View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF3301_low_1 (Length: 811)

Name: NF3301_low_1
Description: NF3301
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF3301_low_1
NF3301_low_1
[»] chr4 (21 HSPs)
chr4 (374-624)||(999461-999711)
chr4 (198-323)||(999290-999415)
chr4 (17-133)||(999109-999225)
chr4 (741-792)||(999793-999844)
chr4 (261-307)||(40742599-40742645)
chr4 (262-316)||(40613449-40613503)
chr4 (262-307)||(5775364-5775409)
chr4 (265-318)||(22440609-22440662)
chr4 (263-312)||(44081584-44081633)
chr4 (263-315)||(3712516-3712568)
chr4 (261-305)||(13134460-13134504)
chr4 (262-310)||(33950141-33950189)
chr4 (264-308)||(36635331-36635375)
chr4 (269-316)||(8423731-8423778)
chr4 (268-307)||(21539879-21539918)
chr4 (268-315)||(37698712-37698759)
chr4 (270-309)||(56257939-56257978)
chr4 (262-308)||(7214528-7214574)
chr4 (266-307)||(903930-903971)
chr4 (269-306)||(6273953-6273990)
chr4 (263-300)||(10499277-10499314)
[»] chr5 (27 HSPs)
chr5 (263-316)||(12927653-12927706)
chr5 (263-316)||(27144462-27144515)
chr5 (262-309)||(23012414-23012461)
chr5 (262-310)||(36838548-36838596)
chr5 (262-309)||(16203801-16203848)
chr5 (262-316)||(3966502-3966556)
chr5 (262-316)||(11685938-11685992)
chr5 (265-307)||(33035810-33035852)
chr5 (264-309)||(6471897-6471942)
chr5 (261-310)||(34879355-34879404)
chr5 (267-308)||(35017044-35017085)
chr5 (264-309)||(39205886-39205931)
chr5 (262-310)||(30502394-30502442)
chr5 (262-310)||(30542737-30542785)
chr5 (261-309)||(41091262-41091310)
chr5 (262-305)||(14873527-14873570)
chr5 (262-317)||(23220981-23221036)
chr5 (266-309)||(31682040-31682082)
chr5 (262-316)||(6035482-6035535)
chr5 (268-318)||(10022629-10022679)
chr5 (262-304)||(15086482-15086524)
chr5 (272-318)||(19438340-19438386)
chr5 (261-315)||(23015994-23016048)
chr5 (262-316)||(28588680-28588734)
chr5 (262-307)||(25863212-25863257)
chr5 (264-309)||(28473939-28473984)
chr5 (262-307)||(43554529-43554574)
[»] chr2 (19 HSPs)
chr2 (262-307)||(30527601-30527646)
chr2 (264-316)||(21616761-21616813)
chr2 (262-310)||(34691811-34691859)
chr2 (262-310)||(34714223-34714271)
chr2 (261-316)||(37411249-37411304)
chr2 (262-308)||(5367199-5367245)
chr2 (262-316)||(23718025-23718079)
chr2 (262-316)||(24105697-24105751)
chr2 (262-315)||(44860320-44860373)
chr2 (267-310)||(2423874-2423917)
chr2 (265-308)||(2665897-2665940)
chr2 (262-309)||(20539680-20539727)
chr2 (262-316)||(18276520-18276574)
chr2 (262-316)||(24975331-24975385)
chr2 (266-316)||(28677908-28677958)
chr2 (261-307)||(36281693-36281739)
chr2 (262-307)||(23354658-23354703)
chr2 (263-316)||(31808076-31808129)
chr2 (262-307)||(39279683-39279728)
[»] chr8 (19 HSPs)
chr8 (261-317)||(34897083-34897139)
chr8 (265-316)||(39954288-39954339)
chr8 (264-309)||(14731718-14731763)
chr8 (262-309)||(12606835-12606882)
chr8 (262-309)||(13844602-13844649)
chr8 (263-310)||(20785472-20785519)
chr8 (263-316)||(24362209-24362262)
chr8 (262-307)||(33405390-33405435)
chr8 (262-314)||(34222948-34223000)
chr8 (262-309)||(31236583-31236630)
chr8 (263-309)||(3025557-3025603)
chr8 (266-316)||(4611533-4611583)
chr8 (262-316)||(8342971-8343025)
chr8 (262-308)||(14134706-14134752)
chr8 (262-308)||(15816135-15816181)
chr8 (262-307)||(4786344-4786389)
chr8 (271-316)||(8343315-8343360)
chr8 (262-307)||(11927092-11927137)
chr8 (262-307)||(39820437-39820482)
[»] chr6 (31 HSPs)
chr6 (262-310)||(24832593-24832641)
chr6 (262-309)||(7086801-7086848)
chr6 (263-316)||(19040351-19040404)
chr6 (262-310)||(7265599-7265647)
chr6 (262-309)||(7938122-7938169)
chr6 (262-309)||(7996384-7996431)
chr6 (262-309)||(8022370-8022417)
chr6 (262-309)||(9025500-9025547)
chr6 (261-316)||(10842531-10842586)
chr6 (262-316)||(5732516-5732570)
chr6 (262-308)||(9195760-9195806)
chr6 (262-310)||(6665218-6665266)
chr6 (261-317)||(13851734-13851790)
chr6 (261-309)||(26562695-26562743)
chr6 (262-310)||(30866150-30866198)
chr6 (262-314)||(34073353-34073405)
chr6 (270-309)||(8805586-8805625)
chr6 (264-315)||(10888982-10889033)
chr6 (260-303)||(11591874-11591917)
chr6 (262-305)||(13364711-13364754)
chr6 (262-309)||(21924941-21924988)
chr6 (262-316)||(7377978-7378032)
chr6 (262-316)||(9027177-9027231)
chr6 (262-316)||(9629382-9629436)
chr6 (262-316)||(9658878-9658932)
chr6 (261-307)||(21142126-21142172)
chr6 (262-308)||(26178687-26178733)
chr6 (262-307)||(6389751-6389796)
chr6 (262-307)||(9617442-9617487)
chr6 (262-307)||(17168469-17168514)
chr6 (263-308)||(17302354-17302399)
[»] chr3 (17 HSPs)
chr3 (263-310)||(49505161-49505208)
chr3 (262-316)||(8383256-8383310)
chr3 (264-309)||(11313808-11313853)
chr3 (263-316)||(32804547-32804600)
chr3 (262-310)||(8039841-8039889)
chr3 (261-308)||(29508451-29508498)
chr3 (262-316)||(7928449-7928503)
chr3 (262-316)||(11665943-11665997)
chr3 (270-309)||(27277852-27277891)
chr3 (266-316)||(1438803-1438853)
chr3 (262-308)||(17005625-17005671)
chr3 (264-309)||(10455796-10455841)
chr3 (262-315)||(10690268-10690321)
chr3 (270-315)||(11251978-11252023)
chr3 (261-314)||(11658816-11658869)
chr3 (262-315)||(34307786-34307839)
chr3 (263-316)||(48202276-48202329)
[»] chr1 (32 HSPs)
chr1 (262-316)||(38503319-38503373)
chr1 (263-315)||(7918218-7918270)
chr1 (264-318)||(11605943-11605997)
chr1 (266-308)||(14332652-14332694)
chr1 (263-309)||(34712390-34712436)
chr1 (262-316)||(36878460-36878514)
chr1 (262-316)||(39953152-39953206)
chr1 (262-307)||(1864886-1864931)
chr1 (262-307)||(39130773-39130818)
chr1 (262-318)||(9629906-9629962)
chr1 (264-316)||(25098563-25098615)
chr1 (264-308)||(35999330-35999374)
chr1 (262-310)||(44482235-44482283)
chr1 (262-309)||(38075976-38076023)
chr1 (266-309)||(40181877-40181920)
chr1 (262-309)||(46348389-46348436)
chr1 (264-310)||(6427355-6427401)
chr1 (266-308)||(12707883-12707925)
chr1 (266-308)||(12713337-12713379)
chr1 (266-308)||(12717428-12717470)
chr1 (262-316)||(17831537-17831591)
chr1 (262-316)||(21530688-21530742)
chr1 (263-305)||(25361896-25361938)
chr1 (262-316)||(41877476-41877530)
chr1 (263-316)||(398772-398825)
chr1 (263-308)||(10233260-10233305)
chr1 (264-309)||(13436464-13436509)
chr1 (268-309)||(16927197-16927238)
chr1 (262-303)||(25272494-25272535)
chr1 (263-316)||(32724105-32724158)
chr1 (262-315)||(34371714-34371766)
chr1 (262-307)||(52903257-52903302)
[»] chr7 (29 HSPs)
chr7 (262-309)||(3721099-3721146)
chr7 (262-309)||(7328697-7328744)
chr7 (262-316)||(9482933-9482987)
chr7 (262-316)||(20549790-20549844)
chr7 (262-316)||(27093419-27093473)
chr7 (262-316)||(27184828-27184882)
chr7 (268-317)||(5235984-5236033)
chr7 (263-316)||(5548675-5548728)
chr7 (262-307)||(15902830-15902875)
chr7 (263-316)||(32308119-32308172)
chr7 (264-316)||(33384590-33384642)
chr7 (262-309)||(3142084-3142131)
chr7 (264-307)||(5233637-5233680)
chr7 (264-315)||(8160416-8160467)
chr7 (263-310)||(17851436-17851483)
chr7 (262-316)||(1433453-1433507)
chr7 (263-317)||(2034439-2034493)
chr7 (262-316)||(2948682-2948736)
chr7 (265-307)||(16341504-16341546)
chr7 (262-316)||(19206049-19206103)
chr7 (262-316)||(26329388-26329442)
chr7 (270-316)||(29787383-29787429)
chr7 (262-307)||(3520348-3520393)
chr7 (262-307)||(8239056-8239101)
chr7 (271-308)||(11831439-11831476)
chr7 (262-315)||(21880152-21880205)
chr7 (263-308)||(22868049-22868094)
chr7 (262-307)||(23128667-23128712)
chr7 (262-307)||(29812670-29812715)
[»] scaffold0022 (1 HSPs)
scaffold0022 (261-307)||(90851-90897)
[»] scaffold0123 (1 HSPs)
scaffold0123 (262-315)||(44531-44584)
[»] scaffold0024 (1 HSPs)
scaffold0024 (263-307)||(68249-68293)
[»] scaffold0020 (1 HSPs)
scaffold0020 (262-309)||(135318-135365)
[»] scaffold0697 (1 HSPs)
scaffold0697 (262-316)||(1643-1697)
[»] scaffold0036 (1 HSPs)
scaffold0036 (262-308)||(9753-9799)
[»] scaffold0236 (1 HSPs)
scaffold0236 (262-307)||(25774-25819)


Alignment Details
Target: chr4 (Bit Score: 247; Significance: 1e-137; HSPs: 21)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 247; E-Value: 1e-137
Query Start/End: Original strand, 374 - 624
Target Start/End: Original strand, 999461 - 999711
Alignment:
Q  374 ctttatgatcacaaggaaaccttgaaataatcattttgatcaaacatgtctctttttaggtttgaacaacctgtgttcttataaaccatttttgttcata 473  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  999461 ctttatgatcacaaggaaaccttgaaataatcattttgatcaaacatgtctctttttaggtttgaacaacctgtgttcttataaaccatttttgttcata 999560  T
Q  474 aaatgataatgaaaatgatttaaaacacaattcgtagaataatttctttatagtgatttgcaacaatccaattcccaggtctaaattaatagagacaaaa 573  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  999561 aaatgataatgaaaatgatttaaaacacaattcttagaataatttctttatagtgatttgcaacaatccaattcccaggtctaaattaatagagacaaaa 999660  T
Q  574 tcatcttcagggttgttcatatccaacaatggaaaataatatatattgttt 624  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  999661 tcatcttcagggttgttcatatccaacaatggaaaataatatatattgttt 999711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 122; E-Value: 4e-62
Query Start/End: Original strand, 198 - 323
Target Start/End: Original strand, 999290 - 999415
Alignment:
Q  198 gcaacctgatgaattatatcctatgaatgaacctcggacactcttcggattaggcgcgacgtgtcgacacatataattacactaaattatatgatttact 297  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  999290 gcaacctgatgaattatatcctatgaatgaacctcggacactcttcggattaggcgcgacatgtcgacacatataattacactaaattatatgatttact 999389  T
Q  298 caaattattagcgatgtcgatctatg 323  Q
    ||||||||||||||||||||||||||    
T  999390 caaattattagcgatgtcgatctatg 999415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 117; E-Value: 4e-59
Query Start/End: Original strand, 17 - 133
Target Start/End: Original strand, 999109 - 999225
Alignment:
Q  17 taacatagagatctaccagaaatactagatatgtctagcaatttcctgtcatatgaaattcatacaatgcataagctctagtagaatatgaaattcaaac 116  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  999109 taacatagagatctaccagaaatactagatatgtctagcaatttcctgtcatatgaaattcatacaatgcataagctctagtagaatatgaaattcaaac 999208  T
Q  117 aattataatgtagaatg 133  Q
    |||||||||||||||||    
T  999209 aattataatgtagaatg 999225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 741 - 792
Target Start/End: Original strand, 999793 - 999844
Alignment:
Q  741 cttactgtgagaatgtttgaaggcattgatgatacagaaatatggtacattg 792  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  999793 cttactgtgagaatgtttgaaggcattgatgatacaaaaatatggtacattg 999844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 261 - 307
Target Start/End: Complemental strand, 40742645 - 40742599
Alignment:
Q  261 tcgacacatataattacactaaattatatgatttactcaaattatta 307  Q
    ||||||||||||||||||||| |||||||||||| ||||||||||||    
T  40742645 tcgacacatataattacactagattatatgattttctcaaattatta 40742599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 262 - 316
Target Start/End: Complemental strand, 40613503 - 40613449
Alignment:
Q  262 cgacacatataattacactaaattatatgatttactcaaattattagcgatgtcg 316  Q
    ||||||||||||||||||| |||||| |||||| |||||| |||||||| |||||    
T  40613503 cgacacatataattacactgaattatgtgattttctcaaaatattagcggtgtcg 40613449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 262 - 307
Target Start/End: Original strand, 5775364 - 5775409
Alignment:
Q  262 cgacacatataattacactaaattatatgatttactcaaattatta 307  Q
    ||||||||||||||||||| |||||| |||||| ||||||||||||    
T  5775364 cgacacatataattacacttaattatgtgattttctcaaattatta 5775409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 265 - 318
Target Start/End: Original strand, 22440609 - 22440662
Alignment:
Q  265 cacatataattacactaaattatatgatttactcaaattattagcgatgtcgat 318  Q
    |||||||||||||||| |||||| |||||| |||||||||||| || |||||||    
T  22440609 cacatataattacactgaattatgtgattttctcaaattattaacggtgtcgat 22440662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 263 - 312
Target Start/End: Original strand, 44081584 - 44081633
Alignment:
Q  263 gacacatataattacactaaattatatgatttactcaaattattagcgat 312  Q
    |||||||||||||||| |||||||||||||||  ||||||||||| ||||    
T  44081584 gacacatataattacattaaattatatgattttttcaaattattaacgat 44081633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 263 - 315
Target Start/End: Original strand, 3712516 - 3712568
Alignment:
Q  263 gacacatataattacactaaattatatgatttactcaaattattagcgatgtc 315  Q
    |||||||||||||||| | ||||| ||||||| ||||||||||||||| ||||    
T  3712516 gacacatataattacattgaattacatgattttctcaaattattagcggtgtc 3712568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 261 - 305
Target Start/End: Complemental strand, 13134504 - 13134460
Alignment:
Q  261 tcgacacatataattacactaaattatatgatttactcaaattat 305  Q
    ||||||||||||||||||||||||||| |||||| || |||||||    
T  13134504 tcgacacatataattacactaaattatgtgattttcttaaattat 13134460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 262 - 310
Target Start/End: Complemental strand, 33950189 - 33950141
Alignment:
Q  262 cgacacatataattacactaaattatatgatttactcaaattattagcg 310  Q
    |||||||||| |||||| |||||||| |||||| |||||||||||||||    
T  33950189 cgacacatatgattacattaaattatgtgattttctcaaattattagcg 33950141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 264 - 308
Target Start/End: Complemental strand, 36635375 - 36635331
Alignment:
Q  264 acacatataattacactaaattatatgatttactcaaattattag 308  Q
    ||||||||||||||||| |||||| |||||| |||||||||||||    
T  36635375 acacatataattacactgaattatgtgattttctcaaattattag 36635331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 269 - 316
Target Start/End: Original strand, 8423731 - 8423778
Alignment:
Q  269 tataattacactaaattatatgatttactcaaattattagcgatgtcg 316  Q
    |||||||||||| |||||| |||||| ||||||||||||||| |||||    
T  8423731 tataattacactgaattatgtgattttctcaaattattagcggtgtcg 8423778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 268 - 307
Target Start/End: Original strand, 21539879 - 21539918
Alignment:
Q  268 atataattacactaaattatatgatttactcaaattatta 307  Q
    ||||||||||||||||||||||||||| || |||||||||    
T  21539879 atataattacactaaattatatgattttcttaaattatta 21539918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 268 - 315
Target Start/End: Complemental strand, 37698759 - 37698712
Alignment:
Q  268 atataattacactaaattatatgatttactcaaattattagcgatgtc 315  Q
    ||||||||||||| |||||||| |||| ||||||||||||| ||||||    
T  37698759 atataattacactgaattatataattttctcaaattattagagatgtc 37698712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 270 - 309
Target Start/End: Complemental strand, 56257978 - 56257939
Alignment:
Q  270 ataattacactaaattatatgatttactcaaattattagc 309  Q
    ||||||||||| ||||||||||||| ||||||||||||||    
T  56257978 ataattacactgaattatatgattttctcaaattattagc 56257939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 262 - 308
Target Start/End: Original strand, 7214528 - 7214574
Alignment:
Q  262 cgacacatataattacactaaattatatgatttactcaaattattag 308  Q
    |||| |||||||||||| |||||||| |||||| |||||||||||||    
T  7214528 cgacgcatataattacattaaattatgtgattttctcaaattattag 7214574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 266 - 307
Target Start/End: Complemental strand, 903971 - 903930
Alignment:
Q  266 acatataattacactaaattatatgatttactcaaattatta 307  Q
    ||||||||||||||| |||||| |||||| ||||||||||||    
T  903971 acatataattacactgaattatgtgattttctcaaattatta 903930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 269 - 306
Target Start/End: Complemental strand, 6273990 - 6273953
Alignment:
Q  269 tataattacactaaattatatgatttactcaaattatt 306  Q
    ||||||||||||||||||||| |||| |||||||||||    
T  6273990 tataattacactaaattatatcattttctcaaattatt 6273953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 263 - 300
Target Start/End: Original strand, 10499277 - 10499314
Alignment:
Q  263 gacacatataattacactaaattatatgatttactcaa 300  Q
    ||||||||||||||||||||||||| |||||| |||||    
T  10499277 gacacatataattacactaaattatgtgattttctcaa 10499314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 46; Significance: 8e-17; HSPs: 27)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 263 - 316
Target Start/End: Complemental strand, 12927706 - 12927653
Alignment:
Q  263 gacacatataattacactaaattatatgatttactcaaattattagcgatgtcg 316  Q
    |||| ||||||||||||||||||||||||||| |||||||||||||||||||||    
T  12927706 gacatatataattacactaaattatatgattttctcaaattattagcgatgtcg 12927653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 263 - 316
Target Start/End: Complemental strand, 27144515 - 27144462
Alignment:
Q  263 gacacatataattacactaaattatatgatttactcaaattattagcgatgtcg 316  Q
    ||||||||||||||||||||||||| |||||| ||||||||||||||| |||||    
T  27144515 gacacatataattacactaaattatgtgatttcctcaaattattagcggtgtcg 27144462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 262 - 309
Target Start/End: Original strand, 23012414 - 23012461
Alignment:
Q  262 cgacacatataattacactaaattatatgatttactcaaattattagc 309  Q
    ||||||||||||||||| ||||||||||||||| ||||||||||||||    
T  23012414 cgacacatataattacattaaattatatgattttctcaaattattagc 23012461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 262 - 310
Target Start/End: Complemental strand, 36838596 - 36838548
Alignment:
Q  262 cgacacatataattacactaaattatatgatttactcaaattattagcg 310  Q
    |||||||||||||||||||||||||| | |||| |||||||||||||||    
T  36838596 cgacacatataattacactaaattatgtaattttctcaaattattagcg 36838548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 262 - 309
Target Start/End: Original strand, 16203801 - 16203848
Alignment:
Q  262 cgacacatataattacactaaattatatgatttactcaaattattagc 309  Q
    ||||||||||||||||||||||||||  ||||| ||||||||||||||    
T  16203801 cgacacatataattacactaaattatgagattttctcaaattattagc 16203848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 262 - 316
Target Start/End: Complemental strand, 3966556 - 3966502
Alignment:
Q  262 cgacacatataattacactaaattatatgatttactcaaattattagcgatgtcg 316  Q
    ||||||||||||||||||| |||| | |||||| ||||||||||||||| |||||    
T  3966556 cgacacatataattacactgaattgtgtgattttctcaaattattagcggtgtcg 3966502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 262 - 316
Target Start/End: Complemental strand, 11685992 - 11685938
Alignment:
Q  262 cgacacatataattacactaaattatatgatttactcaaattattagcgatgtcg 316  Q
    ||||||||||||||||||||||||||  || || ||||||||||||||| |||||    
T  11685992 cgacacatataattacactaaattatgcgactttctcaaattattagcggtgtcg 11685938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 265 - 307
Target Start/End: Original strand, 33035810 - 33035852
Alignment:
Q  265 cacatataattacactaaattatatgatttactcaaattatta 307  Q
    |||||||||||||||| |||||||||||||| |||||||||||    
T  33035810 cacatataattacactgaattatatgatttattcaaattatta 33035852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 264 - 309
Target Start/End: Original strand, 6471897 - 6471942
Alignment:
Q  264 acacatataattacactaaattatatgatttactcaaattattagc 309  Q
    ||||||||||||||||| |||||| |||||| ||||||||||||||    
T  6471897 acacatataattacactgaattatgtgattttctcaaattattagc 6471942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 261 - 310
Target Start/End: Complemental strand, 34879404 - 34879355
Alignment:
Q  261 tcgacacatataattacactaaattatatgatttactcaaattattagcg 310  Q
    ||||||||||| |||||||| ||||||||||||| |||||||| ||||||    
T  34879404 tcgacacatattattacactgaattatatgattttctcaaatttttagcg 34879355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 267 - 308
Target Start/End: Complemental strand, 35017085 - 35017044
