcgctgttttttacttttgggttgtgtttataattgttccatatactttgttttggttgcttgattatccc 100  Q
    |||||||||||||||| ||| ||||||||||| |||||| ||||||||| |||||||||||||||||||||| |||||||||||||||||||||||| ||    
T  19007897 ttcttttgtgttctctattcatttctctctcgttgttttctacttttggcttgtgtttataattgttccatacactttgttttggttgcttgattattcc 19007996  T
Q  101 ttactcgacacatcaagtttgttattggtgtgattttt 138  Q
    || ||| |||||||||||||||||||||||||||||||    
T  19007997 ttgctccacacatcaagtttgttattggtgtgattttt 19008034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 1 - 148
Target Start/End: Original strand, 14837525 - 14837673
Alignment:
Q  1 ttcttttgtgttctctcttcctttctctctcgctgttttttacttttgggttgtgtttataattgttccatatactttgttttggttgcttgattatccc 100  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||| ||| ||||||||||||||||||||||||| |    
T  14837525 ttcttttgtgttctctcttcctttctctctcgctgttttatacttttggcttgtgtttataattgttctatacactttgttttggttgcttgattatcac 14837624  T
Q  101 ttactcgacacatcaagt-ttgttattggtgtgatttttcaacgaattc 148  Q
    || ||| ||||||||||| ||||||||| |||||||| ||| |||||||    
T  14837625 ttgctccacacatcaagtattgttattgatgtgatttctcatcgaattc 14837673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 1 - 156
Target Start/End: Complemental strand, 22707749 - 22707593
Alignment:
Q  1 ttcttttgtgttctctcttcctttctctctcgctgttttttacttttgggttgtgtttataattgttccatatactttgttttggttgcttgattatccc 100  Q
    ||||||||||||||||||||||||||||||||||||||| ||||| ||  |||||||||||||||||||||| |||||||||||||||||||||| | ||    
T  22707749 ttcttttgtgttctctcttcctttctctctcgctgttttctacttctgccttgtgtttataattgttccatacactttgttttggttgcttgattgttcc 22707650  T
Q  101 ttactcgacacatcaagtttgttattggtgtgatttt-tcaacgaattcgctacaat 156  Q
    |||||| ||||||||| ||||||||||||||| |||| ||| ||||||||| |||||    
T  22707649 ttactccacacatcaaatttgttattggtgtggttttctcatcgaattcgcaacaat 22707593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 1 - 145
Target Start/End: Original strand, 28196892 - 28197036
Alignment:
Q  1 ttcttttgtgttctctcttcctttctctctcgctgttttttacttttgggttgtgtttataattgttccatatactttgttttggttgcttgattatccc 100  Q
    |||||||||||||||||||| |||||||||||||||||| ||||||||| ||||||||||||||||| |||| ||||||||||||||||| || ||||||    
T  28196892 ttcttttgtgttctctcttcttttctctctcgctgttttctacttttggcttgtgtttataattgtttcatacactttgttttggttgctggactatccc 28196991  T
Q  101 ttactcgacacatcaagtttgttattggtgtgatttttcaacgaa 145  Q
    || ||| ||||||||| ||||||||||||||||||||||| ||||    
T  28196992 ttgctccacacatcaaatttgttattggtgtgatttttcatcgaa 28197036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 1 - 148
Target Start/End: Original strand, 3022429 - 3022576
Alignment:
Q  1 ttcttttgtgttctctcttcctttctctctcgctgttttttacttttgggttgtgtttataattgttccatatactttgttttggttgcttgattatccc 100  Q
    |||||||||||||||||||||||| ||||||| |||||| | ||||||| |||||||||||||||||||||| ||||||||||||||||||||||||| |    
T  3022429 ttcttttgtgttctctcttcctttttctctcgttgttttctgcttttggcttgtgtttataattgttccatacactttgttttggttgcttgattatcac 3022528  T
Q  101 ttactcgacacatcaagtttgttattggtgtgatttttcaacgaattc 148  Q
    || ||| ||||||||||||||||||| ||||||| | ||| |||||||    
T  3022529 ttgctccacacatcaagtttgttatttgtgtgatctctcaccgaattc 3022576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 1 - 148
Target Start/End: Complemental strand, 6258815 - 6258668
Alignment:
Q  1 ttcttttgtgttctctcttcctttctctctcgctgttttttacttttgggttgtgtttataattgttccatatactttgttttggttgcttgattatccc 100  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||| | |||||||||||||||||||| | |||||||||||||||| |||||||| |    
T  6258815 ttcttttgtgttctctcttcctttctctctcgctgttttctacttttagcttgtgtttataattgttccagacactttgttttggttgcctgattatcac 6258716  T
Q  101 ttactcgacacatcaagtttgttattggtgtgatttttcaacgaattc 148  Q
    || ||| |||||||||||||||||||||| || ||| ||| |||||||    
T  6258715 ttgctccacacatcaagtttgttattggtatgttttctcatcgaattc 6258668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 1 - 148
Target Start/End: Complemental strand, 22287334 - 22287187
Alignment:
Q  1 ttcttttgtgttctctcttcctttctctctcgctgttttttacttttgggttgtgtttataattgttccatatactttgttttggttgcttgattatccc 100  Q
    ||||||||||||||||||||||||||||||||||||||| ||| ||||  |||| ||||||||||||||||| ||| |||||||||||||||| ||||||    
T  22287334 ttcttttgtgttctctcttcctttctctctcgctgttttctacgtttgacttgtttttataattgttccatacactatgttttggttgcttgactatccc 22287235  T
Q  101 ttactcgacacatcaagtttgttattggtgtgatttttcaacgaattc 148  Q
    || ||| ||||||||||||||||||||||||| ||| ||| |||||||    
T  22287234 ttgctccacacatcaagtttgttattggtgtgttttctcatcgaattc 22287187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 1 - 126
Target Start/End: Complemental strand, 5375344 - 5375218
Alignment:
Q  1 ttcttttgtgttctctcttcctttctctctcgctgtttttt-acttttgggttgtgtttataattgttccatatactttgttttggttgcttgattatcc 99  Q
    |||||||||||||||||||| ||||||||| |||||||||| |||||||  |||| ||||||||||||||||| ||||||||||| ||||||||||||||    
T  5375344 ttcttttgtgttctctcttcttttctctcttgctgtttttttacttttgacttgtatttataattgttccatacactttgttttgattgcttgattatcc 5375245  T
Q  100 cttactcgacacatcaagtttgttatt 126  Q
    ||||||| |||||||||||||||||||    
T  5375244 cttactccacacatcaagtttgttatt 5375218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 1 - 157
Target Start/End: Complemental strand, 21520691 - 21520531
Alignment:
Q  1 ttcttttgtgttctctcttcctttctctctcgctgtttttt---acttttgggttgtgtttataattgttccatatactttg-ttttggttgcttgatta 96  Q
    |||||||||||||||||||| |||||||||||||||| |||   |||||||| |||||||||||||||||||||| |||||  |||||||||| ||||||    
T  21520691 ttcttttgtgttctctcttcgtttctctctcgctgttgttttctacttttggcttgtgtttataattgttccatacactttaattttggttgcctgatta 21520592  T
Q  97 tcccttactcgacacatcaagtttgttattggtgtgatttttcaacgaattcgctacaatt 157  Q
    || ||| ||| ||||||||||||||||||||||||| ||| ||| ||||||||| ||||||    
T  21520591 tcacttgctccacacatcaagtttgttattggtgtgttttctcatcgaattcgcaacaatt 21520531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 1 - 137
Target Start/End: Complemental strand, 28459188 - 28459054
Alignment:
Q  1 ttcttttgtgttctctcttcctttctctctcgctgttttttacttttgggttgtgtttataattgttccatatactttgttttggttgcttgattatccc 100  Q
    ||||||||||||||||||| ||||||||| |  |||||| ||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||| |    
T  28459188 ttcttttgtgttctctctttctttctctccc--tgttttctacttttggtttgtgtttataattgttccatacactttgttttggttgcttgattatcac 28459091  T
Q  101 ttactcgacacatcaagtttgttattggtgtgatttt 137  Q
    || ||| ||||||||||| | ||||||||||||||||    
T  28459090 ttgctccacacatcaagtgttttattggtgtgatttt 28459054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 1 - 157
Target Start/End: Complemental strand, 6264146 - 6263990
Alignment:
Q  1 ttcttttgtgttctctcttcctttctctctcgctgttttttacttttgggttgtgtttataattgttccatatactttgttttggttgcttgattatccc 100  Q
    |||||||||||||||||||||||||||||||| |||||| |||||| || ||||||| |||||||||||||| |||||||||||||||| ||||  || |    
T  6264146 ttcttttgtgttctctcttcctttctctctcgttgttttctactttcggcttgtgttaataattgttccatacactttgttttggttgcctgatagtcac 6264047  T
Q  101 ttactcgacacatcaagtttgttattggtgtgatttttcaacgaattcgctacaatt 157  Q
    || ||| ||||||||||||||||||| ||||| ||| ||| ||||||| | ||||||    
T  6264046 ttgctccacacatcaagtttgttattagtgtgttttctcatcgaattcacaacaatt 6263990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 1 - 133
Target Start/End: Complemental strand, 15539527 - 15539396
Alignment:
Q  1 ttcttttgtgttctctcttcctttctctctcgctgttttttacttttgggttgtgtttataattgttccatatactttgttttggttgcttgattatccc 100  Q
    |||||||||||||||||||||||||||||||| |||||| ||||||| | |||||||||||||||||| ||| ||||||||||| ||||||||| || ||    
T  15539527 ttcttttgtgttctctcttcctttctctctcgttgttttctactttttgcttgtgtttataattgttcaatacactttgttttgattgcttgataat-cc 15539429  T
Q  101 ttactcgacacatcaagtttgttattggtgtga 133  Q
    || ||| ||||||||||||||||||||||||||    
T  15539428 ttgctccacacatcaagtttgttattggtgtga 15539396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 148
Target Start/End: Complemental strand, 42923507 - 42923357
Alignment:
Q  1 ttcttttgtgttctctcttcctttctctctcgc--tgttttttacttttgggttgtgtttataattgttccatatactttgtttt-ggttgcttgattat 97  Q
    |||||||||||||||||||| |||||||||| |  |||||| ||||||||  ||||||||||||||||| |||| |||||||||| ||||||||||||||    
T  42923507 ttcttttgtgttctctcttcttttctctctctcgttgttttctacttttgacttgtgtttataattgtttcatacactttgtttttggttgcttgattat 42923408  T
Q  98 cccttactcgacacatcaagtttgttattggtgtgatttttcaacgaattc 148  Q
    | ||| ||| ||||||||||||||||||||||||| |||  ||||||||||    
T  42923407 ctcttgctccacacatcaagtttgttattggtgtgttttcacaacgaattc 42923357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 98
Target Start/End: Complemental strand, 22407452 - 22407355
Alignment:
Q  1 ttcttttgtgttctctcttcctttctctctcgctgttttttacttttgggttgtgtttataattgttccatatactttgttttggttgcttgattatc 98  Q
    |||||||||||||||||||||||||||||||| |||||| ||||||||| |||||||||||||||||||||| |||||||||||||||||||| ||||    
T  22407452 ttcttttgtgttctctcttcctttctctctcgatgttttctacttttggcttgtgtttataattgttccatacactttgttttggttgcttgactatc 22407355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 159
Target Start/End: Complemental strand, 22163020 - 22162864
Alignment:
Q  1 ttcttttgtgttctctcttcctttctctctcgctgttttttacttttgggttgtgtttataattgttccatatactttgttttggttgcttgattatccc 100  Q
    |||||||||||||||||||| ||||||||  | |||||| ||||||||| ||||| |||||| ||||||||| | |||||||||||||||||||||||||    
T  22163020 ttcttttgtgttctctcttcttttctctc--gttgttttctacttttggcttgtgcttataactgttccatacaatttgttttggttgcttgattatccc 22162923  T
Q  101 ttactcgacacatcaagtttgttattggtgtgatttttcaacgaattcgctacaatttg 159  Q
    || ||  |||||||||  |||||||||||||| ||| ||| ||||||||| ||| ||||    
T  22162922 ttgcttcacacatcaaaattgttattggtgtgttttctcatcgaattcgcaacagtttg 22162864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 60 - 150
Target Start/End: Original strand, 27105118 - 27105208
Alignment:
Q  60 taattgttccatatactttgttttggttgcttgattatcccttactcgacacatcaagtttgttattggtgtgatttttcaacgaattcgc 150  Q
    ||||||||||||| ||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||| |||||||||    
T  27105118 taattgttccatacactttgttttggttgcttgattatcccttgctccacacatcaagtttgttattggtgtgatttttcatcgaattcgc 27105208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 23 - 132
Target Start/End: Complemental strand, 34979565 - 34979456
Alignment:
Q  23 ttctctctcgctgttttttacttttgggttgtgtttataattgttccatatactttgttttggttgcttgattatcccttactcgacacatcaagtttgt 122  Q
    ||||||||||||||||| ||||||||  || ||||||||||||||||||| ||||| |||||||||||| ||||| |||||||| |||||||||||||||    
T  34979565 ttctctctcgctgttttctacttttgacttatgtttataattgttccatacactttattttggttgctttattattccttactccacacatcaagtttgt 34979466  T
Q  123 tattggtgtg 132  Q
    ||||||||||    
T  34979465 tattggtgtg 34979456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 6 - 150
Target Start/End: Complemental strand, 7462940 - 7462793
Alignment:
Q  6 ttgtgttctctcttc-ctttctctctc-gctgttttttacttttgggttgtgtttataattgttccatatactttgttttggttgcttgattatccctta 103  Q
    ||||||||||||||| ||||||||| | | |||||| ||||||||| ||||| ||||||||||| |||| |||||||||||||||||||||||||| ||     
T  7462940 ttgtgttctctcttctctttctctcgctgttgttttctacttttggcttgtgattataattgtttcatacactttgttttggttgcttgattatcctttg 7462841  T
Q  104 ctcgacacatcaagtttgttattggtgtgatttt-tcaacgaattcgc 150  Q
    ||| |||||||||||||||||| | |||| |||| |||||||||||||    
T  7462840 ctccacacatcaagtttgttatcgatgtggttttctcaacgaattcgc 7462793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 1 - 150
Target Start/End: Complemental strand, 43623578 - 43623427
Alignment:
Q  1 ttcttttgtgttctctcttcctttctctctc-gctgttttttacttttgggttgtgtttataattgttccatatactttg-ttttggttgcttgattatc 98  Q
    |||||||||||||||||||| |||||||| | | |||||| ||||||||| || || |||||||||||||||| |||||  |||||||||| ||||||||    
T  43623578 ttcttttgtgttctctcttcttttctctcgctgttgttttctacttttggcttatgattataattgttccatacactttaattttggttgcctgattatc 43623479  T
Q  99 ccttactcgacacatcaagtttgttattggtgtgatttttcaacgaattcgc 150  Q
      || ||| |||||||||||| |||||||||||||||||||| |||||||||    
T  43623478 tattgctccacacatcaagttagttattggtgtgatttttcatcgaattcgc 43623427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 30 - 137
Target Start/End: Original strand, 38020366 - 38020473
Alignment:
Q  30 tcgctgttttttacttttgggttgtgtttataattgttccatatactttgttttggttgcttgattatcccttactcgacacatcaagtttgttattggt 129  Q
    |||||||||| ||||||| | ||||| |||||||||||||||| |||||||||||||||||||||||| |||| ||| | ||||||| ||||||||||||    
T  38020366 tcgctgttttctacttttagcttgtgattataattgttccatacactttgttttggttgcttgattattccttgctccatacatcaaatttgttattggt 38020465  T
Q  130 gtgatttt 137  Q
    ||||||||    
T  38020466 gtgatttt 38020473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 34 - 138
Target Start/End: Complemental strand, 13910003 - 13909902
Alignment:
Q  34 tgttttttacttttgggttgtgtttataattgttccatatactttgttttggttgcttgattatcccttactcgacacatcaagtttgttattggtgtga 133  Q
    |||||| ||||||||| |||| ||||  ||||||||||| ||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||    
T  13910003 tgttttctacttttggcttgtattta--attgttccatacactttgttttggttgcttgattatcccttactccacacatcaag-ttgttattggtgtga 13909907  T
Q  134 ttttt 138  Q
     ||||    
T  13909906 ctttt 13909902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 34 - 150
Target Start/End: Complemental strand, 45279959 - 45279846
Alignment:
Q  34 tgttttttacttttgggttgtgtttataattgttccatatactttgttttggttgcttgattatcccttactcgacacatcaagtttgttattggtgtga 133  Q
    |||||| ||||||||| |||| ||||  ||||||||||| ||||||||||||||||||||||||| ||| ||| |||||||||| |||||||||||||||    
T  45279959 tgttttctacttttggcttgtattta--attgttccatacactttgttttggttgcttgattatctcttgctccacacatcaag-ttgttattggtgtga 45279863  T
Q  134 tttttcaacgaattcgc 150  Q
    ||| ||| |||||||||    
T  45279862 tttctcatcgaattcgc 45279846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 44289065 - 44288982
Alignment:
Q  1 ttcttttgtgttctctcttcctttctctctcgctgttttttacttttgggttgtgtttataattgttccatatactttgttttg 84  Q
    |||||||||||||||||||| |||||||||||||||||| |||| |||| ||||||||||||||||| |||| |||||||||||    
T  44289065 ttcttttgtgttctctcttcatttctctctcgctgttttctactgttggcttgtgtttataattgtttcatacactttgttttg 44288982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 51 - 157
Target Start/End: Complemental strand, 11739524 - 11739418
Alignment:
Q  51 ttgtgtttataattgttccatatactttgttttggttgcttgattatcccttactcgacacatcaagtttgttattggtgtgatttttcaacgaattcgc 150  Q
    |||| |||||||||||| |||| ||||||||||  || ||||| |||||||| ||| ||||||||||||||||||||||||||||||||| ||||||| |    
T  11739524 ttgtatttataattgtttcatacactttgtttttatttcttgactatcccttgctctacacatcaagtttgttattggtgtgatttttcatcgaattcac 11739425  T
Q  151 tacaatt 157  Q
     ||||||    
T  11739424 aacaatt 11739418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 131
Target Start/End: Original strand, 23871073 - 23871205
Alignment:
Q  1 ttcttttgtgttctctcttcctttctctctcgctgttttttacttttgggttgtgtttataattg--ttccatatactttgttttggttgcttgattatc 98  Q
    |||||||| ||||||||||| |||||||| ||||||||| ||||||||  |||||||||||||||  || |||| ||||||||||||||  || ||| |     
T  23871073 ttcttttgagttctctcttcatttctctcccgctgttttctacttttgccttgtgtttataattgtttttcatacactttgttttggttatttaattgtt 23871172  T
Q  99 ccttactcgacacatcaagtttgttattggtgt 131  Q
    |||| ||| ||||||||| ||||||||||||||    
T  23871173 ccttgctccacacatcaaatttgttattggtgt 23871205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 60 - 157
Target Start/End: Complemental strand, 36561074 - 36560978
Alignment:
Q  60 taattgttccatatactttgttttggttgcttgattatcccttactcgacacatcaagtttgttattggtgtgatttttcaacgaattcgctacaatt 157  Q
    |||||||||||||  ||||||||||||||||||||||| |||| ||| |||||||||| |||||||||||||||||||||| ||||||| | ||||||    
T  36561074 taattgttccatacgctttgttttggttgcttgattattccttgctccacacatcaag-ttgttattggtgtgatttttcatcgaattcacaacaatt 36560978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 60 - 148
Target Start/End: Complemental strand, 36558814 - 36558727
Alignment:
Q  60 taattgttccatatactttgttttggttgcttgattatcccttactcgacacatcaagtttgttattggtgtgatttttcaacgaattc 148  Q
    |||||||||||||  |||||||||||||||||||||||||||| ||| |||||||||| || ||||||||||||||||||| |||||||    
T  36558814 taattgttccatacgctttgttttggttgcttgattatcccttgctccacacatcaag-ttattattggtgtgatttttcatcgaattc 36558727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 4 - 155
Target Start/End: Complemental strand, 45238992 - 45238841
Alignment:
Q  4 ttttgtgttctctcttcctttctctctcgctgttttttacttttgggttgtgtttataattgttccatat--actttg-ttttggttgcttgattatccc 100  Q
    ||||||||||||||||| ||||||||  |||||||| ||||||||| ||||| |||||| ||||  ||||  |||| | |||||||||||||| |||| |    
T  45238992 ttttgtgttctctcttcttttctctc--gctgttttctacttttggcttgtgattataactgttg-atatccacttcgattttggttgcttgactatcgc 45238896  T
Q  101 ttactcgacacatcaagtttgttattggtgtgatttttcaacgaattcgctacaa 155  Q
    ||  || ||||||||||||| ||||||||||||||||||| ||||||||| ||||    
T  45238895 ttggtccacacatcaagtttattattggtgtgatttttcatcgaattcgcaacaa 45238841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 119
Target Start/End: Original strand, 17848697 - 17848814
Alignment:
Q  1 ttcttttgtgttctctcttcctttctctctcgctgttttttacttttgggttgtgtttataattgttccatatactttg-ttttggttgcttgattatcc 99  Q