Alignment:
Q  267 catataattacactaaattatatgatttactcaaattattag 308  Q
    ||||||||||||||||||||| |||||| |||||||||||||    
T  35017085 catataattacactaaattatgtgattttctcaaattattag 35017044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 264 - 309
Target Start/End: Complemental strand, 39205931 - 39205886
Alignment:
Q  264 acacatataattacactaaattatatgatttactcaaattattagc 309  Q
    ||||||||||||||||  ||||||||||||| ||||||||||||||    
T  39205931 acacatataattacacctaattatatgattttctcaaattattagc 39205886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 262 - 310
Target Start/End: Original strand, 30502394 - 30502442
Alignment:
Q  262 cgacacatataattacactaaattatatgatttactcaaattattagcg 310  Q
    ||||||||||||||||||| |||||  |||||| |||||||||||||||    
T  30502394 cgacacatataattacactgaattaagtgattttctcaaattattagcg 30502442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 262 - 310
Target Start/End: Original strand, 30542737 - 30542785
Alignment:
Q  262 cgacacatataattacactaaattatatgatttactcaaattattagcg 310  Q
    ||||||||||||||||||| |||||  |||||| |||||||||||||||    
T  30542737 cgacacatataattacactgaattaagtgattttctcaaattattagcg 30542785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 261 - 309
Target Start/End: Original strand, 41091262 - 41091310
Alignment:
Q  261 tcgacacatataattacactaaattatatgatttactcaaattattagc 309  Q
    |||||||||||||||||||| |||||| |||||| ||||||| ||||||    
T  41091262 tcgacacatataattacactgaattatgtgattttctcaaatcattagc 41091310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 262 - 305
Target Start/End: Complemental strand, 14873570 - 14873527
Alignment:
Q  262 cgacacatataattacactaaattatatgatttactcaaattat 305  Q
    |||||||||||||||||||||||||| || ||| ||||||||||    
T  14873570 cgacacatataattacactaaattatgtgcttttctcaaattat 14873527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 262 - 317
Target Start/End: Complemental strand, 23221036 - 23220981
Alignment:
Q  262 cgacacatataattacactaaattatatgatttactcaaattattagcgatgtcga 317  Q
    |||||||||| || |||||||||||| ||||||  |||||||||||||| ||||||    
T  23221036 cgacacatatgataacactaaattatgtgattttatcaaattattagcggtgtcga 23220981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 266 - 309
Target Start/End: Complemental strand, 31682082 - 31682040
Alignment:
Q  266 acatataattacactaaattatatgatttactcaaattattagc 309  Q
    ||||||||||||||||||||||||||||| ||| ||||||||||    
T  31682082 acatataattacactaaattatatgattttctc-aattattagc 31682040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 262 - 316
Target Start/End: Complemental strand, 6035535 - 6035482
Alignment:
Q  262 cgacacatataattacactaaattatatgatttactcaaattattagcgatgtcg 316  Q
    ||||| ||||||||||||| |||||||| |||| ||||||||||||||| |||||    
T  6035535 cgacaaatataattacactgaattatattattt-ctcaaattattagcggtgtcg 6035482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 268 - 318
Target Start/End: Complemental strand, 10022679 - 10022629
Alignment:
Q  268 atataattacactaaattatatgatttactcaaattattagcgatgtcgat 318  Q
    ||||||||||||| |||||||||||||  ||||||||| | ||||||||||    
T  10022679 atataattacactgaattatatgattttatcaaattatcaacgatgtcgat 10022629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 262 - 304
Target Start/End: Complemental strand, 15086524 - 15086482
Alignment:
Q  262 cgacacatataattacactaaattatatgatttactcaaatta 304  Q
    ||||||||||||||||| || |||||||||||| |||||||||    
T  15086524 cgacacatataattacattacattatatgattttctcaaatta 15086482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 272 - 318
Target Start/End: Complemental strand, 19438386 - 19438340
Alignment:
Q  272 aattacactaaattatatgatttactcaaattattagcgatgtcgat 318  Q
    ||||||||| |||||| |||||| |||||||||| ||||||||||||    
T  19438386 aattacactgaattatgtgattttctcaaattatcagcgatgtcgat 19438340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 261 - 315
Target Start/End: Original strand, 23015994 - 23016048
Alignment:
Q  261 tcgacacatataattacactaaattatatgatttactcaaattattagcgatgtc 315  Q
    ||||||| |||||||||||| |||||| |||||| ||||||| |||| |||||||    
T  23015994 tcgacacctataattacactgaattatgtgattttctcaaatgattaacgatgtc 23016048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 262 - 316
Target Start/End: Original strand, 28588680 - 28588734
Alignment:
Q  262 cgacacatataattacactaaattatatgatttactcaaattattagcgatgtcg 316  Q
    |||||| |||||||||||| |||||| |||||| |||||||||||| || |||||    
T  28588680 cgacacctataattacactgaattatgtgattttctcaaattattaccggtgtcg 28588734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 262 - 307
Target Start/End: Complemental strand, 25863257 - 25863212
Alignment:
Q  262 cgacacatataattacactaaattatatgatttactcaaattatta 307  Q
    |||||| |||||||||||| |||||||| |||| ||||||||||||    
T  25863257 cgacacttataattacactgaattatatcattttctcaaattatta 25863212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 264 - 309
Target Start/End: Complemental strand, 28473984 - 28473939
Alignment:
Q  264 acacatataattacactaaattatatgatttactcaaattattagc 309  Q
    ||||| ||||||||||||||||||| ||||| ||||||||| ||||    
T  28473984 acacacataattacactaaattatacgattttctcaaattaatagc 28473939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 262 - 307
Target Start/End: Complemental strand, 43554574 - 43554529
Alignment:
Q  262 cgacacatataattacactaaattatatgatttactcaaattatta 307  Q
    |||||| ||| ||||||||||||||||| |||| ||||||||||||    
T  43554574 cgacacctatgattacactaaattatatcattttctcaaattatta 43554529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 42; Significance: 0.00000000000002; HSPs: 19)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 262 - 307
Target Start/End: Original strand, 30527601 - 30527646
Alignment:
Q  262 cgacacatataattacactaaattatatgatttactcaaattatta 307  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||    
T  30527601 cgacacatataattacactaaattatatgattttctcaaattatta 30527646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 264 - 316
Target Start/End: Complemental strand, 21616813 - 21616761
Alignment:
Q  264 acacatataattacactaaattatatgatttactcaaattattagcgatgtcg 316  Q
    ||||||||||||||||| |||||| |||||| ||||||||||||||| |||||    
T  21616813 acacatataattacactgaattatgtgattttctcaaattattagcggtgtcg 21616761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 262 - 310
Target Start/End: Original strand, 34691811 - 34691859
Alignment:
Q  262 cgacacatataattacactaaattatatgatttactcaaattattagcg 310  Q
    ||||||||||||||||||| |||||||||||||  ||||||||||||||    
T  34691811 cgacacatataattacactgaattatatgattttatcaaattattagcg 34691859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 262 - 310
Target Start/End: Original strand, 34714223 - 34714271
Alignment:
Q  262 cgacacatataattacactaaattatatgatttactcaaattattagcg 310  Q
    ||||||||||||||||||| |||||||||||||  ||||||||||||||    
T  34714223 cgacacatataattacactgaattatatgattttatcaaattattagcg 34714271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 261 - 316
Target Start/End: Original strand, 37411249 - 37411304
Alignment:
Q  261 tcgacacatataattacactaaattatatgatttactcaaattattagcgatgtcg 316  Q
    |||||||||||||| ||||| |||||| |||||| ||||||||||||||| |||||    
T  37411249 tcgacacatataatcacactgaattatgtgattttctcaaattattagcggtgtcg 37411304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 262 - 308
Target Start/End: Complemental strand, 5367245 - 5367199
Alignment:
Q  262 cgacacatataattacactaaattatatgatttactcaaattattag 308  Q
    ||||||||||||||||||| |||||| |||||| |||||||||||||    
T  5367245 cgacacatataattacactgaattatgtgatttcctcaaattattag 5367199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 262 - 316
Target Start/End: Complemental strand, 23718079 - 23718025
Alignment:
Q  262 cgacacatataattacactaaattatatgatttactcaaattattagcgatgtcg 316  Q
    ||||||||||||||||||| |||||| ||| || ||||||||||||||| |||||    
T  23718079 cgacacatataattacactgaattatgtgactttctcaaattattagcggtgtcg 23718025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 262 - 316
Target Start/End: Complemental strand, 24105751 - 24105697
Alignment:
Q  262 cgacacatataattacactaaattatatgatttactcaaattattagcgatgtcg 316  Q
    ||||||||||||||||||| |||||| ||| || ||||||||||||||| |||||    
T  24105751 cgacacatataattacactgaattatgtgactttctcaaattattagcggtgtcg 24105697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 262 - 315
Target Start/End: Complemental strand, 44860373 - 44860320
Alignment:
Q  262 cgacacatataattacactaaattatatgatttactcaaattattagcgatgtc 315  Q
    ||||||||||||||||||| ||||||  ||||| ||||||||||||||| ||||    
T  44860373 cgacacatataattacactgaattatgcgattttctcaaattattagcggtgtc 44860320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 267 - 310
Target Start/End: Complemental strand, 2423917 - 2423874
Alignment:
Q  267 catataattacactaaattatatgatttactcaaattattagcg 310  Q
    |||||||||| ||||||||||||||||| |||||||| ||||||    
T  2423917 catataattatactaaattatatgattttctcaaatttttagcg 2423874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 265 - 308
Target Start/End: Original strand, 2665897 - 2665940
Alignment:
Q  265 cacatataattacactaaattatatgatttactcaaattattag 308  Q
    ||||||||||||||||||||||| |||||| || ||||||||||    
T  2665897 cacatataattacactaaattatgtgattttctaaaattattag 2665940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 262 - 309
Target Start/End: Original strand, 20539680 - 20539727
Alignment:
Q  262 cgacacatataattacactaaattatatgatttactcaaattattagc 309  Q
    |||||| | ||||||||||||||||||||||||  |||||||||||||    
T  20539680 cgacacttgtaattacactaaattatatgattttttcaaattattagc 20539727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 262 - 316
Target Start/End: Complemental strand, 18276574 - 18276520