    |||||||||||||||||||| ||||||||  |||||||| ||||||| | ||| ||||||||||||| |||| |||  | |||||||||||||||||||     
T  17848697 ttcttttgtgttctctcttcttttctctc--gctgttttctactttttgtttgcgtttataattgtttcatacactgcgattttggttgcttgattatca 17848794  T
Q  100 cttactcgacacatcaagtt 119  Q
    ||| ||| ||||||||||||    
T  17848795 cttgctccacacatcaagtt 17848814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 66 - 148
Target Start/End: Original strand, 22874431 - 22874513
Alignment:
Q  66 ttccatatactttgttttggttgcttgattatcccttactcgacacatcaagtttgttattggtgtgatttttcaacgaattc 148  Q
    ||||||| |||||||||| ||||||||| |||| ||| ||| ||||||||||||| ||||||||||||||||||| |||||||    
T  22874431 ttccatacactttgttttagttgcttgactatcacttgctccacacatcaagtttattattggtgtgatttttcatcgaattc 22874513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 60 - 137
Target Start/End: Complemental strand, 23452171 - 23452094
Alignment:
Q  60 taattgttccatatactttg-ttttggttgcttgattatcccttactcgacacatcaagtttgttattggtgtgatttt 137  Q
    ||||||||||||| |||||| ||||||||||||||||||||||| ||| |||||||||| |||||||||||||||||||    
T  23452171 taattgttccatacactttgattttggttgcttgattatcccttgctccacacatcaag-ttgttattggtgtgatttt 23452094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 36 - 155
Target Start/End: Complemental strand, 19501958 - 19501842
Alignment:
Q  36 ttttttacttttgggttgtgtttataattgttccatatactttgtttt-ggttgcttgattatcccttactcgacacatcaagtttgttattggtgtgat 134  Q
    |||| ||||||||| |||| ||||||| |  |||||| |||||||||| ||||||||||||||||||| ||| |||||||||| |||||||||||||||     
T  19501958 ttttctacttttggcttgtatttataact--tccatacactttgtttttggttgcttgattatcccttgctccacacatcaag-ttgttattggtgtga- 19501863  T
Q  135 ttttcaacgaattcgctacaa 155  Q
    |||||| ||||||||| ||||    
T  19501862 ttttcatcgaattcgcaacaa 19501842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 41 - 137
Target Start/End: Complemental strand, 19504288 - 19504194
Alignment:
Q  41 tacttttgggttgtgtttataattgttccatatactttgtttt-ggttgcttgattatcccttactcgacacatcaagtttgttattggtgtgatttt 137  Q
    ||||||||| |||| ||||||| |  |||||| |||||||||| ||||||||||||||||||| ||| |||||||||| |||||||||||||||||||    
T  19504288 tacttttggcttgtatttataact--tccatacactttgtttttggttgcttgattatcccttgctccacacatcaag-ttgttattggtgtgatttt 19504194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 60 - 138
Target Start/End: Complemental strand, 35215526 - 35215449
Alignment:
Q  60 taattgttccatatactttgttttggttgcttgattatcccttactcgacacatcaagtttgttattggtgtgattttt 138  Q
    ||||| || ||||| ||||||||||||||||| |||||||||| ||| |||||||||| ||||||||||||||||||||    
T  35215526 taattatttcatatgctttgttttggttgcttaattatcccttgctccacacatcaag-ttgttattggtgtgattttt 35215449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 34 - 134
Target Start/End: Complemental strand, 24162181 - 24162084
Alignment:
Q  34 tgttttttacttttgggttgtgtttataattgttccatatactttgttttggttgcttgattatcccttactcgacacatcaagtttgttattggtgtga 133  Q
    |||||| ||||||||| |||| ||||  |||||| |||| ||||| ||||||||||||||||||| ||| ||| |||||||||| |||||||||||||||    
T  24162181 tgttttctacttttggcttgtattta--attgtttcatacacttttttttggttgcttgattatctctttctccacacatcaag-ttgttattggtgtga 24162085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 60 - 137
Target Start/End: Original strand, 42453798 - 42453874
Alignment:
Q  60 taattgttccatatactttgttttggttgcttgattatcccttactcgacacatcaagtttgttattggtgtgatttt 137  Q
    ||||||||||||| | ||| ||||||||||||||||||| ||| ||| |||||||||| |||||||||||||||||||    
T  42453798 taattgttccatacattttattttggttgcttgattatctcttgctccacacatcaag-ttgttattggtgtgatttt 42453874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 75 - 148
Target Start/End: Complemental strand, 45332098 - 45332026
Alignment:
Q  75 ctttgttttggttgcttgattatcccttactcgacacatcaagtttgttattggtgtgatttttcaacgaattc 148  Q
    ||||||||||||||||| ||||||||||  || |||||||||| |||||||||||||||||||||| |||||||    
T  45332098 ctttgttttggttgcttaattatcccttgttccacacatcaag-ttgttattggtgtgatttttcatcgaattc 45332026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 25 - 140
Target Start/End: Complemental strand, 38414156 - 38414042
Alignment:
Q  25 ctctctcgctgttttttacttttgggttgtgtttataattgttccatatactttgttttggttgcttgattatcccttactcgacacatcaagtttgtta 124  Q
    |||||||| |||||| |||||||   |||||||||||||| ||||||| |||||||||| ||||| | |||||| | | ||| ||||| ||| ||||||     
T  38414156 ctctctcgttgttttctacttttaccttgtgtttataattattccatacactttgttttcgttgcctaattatcacgtgctccacacaccaattttgtt- 38414058  T
Q  125 ttggtgtgatttttca 140  Q
    ||||||||||||||||    
T  38414057 ttggtgtgatttttca 38414042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 60 - 138
Target Start/End: Complemental strand, 35217903 - 35217826
Alignment:
Q  60 taattgttccatatactttgttttggttgcttgattatcccttactcgacacatcaagtttgttattggtgtgattttt 138  Q
    ||||| |||||||  ||||||||||||||||| |||||| ||| ||| |||||||||| ||||||||||||||||||||    
T  35217903 taattattccatacgctttgttttggttgcttaattatctcttgctccacacatcaag-ttgttattggtgtgattttt 35217826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 40032051 - 40031968
Alignment:
Q  1 ttcttttgtgttctctcttcctttctctctcgctgttttttactt--ttgggttgtgtttataattgttccatatactttgtttt 83  Q
    ||||||||| |||||||||||||| |||||||||||| ||| ||   || | |||||||||||||||||||||||||||||||||    
T  40032051 ttcttttgtattctctcttccttt-tctctcgctgttgttttctacatttgcttgtgtttataattgttccatatactttgtttt 40031968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 66 - 138
Target Start/End: Original strand, 20592395 - 20592467
Alignment:
Q  66 ttccatatactttgttttggttgcttgattatcccttactcgacacatcaagtttgttattggtgtgattttt 138  Q
    ||||||| ||||||||||||||||||||||||  ||| ||| |||||||| || | |||||||||||||||||    
T  20592395 ttccatacactttgttttggttgcttgattattacttgctctacacatcacgtattttattggtgtgattttt 20592467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 7 - 157
Target Start/End: Complemental strand, 20146600 - 20146456
Alignment:
Q  7 tgtgttctctcttcctttctctctcgctgttttttacttttgggttgtgtttataattgttccatatactttgttttggttgcttgattatcccttactc 106  Q
    |||| |||||||| |||| ||||||| |||||| ||||||||  |||||||||||||||||||  ||  ||  | |||||||||||||||  | |||||     
T  20146600 tgtgatctctctttcttt-tctctcgttgttttctacttttgc-ttgtgtttataattgttccc-atg-ttgatattggttgcttgatta--ctttactt 20146507  T
Q  107 gacacatcaagtttgttattggtgtgatttttcaacgaattcgctacaatt 157  Q
     ||||||||||| | ||||||||||||||||||||||||||| | ||||||    
T  20146506 cacacatcaagtattttattggtgtgatttttcaacgaattcacaacaatt 20146456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 60 - 119
Target Start/End: Original strand, 42064819 - 42064878
Alignment:
Q  60 taattgttccatatactttgttttggttgcttgattatcccttactcgacacatcaagtt 119  Q
    ||||||||||||| |||||||||| |||||||||| ||||||| ||| ||||||||||||    
T  42064819 taattgttccatacactttgttttagttgcttgatcatcccttgctccacacatcaagtt 42064878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 26 - 138
Target Start/End: Complemental strand, 11578082 - 11577974
Alignment:
Q  26 tctctcgctgttttttacttttgggttgtgtttataattgttccatatactttgttttggttgcttgattatcccttactcgacacatcaagtttgttat 125  Q
    ||||||| |||||| ||||||||| ||||||||| | ||   ||||||||||| ||||||||||||||||||  |||  || ||||||||||||| ||||    
T  11578082 tctctcgttgttttctacttttggcttgtgtttaaactt---ccatatactttattttggttgcttgattattacttgttccacacatcaagttt-ttat 11577987  T
Q  126 tggtgtgattttt 138  Q
    |  ||||||||||    
T  11577986 taatgtgattttt 11577974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 78 - 148
Target Start/End: Complemental strand, 37962867 - 37962797
Alignment:
Q  78 tgttttggttgcttgattatcccttactcgacacatcaagtttgttattggtgtgatttttcaacgaattc 148  Q
    ||||||| || ||| |||||| ||||||| ||||||||||||| |||||| |||||||||||| |||||||    
T  37962867 tgttttgattacttaattatcacttactccacacatcaagtttattattgatgtgatttttcatcgaattc 37962797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 7 - 148
Target Start/End: Complemental strand, 17897238 - 17897105
Alignment:
Q  7 tgtgttctctcttcctttctctctcgctgttttttacttttgggttgtgtttataattgttccatatactttgttttggttgcttgattatcccttactc 106  Q
    ||||||||||||| |||||||||  | |||||| ||||||||  |||||||||||| |||  |||  ||||||||||||||||||||||||   || |||    
T  17897238 tgtgttctctctttctttctctc--gttgttttctacttttgc-ttgtgtttataactgt--catcaactttgttttggttgcttgattat--tttgctc 17897146  T
Q  107 gacacatcaagtttgttattggtgtgatttttcaacgaattc 148  Q
     ||||||||||| | |||||| ||| |||||| |||||||||    
T  17897145 cacacatcaagtattttattgatgt-attttttaacgaattc 17897105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 26 - 97
Target Start/End: Complemental strand, 31732754 - 31732685
Alignment:
Q  26 tctctcgctgttttttacttttgggttgtgtttataattgttccatatactttgttttggttgcttgattat 97  Q
    |||||||||||||| ||||||||| ||||| ||||||   ||||||| ||| ||||||||||||||||||||    
T  31732754 tctctcgctgttttctacttttggtttgtgattataa--cttccatacactctgttttggttgcttgattat 31732685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 108 - 148
Target Start/End: Complemental strand, 42923339 - 42923299
Alignment:
Q  108 acacatcaagtttgttattggtgtgatttttcaacgaattc 148  Q
    ||||||||||||||||||||||||| |||  ||||||||||    
T  42923339 acacatcaagtttgttattggtgtgttttcacaacgaattc 42923299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 96; Significance: 3e-47; HSPs: 3)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 22 - 157
Target Start/End: Original strand, 50325 - 50460
Alignment:
Q  22 tttctctctcgctgttttttacttttgggttgtgtttataattgttccatatactttgttttggttgcttgattatcccttactcgacacatcaagtttg 121  Q
    ||||||||| | |||||| ||||||||| ||||||||||||||||| |||| ||||||||||||||||||||||||||||| ||| ||||||||||||||    
T  50325 tttctctctagttgttttctacttttggcttgtgtttataattgtttcatacactttgttttggttgcttgattatcccttgctccacacatcaagtttg 50424  T
Q  122 ttattggtgtgatttttcaacgaattcgctacaatt 157  Q
    ||||||||||||||||||| ||||||||| ||||||    
T  50425 ttattggtgtgatttttcatcgaattcgcaacaatt 50460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005; HSP #2
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 22 - 150
Target Start/End: Original strand, 52324 - 52452
Alignment:
Q  22 tttctctctcgctgttttttacttttgggttgtgtttataattgttccatatactttgttttggttgcttgattatcccttactcgacacatcaagtttg 121  Q
    ||||||||| | |||||| ||||||||| ||||||||||||||||| |||| ||||||||||||||||||||||||||||| ||| ||||||||||||||    
T  52324 tttctctctagttgttttctacttttggcttgtgtttataattgtttcatacactttgttttggttgcttgattatcccttgctccacacatcaagtttg 52423  T
Q  122 ttattggtgtgatttttcaacgaattcgc 150  Q
    ||||||||||||||||||| |||||||||    
T  52424 ttattggtgtgatttttcatcgaattcgc 52452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005; HSP #3
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 34 - 149
Target Start/End: Complemental strand, 183599 - 183487
Alignment:
Q  34 tgttttttacttttgggttgtgtttataattgttccatatactttgttttggttgcttgattatcccttactcgacacatcaagtttgttattggtgtga 133  Q
    |||||| ||||||||| |||| ||||  ||||||||||| | ||||||| ||||||||||||||| ||| ||| |||||||||| |||||||||||||||    
T  183599 tgttttctacttttggcttgtattta--attgttccatacattttgtttcggttgcttgattatctcttgctccacacatcaag-ttgttattggtgtga 183503  T
Q  134 tttttcaacgaattcg 149  Q
    ||| ||| ||||||||    
T  183502 tttctcatcgaattcg 183487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 96; Significance: 3e-47; HSPs: 67)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 1 - 132
Target Start/End: Complemental strand, 22251583 - 22251452
Alignment:
Q  1 ttcttttgtgttctctcttcctttctctctcgctgttttttacttttgggttgtgtttataattgttccatatactttgttttggttgcttgattatccc 100  Q
    |||||||||||||| ||||||||||||||| |||||||| ||||||||| ||||||||||||||||| |||| ||||||||||||||| |||||||||||    
T  22251583 ttcttttgtgttctatcttcctttctctcttgctgttttctacttttggcttgtgtttataattgtttcatacactttgttttggttgtttgattatccc 22251484  T
Q  101 ttactcgacacatcaagtttgttattggtgtg 132  Q
    || ||| |||||||||||||||||||||||||    
T  22251483 ttgctcaacacatcaagtttgttattggtgtg 22251452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 1 - 157
Target Start/End: Complemental strand, 13099472 - 13099314
Alignment:
Q  1 ttcttttgtgttctctcttcctttctctctcgctgtttttt---acttttgggttgtgtttataattgttccatatactttgttttggttgcttgattat 97  Q
    |||||||||||||||||||||||| |||||||||||| |||   |||||||| |||||||||||||||||||||| ||||||||||||||| ||||  ||    
T  13099472 ttcttttgtgttctctcttccttt-tctctcgctgttgttttctacttttggcttgtgtttataattgttccatacactttgttttggttgtttgacgat 13099374  T
Q  98 cccttactcgacacatcaagtttgttattggtgtgatttttcaacgaattcgctacaatt 157  Q
    ||||| ||| ||||||||||||||||||||||||||||||||| ||||||| | ||||||    
T  13099373 cccttgctccacacatcaagtttgttattggtgtgatttttcatcgaattcacaacaatt 13099314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 1 - 129
Target Start/End: Complemental strand, 39145984 - 39145856
Alignment:
Q  1 ttcttttgtgttctctcttcctttctctctcgctgttttttacttttgggttgtgtttataattgttccatatactttgttttggttgcttgattatccc 100  Q
    |||||||||||||||||||||||||||||||| |||||| ||||||||| |||||||||||||||||  ||| | ||||||||||||||||||||||| |    
T  39145984 ttcttttgtgttctctcttcctttctctctcgttgttttctacttttggtttgtgtttataattgtttaatacaatttgttttggttgcttgattatcac 39145885  T
Q  101 ttactcgacacatcaagtttgttattggt 129  Q
    |||||| ||||||||||||||||||||||    
T  39145884 ttactccacacatcaagtttgttattggt 39145856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 1 - 150
Target Start/End: Complemental strand, 42330995 - 42330850
Alignment:
Q  1 ttcttttgtgttctctcttcctttctctctcgctgttttttacttttgggttgtgtttataattgttccatatactttgttttggttgcttgattatccc 100  Q
    |||||||||||||||||||    |||||||||||||||| ||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||     
T  42330995 ttcttttgtgttctctctt----tctctctcgctgttttctacttttggcttgtgtttataattgttccatacactttgttttggttgcttgattatcca 42330900  T
Q  101 ttactcgacacatcaagtttgttattggtgtgatttttcaacgaattcgc 150  Q
    || ||| ||||||||||||| ||||||| ||||||| ||| |||||||||    
T  42330899 ttgctccacacatcaagtttattattggcgtgatttctcatcgaattcgc 42330850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 1 - 139
Target Start/End: Original strand, 443887 - 444027
Alignment:
Q  1 ttcttttgtgttctctcttcctttctc--tctcgctgttttttacttttgggttgtgtttataattgttccatatactttgttttggttgcttgattatc 98  Q
    |||||||||||||||||||||||||||  |||||||||||| ||||||||| ||||| |||||||||||| ||| |||||||||||||||||||| |||     
T  443887 ttcttttgtgttctctcttcctttctctctctcgctgttttctacttttggcttgtgattataattgttcaatacactttgttttggttgcttgactatt 443986  T
Q  99 ccttactcgacacatcaagtttgttattggtgtgatttttc 139  Q
    |||| ||| |||||||||||||||||||||||||| |||||    
T  443987 ccttgctccacacatcaagtttgttattggtgtgagttttc 444027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 1 - 145
Target Start/End: Original strand, 9679350 - 9679495
Alignment:
Q  1 ttcttttgtgttctctcttcctttctctctcgctgttttttacttttgggttgtgtttataattgttccatatactttg-ttttggttgcttgattatcc 99  Q
    |||||||||||| |||||||||||||||||||||||||| ||||||||  |||||||||||||||||||||| |||||| |||||||||| ||||||||     
T  9679350 ttcttttgtgttatctcttcctttctctctcgctgttttctacttttgacttgtgtttataattgttccatacactttgattttggttgcctgattatca 9679449  T
Q  100 cttactcgacacatcaagtttgttattggtgtgatttttcaacgaa 145  Q
    ||| ||| ||||||||||||||||||||||||| ||| ||| ||||    
T  9679450 cttgctccacacatcaagtttgttattggtgtgttttctcatcgaa 9679495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 1 - 129
Target Start/End: Original strand, 21990441 - 21990570
Alignment:
Q  1 ttcttttgtgttctctcttcctttctctctcgctgttttttacttttgggttgtgtttataattgttccatatactttg-ttttggttgcttgattatcc 99  Q
    ||||||||||||||||||||||||||||||||||||||  ||||||||| |||||||||||||||||||||| |||||| |||||||||| |||||||||    
T  21990441 ttcttttgtgttctctcttcctttctctctcgctgtttgctacttttggcttgtgtttataattgttccatacactttgattttggttgcctgattatcc 21990540  T
Q  100 cttactcgacacatcaagtttgttattggt 129  Q
    ||| ||| ||||||||||||| ||||||||    
T  21990541 cttgctccacacatcaagtttattattggt 21990570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 1 - 157
Target Start/End: Original strand, 44724870 - 44725025
Alignment:
Q  1 ttcttttgtgttctctcttcctttctctctcgctgttttttacttttgggttgtgtttataat-tgttccatatactttgttttggttgcttgattatcc 99  Q
    |||||||||||||||||||| ||||||||  | |||||| ||||||||| ||||||||||||| ||||||||| |||||||||||||||||||| |||||    
T  44724870 ttcttttgtgttctctcttcatttctctc--gttgttttctacttttggcttgtgtttataatatgttccatacactttgttttggttgcttgactatcc 44724967  T
Q  100 cttactcgacacatcaagtttgttattggtgtgatttttcaacgaattcgctacaatt 157  Q
    ||| ||| ||||||||||||||||||||||||| |||  || ||||||||| ||||||    
T  44724968 cttgctccacacatcaagtttgttattggtgtgttttcccatcgaattcgcaacaatt 44725025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 1 - 157
Target Start/End: Complemental strand, 4295932 - 4295778
Alignment:
Q  1 ttcttttgtgttctctcttcctttctctctcgctgttttttacttttgggttgtgtttataattgttccatatactttgttttggttgcttgattatccc 100  Q
    |||||||||||||||||||| ||||||||  ||  |||| ||||||||| |||||||||| ||||||| ||| ||||||||||||||||||||| || ||    
T  4295932 ttcttttgtgttctctcttcttttctctc--gccattttctacttttggcttgtgtttattattgttctatacactttgttttggttgcttgatgattcc 4295835  T
Q  101 ttactcgacacatcaagtttgttattggtgtgatttttcaacgaattcgctacaatt 157  Q
    || ||| ||||||||||||||||||||||||||||||||| |||||| || ||||||    