Alignment:
Q  262 cgacacatataattacactaaattatatgatttactcaaattattagcgatgtcg 316  Q
    ||||||| ||||||||||| |||||  |||||| ||||||||||||||| |||||    
T  18276574 cgacacacataattacactgaattaagtgattttctcaaattattagcggtgtcg 18276520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 262 - 316
Target Start/End: Original strand, 24975331 - 24975385
Alignment:
Q  262 cgacacatataattacactaaattatatgatttactcaaattattagcgatgtcg 316  Q
    |||| |||||| ||||||| ||||||| ||||| ||||||||||||||| |||||    
T  24975331 cgacgcatatatttacactgaattatacgattttctcaaattattagcggtgtcg 24975385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 266 - 316
Target Start/End: Complemental strand, 28677958 - 28677908
Alignment:
Q  266 acatataattacactaaattatatgatttactcaaattattagcgatgtcg 316  Q
    ||||||||||||||| |||||| ||||||  |||||||||||||| |||||    
T  28677958 acatataattacactgaattatgtgattttttcaaattattagcggtgtcg 28677908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 261 - 307
Target Start/End: Complemental strand, 36281739 - 36281693
Alignment:
Q  261 tcgacacatataattacactaaattatatgatttactcaaattatta 307  Q
    |||| |||||| ||||||||||||||| |||||| ||||||||||||    
T  36281739 tcgaaacatatgattacactaaattatgtgattttctcaaattatta 36281693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 262 - 307
Target Start/End: Original strand, 23354658 - 23354703
Alignment:
Q  262 cgacacatataattacactaaattatatgatttactcaaattatta 307  Q
    |||||| ||| ||||||||||||||||| |||| ||||||||||||    
T  23354658 cgacacctatgattacactaaattatatcattttctcaaattatta 23354703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 263 - 316
Target Start/End: Complemental strand, 31808129 - 31808076
Alignment:
Q  263 gacacatataattacactaaattatatgatttactcaaattattagcgatgtcg 316  Q
    |||||||||||||||||| |||||| ||||||  | |||||||||||| |||||    
T  31808129 gacacatataattacactgaattatgtgattttgttaaattattagcggtgtcg 31808076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 262 - 307
Target Start/End: Complemental strand, 39279728 - 39279683
Alignment:
Q  262 cgacacatataattacactaaattatatgatttactcaaattatta 307  Q
    ||||||||||||||||||| |||||| |||||| |||| |||||||    
T  39279728 cgacacatataattacactgaattatttgattttctcatattatta 39279683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 41; Significance: 0.00000000000008; HSPs: 19)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 261 - 317
Target Start/End: Complemental strand, 34897139 - 34897083
Alignment:
Q  261 tcgacacatataattacactaaattatatgatttactcaaattattagcgatgtcga 317  Q
    |||||||||||||||||||| |||||| |||||| ||||||||||||||| ||||||    
T  34897139 tcgacacatataattacactgaattatgtgattttctcaaattattagcggtgtcga 34897083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 265 - 316
Target Start/End: Original strand, 39954288 - 39954339
Alignment:
Q  265 cacatataattacactaaattatatgatttactcaaattattagcgatgtcg 316  Q
    ||||||||||||||||||||||| |||||| ||||||||||||||| |||||    
T  39954288 cacatataattacactaaattatgtgattttctcaaattattagcggtgtcg 39954339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 264 - 309
Target Start/End: Complemental strand, 14731763 - 14731718
Alignment:
Q  264 acacatataattacactaaattatatgatttactcaaattattagc 309  Q
    |||||||||||||||||||||||| |||||| ||||||||||||||    
T  14731763 acacatataattacactaaattatgtgattttctcaaattattagc 14731718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 262 - 309
Target Start/End: Original strand, 12606835 - 12606882
Alignment:
Q  262 cgacacatataattacactaaattatatgatttactcaaattattagc 309  Q
    ||||||||||||||||| | ||||||||||||| ||||||||||||||    
T  12606835 cgacacatataattacattgaattatatgattttctcaaattattagc 12606882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 262 - 309
Target Start/End: Original strand, 13844602 - 13844649
Alignment:
Q  262 cgacacatataattacactaaattatatgatttactcaaattattagc 309  Q
    ||||||||||||||||||| |||||| |||||| ||||||||||||||    
T  13844602 cgacacatataattacactcaattatgtgattttctcaaattattagc 13844649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 263 - 310
Target Start/End: Original strand, 20785472 - 20785519
Alignment:
Q  263 gacacatataattacactaaattatatgatttactcaaattattagcg 310  Q
    |||||||||||||||| |||||||| |||||| |||||||||||||||    
T  20785472 gacacatataattacattaaattatgtgatttcctcaaattattagcg 20785519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 263 - 316
Target Start/End: Original strand, 24362209 - 24362262
Alignment:
Q  263 gacacatataattacactaaattatatgatttactcaaattattagcgatgtcg 316  Q
    |||||||||||||||||| |||||| |||||  ||||||||||||||| |||||    
T  24362209 gacacatataattacactgaattatgtgattctctcaaattattagcggtgtcg 24362262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 262 - 307
Target Start/End: Original strand, 33405390 - 33405435
Alignment:
Q  262 cgacacatataattacactaaattatatgatttactcaaattatta 307  Q
    |||||||||||||||||||||||||| || ||| ||||||||||||    
T  33405390 cgacacatataattacactaaattatgtgtttttctcaaattatta 33405435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 262 - 314
Target Start/End: Complemental strand, 34223000 - 34222948
Alignment:
Q  262 cgacacatataattacactaaattatatgatttactcaaattattagcgatgt 314  Q
    ||||||||||||||||||| |||||| ||||||  | ||||||||||||||||    
T  34223000 cgacacatataattacacttaattatgtgattttattaaattattagcgatgt 34222948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 262 - 309
Target Start/End: Original strand, 31236583 - 31236630
Alignment:
Q  262 cgacacatataattacactaaattatatgatttactcaaattattagc 309  Q
    ||||||||||||||||| | |||||| |||||| ||||||||||||||    
T  31236583 cgacacatataattacattgaattatgtgattttctcaaattattagc 31236630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 263 - 309
Target Start/End: Complemental strand, 3025603 - 3025557
Alignment:
Q  263 gacacatataattacactaaattatatgatttactcaaattattagc 309  Q
    ||||| |||||||||||| |||||| |||||| ||||||||||||||    
T  3025603 gacacctataattacactgaattatgtgattttctcaaattattagc 3025557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 266 - 316
Target Start/End: Complemental strand, 4611583 - 4611533
Alignment:
Q  266 acatataattacactaaattatatgatttactcaaattattagcgatgtcg 316  Q
    ||||||||||||||| |||||| | |||| ||||||||||||||| |||||    
T  4611583 acatataattacactgaattatgttattttctcaaattattagcggtgtcg 4611533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 262 - 316
Target Start/End: Complemental strand, 8343025 - 8342971
Alignment:
Q  262 cgacacatataattacactaaattatatgatttactcaaattattagcgatgtcg 316  Q
    |||||| | ||||||||||||||||| ||||||  ||||||||||||| ||||||    
T  8343025 cgacacttgtaattacactaaattatgtgattttttcaaattattagctatgtcg 8342971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 262 - 308
Target Start/End: Complemental strand, 14134752 - 14134706
Alignment:
Q  262 cgacacatataattacactaaattatatgatttactcaaattattag 308  Q
    ||||| ||||||||||||| |||||| |||||| |||||||||||||    
T  14134752 cgacatatataattacactgaattatgtgattttctcaaattattag 14134706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 262 - 308
Target Start/End: Original strand, 15816135 - 15816181
Alignment:
Q  262 cgacacatataattacactaaattatatgatttactcaaattattag 308  Q
    |||||| ||||||||||||||||||| ||||||  ||||||||||||    
T  15816135 cgacacttataattacactaaattatgtgattttttcaaattattag 15816181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 262 - 307
Target Start/End: Original strand, 4786344 - 4786389
Alignment:
Q  262 cgacacatataattacactaaattatatgatttactcaaattatta 307  Q
    ||||||||||||||||||| |||||| |||||| || |||||||||    
T  4786344 cgacacatataattacactgaattatgtgattttcttaaattatta 4786389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 271 - 316
Target Start/End: Complemental strand, 8343360 - 8343315
Alignment:
Q  271 taattacactaaattatatgatttactcaaattattagcgatgtcg 316  Q
    ||||||||||||||||| ||||||  ||||||||||||| ||||||    
T  8343360 taattacactaaattatgtgattttttcaaattattagctatgtcg 8343315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 262 - 307
Target Start/End: Original strand, 11927092 - 11927137
Alignment:
Q  262 cgacacatataattacactaaattatatgatttactcaaattatta 307  Q
    ||||||||||||||||||| |||||| ||||||  |||||||||||    
T  11927092 cgacacatataattacactgaattatgtgattttatcaaattatta 11927137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 262 - 307
Target Start/End: Complemental strand, 39820482 - 39820437
Alignment:
Q  262 cgacacatataattacactaaattatatgatttactcaaattatta 307  Q
    |||||| ||| ||||||||||||||||| |||| ||||||||||||    
T  39820482 cgacacctatgattacactaaattatatcattttctcaaattatta 39820437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 41; Significance: 0.00000000000008; HSPs: 31)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 262 - 310
Target Start/End: Complemental strand, 24832641 - 24832593
Alignment:
Q  262 cgacacatataattacactaaattatatgatttactcaaattattagcg 310  Q
    ||||||||||||||||||||||||||| ||||| |||||||||||||||    
T  24832641 cgacacatataattacactaaattataagattttctcaaattattagcg 24832593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 262 - 309
Target Start/End: Complemental strand, 7086848 - 7086801
Alignment:
Q  262 cgacacatataattacactaaattatatgatttactcaaattattagc 309  Q
    |||||||||||||||||||||||||| |||||| ||||||||||||||    
T  7086848 cgacacatataattacactaaattatgtgattttctcaaattattagc 7086801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 263 - 316
Target Start/End: Complemental strand, 19040404 - 19040351
Alignment:
Q  263 gacacatataattacactaaattatatgatttactcaaattattagcgatgtcg 316  Q
    |||||||||||||||||| |||||| |||||| ||||||||||||||| |||||    