T  4295834 ttgctccacacatcaagtttgttattggtgtgatttttcatcgaatttgcaacaatt 4295778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 6 - 157
Target Start/End: Original strand, 21678360 - 21678509
Alignment:
Q  6 ttgtgttctctcttcctttctctctcgctgttttttacttttgggttgtgtttataattgttccatatactttgttttggttgcttgattatcccttact 105  Q
    ||||||||||||||| |||||| |  |||||||| ||||||||| ||||||||||||||||||| || |||||||||||||||||||||||| |||| ||    
T  21678360 ttgtgttctctcttcttttctccc--gctgttttctacttttggcttgtgtttataattgttccttacactttgttttggttgcttgattattccttgct 21678457  T
Q  106 cgacacatcaagtttgttattggtgtgatttttcaacgaattcgctacaatt 157  Q
    | ||| |||||||||||||| |||||||||||||| ||||||| | ||||||    
T  21678458 ccacaaatcaagtttgttatcggtgtgatttttcatcgaattcacaacaatt 21678509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 1 - 150
Target Start/End: Complemental strand, 31435044 - 31434896
Alignment:
Q  1 ttcttttgtgttctctcttcctttctctctcgctgttttttacttttgggttgtgtttataattgttccatatactttgttttggttgcttgattatccc 100  Q
    |||||||||||||||||||| ||||||||  | |||||| ||||||||| ||||||||||||||||||| || ||||| ||||| |||||||||||| ||    
T  31435044 ttcttttgtgttctctcttcttttctctc--gttgttttctacttttggcttgtgtttataattgttccttacactttattttgattgcttgattattcc 31434947  T
Q  101 ttactcgacacatcaagtttgttattggtgtgatttt-tcaacgaattcgc 150  Q
    || ||| |||||||||||||||||||||||||||||| ||| |||||||||    
T  31434946 ttgctccacacatcaagtttgttattggtgtgattttctcatcgaattcgc 31434896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 1 - 158
Target Start/End: Original strand, 26804801 - 26804959
Alignment:
Q  1 ttcttttgtgttctctcttcctttctctctc-gctgttttttacttttgggttgtgtttataattgttccatatactttgttttggttgcttgattatcc 99  Q
    |||||||||||||||||||| ||||||||   | |||||| ||||||||  |||||||||||||||||||||| |||||||||||||||||||| |||||    
T  26804801 ttcttttgtgttctctcttcttttctctcgatgttgttttctacttttgacttgtgtttataattgttccatacactttgttttggttgcttgactatcc 26804900  T
Q  100 cttactcgacacatcaagtttgttattggtgtgatttttcaacgaattcgctacaattt 158  Q
     || ||| ||||||||| ||||||||||||||||||| ||| | ||||||| |||||||    
T  26804901 tttgctccacacatcaaatttgttattggtgtgatttctcatcaaattcgcaacaattt 26804959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 1 - 158
Target Start/End: Original strand, 42223449 - 42223604
Alignment:
Q  1 ttcttttgtgttctctcttcctttctctctcgctgttttttacttttgggttgtgtttataattgttccatatactttgttttggttgcttgattatccc 100  Q
    ||||||||| |||||||||| ||||||||    |||||| ||||||||  |||||||||||||||||  ||| ||||| |||||||||||||||||||||    
T  42223449 ttcttttgttttctctcttcttttctctcat--tgttttctacttttgccttgtgtttataattgttttatacactttattttggttgcttgattatccc 42223546  T
Q  101 ttactcgacacatcaagtttgttattggtgtgatttttcaacgaattcgctacaattt 158  Q
    |||||| ||||||||||||||||||||||||| ||||| | ||||||||| |||||||    
T  42223547 ttactccacacatcaagtttgttattggtgtgtttttttatcgaattcgcaacaattt 42223604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 1 - 150
Target Start/End: Complemental strand, 21592141 - 21591993
Alignment:
Q  1 ttcttttgtgttctctcttcctttctctctcgctgttttttacttttgggttgtgtttataattgttccatatactttgttttggttgcttgattatccc 100  Q
    |||||||||||||||||||| |||||||||||||||||| ||||||||| |||||||||||||||||||||| ||||| |||||||||  |||||||| |    
T  21592141 ttcttttgtgttctctcttcttttctctctcgctgttttctacttttggcttgtgtttataattgttccatacacttt-ttttggttgtctgattatcac 21592043  T
Q  101 ttactcgacacatcaagtttgttattggtgtgatttttcaacgaattcgc 150  Q
    || ||| |||||||||||||||||| |  ||| ||| ||| |||||||||    
T  21592042 ttgctccacacatcaagtttgttatagccgtgttttctcatcgaattcgc 21591993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 6 - 150
Target Start/End: Complemental strand, 27306225 - 27306080
Alignment:
Q  6 ttgtgttctctcttcctttctctctc-gctgttttttacttttgggttgtgtttataattgttccatatactttgttttggttgcttgattatcccttac 104  Q
    ||||||||||||||| |||||||| | | |||||| | ||||||| ||||| |||||||||||||||| |||||||||||||||||||| ||||||||      
T  27306225 ttgtgttctctcttcttttctctcgctgttgttttcttcttttggcttgtgattataattgttccatacactttgttttggttgcttgactatcccttgt 27306126  T
Q  105 tcgacacatcaagtttgttattggtgtgatttttcaacgaattcgc 150  Q
    || ||||||||||||||||||||||||||| | ||| |||||||||    
T  27306125 tccacacatcaagtttgttattggtgtgatctctcatcgaattcgc 27306080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 4 - 132
Target Start/End: Original strand, 9681114 - 9681243
Alignment:
Q  4 ttttgtgttctctcttcctttctctctcgctgttttttacttttgggttgtgtttataattgttccatatactttg-ttttggttgcttgattatccctt 102  Q
    ||||||||||||||||||||||||||||| | |||| ||||||||| |||||||||||||||||||||| |||||| |||||||||  | |||||| |||    
T  9681114 ttttgtgttctctcttcctttctctctcgatcttttctacttttggcttgtgtttataattgttccatacactttgattttggttgtctaattatcactt 9681213  T
Q  103 actcgacacatcaagtttgttattggtgtg 132  Q
      || |||||||||||||||||||||||||    
T  9681214 gttccacacatcaagtttgttattggtgtg 9681243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 1 - 138
Target Start/End: Original strand, 11355549 - 11355688
Alignment:
Q  1 ttcttttgtgttctctcttcctt-tctctctcgctgttttttacttttgggttgtgtttataattgttccatatactttg-ttttggttgcttgattatc 98  Q
    ||||||| ||||||||||| ||| ||||||| | |||||| ||||||||| |||||||||||||||||||||| |||||| |||||||||| |||||||     
T  11355549 ttcttttatgttctctcttacttctctctcttgttgttttctacttttggcttgtgtttataattgttccatacactttgtttttggttgcctgattatt 11355648  T
Q  99 ccttactcgacacatcaagtttgttattggtgtgattttt 138  Q
    |||| ||| ||||||||| ||| |||||||||||||||||    
T  11355649 ccttgctccacacatcaaatttattattggtgtgattttt 11355688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 1 - 139
Target Start/End: Complemental strand, 37412123 - 37411982
Alignment:
Q  1 ttcttttgtgttctctcttcctttct---ctctcgctgttttttacttttgggttgtgtttataattgttccatatactttgttttggttgcttgattat 97  Q
    ||||||||||||||| ||||  ||||   |||||| |||||| || |||||| ||||| |||||||||||||||| ||||||||||||||||||||||||    
T  37412123 ttcttttgtgttctcccttctcttcttttctctcgttgttttctagttttggcttgtgattataattgttccatacactttgttttggttgcttgattat 37412024  T
Q  98 cccttactcgacacatcaagtttgttattggtgtgatttttc 139  Q
     ||||  || |||||||||||||||||||||||||| |||||    
T  37412023 tccttgttccacacatcaagtttgttattggtgtgagttttc 37411982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 3 - 148
Target Start/End: Original strand, 21680323 - 21680466
Alignment:
Q  3 cttttgtgttctctcttcctttctctctcgctgttttttacttttgggttgtgtttataattgttccatatactttgttttggttgcttgattatccctt 102  Q
    ||||| |||||||||||| ||||||||  | |||||| ||||||||| |||||||||||||||||||||| |||||||||| ||||| ||||||| ||||    
T  21680323 cttttttgttctctcttcttttctctc--gttgttttctacttttggcttgtgtttataattgttccatacactttgtttttgttgcatgattattcctt 21680420  T
Q  103 actcgacacatcaagtttgttattggtgtgatttttcaacgaattc 148  Q
     ||  |||||||||| ||||||||||||||  |||||| |||||||    
T  21680421 gcttcacacatcaagcttgttattggtgtgggttttcatcgaattc 21680466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 34 - 157
Target Start/End: Complemental strand, 7471938 - 7471818
Alignment:
Q  34 tgttttttacttttgggttgtgtttataattgttccatatactttgttttggttgcttgattatcccttactcgacacatcaagtttgttattggtgtga 133  Q
    |||||| ||||||||| |||| ||||  ||||||||||| ||||||||||||||||||||||||||||| ||| |||||||||| |||||||||||||||    
T  7471938 tgttttctacttttggcttgtattta--attgttccatacactttgttttggttgcttgattatcccttgctccacacatcaag-ttgttattggtgtga 7471842  T
Q  134 tttttcaacgaattcgctacaatt 157  Q
    |||||||  |||||||| ||||||    
T  7471841 tttttcattgaattcgcaacaatt 7471818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 34 - 157
Target Start/End: Original strand, 38394317 - 38394437
Alignment:
Q  34 tgttttttacttttgggttgtgtttataattgttccatatactttgttttggttgcttgattatcccttactcgacacatcaagtttgttattggtgtga 133  Q
    |||||| ||||||||| |||| ||||  ||||||||||| ||||||||||||||||||||||||||||| ||| |||||||||| |||||||||||||||    
T  38394317 tgttttctacttttggcttgtattta--attgttccatacactttgttttggttgcttgattatcccttgctccacacatcaag-ttgttattggtgtga 38394413  T
Q  134 tttttcaacgaattcgctacaatt 157  Q
    ||||||| ||||||| | ||||||    
T  38394414 tttttcatcgaattcacaacaatt 38394437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 34 - 155
Target Start/End: Original strand, 11759458 - 11759576
Alignment:
Q  34 tgttttttacttttgggttgtgtttataattgttccatatactttgttttggttgcttgattatcccttactcgacacatcaagtttgttattggtgtga 133  Q
    |||||| ||||||||| |||| ||||  ||||||||||| ||||||||||||||||||||||||| ||| ||| |||||||||| |||||||||||||||    
T  11759458 tgttttctacttttggcttgtattta--attgttccatacactttgttttggttgcttgattatctcttgctccacacatcaag-ttgttattggtgtga 11759554  T
Q  134 tttttcaacgaattcgctacaa 155  Q
    ||||||| ||||||||| ||||    
T  11759555 tttttcatcgaattcgcaacaa 11759576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 60 - 150
Target Start/End: Original strand, 28487908 - 28487997
Alignment:
Q  60 taattgttccatatactttgttttggttgcttgattatcccttactcgacacatcaagtttgttattggtgtgatttttcaacgaattcgc 150  Q
    ||||||||||||| ||||||||||||||||||||||||||||| ||| |||||||||| |||||||||||||||||||||| |||||||||    
T  28487908 taattgttccatacactttgttttggttgcttgattatcccttgctccacacatcaag-ttgttattggtgtgatttttcatcgaattcgc 28487997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 8 - 148
Target Start/End: Original strand, 24465832 - 24465969
Alignment:
Q  8 gtgttctctcttcctttctctctcgctgttttttacttttgggttgtgtttataattgttccatatactttgttttggttgcttgattatcccttactcg 107  Q
    |||||||||||| |||| |||||||||||||| ||||||||| ||||| |||||| |  |||||| |||||||||||||||||||| |||| |||  ||     
T  24465832 gtgttctctctttcttt-tctctcgctgttttctacttttggtttgtgattataact--tccatacactttgttttggttgcttgaatatcacttgttcc 24465928  T
Q  108 acacatcaagtttgttattggtgtgatttttcaacgaattc 148  Q
    ||||||||| ||| ||||||||||||||||||| |||||||    
T  24465929 acacatcaaatttattattggtgtgatttttcatcgaattc 24465969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 34 - 157
Target Start/End: Original strand, 20297693 - 20297813
Alignment:
Q  34 tgttttttacttttgggttgtgtttataattgttccatatactttgttttggttgcttgattatcccttactcgacacatcaagtttgttattggtgtga 133  Q
    |||||| ||||||||| |||| ||||  ||||||||||| ||||||||||||||||||||||||| ||| ||| |||||||||| |||||||||||||||    
T  20297693 tgttttctacttttggcttgtattta--attgttccatacactttgttttggttgcttgattatctcttgctccacacatcaag-ttgttattggtgtga 20297789  T
Q  134 tttttcaacgaattcgctacaatt 157  Q
    ||||||| ||||||| | ||||||    
T  20297790 tttttcatcgaattcacaacaatt 20297813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 34 - 150
Target Start/End: Complemental strand, 9027151 - 9027038
Alignment:
Q  34 tgttttttacttttgggttgtgtttataattgttccatatactttgttttggttgcttgattatcccttactcgacacatcaagtttgttattggtgtga 133  Q
    |||||| ||||||||| |||| ||||||| | |  |||| ||||||||||||||||||||||||||||| ||| |||||||||| |||||||||||||||    
T  9027151 tgttttctacttttggcttgtatttataacttt--catacactttgttttggttgcttgattatcccttgctccacacatcaag-ttgttattggtgtga 9027055  T
Q  134 tttttcaacgaattcgc 150  Q
    ||||||| |||||||||    
T  9027054 tttttcatcgaattcgc 9027038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 34 - 157
Target Start/End: Original strand, 28485896 - 28486016
Alignment:
Q  34 tgttttttacttttgggttgtgtttataattgttccatatactttgttttggttgcttgattatcccttactcgacacatcaagtttgttattggtgtga 133  Q
    |||||| ||||||||| |||| ||||  ||||||||||| | ||||||||||||||||||||||||||| ||| ||| |||||| |||||||||||||||    
T  28485896 tgttttctacttttggcttgtattta--attgttccatacattttgttttggttgcttgattatcccttgctccacatatcaag-ttgttattggtgtga 28485992  T
Q  134 tttttcaacgaattcgctacaatt 157  Q
    ||||||| ||||||| | ||||||    
T  28485993 tttttcatcgaattcacaacaatt 28486016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 34 - 136
Target Start/End: Original strand, 35960 - 36059
Alignment:
Q  34 tgttttttacttttgggttgtgtttataattgttccatatactttgttttggttgcttgattatcccttactcgacacatcaagtttgttattggtgtga 133  Q
    |||||| ||||||||| |||| ||||  ||||||||||| ||||||||||||||||||||||||||||| ||| |||||||||| |||||||||||||||    
T  35960 tgttttctacttttggtttgtattta--attgttccatacactttgttttggttgcttgattatcccttgctccacacatcaag-ttgttattggtgtga 36056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 34 - 140
Target Start/End: Original strand, 20299791 - 20299894
Alignment:
Q  34 tgttttttacttttgggttgtgtttataattgttccatatactttgttttggttgcttgattatcccttactcgacacatcaagtttgttattggtgtga 133  Q
    |||||| ||||||||| |||| ||||  ||||||||||| ||||||||||||||||||||||||| ||| ||| |||||||||| |||||||||||||||    
T  20299791 tgttttctacttttggcttgtattta--attgttccatacactttgttttggttgcttgattatctcttgctccacacatcaag-ttgttattggtgtga 20299887  T
Q  134 tttttca 140  Q
    |||||||    
T  20299888 tttttca 20299894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 157
Target Start/End: Original strand, 24748886 - 24749038
Alignment:
Q  1 ttcttttgtgttctctcttcctttctctctcgctgttttttacttttgggttgtgtttataattgttccatatactttgttttggttgcttgattatccc 100  Q
    |||||||||||||||||||  ||||||||  | |||||| ||||||||  ||||| |||||| |  |||||| ||||||||||||||| |||||||||||    
T  24748886 ttcttttgtgttctctctttatttctctc--gttgttttctacttttgt-ttgtgattataact--tccatacactttgttttggttgtttgattatccc 24748980  T
Q  101 ttactcgacacatcaagtttgttattggtgtgatttt-tcaacgaattcgctacaatt 157  Q
    || ||| ||||||||||||||||||||||||| |||| ||| ||||||| | ||||||    
T  24748981 ttgctccacacatcaagtttgttattggtgtggttttctcatcgaattcacaacaatt 24749038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 34 - 148
Target Start/End: Original strand, 25542859 - 25542970
Alignment:
Q  34 tgttttttacttttgggttgtgtttataattgttccatatactttgttttggttgcttgattatcccttactcgacacatcaagtttgttattggtgtga 133  Q
    |||||| ||||||||| |||| ||||  ||||||||||| | ||||||||| ||||||||||||||||| ||| |||||||||| |||||||||||||||    
T  25542859 tgttttctacttttggcttgtattta--attgttccatacattttgttttgattgcttgattatcccttgctccacacatcaag-ttgttattggtgtga 25542955  T
Q  134 tttttcaacgaattc 148  Q
    ||||||| |||||||    
T  25542956 tttttcatcgaattc 25542970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 34 - 155
Target Start/End: Complemental strand, 40836701 - 40836582
Alignment:
Q  34 tgttttttacttttgggttgtgtttataattgttccatatactttgttttggttgcttgattatcccttactcgacacatcaagtttgttattggtgtga 133  Q
    |||||| ||||||||| |||| ||||  ||||||||||| ||||||||||||||| ||||||||||||| ||| |||||||||| |||||||||||||||    
T  40836701 tgttttctacttttggcttgtattta--attgttccatacactttgttttggttgtttgattatcccttgctccacacatcaag-ttgttattggtgtga 40836605  T
Q  134 tttttc-aacgaattcgctacaa 155  Q
    |||||| | ||||||||| ||||    
T  40836604 tttttcgatcgaattcgcaacaa 40836582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 60 - 150
Target Start/End: Original strand, 44919 - 45008
Alignment:
Q  60 taattgttccatatactttgttttggttgcttgattatcccttactcgacacatcaagtttgttattggtgtgatttttcaacgaattcgc 150  Q
    ||||||||||||| |||||||||||||||||||||||||| || ||| |||||||||| |||||||||||||||||| ||| |||||||||    
T  44919 taattgttccatacactttgttttggttgcttgattatccattgctccacacatcaag-ttgttattggtgtgatttctcatcgaattcgc 45008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 34 - 148
Target Start/End: Original strand, 1606710 - 1606821
Alignment:
Q  34 tgttttttacttttgggttgtgtttataattgttccatatactttgttttggttgcttgattatcccttactcgacacatcaagtttgttattggtgtga 133  Q
    |||||| ||||||||| |||| ||||  ||| |||||||  ||||||||||||||||| |||||||||| ||| |||||||||| |||||||||||||||    
T  1606710 tgttttctacttttggcttgtattta--attattccatacgctttgttttggttgcttaattatcccttgctccacacatcaag-ttgttattggtgtga 1606806  T
Q  134 tttttcaacgaattc 148  Q
    ||||||| |||||||    
T  1606807 tttttcatcgaattc 1606821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 34 - 136
Target Start/End: Original strand, 1850312 - 1850411
Alignment:
Q  34 tgttttttacttttgggttgtgtttataattgttccatatactttgttttggttgcttgattatcccttactcgacacatcaagtttgttattggtgtga 133  Q
    |||||| ||||||||| |||| ||||  |||||| |||| ||||||||||||||||||||||||||||| ||| |||||||||| |||||||||||||||    
T  1850312 tgttttctacttttggcttgtattta--attgtttcatacactttgttttggttgcttgattatcccttgctccacacatcaag-ttgttattggtgtga 1850408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 150
Target Start/End: Original strand, 20626329 - 20626477
Alignment:
Q  1 ttcttttgtgttctctcttcctttctctctcgctgtttttt---acttttgggttgtgtttataattgttccatatactttgttttggttgcttgattat 97  Q
    ||||||||||||||||| || ||| |||||||||||| |||   |||||||| || | ||||||| |  |||||| ||||| ||||||||||||||||||    
T  20626329 ttcttttgtgttctctcatctttt-tctctcgctgttgttttctacttttggcttatatttataact--tccatacactttattttggttgcttgattat 20626425  T
Q  98 cccttactcgacacatcaagtttgttattggtgtgatttttcaacgaattcgc 150  Q
    | ||| ||| ||||||| || |||||||||||||||||||||| |||||||||    
T  20626426 ctcttgctccacacatc-aggttgttattggtgtgatttttcatcgaattcgc 20626477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 150
Target Start/End: Original strand, 20630220 - 20630368
Alignment:
Q  1 ttcttttgtgttctctcttcctttctctctcgctgtttttt---acttttgggttgtgtttataattgttccatatactttgttttggttgcttgattat 97  Q
    ||||||||||||||||| || ||| |||||||||||| |||   |||||||| || | ||||||| |  |||||| ||||| ||||||||||||||||||    
T  20630220 ttcttttgtgttctctcatctttt-tctctcgctgttgttttctacttttggcttatatttataact--tccatacactttattttggttgcttgattat 20630316  T
Q  98 cccttactcgacacatcaagtttgttattggtgtgatttttcaacgaattcgc 150  Q