T  19040404 gacacatataattacactgaattatgtgattttctcaaattattagcggtgtcg 19040351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 262 - 310
Target Start/End: Original strand, 7265599 - 7265647
Alignment:
Q  262 cgacacatataattacactaaattatatgatttactcaaattattagcg 310  Q
    ||||||||||||||||||| |||||| |||||| |||||||||||||||    
T  7265599 cgacacatataattacactgaattatgtgattttctcaaattattagcg 7265647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 262 - 309
Target Start/End: Complemental strand, 7938169 - 7938122
Alignment:
Q  262 cgacacatataattacactaaattatatgatttactcaaattattagc 309  Q
    |||||| ||||||||||||||||||||||||||  |||||||||||||    
T  7938169 cgacacttataattacactaaattatatgattttttcaaattattagc 7938122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 262 - 309
Target Start/End: Original strand, 7996384 - 7996431
Alignment:
Q  262 cgacacatataattacactaaattatatgatttactcaaattattagc 309  Q
    |||| |||||||||||||| ||||||||||||| ||||||||||||||    
T  7996384 cgacgcatataattacactgaattatatgattttctcaaattattagc 7996431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 262 - 309
Target Start/End: Complemental strand, 8022417 - 8022370
Alignment:
Q  262 cgacacatataattacactaaattatatgatttactcaaattattagc 309  Q
    |||| |||||||||||||| ||||||||||||| ||||||||||||||    
T  8022417 cgacgcatataattacactgaattatatgattttctcaaattattagc 8022370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 262 - 309
Target Start/End: Original strand, 9025500 - 9025547
Alignment:
Q  262 cgacacatataattacactaaattatatgatttactcaaattattagc 309  Q
    ||||||||||||||||||| |||||| |||||| ||||||||||||||    
T  9025500 cgacacatataattacactgaattatgtgattttctcaaattattagc 9025547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 261 - 316
Target Start/End: Complemental strand, 10842586 - 10842531
Alignment:
Q  261 tcgacacatataattacactaaattatatgatttactcaaattattagcgatgtcg 316  Q
    ||||||||||| ||||||||||||||| ||||||  |||||||||||||| |||||    
T  10842586 tcgacacatatgattacactaaattatgtgattttttcaaattattagcggtgtcg 10842531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 262 - 316
Target Start/End: Original strand, 5732516 - 5732570
Alignment:
Q  262 cgacacatataattacactaaattatatgatttactcaaattattagcgatgtcg 316  Q
    |||||||||||||||||||||| ||| |||||| |||||||||||| || |||||    
T  5732516 cgacacatataattacactaaaatatgtgattttctcaaattattaacggtgtcg 5732570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 262 - 308
Target Start/End: Original strand, 9195760 - 9195806
Alignment:
Q  262 cgacacatataattacactaaattatatgatttactcaaattattag 308  Q
    |||||||||||||||||||||||||| | |||| |||||||||||||    
T  9195760 cgacacatataattacactaaattatgtcattttctcaaattattag 9195806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 262 - 310
Target Start/End: Complemental strand, 6665266 - 6665218
Alignment:
Q  262 cgacacatataattacactaaattatatgatttactcaaattattagcg 310  Q
    ||||||| |||||||| || |||||| ||||||||||||||||||||||    
T  6665266 cgacacaaataattactctgaattatgtgatttactcaaattattagcg 6665218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 261 - 317
Target Start/End: Complemental strand, 13851790 - 13851734
Alignment:
Q  261 tcgacacatataattacactaaattatatgatttactcaaattattagcgatgtcga 317  Q
    |||||||||||||||||||| |||||  | |||| ||||||||||||||| ||||||    
T  13851790 tcgacacatataattacactgaattacgttattttctcaaattattagcggtgtcga 13851734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 261 - 309
Target Start/End: Complemental strand, 26562743 - 26562695
Alignment:
Q  261 tcgacacatataattacactaaattatatgatttactcaaattattagc 309  Q
    |||||||||||||||||||| |||||| |||||| |||||||| |||||    
T  26562743 tcgacacatataattacactgaattatgtgattttctcaaatttttagc 26562695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 262 - 310
Target Start/End: Original strand, 30866150 - 30866198
Alignment:
Q  262 cgacacatataattacactaaattatatgatttactcaaattattagcg 310  Q
    ||||||||||||||||| | |||||| |||||| |||||||||||||||    
T  30866150 cgacacatataattacattgaattatgtgattttctcaaattattagcg 30866198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 262 - 314
Target Start/End: Original strand, 34073353 - 34073405
Alignment:
Q  262 cgacacatataattacactaaattatatgatttactcaaattattagcgatgt 314  Q
    |||| |||||||||||||| ||||||  ||||| |||||||||||||||||||    
T  34073353 cgacccatataattacactgaattatgagattttctcaaattattagcgatgt 34073405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 270 - 309
Target Start/End: Original strand, 8805586 - 8805625
Alignment:
Q  270 ataattacactaaattatatgatttactcaaattattagc 309  Q
    |||||||||||||||||| |||||| ||||||||||||||    
T  8805586 ataattacactaaattatgtgattttctcaaattattagc 8805625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 264 - 315
Target Start/End: Original strand, 10888982 - 10889033
Alignment:
Q  264 acacatataattacactaaattatatgatttactcaaattattagcgatgtc 315  Q
    ||||||||||| |||||||||||| ||||||  |||||||||||||| ||||    
T  10888982 acacatataatcacactaaattatgtgattttatcaaattattagcggtgtc 10889033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 260 - 303
Target Start/End: Original strand, 11591874 - 11591917
Alignment:
Q  260 gtcgacacatataattacactaaattatatgatttactcaaatt 303  Q
    ||||||||||||||||||||| |||||| |||||| ||||||||    
T  11591874 gtcgacacatataattacactgaattatgtgattttctcaaatt 11591917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 262 - 305
Target Start/End: Original strand, 13364711 - 13364754
Alignment:
Q  262 cgacacatataattacactaaattatatgatttactcaaattat 305  Q
    |||||||||| |||||||| ||||||||||||| ||||||||||    
T  13364711 cgacacatatgattacactgaattatatgattttctcaaattat 13364754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 262 - 309
Target Start/End: Original strand, 21924941 - 21924988
Alignment:
Q  262 cgacacatataattacactaaattatatgatttactcaaattattagc 309  Q
    ||||||||||||||||||| |||||| |||| | ||||||||||||||    
T  21924941 cgacacatataattacactgaattatttgatattctcaaattattagc 21924988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 262 - 316
Target Start/End: Complemental strand, 7378032 - 7377978
Alignment:
Q  262 cgacacatataattacactaaattatatgatttactcaaattattagcgatgtcg 316  Q
    ||||||||||||||||| | |||||| |||||| |||||||| |||||| |||||    
T  7378032 cgacacatataattacattgaattatgtgattttctcaaatttttagcggtgtcg 7377978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 262 - 316
Target Start/End: Complemental strand, 9027231 - 9027177
Alignment:
Q  262 cgacacatataattacactaaattatatgatttactcaaattattagcgatgtcg 316  Q
    ||||||||||||||||||  |||||| |||||  ||||||||||||||| |||||    
T  9027231 cgacacatataattacacggaattatgtgattatctcaaattattagcggtgtcg 9027177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 262 - 316
Target Start/End: Complemental strand, 9629436 - 9629382
Alignment:
Q  262 cgacacatataattacactaaattatatgatttactcaaattattagcgatgtcg 316  Q
    ||||||||||||||||| | |||||| |||||| ||||||||||| ||| |||||    
T  9629436 cgacacatataattacattgaattatgtgattttctcaaattattggcggtgtcg 9629382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 262 - 316
Target Start/End: Complemental strand, 9658932 - 9658878
Alignment:
Q  262 cgacacatataattacactaaattatatgatttactcaaattattagcgatgtcg 316  Q
    ||||| ||||||||||||| |||||| |||||| || |||||||||||| |||||    
T  9658932 cgacaaatataattacactgaattatgtgattttcttaaattattagcggtgtcg 9658878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 261 - 307
Target Start/End: Complemental strand, 21142172 - 21142126
Alignment:
Q  261 tcgacacatataattacactaaattatatgatttactcaaattatta 307  Q
    ||||||||||||| || ||| ||||||||||||| ||||||||||||    
T  21142172 tcgacacatataactagactgaattatatgattttctcaaattatta 21142126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 262 - 308
Target Start/End: Original strand, 26178687 - 26178733
Alignment:
Q  262 cgacacatataattacactaaattatatgatttactcaaattattag 308  Q
    |||||||||| ||||||||||||||| ||||||  ||||||||||||    
T  26178687 cgacacatatgattacactaaattatgtgattttatcaaattattag 26178733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 262 - 307
Target Start/End: Complemental strand, 6389796 - 6389751
Alignment:
Q  262 cgacacatataattacactaaattatatgatttactcaaattatta 307  Q
    |||||| ||| ||||||||||||||||| |||| ||||||||||||    
T  6389796 cgacacctatgattacactaaattatatcattttctcaaattatta 6389751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 262 - 307
Target Start/End: Complemental strand, 9617487 - 9617442
Alignment:
Q  262 cgacacatataattacactaaattatatgatttactcaaattatta 307  Q
    ||||||||||||||||| | |||||| |||||| ||||||||||||    
T  9617487 cgacacatataattacattgaattatgtgattttctcaaattatta 9617442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 262 - 307
Target Start/End: Original strand, 17168469 - 17168514
Alignment:
Q  262 cgacacatataattacactaaattatatgatttactcaaattatta 307  Q
    |||||| ||| ||||||||||||||||| |||| ||||||||||||    
T  17168469 cgacacctattattacactaaattatatcattttctcaaattatta 17168514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 263 - 308
Target Start/End: Complemental strand, 17302399 - 17302354
Alignment:
Q  263 gacacatataattacactaaattatatgatttactcaaattattag 308  Q
    ||||||||||||||||| ||||||| |||||| || ||||||||||    
T  17302399 gacacatataattacacaaaattatgtgattttcttaaattattag 17302354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 40; Significance: 0.0000000000003; HSPs: 17)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 263 - 310
Target Start/End: Original strand, 49505161 - 49505208
Alignment:
Q  263 gacacatataattacactaaattatatgatttactcaaattattagcg 310  Q
    ||||||||||||||||||||||||| |||||| |||||||||||||||    
T  49505161 gacacatataattacactaaattatgtgattttctcaaattattagcg 49505208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 262 - 316
Target Start/End: Complemental strand, 8383310 - 8383256
Alignment:
Q  262 cgacacatataattacactaaattatatgatttactcaaattattagcgatgtcg 316  Q
    |||||| |||||||||||| ||||||||||||| ||||||||||||||| |||||    
T  8383310 cgacacttataattacactgaattatatgattttctcaaattattagcggtgtcg 8383256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 264 - 309
Target Start/End: Original strand, 11313808 - 11313853
Alignment:
Q  264 acacatataattacactaaattatatgatttactcaaattattagc 309  Q
    |||||||||||||||||||||||| |||||| ||||||||||||||    
T  11313808 acacatataattacactaaattatgtgattttctcaaattattagc 11313853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 263 - 316
Target Start/End: Original strand, 32804547 - 32804600
Alignment:
Q  263 gacacatataattacactaaattatatgatttactcaaattattagcgatgtcg 316  Q
    ||||||||||||||||||||||||| |||||| |||||||||||| || |||||    
T  32804547 gacacatataattacactaaattatgtgattttctcaaattattaacggtgtcg 32804600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 262 - 310
Target Start/End: Original strand, 8039841 - 8039889
Alignment:
Q  262 cgacacatataattacactaaattatatgatttactcaaattattagcg 310  Q
    ||||||||||||||||||| |||||||| |||| |||||||||||||||    
T  8039841 cgacacatataattacactgaattatataattttctcaaattattagcg 8039889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 261 - 308
Target Start/End: Complemental strand, 29508498 - 29508451
Alignment:
Q  261 tcgacacatataattacactaaattatatgatttactcaaattattag 308  Q
    |||||||||||||||||||| |||||||||||||  ||||||||||||    
T  29508498 tcgacacatataattacactgaattatatgattttttcaaattattag 29508451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 262 - 316
Target Start/End: Complemental strand, 7928503 - 7928449
Alignment:
Q  262 cgacacatataattacactaaattatatgatttactcaaattattagcgatgtcg 316  Q
    ||||||||||||||||||| |||||| ||||||  |||||||||||||| |||||    
T  7928503 cgacacatataattacactgaattatgtgattttttcaaattattagcggtgtcg 7928449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 262 - 316
Target Start/End: Complemental strand, 11665997 - 11665943
Alignment:
Q  262 cgacacatataattacactaaattatatgatttactcaaattattagcgatgtcg 316  Q
    |||||||||||||||||||||||| | ||||||  |||||||||||||| |||||    
T  11665997 cgacacatataattacactaaattgtgtgattttatcaaattattagcgttgtcg 11665943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 270 - 309
Target Start/End: Original strand, 27277852 - 27277891
Alignment:
Q  270 ataattacactaaattatatgatttactcaaattattagc 309  Q
    |||||||||||||||||| |||||| ||||||||||||||    
T  27277852 ataattacactaaattatgtgattttctcaaattattagc 27277891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 266 - 316
Target Start/End: Complemental strand, 1438853 - 1438803
Alignment:
Q  266 acatataattacactaaattatatgatttactcaaattattagcgatgtcg 316  Q
    ||||||||||| ||| |||||| |||||| |||||||| ||||||||||||    
T  1438853 acatataattatactgaattatgtgattttctcaaattgttagcgatgtcg 1438803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 262 - 308
Target Start/End: Original strand, 17005625 - 17005671
Alignment:
Q  262 cgacacatataattacactaaattatatgatttactcaaattattag 308  Q
    |||||| |||||||||||| |||||||||||||  ||||||||||||    
T  17005625 cgacacttataattacactgaattatatgattttatcaaattattag 17005671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 264 - 309
Target Start/End: Complemental strand, 10455841 - 10455796
Alignment:
Q  264 acacatataattacactaaattatatgatttactcaaattattagc 309  Q
    ||||||||||||||||| | ||||||||||| |||| |||||||||    
T  10455841 acacatataattacacttagttatatgattttctcatattattagc 10455796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 262 - 315
Target Start/End: Original strand, 10690268 - 10690321
Alignment:
Q  262 cgacacatataattacactaaattatatgatttactcaaattattagcgatgtc 315  Q
    ||||| ||||||||||||| |||||| |||||| |||| |||||||||| ||||    
T  10690268 cgacaaatataattacactgaattatgtgattttctcagattattagcggtgtc 10690321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 270 - 315
Target Start/End: Complemental strand, 11252023 - 11251978
Alignment:
Q  270 ataattacactaaattatatgatttactcaaattattagcgatgtc 315  Q
    ||||||||||| |||||| |||||| |||||||||||||| |||||    
T  11252023 ataattacactgaattatgtgattttctcaaattattagcaatgtc 11251978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 261 - 314
Target Start/End: Complemental strand, 11658869 - 11658816
Alignment:
Q  261 tcgacacatataattacactaaattatatgatttactcaaattattagcgatgt 314  Q
    |||||||||||||| ||||| ||||||  ||||| |||||||||||| ||||||    
T  11658869 tcgacacatataatcacactgaattatgcgattttctcaaattattaacgatgt 11658816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 262 - 315
Target Start/End: Original strand, 34307786 - 34307839
Alignment:
Q  262 cgacacatataattacactaaattatatgatttactcaaattattagcgatgtc 315  Q
    |||||| |||||||||||| || ||| |||||| ||||||||||||||| ||||    
T  34307786 cgacacttataattacactgaaatatgtgattttctcaaattattagcggtgtc 34307839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 263 - 316
Target Start/End: Original strand, 48202276 - 48202329
Alignment:
Q  263 gacacatataattacactaaattatatgatttactcaaattattagcgatgtcg 316  Q
    |||||||||||||||| |||||||| |||||| |||||| |||||  |||||||    
T  48202276 gacacatataattacattaaattatgtgattttctcaaactattatggatgtcg 48202329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 39; Significance: 0.000000000001; HSPs: 32)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 262 - 316
Target Start/End: Complemental strand, 38503373 - 38503319
Alignment:
Q  262 cgacacatataattacactaaattatatgatttactcaaattattagcgatgtcg 316  Q
    ||||||||||||||||||| || |||||||||| ||||||||||||||| |||||    
T  38503373 cgacacatataattacactgaaatatatgattttctcaaattattagcggtgtcg 38503319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 263 - 315
Target Start/End: Original strand, 7918218 - 7918270
Alignment:
Q  263 gacacatataattacactaaattatatgatttactcaaattattagcgatgtc 315  Q
    |||||||||||||||||| |||||| |||||| ||||||||||||| ||||||    
T  7918218 gacacatataattacactgaattatgtgattttctcaaattattagtgatgtc 7918270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 264 - 318
Target Start/End: Original strand, 11605943 - 11605997
Alignment:
Q  264 acacatataattacactaaattatatgatttactcaaattattagcgatgtcgat 318  Q
    |||||| ||||| |||| |||||||||||||  ||||||||||||||||||||||    
T  11605943 acacatgtaatttcactgaattatatgattttttcaaattattagcgatgtcgat 11605997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 266 - 308
Target Start/End: Original strand, 14332652 - 14332694
Alignment:
Q  266 acatataattacactaaattatatgatttactcaaattattag 308  Q
    |||||||||||||||||||||| |||||| |||||||||||||    
T  14332652 acatataattacactaaattatgtgattttctcaaattattag 14332694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 263 - 309
Target Start/End: Original strand, 34712390 - 34712436
Alignment:
Q  263 gacacatataattacactaaattatatgatttactcaaattattagc 309  Q
    ||||||||||||||||||||||||| | |||| ||||||||||||||    
T  34712390 gacacatataattacactaaattatgttattttctcaaattattagc 34712436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 262 - 316
Target Start/End: Complemental strand, 36878514 - 36878460
Alignment:
Q  262 cgacacatataattacactaaattatatgatttactcaaattattagcgatgtcg 316  Q
    |||||| |||||||||||| |||||| |||||| ||||||||||||||| |||||    
T  36878514 cgacacctataattacactgaattatgtgattttctcaaattattagcggtgtcg 36878460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 262 - 316
Target Start/End: Original strand, 39953152 - 39953206
Alignment:
Q  262 cgacacatataattacactaaattatatgatttactcaaattattagcgatgtcg 316  Q
    ||||||||| |||||||||||||||| |||||| || |||||||||||| |||||    
T  39953152 cgacacatacaattacactaaattatgtgattttctaaaattattagcggtgtcg 39953206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 262 - 307
Target Start/End: Original strand, 1864886 - 1864931
Alignment:
Q  262 cgacacatataattacactaaattatatgatttactcaaattatta 307  Q
    ||||||||||||||||||| |||||| |||||| ||||||||||||    
T  1864886 cgacacatataattacactgaattatgtgattttctcaaattatta 1864931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 262 - 307
Target Start/End: Original strand, 39130773 - 39130818
Alignment:
Q  262 cgacacatataattacactaaattatatgatttactcaaattatta 307  Q
    |||||||||||||||||||||||||||| |||| || |||||||||    
T  39130773 cgacacatataattacactaaattatataattttctaaaattatta 39130818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 262 - 318
Target Start/End: Original strand, 9629906 - 9629962
Alignment:
Q  262 cgacacatataattacactaaattatatgatttactcaaattattagcgatgtcgat 318  Q
    |||||| |||||| ||||| |||||||||||||  |||||||||||||| |||||||    
T  9629906 cgacacttataatcacactgaattatatgattttatcaaattattagcggtgtcgat 9629962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 264 - 316
Target Start/End: Original strand, 25098563 - 25098615
Alignment:
Q  264 acacatataattacactaaattatatgatttactcaaattattagcgatgtcg 316  Q
    ||||||||||||||||| |||||| |||||| |||||||||| |||| |||||    
T  25098563 acacatataattacactgaattatgtgattttctcaaattatcagcggtgtcg 25098615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 264 - 308
Target Start/End: Original strand, 35999330 - 35999374
Alignment:
Q  264 acacatataattacactaaattatatgatttactcaaattattag 308  Q
    ||||||||||||| ||||||||||||||||| || ||||||||||    
T  35999330 acacatataattatactaaattatatgattttcttaaattattag 35999374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 262 - 310
Target Start/End: Complemental strand, 44482283 - 44482235
Alignment:
Q  262 cgacacatataattacactaaattatatgatttactcaaattattagcg 310  Q
    ||||||||||||||||||| |||||| |||||| |||||||||| ||||    