    | ||| ||| ||||||| || |||||||||||||||||||||| |||||||||    
T  20630317 ctcttgctccacacatc-aggttgttattggtgtgatttttcatcgaattcgc 20630368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 150
Target Start/End: Original strand, 20642639 - 20642787
Alignment:
Q  1 ttcttttgtgttctctcttcctttctctctcgctgtttttt---acttttgggttgtgtttataattgttccatatactttgttttggttgcttgattat 97  Q
    ||||||||||||||||| || ||| |||||||||||| |||   |||||||| || | ||||||| |  |||||| ||||| ||||||||||||||||||    
T  20642639 ttcttttgtgttctctcatctttt-tctctcgctgttgttttctacttttggcttatatttataact--tccatacactttattttggttgcttgattat 20642735  T
Q  98 cccttactcgacacatcaagtttgttattggtgtgatttttcaacgaattcgc 150  Q
    | ||| ||| ||||||| || |||||||||||||||||||||| |||||||||    
T  20642736 ctcttgctccacacatc-aggttgttattggtgtgatttttcatcgaattcgc 20642787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 34 - 155
Target Start/End: Complemental strand, 7469980 - 7469863
Alignment:
Q  34 tgttttttacttttgggttgtgtttataattgttccatatactttgttttggttgcttgattatcccttactcgacacatcaagtttgttattggtgtga 133  Q
    |||||| ||||||||| |||| ||||  ||||||||||| |||||||||| |||||||||||||||| | ||| |||||||||  |||||||||||||||    
T  7469980 tgttttctacttttggcttgtattta--attgttccatacactttgttttagttgcttgattatccc-tgctccacacatcaa-attgttattggtgtga 7469885  T
Q  134 tttttcaacgaattcgctacaa 155  Q
    ||||||| ||||||||| ||||    
T  7469884 tttttcatcgaattcgcaacaa 7469863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 148
Target Start/End: Original strand, 22394014 - 22394155
Alignment:
Q  1 ttcttttgtgttctctcttcctttctctctcgctgttttttacttttgggttgtgtttataattgttccatatactttgttttggttgcttgattatccc 100  Q
    ||||||||||||||||||| |||  ||||||| |||||| ||||||||| ||||| ||||||   ||||||| ||||||||||||||| |||| |||| |    
T  22394014 ttcttttgtgttctctctttctt--tctctcgttgttttctacttttggtttgtgattataa--cttccatacactttgttttggttgtttgactatcac 22394109  T
Q  101 ttactcgacacatcaagtttgttattggtgtgatttttcaacgaattc 148  Q
    || |||  |||||||||||| |||||||||  |||||||| |||||||    
T  22394110 ttgctc--cacatcaagtttattattggtggaatttttcatcgaattc 22394155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 60 - 150
Target Start/End: Original strand, 48458008 - 48458096
Alignment:
Q  60 taattgttccatatactttgttttggttgcttgattatcccttactcgacacatcaagtttgttattggtgtgatttttcaacgaattcgc 150  Q
    ||||||||||||| ||||||||||||||||||||||||| ||| ||| |||||||||| ||||||||||||||| |||||| |||||||||    
T  48458008 taattgttccatacactttgttttggttgcttgattatctcttgctccacacatcaag-ttgttattggtgtga-ttttcatcgaattcgc 48458096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 60 - 137
Target Start/End: Complemental strand, 7092147 - 7092070
Alignment:
Q  60 taattgttccatatactttgttttggttgcttgattatcccttactcgacacatcaagtttgttattggtgtgatttt 137  Q
    ||||||||||| | ||||| |||||||||||||| |||||||| ||| ||||||||||||||||||||||||||||||    
T  7092147 taattgttccacacactttattttggttgcttgactatcccttgctccacacatcaagtttgttattggtgtgatttt 7092070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 60 - 157
Target Start/End: Complemental strand, 7094394 - 7094298
Alignment:
Q  60 taattgttccatatactttgttttggttgcttgattatcccttactcgacacatcaagtttgttattggtgtgatttttcaacgaattcgctacaatt 157  Q
    ||||||||||| | ||||| |||||||||||||| ||| |||| ||| |||||||||||||||||||||||||| |||||| ||||||||| ||||||    
T  7094394 taattgttccacacactttattttggttgcttgactatgccttgctccacacatcaagtttgttattggtgtga-ttttcatcgaattcgcaacaatt 7094298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 34 - 138
Target Start/End: Complemental strand, 7351609 - 7351508
Alignment:
Q  34 tgttttttacttttgggttgtgtttataattgttccatatactttgttttggttgcttgattatcccttactcgacacatcaagtttgttattggtgtga 133  Q
    |||||| ||||||||| |||| ||||||| | |  |||| |||||||||||||||||| |||||||||||||| |||||||||| |||||||||||||||    
T  7351609 tgttttctacttttggcttgtatttataacttt--catacactttgttttggttgcttaattatcccttactccacacatcaag-ttgttattggtgtga 7351513  T
Q  134 ttttt 138  Q
    |||||    
T  7351512 ttttt 7351508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 6 - 148
Target Start/End: Complemental strand, 27832632 - 27832494
Alignment:
Q  6 ttgtgttctctcttcctttctctctcgctgttttttacttttgggttgtgtttataattgttccatatactttgttttggttgcttgattatcccttact 105  Q
    ||||||| |||||| ||||||||| |  |||||| ||||||||| ||||| |||||| |  |||||| |||||||||||||| |||||||||  | | ||    
T  27832632 ttgtgttatctctttctttctctcac--tgttttctacttttggtttgtgattataact--tccatacactttgttttggttacttgattatttcctgct 27832537  T
Q  106 cgacacatcaagtttgttattggtgtgatttttcaacgaattc 148  Q
    | |||||| ||||||||||||||| |||||||||| |||||||    
T  27832536 ccacacattaagtttgttattggtatgatttttcatcgaattc 27832494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 34 - 148
Target Start/End: Original strand, 3036055 - 3036166
Alignment:
Q  34 tgttttttacttttgggttgtgtttataattgttccatatactttgttttggttgcttgattatcccttactcgacacatcaagtttgttattggtgtga 133  Q
    |||||| ||||||||| |||| ||||  ||||||||||| ||||||||||||||||||||||||| ||| ||| | |||||||  |||||||||||||||    
T  3036055 tgttttctacttttggcttgtattta--attgttccatacactttgttttggttgcttgattatctcttgctccaaacatcaa-attgttattggtgtga 3036151  T
Q  134 tttttcaacgaattc 148  Q
    ||| ||| |||||||    
T  3036152 tttctcatcgaattc 3036166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 34 - 148
Target Start/End: Original strand, 18345872 - 18345983
Alignment:
Q  34 tgttttttacttttgggttgtgtttataattgttccatatactttgttttggttgcttgattatcccttactcgacacatcaagtttgttattggtgtga 133  Q
    |||||| ||||||||| |||| ||||  ||||||||||| |||||||||||||||||||| |||||||| ||| |||||||||| ||||| ||||||||     
T  18345872 tgttttctacttttggcttgtattta--attgttccatacactttgttttggttgcttgactatcccttgctccacacatcaag-ttgttgttggtgtgt 18345968  T
Q  134 tttttcaacgaattc 148  Q
    |||  ||||||||||    
T  18345969 tttcacaacgaattc 18345983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 36 - 150
Target Start/End: Original strand, 38396972 - 38397082
Alignment:
Q  36 ttttttacttttgggttgtgtttataattgttccatatactttgttttggttgcttgattatcccttactcgacacatcaagtttgttattggtgtgatt 135  Q
    |||| ||||||||| |||| ||||  ||||||| ||| |||||||||||||||||| |||||||||| ||| |||||||||| ||||||||||||||| |    
T  38396972 ttttctacttttggcttgtattta--attgttctatacactttgttttggttgctttattatcccttgctccacacatcaag-ttgttattggtgtga-t 38397067  T
Q  136 tttcaacgaattcgc 150  Q
    ||||| |||||||||    
T  38397068 tttcatcgaattcgc 38397082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 37 - 138
Target Start/End: Complemental strand, 7349232 - 7349134
Alignment:
Q  37 tttttacttttgggttgtgtttataattgttccatatactttgttttggttgcttgattatcccttactcgacacatcaagtttgttattggtgtgattt 136  Q
    ||||||||||||| |||| ||||||| | |  |||| ||||| |||||||||||| |||||||||||||| |||||||||| ||||||||||||||||||    
T  7349232 tttttacttttggcttgtatttataacttt--catacactttattttggttgcttaattatcccttactccacacatcaag-ttgttattggtgtgattt 7349136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 60 - 150
Target Start/End: Complemental strand, 43253450 - 43253362
Alignment:
Q  60 taattgttccatatactttgttttggttgcttgattatcccttactcgacacatcaagtttgttattggtgtgatttttcaacgaattcgc 150  Q
    ||||||||||||| ||||||||||||||||||||||||| ||| ||| |||||||||  ||||||||||||||| |||||| |||||||||    
T  43253450 taattgttccatacactttgttttggttgcttgattatctcttgctccacacatcaa-attgttattggtgtga-ttttcatcgaattcgc 43253362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 26 - 138
Target Start/End: Original strand, 7188853 - 7188962
Alignment:
Q  26 tctctcgctgttttttacttttgggttgtgtttataattgttccatatactttgttttggttgcttgattatcccttactcgacacatcaagtttgttat 125  Q
    |||||||||||||| ||||||||  |||||||||||| |  |||||| ||||||||||||||||||||||||  ||| ||| ||||||||||| | ||||    
T  7188853 tctctcgctgttttctacttttgc-ttgtgtttataact--tccatacactttgttttggttgcttgattattacttgctccacacatcaagtattttat 7188949  T
Q  126 tggtgtgattttt 138  Q
    || ||||||||||    
T  7188950 tgatgtgattttt 7188962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 60 - 135
Target Start/End: Original strand, 40946685 - 40946759
Alignment:
Q  60 taattgttccatatactttgttttggttgcttgattatcccttactcgacacatcaagtttgttattggtgtgatt 135  Q
    |||||||| |||| ||||||||||||||||||||||||||||| ||| |||||||||| ||||||||| |||||||    
T  40946685 taattgtttcatacactttgttttggttgcttgattatcccttgctccacacatcaag-ttgttattgatgtgatt 40946759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 60 - 137
Target Start/End: Original strand, 2935624 - 2935700
Alignment:
Q  60 taattgttccatatactttgttttggttgcttgattatcccttactcgacacatcaagtttgttattggtgtgatttt 137  Q
    |||||||||||||  ||||||||||||||||| |||||||||| ||  |||||||||| |||||||||||||||||||    
T  2935624 taattgttccatacgctttgttttggttgcttaattatcccttgcttcacacatcaag-ttgttattggtgtgatttt 2935700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 6 - 140
Target Start/End: Original strand, 26295742 - 26295871
Alignment:
Q  6 ttgtgttctctcttcctttctctctcgctgttttttacttttgggttgtgtttataattgttccatatactttgttttggttgcttgattatcccttact 105  Q
    ||||||| |||||| |||||| ||  | |||||| ||||||||| |||||||||||||  || |||| ||||||||||| ||||||||||||| | | ||    
T  26295742 ttgtgttatctctttctttctttc--gttgttttctacttttggcttgtgtttataat--tttcatacactttgttttgattgcttgattatcacgtgct 26295837  T
Q  106 cgacacatcaagtttgttattggtgtgatttttca 140  Q
    | | ||||||||| | |||||||||||||||||||    
T  26295838 ccatacatcaagtat-ttattggtgtgatttttca 26295871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 36 - 155
Target Start/End: Original strand, 3878911 - 3879028
Alignment:
Q  36 ttttttacttttgggttgtgtttataattgttccatatacttt-gttttggttgcttgattatcccttactcgacacatcaagtttgttattggtgtgat 134  Q
    |||| ||||||||| |||| ||||  ||||||||||| | ||| |||||||||||||||||||| ||| ||| |||||||||| || |||||| ||||||    
T  3878911 ttttctacttttggtttgtattta--attgttccatacatttttgttttggttgcttgattatctcttgctccacacatcaag-ttattattgatgtgat 3879007  T
Q  135 ttttcaacgaattcgctacaa 155  Q
    || ||| ||||||||| ||||    
T  3879008 ttctcatcgaattcgcaacaa 3879028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 80 - 157
Target Start/End: Original strand, 40550204 - 40550280
Alignment:
Q  80 ttttggttgcttgattatcccttactcgacacatcaagtttgttattggtgtgatttttcaacgaattcgctacaatt 157  Q
    |||||||||||| |||||||||| ||| |||||||||| |||||||||||||||||||||  ||||||| | ||||||    
T  40550204 ttttggttgcttaattatcccttgctccacacatcaag-ttgttattggtgtgatttttcgtcgaattcacaacaatt 40550280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 80 - 138
Target Start/End: Complemental strand, 1046831 - 1046774
Alignment:
Q  80 ttttggttgcttgattatcccttactcgacacatcaagtttgttattggtgtgattttt 138  Q
    ||||||||||||||||||| ||| ||| |||||||||| ||||||||||||||||||||    
T  1046831 ttttggttgcttgattatctcttgctccacacatcaag-ttgttattggtgtgattttt 1046774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 80 - 157
Target Start/End: Complemental strand, 1049203 - 1049126
Alignment:
Q  80 ttttggttgcttgattatcccttactcgacacatcaagtttgttattggtgtg-atttttcaacgaattcgctacaatt 157  Q
    ||||||||||||||||||| ||| ||| |||||||||| |||||||||||||| |||||||  ||||||||| ||||||    
T  1049203 ttttggttgcttgattatctcttgctccacacatcaag-ttgttattggtgtgaatttttcttcgaattcgcaacaatt 1049126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 80 - 148
Target Start/End: Original strand, 22137454 - 22137521
Alignment:
Q  80 ttttggttgcttgattatcccttactcgacacatcaagtttgttattggtgtgatttttcaacgaattc 148  Q
    |||||||||||| |||||| ||| ||| |||||||||| |||||||||||||||||||||  |||||||    
T  22137454 ttttggttgcttaattatctcttgctccacacatcaag-ttgttattggtgtgatttttcgtcgaattc 22137521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 80 - 148
Target Start/End: Original strand, 40552481 - 40552548
Alignment:
Q  80 ttttggttgcttgattatcccttactcgacacatcaagtttgttattggtgtgatttttcaacgaattc 148  Q
    |||||||||||| |||||| ||| ||| |||||||||| |||||||||||||||||||||  |||||||    
T  40552481 ttttggttgcttaattatctcttgctccacacatcaag-ttgttattggtgtgatttttcgtcgaattc 40552548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 9 - 157
Target Start/End: Original strand, 6349097 - 6349239
Alignment:
Q  9 tgttctctcttcctttctctctcgctgttttttacttttgggttgtgtttataattgttccatatactttgttttggttgcttgattatcccttactcga 108  Q
    ||||||||||| |||||||||  ||| |||| ||||||||  |||||||||||| |  ||| || ||||||||||||||||||||||||  ||| ||| |    
T  6349097 tgttctctctttctttctctc--gctattttctacttttgc-ttgtgtttataact--tccgtacactttgttttggttgcttgattattacttgctcca 6349191  T
Q  109 cacatcaagtttgttattggtgtgatttttcaacgaattcgctacaatt 157  Q
     || |||||| | |||||||||||| |||| ||||| ||| | ||||||    
T  6349192 tacgtcaagtat-ttattggtgtgagttttgaacgatttcacaacaatt 6349239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 7 - 137
Target Start/End: Complemental strand, 24813490 - 24813364
Alignment:
Q  7 tgtgttctctcttcctttctctctcgctgttttttacttttgggttgtgtttataattgttccatatactttg-ttttggttgcttgattatcccttact 105  Q
    |||||||||||||||||| ||||||| |||||| ||||||| | || |||||||||||||| |    || ||| | ||||||||||||||||  ||| ||    
T  24813490 tgtgttctctcttccttt-tctctcgttgttttctactttt-gtttatgtttataattgttac---cacgttgatattggttgcttgattattacttgct 24813396  T
Q  106 cgacacatcaagtttgttattggtgtgatttt 137  Q
    | ||||||||||| | |||||| |||||||||    
T  24813395 ccacacatcaagtattttattgatgtgatttt 24813364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 85 - 137
Target Start/End: Complemental strand, 1502883 - 1502832
Alignment:
Q  85 gttgcttgattatcccttactcgacacatcaagtttgttattggtgtgatttt 137  Q
    |||||||||||||| ||| ||| |||||||||| |||||||||||||||||||    
T  1502883 gttgcttgattatctcttgctccacacatcaag-ttgttattggtgtgatttt 1502832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 103 - 155
Target Start/End: Complemental strand, 31153741 - 31153690
Alignment:
Q  103 actcgacacatcaagtttgttattggtgtgatttttcaacgaattcgctacaa 155  Q
    |||| |||||||||||| |||||||||||||||||||| ||||||||| ||||    
T  31153741 actccacacatcaagtt-gttattggtgtgatttttcatcgaattcgcaacaa 31153690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 80 - 138
Target Start/End: Complemental strand, 20137066 - 20137008
Alignment:
Q  80 ttttggttgcttgattatcccttactcgacacatcaagtttgttattggtgtgattttt 138  Q
    |||||||||||||| |||||||| ||| ||||||||| ||| ||||| || ||||||||    
T  20137066 ttttggttgcttgactatcccttgctccacacatcaaatttattattcgtatgattttt 20137008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 20137107 - 20137061
Alignment:
Q  1 ttcttttgtgttctctcttcctttctctctcgctgttttttacttttgg 49  Q
    ||||||||||||||||||||  || |||||||||||||| |||||||||    
T  20137107 ttcttttgtgttctctcttc--ttttctctcgctgttttctacttttgg 20137061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 108 - 147
Target Start/End: Original strand, 25357331 - 25357371
Alignment:
Q  108 acacatcaagtttgttattggtgtgatttt-tcaacgaatt 147  Q
    ||||||||||||||||||||||||| |||| ||||||||||    
T  25357331 acacatcaagtttgttattggtgtggttttctcaacgaatt 25357371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0045 (Bit Score: 80; Significance: 1e-37; HSPs: 1)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 150
Target Start/End: Original strand, 85521 - 85669
Alignment:
Q  1 ttcttttgtgttctctcttcctttctctctcgctgttttttacttttgggttgtgtttataattgttccatatactttg-ttttggttgcttgattatcc 99  Q
    |||||||||||||||||||| ||||||||  | |||||| ||||||||  |||||||||||||||||||||| |||||| ||||||||| |||||||||     
T  85521 ttcttttgtgttctctcttcttttctctc--gttgttttctacttttgacttgtgtttataattgttccatacactttgattttggttgtttgattatct 85618  T
Q  100 cttactcgacacatcaagtttgttattggtgtgatttttcaacgaattcgc 150  Q
    ||| ||| |||||| ||| |||||||||||||||||||||| |||||||||    
T  85619 cttgctccacacattaagattgttattggtgtgatttttcatcgaattcgc 85669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 77; Significance: 7e-36; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 4 - 150
Target Start/End: Original strand, 35887 - 36035
Alignment:
Q  4 ttttgtgttctctcttcctttctctctc-gctgttttttacttttgggttgtgtttataattgttccatatactttgtttt-ggttgcttgattatccct 101  Q
    ||||||||||||||||| |||||||| | | ||||||  | |||||| ||||||||||||||||| |||| |||||||||| |||||||||| |||||||    
T  35887 ttttgtgttctctcttcttttctctcgctgttgttttcgagttttggcttgtgtttataattgtttcatacactttgtttttggttgcttgactatccct 35986  T
Q  102 tactcgacacatcaagtttgttattggtgtgatttttcaacgaattcgc 150  Q
    | ||| |||||||||||||||||||||||| |||||||| |||||||||    
T  35987 tgctccacacatcaagtttgttattggtgtaatttttcatcgaattcgc 36035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 73; Significance: 2e-33; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 4 - 150
Target Start/End: Original strand, 79478 - 79627
Alignment:
Q  4 ttttgtgttctctcttcctttctctctcgctgtttttt---acttttgggttgtgtttataattgttccatatactttg-ttttggttgcttgattatcc 99  Q
    ||||||||||||||||| ||| ||||| |||||| |||   |||||||| ||||| |||||||||||||||| |||||| |||||||||| | |||||||    
T  79478 ttttgtgttctctcttctttt-tctcttgctgttgttttctacttttggcttgtgattataattgttccatacactttgattttggttgcctaattatcc 79576  T
Q  100 cttactcgacacatcaagtttgttattggtgtgatttttcaacgaattcgc 150  Q
    ||| ||| |||||||||||||||||||||||||||||||||  ||||||||    
T  79577 cttgctccacacatcaagtttgttattggtgtgatttttcattgaattcgc 79627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0339 (Bit Score: 71; Significance: 3e-32; HSPs: 1)
Name: scaffold0339
Description:

Target: scaffold0339; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 26 - 148
Target Start/End: Original strand, 4309 - 4431
Alignment:
Q  26 tctctcgctgttttttacttttgggttgtgtttataattgttccatatactttgttttggttgcttgattatcccttactcgacacatcaagtttgttat 125  Q
    |||||||||||||| ||||||||| |||||||||||||| ||| ||| ||||  ||||| ||||||||||||||||||||| ||||||||||||||||||    
T  4309 tctctcgctgttttctacttttggcttgtgtttataattattctatacacttcattttgattgcttgattatcccttactccacacatcaagtttgttat 4408  T
Q  126 tggtgtgatttttcaacgaattc 148  Q
    || |||| |||  ||||||||||    
T  4409 tgatgtgttttcacaacgaattc 4431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 71; Significance: 3e-32; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 1 - 157
Target Start/End: Original strand, 80149 - 80308
Alignment:
Q  1 ttcttttgtgttctctcttcctttctctctcgctgtttttt---acttttgggttgtgtttataattgttccatatactttg-ttttggttgcttgatta 96  Q
    |||||||||| ||||||||||||| |||||||||||| |||   |||||||| |||||||||||||| ||||||| |||||| |||| ||||| ||||||    
T  80149 ttcttttgtgatctctcttccttt-tctctcgctgttgttttctacttttggcttgtgtttataatttttccatacactttgattttcgttgcctgatta 80247  T
Q  97 tcccttactcgacacatcaagtttgttattggtgtgatttttcaacgaattcgctacaatt 157  Q
    |  ||| ||| ||||||||||||||||||||||||| ||| ||| ||||||||| ||||||    
T  80248 ttacttgctccacacatcaagtttgttattggtgtgttttctcatcgaattcgcaacaatt 80308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0154 (Bit Score: 63; Significance: 2e-27; HSPs: 1)
Name: scaffold0154
Description:

Target: scaffold0154; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 150
Target Start/End: Complemental strand, 11471 - 11318
Alignment:
Q  1 ttcttttgtgttctctcttcctttctctctcgctgtttttt---acttttgggttgtgtttataattgttccatatactt--tgttttggttgcttgatt 95  Q
    |||||||||||||||||||| ||| |||||||||||| |||   |||||||| ||||| |||||||||||||||| ||||  | |||| ||||||| |||    
T  11471 ttcttttgtgttctctcttctttt-tctctcgctgttgttttctacttttggcttgtgattataattgttccatacactttattttttcgttgcttaatt 11373  T
Q  96 atcccttactcgacacatcaagtttgttattggtgtgat-ttttcaacgaattcgc 150  Q
    || |||||||| |||||||||| |||||||||||||||| |||||| |||||||||    
T  11372 attccttactccacacatcaag-ttgttattggtgtgatattttcatcgaattcgc 11318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1674 (Bit Score: 60; Significance: 1e-25; HSPs: 1)
Name: scaffold1674
Description:

Target: scaffold1674; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 34 - 148
Target Start/End: Complemental strand, 1409 - 1298
Alignment:
Q  34 tgttttttacttttgggttgtgtttataattgttccatatactttgttttggttgcttgattatcccttactcgacacatcaagtttgttattggtgtga 133  Q
    |||||| ||||||||| |||| ||||  ||||||||||| |||||||||||||||||||||||||  || ||| |||||||||| |||||||||||||||    
T  1409 tgttttctacttttggcttgtattta--attgttccatacactttgttttggttgcttgattatctttttctccacacatcaag-ttgttattggtgtga 1313  T
Q  134 tttttcaacgaattc 148  Q
    ||||||| |||||||    
T  1312 tttttcatcgaattc 1298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025 (Bit Score: 57; Significance: 6e-24; HSPs: 1)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 34 - 137
Target Start/End: Complemental strand, 69250 - 69149
Alignment:
Q  34 tgttttttacttttgggttgtgtttataattgttccatatactttgttttggttgcttgattatcccttactcgacacatcaagtttgttattggtgtga 133  Q
    |||||| ||||||||| |||| ||||||| |  |||||| | |||||||||||||| |||||||||||| ||| ||||||||||||||||||||||||||    
T  69250 tgttttctacttttggcttgtatttataact--tccatacattttgttttggttgcctgattatcccttgctccacacatcaagtttgttattggtgtga 69153  T
Q  134 tttt 137  Q
    ||||    
T  69152 tttt 69149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0267 (Bit Score: 55; Significance: 1e-22; HSPs: 1)
Name: scaffold0267
Description:

Target: scaffold0267; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 36 - 148
Target Start/End: Original strand, 357 - 467
Alignment:
Q  36 ttttttacttttgggttgtgtttataattgttccatatactttg-ttttggttgcttgattatcccttactcgacacatcaagtttgttattggtgtgat 134  Q
    |||| ||||||||| |||| ||||  |||||||||||  ||||| ||||||||||||||||||||||| ||| |||||||||| ||||||||||||||||    
T  357 ttttctacttttggcttgtattta--attgttccatacgctttgattttggttgcttgattatcccttgctccacacatcaag-ttgttattggtgtgat 453  T
Q  135 ttttcaacgaattc 148  Q
    || |||||||||||    
T  454 ttctcaacgaattc 467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0068 (Bit Score: 55; Significance: 1e-22; HSPs: 1)
Name: scaffold0068
Description:

Target: scaffold0068; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 60 - 150
Target Start/End: Original strand, 29524 - 29612
Alignment:
Q  60 taattgttccatatactttgttttggttgcttgattatcccttactcgacacatcaagtttgttattggtgtgatttttcaacgaattcgc 150  Q
    ||||||||||||| ||||||||||| ||||||||||||||||| ||| |||||||||| ||||||||||||||| |||||| |||||||||    
T  29524 taattgttccatacactttgttttgattgcttgattatcccttgctccacacatcaag-ttgttattggtgtga-ttttcatcgaattcgc 29612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0127 (Bit Score: 54; Significance: 4e-22; HSPs: 1)
Name: scaffold0127
Description:

Target: scaffold0127; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 41 - 157
Target Start/End: Complemental strand, 12825 - 12712
Alignment:
Q  41 tacttttgggttgtgtttataattgttccatatactttgttttggttgcttgattatcccttactcgacacatcaagtttgttattggtgtgatttttca 140  Q
    ||||||||| |||| ||||||| | |  |||| ||||||||||||||||||||||||||||| ||| |||||||||| ||||||||||||| ||||||||    
T  12825 tacttttggcttgtatttataacttt--catacactttgttttggttgcttgattatcccttgctccacacatcaag-ttgttattggtgtcatttttca 12729  T
Q  141 acgaattcgctacaatt 157  Q
     ||||||| | ||||||    
T  12728 tcgaattcacaacaatt 12712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0038 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold0038
Description:

Target: scaffold0038; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 34 - 137
Target Start/End: Complemental strand, 41441 - 41341
Alignment:
Q  34 tgttttttacttttgggttgtgtttataattgttccatatactttgttttggttgcttgattatcccttactcgacacatcaagtttgttattggtgtga 133  Q
    |||||| ||||||||| |||| ||||  ||||||||||| ||||||||||| ||||||||||||| ||| ||| |||||||||| |||||||||||||||    
T  41441 tgttttctacttttggcttgtattta--attgttccatacactttgttttgattgcttgattatctcttgctccacacatcaag-ttgttattggtgtga 41345  T
Q  134 tttt 137  Q
    ||||    
T  41344 tttt 41341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0370 (Bit Score: 52; Significance: 6e-21; HSPs: 1)
Name: scaffold0370
Description:

Target: scaffold0370; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 36 - 138
Target Start/End: Complemental strand, 1408 - 1309
Alignment:
Q  36 ttttttacttttgggttgtgtttataattgttccatatactttgttttggttgcttgattatcccttactcgacacatcaagtttgttattggtgtgatt 135  Q
    |||| ||||||||| |||| ||||  |||||| |||| ||||||||||||||||||||||||| ||| ||| |||||||||| |||||||||||||||||    
T  1408 ttttctacttttggcttgtattta--attgttacatacactttgttttggttgcttgattatctcttgctccacacatcaag-ttgttattggtgtgatt 1312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0472 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold0472
Description:

Target: scaffold0472; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 34 - 148
Target Start/End: Original strand, 6529 - 6640
Alignment:
Q  34 tgttttttacttttgggttgtgtttataattgttccatatactttg-ttttggttgcttgattatcccttactcgacacatcaagtttgttattggtgtg 132  Q
    |||||| ||||||||| |||| ||||| |||   |||||  ||||| |||||||||||| |||||||||| ||| |||||||||| ||||||||||||||    
T  6529 tgttttctacttttggcttgtatttattatt---ccatacgctttgattttggttgcttaattatcccttgctccacacatcaag-ttgttattggtgtg 6624  T
Q  133 atttttcaacgaattc 148  Q
    |||||||| |||||||    
T  6625 atttttcatcgaattc 6640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0891 (Bit Score: 45; Significance: 9e-17; HSPs: 1)
Name: scaffold0891
Description:

Target: scaffold0891; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 34 - 137
Target Start/End: Complemental strand, 4635 - 4535
Alignment:
Q  34 tgttttttacttttgggttgtgtttataattgttccatatactttgttttggttgcttgattatcccttactcgacacatcaagtttgttattggtgtga 133  Q
    |||||| ||||||||| |||| ||||  |||||||||||  |||||  || |||||||||||||||||||||| |||||||||  |||||||||||||||    
T  4635 tgttttctacttttggcttgtattta--attgttccatacgctttgactttgttgcttgattatcccttactccacacatcaa-attgttattggtgtga 4539  T
Q  134 tttt 137  Q
    ||||    
T  4538 tttt 4535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0468 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0468
Description:

Target: scaffold0468; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 7 - 137
Target Start/End: Complemental strand, 1634 - 1509
Alignment:
Q  7 tgtgttctctcttcctttctctctcgctgttttttacttttgggttgtgtttataattgttccatatactttgttttggttgcttgattatcccttactc 106  Q
    ||||||||||||| |||| ||||||  |||||| ||||||||| ||||||||||||   ||||||| |||||| |||||||||||||||||  ||| |||    
T  1634 tgtgttctctctttcttt-tctctcattgttttctacttttggcttgtgtttataa--cttccatacactttg-tttggttgcttgattattacttgctc 1539  T
Q  107 gacacatcaagtttgttattggtgtgatttt 137  Q
     ||||||||| | | ||||||||||||||||    
T  1538 cacacatcaaatat-ttattggtgtgatttt 1509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0140 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 2)
Name: scaffold0140
Description:

Target: scaffold0140; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 80 - 157
Target Start/End: Original strand, 22491 - 22567
Alignment:
Q  80 ttttggttgcttgattatcccttactcgacacatcaagtttgttattggtgtgatttttcaacgaattcgctacaatt 157  Q
    |||||||||||| |||||||||| ||| |||||||||| |||||||||||||||||||||  ||||||| | ||||||    
T  22491 ttttggttgcttaattatcccttgctccacacatcaag-ttgttattggtgtgatttttcgtcgaattcacaacaatt 22567  T

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Target: scaffold0140; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 80 - 148
Target Start/End: Original strand, 24766 - 24833
Alignment:
Q  80 ttttggttgcttgattatcccttactcgacacatcaagtttgttattggtgtgatttttcaacgaattc 148  Q
    |||||||||||| |||||||||| ||| |||||||||| |||||||||||||||||||||  |||||||    
T  24766 ttttggttgcttaattatcccttgctccacacatcaag-ttgttattggtgtgatttttcgtcgaattc 24833  T

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Target: scaffold0250 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0250
Description:

Target: scaffold0250; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 81 - 137
Target Start/End: Original strand, 3254 - 3309
Alignment:
Q  81 tttggttgcttgattatcccttactcgacacatcaagtttgttattggtgtgatttt 137  Q
    |||||||||||||||||||||| ||| |||||||||| |||||||||||||||||||    
T  3254 tttggttgcttgattatcccttgctccacacatcaag-ttgttattggtgtgatttt 3309  T

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Target: scaffold1899 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold1899
Description:

Target: scaffold1899; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 92 - 145
Target Start/End: Original strand, 1 - 53
Alignment:
Q  92 gattatcccttactcgacacatcaagtttgttattggtgtgatttttcaacgaa 145  Q
    ||||||| ||| ||| |||||||||||| |||||||||||||||||||| ||||    
T  1 gattatctcttgctccacacatcaagtt-gttattggtgtgatttttcatcgaa 53  T

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Target: scaffold0133 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0133
Description:

Target: scaffold0133; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 6 - 140
Target Start/End: Original strand, 5104 - 5233
Alignment:
Q  6 ttgtgttctctcttcctttctctctcgctgttttttacttttgggttgtgtttataattgttccatatactttgttttggttgcttgattatcccttact 105  Q
    |||||||||||||| ||| |||||  ||||||||| |||||||| ||| ||||||||    |||||| |||||  ||| |||||||||||||  |||  |    
T  5104 ttgtgttctctctttcttcctctc--gctgttttt-acttttggcttgcgtttataacg--tccatacacttttattttgttgcttgattattacttgtt 5198  T
Q  106 cgacacatcaagtttgttattggtgtgatttttca 140  Q
     || ||||||||| | ||| |||||||||||||||    
T  5199 tgatacatcaagtattttaatggtgtgatttttca 5233  T

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