T  44482283 cgacacatataattacactgaattatgtgattttctcaaattataagcg 44482235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 262 - 309
Target Start/End: Original strand, 38075976 - 38076023
Alignment:
Q  262 cgacacatataattacactaaattatatgatttactcaaattattagc 309  Q
    |||||||||| |||||||| | |||| |||||||||||||||||||||    
T  38075976 cgacacatatgattacactgacttatgtgatttactcaaattattagc 38076023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 266 - 309
Target Start/End: Complemental strand, 40181920 - 40181877
Alignment:
Q  266 acatataattacactaaattatatgatttactcaaattattagc 309  Q
    ||||||||||||||| |||||| |||||| ||||||||||||||    
T  40181920 acatataattacactgaattatgtgattttctcaaattattagc 40181877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 262 - 309
Target Start/End: Original strand, 46348389 - 46348436
Alignment:
Q  262 cgacacatataattacactaaattatatgatttactcaaattattagc 309  Q
    |||||| | ||||||||||||||||||||||||  |||||||||||||    
T  46348389 cgacacttgtaattacactaaattatatgattttttcaaattattagc 46348436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 264 - 310
Target Start/End: Complemental strand, 6427401 - 6427355
Alignment:
Q  264 acacatataattacactaaattatatgatttactcaaattattagcg 310  Q
    ||||||||||||||| | |||||| |||||| |||||||||||||||    
T  6427401 acacatataattacattgaattatgtgattttctcaaattattagcg 6427355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 266 - 308
Target Start/End: Original strand, 12707883 - 12707925
Alignment:
Q  266 acatataattacactaaattatatgatttactcaaattattag 308  Q
    |||||||||| |||||||||||||||||| || ||||||||||    
T  12707883 acatataattgcactaaattatatgattttcttaaattattag 12707925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 266 - 308
Target Start/End: Original strand, 12713337 - 12713379
Alignment:
Q  266 acatataattacactaaattatatgatttactcaaattattag 308  Q
    |||||||||||||||||||||| |||||| || ||||||||||    
T  12713337 acatataattacactaaattatgtgattttcttaaattattag 12713379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 266 - 308
Target Start/End: Original strand, 12717428 - 12717470
Alignment:
Q  266 acatataattacactaaattatatgatttactcaaattattag 308  Q
    |||||||||||||||||||||| |||||| || ||||||||||    
T  12717428 acatataattacactaaattatgtgattttcttaaattattag 12717470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 262 - 316
Target Start/End: Original strand, 17831537 - 17831591
Alignment:
Q  262 cgacacatataattacactaaattatatgatttactcaaattattagcgatgtcg 316  Q
    |||||||||| |||||||| ||| || |||||| ||||||||||||||| |||||    
T  17831537 cgacacatatgattacactgaataatgtgattttctcaaattattagcggtgtcg 17831591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 262 - 316
Target Start/End: Complemental strand, 21530742 - 21530688
Alignment:
Q  262 cgacacatataattacactaaattatatgatttactcaaattattagcgatgtcg 316  Q
    |||||| |||||||| || |||||||||||||| |||||||||||| || |||||    
T  21530742 cgacacttataattataccaaattatatgattttctcaaattattaacggtgtcg 21530688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 263 - 305
Target Start/End: Complemental strand, 25361938 - 25361896
Alignment:
Q  263 gacacatataattacactaaattatatgatttactcaaattat 305  Q
    |||||||||||||||||| |||||| |||||| ||||||||||    
T  25361938 gacacatataattacactgaattatgtgattttctcaaattat 25361896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 262 - 316
Target Start/End: Original strand, 41877476 - 41877530
Alignment:
Q  262 cgacacatataattacactaaattatatgatttactcaaattattagcgatgtcg 316  Q
    |||||| | ||||||||||||||||| | |||| ||||||||||||||| |||||    
T  41877476 cgacacttgtaattacactaaattatgtaattttctcaaattattagcggtgtcg 41877530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 263 - 316
Target Start/End: Original strand, 398772 - 398825
Alignment:
Q  263 gacacatataattacactaaattatatgatttactcaaattattagcgatgtcg 316  Q
    ||||| |||||||||||| |||||| ||||||  |||||||||||||| |||||    
T  398772 gacacctataattacactgaattatgtgattttttcaaattattagcggtgtcg 398825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 263 - 308
Target Start/End: Complemental strand, 10233305 - 10233260
Alignment:
Q  263 gacacatataattacactaaattatatgatttactcaaattattag 308  Q
    |||||||||||||||||| |||||| |||||| ||||| |||||||    
T  10233305 gacacatataattacactgaattatgtgattttctcaatttattag 10233260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 264 - 309
Target Start/End: Complemental strand, 13436509 - 13436464
Alignment:
Q  264 acacatataattacactaaattatatgatttactcaaattattagc 309  Q
    ||||||||||||||||| |||||| |||||| || |||||||||||    
T  13436509 acacatataattacactgaattatgtgatttccttaaattattagc 13436464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 268 - 309
Target Start/End: Original strand, 16927197 - 16927238
Alignment:
Q  268 atataattacactaaattatatgatttactcaaattattagc 309  Q
    ||||||||||||| |||||||||||||  |||||||||||||    
T  16927197 atataattacactgaattatatgattttttcaaattattagc 16927238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 262 - 303
Target Start/End: Complemental strand, 25272535 - 25272494
Alignment:
Q  262 cgacacatataattacactaaattatatgatttactcaaatt 303  Q
    |||||| ||||||||||||||||||| |||||| ||||||||    
T  25272535 cgacacttataattacactaaattatgtgattttctcaaatt 25272494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 263 - 316
Target Start/End: Original strand, 32724105 - 32724158
Alignment:
Q  263 gacacatataattacactaaattatatgatttactcaaattattagcgatgtcg 316  Q
    |||||||||||||||| |||||||| | | || |||||||||||| ||||||||    
T  32724105 gacacatataattacattaaattatgtaaatttctcaaattattaacgatgtcg 32724158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 262 - 315
Target Start/End: Complemental strand, 34371766 - 34371714
Alignment:
Q  262 cgacacatataattacactaaattatatgatttactcaaattattagcgatgtc 315  Q
    ||||||||||||||||||| |||||| |||||| ||| ||||||||||| ||||    
T  34371766 cgacacatataattacactgaattatgtgattttctc-aattattagcggtgtc 34371714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 262 - 307
Target Start/End: Complemental strand, 52903302 - 52903257
Alignment:
Q  262 cgacacatataattacactaaattatatgatttactcaaattatta 307  Q
    ||||||||||||||||||| |||||||||||||  | |||||||||    
T  52903302 cgacacatataattacactgaattatatgattttattaaattatta 52903257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 36; Significance: 0.00000000008; HSPs: 29)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 262 - 309
Target Start/End: Complemental strand, 3721146 - 3721099
Alignment:
Q  262 cgacacatataattacactaaattatatgatttactcaaattattagc 309  Q
    ||||||||||||||| |||||||||| |||||| ||||||||||||||    
T  3721146 cgacacatataattatactaaattatgtgattttctcaaattattagc 3721099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 262 - 309
Target Start/End: Original strand, 7328697 - 7328744
Alignment:
Q  262 cgacacatataattacactaaattatatgatttactcaaattattagc 309  Q
    |||||||||||||||||||||||||| | |||| ||||||||||||||    
T  7328697 cgacacatataattacactaaattatgttattttctcaaattattagc 7328744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 262 - 316
Target Start/End: Complemental strand, 9482987 - 9482933
Alignment:
Q  262 cgacacatataattacactaaattatatgatttactcaaattattagcgatgtcg 316  Q
    ||||||||||||||||||| |||| | |||||| |||||||||| ||||||||||    
T  9482987 cgacacatataattacactgaattgtgtgattttctcaaattatcagcgatgtcg 9482933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 262 - 316
Target Start/End: Complemental strand, 20549844 - 20549790
Alignment:
Q  262 cgacacatataattacactaaattatatgatttactcaaattattagcgatgtcg 316  Q
    ||||||||||||||||||| |||||  |||||| ||||||||||||||| |||||    
T  20549844 cgacacatataattacactgaattacgtgattttctcaaattattagcggtgtcg 20549790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 262 - 316
Target Start/End: Original strand, 27093419 - 27093473
Alignment:
Q  262 cgacacatataattacactaaattatatgatttactcaaattattagcgatgtcg 316  Q
    |||| ||||||||||||||||||||| |||||| || |||||||||||| |||||    
T  27093419 cgacgcatataattacactaaattatgtgattttcttaaattattagcggtgtcg 27093473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 262 - 316
Target Start/End: Complemental strand, 27184882 - 27184828
Alignment:
Q  262 cgacacatataattacactaaattatatgatttactcaaattattagcgatgtcg 316  Q
    |||| ||||||||||||||||||||| |||||| || |||||||||||| |||||    
T  27184882 cgacgcatataattacactaaattatgtgattttcttaaattattagcggtgtcg 27184828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 268 - 317
Target Start/End: Complemental strand, 5236033 - 5235984
Alignment:
Q  268 atataattacactaaattatatgatttactcaaattattagcgatgtcga 317  Q
    |||||||||||||||||||||| |||| || |||||||||||| ||||||    
T  5236033 atataattacactaaattatataattttcttaaattattagcggtgtcga 5235984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 263 - 316
Target Start/End: Complemental strand, 5548728 - 5548675
Alignment:
Q  263 gacacatataattacactaaattatatgatttactcaaattattagcgatgtcg 316  Q
    |||||||||||||||||| |||||| |||||| |||||||||| |||| |||||    
T  5548728 gacacatataattacactgaattatttgattttctcaaattatcagcggtgtcg 5548675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 262 - 307
Target Start/End: Complemental strand, 15902875 - 15902830
Alignment:
Q  262 cgacacatataattacactaaattatatgatttactcaaattatta 307  Q
    |||||||||||||||||||||||||| ||||||  |||||||||||    
T  15902875 cgacacatataattacactaaattatgtgattttatcaaattatta 15902830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 263 - 316
Target Start/End: Complemental strand, 32308172 - 32308119
Alignment:
Q  263 gacacatataattacactaaattatatgatttactcaaattattagcgatgtcg 316  Q
    |||||||| ||||||||| |||||| |||||| ||||||||||||||| |||||    
T  32308172 gacacatacaattacactgaattatgtgattttctcaaattattagcggtgtcg 32308119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 264 - 316
Target Start/End: Original strand, 33384590 - 33384642
Alignment:
Q  264 acacatataattacactaaattatatgatttactcaaattattagcgatgtcg 316  Q
    ||||||||||||||||||||||||| ||||| |||| ||||||| || |||||    
T  33384590 acacatataattacactaaattataggattttctcagattattaacggtgtcg 33384642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 262 - 309
Target Start/End: Original strand, 3142084 - 3142131
Alignment:
Q  262 cgacacatataattacactaaattatatgatttactcaaattattagc 309  Q
    |||||||||| |||||| | ||||||||||||||||||| ||||||||    
T  3142084 cgacacatatgattacattgaattatatgatttactcaatttattagc 3142131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 264 - 307
Target Start/End: Complemental strand, 5233680 - 5233637
Alignment:
Q  264 acacatataattacactaaattatatgatttactcaaattatta 307  Q
    |||||||||||||||||| ||||| |||||| ||||||||||||    
T  5233680 acacatataattacactagattatgtgattttctcaaattatta 5233637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 264 - 315
Target Start/End: Complemental strand, 8160467 - 8160416
Alignment:
Q  264 acacatataattacactaaattatatgatttactcaaattattagcgatgtc 315  Q
    |||||||||||||||||||||||| | |||| || |||||||||||| ||||    
T  8160467 acacatataattacactaaattatgtaattttcttaaattattagcggtgtc 8160416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 263 - 310
Target Start/End: Complemental strand, 17851483 - 17851436
Alignment:
Q  263 gacacatataattacactaaattatatgatttactcaaattattagcg 310  Q
    |||||||||||||||||| |||||| |||||| || ||||||||||||    
T  17851483 gacacatataattacactgaattatgtgattttctaaaattattagcg 17851436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 262 - 316
Target Start/End: Complemental strand, 1433507 - 1433453
Alignment:
Q  262 cgacacatataattacactaaattatatgatttactcaaattattagcgatgtcg 316  Q
    |||||||||||||||||| |||| || |||||| |||||||||||| || |||||    
T  1433507 cgacacatataattacaccaaatgatgtgattttctcaaattattaacggtgtcg 1433453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 263 - 317
Target Start/End: Complemental strand, 2034493 - 2034439
Alignment:
Q  263 gacacatataattacactaaattatatgatttactcaaattattagcgatgtcga 317  Q
    ||||||||||  |||||||||||||||||| | ||||||||||||| | ||||||    
T  2034493 gacacatatatatacactaaattatatgatattctcaaattattagtggtgtcga 2034439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 262 - 316
Target Start/End: Complemental strand, 2948736 - 2948682
Alignment:
Q  262 cgacacatataattacactaaattatatgatttactcaaattattagcgatgtcg 316  Q
    |||||||||||||||||||||||||  |||||| || ||||||| |||| |||||    
T  2948736 cgacacatataattacactaaattacgtgattttctaaaattatcagcggtgtcg 2948682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 265 - 307
Target Start/End: Complemental strand, 16341546 - 16341504
Alignment:
Q  265 cacatataattacactaaattatatgatttactcaaattatta 307  Q
    |||||||||||||||| |||||| |||||| ||||||||||||    
T  16341546 cacatataattacacttaattatgtgattttctcaaattatta 16341504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 262 - 316
Target Start/End: Complemental strand, 19206103 - 19206049
Alignment:
Q  262 cgacacatataattacactaaattatatgatttactcaaattattagcgatgtcg 316  Q
    ||||||||||||||| | | |||||| |||||| ||||||||||||||| |||||    
T  19206103 cgacacatataattataatgaattatgtgattttctcaaattattagcggtgtcg 19206049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 262 - 316
Target Start/End: Original strand, 26329388 - 26329442
Alignment:
Q  262 cgacacatataattacactaaattatatgatttactcaaattattagcgatgtcg 316  Q
    ||||||||||||||||||| |||| | || ||| |||||||||||| ||||||||    
T  26329388 cgacacatataattacactgaattgtgtgtttttctcaaattattaacgatgtcg 26329442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 270 - 316
Target Start/End: Original strand, 29787383 - 29787429
Alignment:
Q  270 ataattacactaaattatatgatttactcaaattattagcgatgtcg 316  Q
    ||||||||||| |||||| |||||| ||||||||||||||| |||||    
T  29787383 ataattacactgaattatgtgattttctcaaattattagcggtgtcg 29787429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 262 - 307
Target Start/End: Original strand, 3520348 - 3520393
Alignment:
Q  262 cgacacatataattacactaaattatatgatttactcaaattatta 307  Q
    ||||||||||||||||| | ||||||||||||| ||||||| ||||    
T  3520348 cgacacatataattacattgaattatatgattttctcaaatgatta 3520393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 262 - 307
Target Start/End: Original strand, 8239056 - 8239101
Alignment:
Q  262 cgacacatataattacactaaattatatgatttactcaaattatta 307  Q
    ||||||||||||||||||| ||||||| ||||| || |||||||||    
T  8239056 cgacacatataattacactgaattataagattttcttaaattatta 8239101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 271 - 308
Target Start/End: Complemental strand, 11831476 - 11831439
Alignment:
Q  271 taattacactaaattatatgatttactcaaattattag 308  Q
    ||||||||||||||||||||||||  ||||||||||||    
T  11831476 taattacactaaattatatgattttttcaaattattag 11831439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 262 - 315
Target Start/End: Complemental strand, 21880205 - 21880152
Alignment:
Q  262 cgacacatataattacactaaattatatgatttactcaaattattagcgatgtc 315  Q
    |||||| | |||||||||| |||||| | |||| ||||||||||||||||||||    
T  21880205 cgacacttgtaattacactgaattatgtaattttctcaaattattagcgatgtc 21880152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 263 - 308
Target Start/End: Complemental strand, 22868094 - 22868049
Alignment:
Q  263 gacacatataattacactaaattatatgatttactcaaattattag 308  Q
    |||||||||||||||||| |||||| |||||| |||| ||||||||    
T  22868094 gacacatataattacactgaattatgtgattttctcatattattag 22868049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 262 - 307
Target Start/End: Original strand, 23128667 - 23128712
Alignment:
Q  262 cgacacatataattacactaaattatatgatttactcaaattatta 307  Q
    |||||||||| |||||||| ||||||||| ||| ||||||||||||    
T  23128667 cgacacatatgattacactgaattatatggttttctcaaattatta 23128712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 262 - 307
Target Start/End: Original strand, 29812670 - 29812715
Alignment:
Q  262 cgacacatataattacactaaattatatgatttactcaaattatta 307  Q
    |||||| ||| ||||||||||||||||| |||| ||||||||||||    
T  29812670 cgacacctatgattacactaaattatatcattttctcaaattatta 29812715  T

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Target: scaffold0022 (Bit Score: 35; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 261 - 307
Target Start/End: Complemental strand, 90897 - 90851
Alignment:
Q  261 tcgacacatataattacactaaattatatgatttactcaaattatta 307  Q
    |||||| ||||||||||||| ||||||||||||| ||||||||||||    
T  90897 tcgacatatataattacactgaattatatgattttctcaaattatta 90851  T

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Target: scaffold0123 (Bit Score: 34; Significance: 0.000000001; HSPs: 1)
Name: scaffold0123
Description:

Target: scaffold0123; HSP #1
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 262 - 315
Target Start/End: Original strand, 44531 - 44584
Alignment:
Q  262 cgacacatataattacactaaattatatgatttactcaaattattagcgatgtc 315  Q
    ||||||||||||||||||| |||||| |||||| |||||||| |||||| ||||    
T  44531 cgacacatataattacactgaattatgtgattttctcaaatttttagcggtgtc 44584  T

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Target: scaffold0024 (Bit Score: 33; Significance: 0.000000005; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 263 - 307
Target Start/End: Original strand, 68249 - 68293
Alignment:
Q  263 gacacatataattacactaaattatatgatttactcaaattatta 307  Q
    ||||| |||||||| ||||||||||||||||| ||||||||||||    
T  68249 gacacctataattatactaaattatatgattttctcaaattatta 68293  T

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Target: scaffold0020 (Bit Score: 32; Significance: 0.00000002; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 262 - 309
Target Start/End: Original strand, 135318 - 135365
Alignment:
Q  262 cgacacatataattacactaaattatatgatttactcaaattattagc 309  Q
    ||||||||||||||||||  |||||| |||||| ||||||||||||||    
T  135318 cgacacatataattacacagaattatgtgattttctcaaattattagc 135365  T

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Target: scaffold0697 (Bit Score: 31; Significance: 0.00000007; HSPs: 1)
Name: scaffold0697
Description:

Target: scaffold0697; HSP #1
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 262 - 316
Target Start/End: Complemental strand, 1697 - 1643
Alignment:
Q  262 cgacacatataattacactaaattatatgatttactcaaattattagcgatgtcg 316  Q
    |||||| |||||||| || |||||||||||||| |||||||||||| || |||||    
T  1697 cgacacttataattataccaaattatatgattttctcaaattattaacggtgtcg 1643  T

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Target: scaffold0036 (Bit Score: 31; Significance: 0.00000007; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 262 - 308
Target Start/End: Original strand, 9753 - 9799
Alignment:
Q  262 cgacacatataattacactaaattatatgatttactcaaattattag 308  Q
    ||||||||||||||||||| |||||  |||||| |||||||||||||    
T  9753 cgacacatataattacactgaattaagtgattttctcaaattattag 9799  T

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Target: scaffold0236 (Bit Score: 30; Significance: 0.0000003; HSPs: 1)
Name: scaffold0236
Description:

Target: scaffold0236; HSP #1
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 262 - 307
Target Start/End: Original strand, 25774 - 25819
Alignment:
Q  262 cgacacatataattacactaaattatatgatttactcaaattatta 307  Q
    |||||| ||||||||||||||||||| |||||| ||| ||||||||    
T  25774 cgacacttataattacactaaattatgtgattttctctaattatta 25819  T

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