View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF3301_low_14 (Length: 253)

Name: NF3301_low_14
Description: NF3301
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF3301_low_14
NF3301_low_14
[»] chr1 (43 HSPs)
chr1 (1-118)||(3233178-3233299)
chr1 (168-237)||(3233348-3233417)
chr1 (5-57)||(27535108-27535160)
chr1 (1-66)||(4882022-4882091)
chr1 (1-66)||(16141018-16141087)
chr1 (1-66)||(28677784-28677853)
chr1 (1-66)||(44517555-44517624)
chr1 (1-44)||(13488207-13488250)
chr1 (1-44)||(33486707-33486750)
chr1 (1-44)||(33938715-33938758)
chr1 (1-57)||(37822017-37822077)
chr1 (5-59)||(25032755-25032813)
chr1 (1-45)||(15390922-15390966)
chr1 (1-66)||(29205675-29205744)
chr1 (5-44)||(10304974-10305013)
chr1 (2-66)||(12872014-12872082)
chr1 (5-44)||(26771496-26771535)
chr1 (7-45)||(29551435-29551473)
chr1 (5-44)||(8893682-8893721)
chr1 (5-44)||(13691448-13691487)
chr1 (5-44)||(13969325-13969364)
chr1 (5-44)||(22031787-22031826)
chr1 (5-57)||(30678650-30678706)
chr1 (5-40)||(32784490-32784525)
chr1 (1-57)||(32879100-32879160)
chr1 (10-58)||(33703177-33703229)
chr1 (5-44)||(34567071-34567110)
chr1 (5-44)||(34659326-34659365)
chr1 (5-44)||(42276766-42276805)
chr1 (5-44)||(42491280-42491319)
chr1 (1-40)||(45193303-45193342)
chr1 (5-43)||(2351011-2351049)
chr1 (11-44)||(900447-900480)
chr1 (11-44)||(11121372-11121405)
chr1 (12-45)||(28666476-28666509)
chr1 (33-66)||(45191998-45192031)
chr1 (11-44)||(46589544-46589577)
chr1 (5-57)||(8743809-8743861)
chr1 (5-66)||(15790921-15790986)
chr1 (5-66)||(18344008-18344073)
chr1 (5-45)||(25689523-25689563)
chr1 (5-41)||(37662742-37662778)
chr1 (5-66)||(51418395-51418460)
[»] chr3 (47 HSPs)
chr3 (5-57)||(51256793-51256845)
chr3 (5-66)||(54238676-54238737)
chr3 (5-66)||(2192489-2192554)
chr3 (1-66)||(11819491-11819560)
chr3 (1-66)||(30155943-30156012)
chr3 (1-57)||(35175115-35175170)
chr3 (1-44)||(4082115-4082158)
chr3 (1-44)||(55090378-55090421)
chr3 (1-59)||(3457329-3457391)
chr3 (5-66)||(13701655-13701720)
chr3 (1-66)||(33637801-33637870)
chr3 (1-45)||(40012950-40012994)
chr3 (1-66)||(48855284-48855353)
chr3 (1-44)||(1074573-1074616)
chr3 (1-44)||(24483375-24483418)
chr3 (1-44)||(38530331-38530374)
chr3 (1-44)||(40883554-40883597)
chr3 (5-44)||(41868012-41868051)
chr3 (1-44)||(45047904-45047947)
chr3 (5-56)||(48053059-48053110)
chr3 (1-44)||(49627783-49627826)
chr3 (5-57)||(53155092-53155148)
chr3 (2-66)||(54706385-54706453)
chr3 (5-43)||(32080443-32080481)
chr3 (1-59)||(36691459-36691521)
chr3 (4-41)||(53403031-53403068)
chr3 (4-44)||(105727-105767)
chr3 (5-66)||(14585873-14585938)
chr3 (5-70)||(19645601-19645670)
chr3 (1-44)||(4206238-4206281)
chr3 (5-44)||(19148386-19148425)
chr3 (5-44)||(31462434-31462473)
chr3 (1-44)||(36623942-36623985)
chr3 (5-57)||(48401503-48401559)
chr3 (1-44)||(48652128-48652171)
chr3 (5-56)||(51742194-51742245)
chr3 (5-57)||(55455273-55455329)
chr3 (6-44)||(31731408-31731446)
chr3 (3-40)||(2598465-2598502)
chr3 (1-59)||(34960589-34960650)
chr3 (5-46)||(40401204-40401245)
chr3 (5-54)||(47733454-47733503)
chr3 (5-45)||(21803921-21803961)
chr3 (5-45)||(28876863-28876903)
chr3 (5-58)||(30293189-30293246)
chr3 (5-45)||(31270720-31270760)
chr3 (5-45)||(46926794-46926834)
[»] chr4 (48 HSPs)
chr4 (1-66)||(51152522-51152590)
chr4 (1-66)||(7060721-7060790)
chr4 (1-66)||(18502487-18502556)
chr4 (1-45)||(27091115-27091159)
chr4 (1-44)||(6882351-6882394)
chr4 (1-57)||(13965950-13966010)
chr4 (1-44)||(24100540-24100583)
chr4 (1-44)||(28837462-28837505)
chr4 (1-44)||(38943828-38943871)
chr4 (1-44)||(45350741-45350784)
chr4 (1-44)||(45360220-45360263)
chr4 (4-45)||(8712918-8712959)
chr4 (4-57)||(26674773-26674826)
chr4 (5-58)||(31444744-31444797)
chr4 (1-66)||(20887402-20887471)
chr4 (5-66)||(42197964-42198029)
chr4 (1-66)||(43244026-43244095)
chr4 (1-44)||(393945-393988)
chr4 (5-44)||(626230-626269)
chr4 (1-44)||(8517130-8517173)
chr4 (5-44)||(20399573-20399612)
chr4 (5-44)||(24568386-24568425)
chr4 (1-57)||(24826046-24826106)
chr4 (1-44)||(31522353-31522396)
chr4 (1-57)||(36124011-36124071)
chr4 (1-44)||(56236502-56236545)
chr4 (8-59)||(12716784-12716839)
chr4 (4-58)||(39523817-39523875)
chr4 (4-44)||(24611469-24611509)
chr4 (5-45)||(46268076-46268116)
chr4 (1-44)||(53648013-53648057)
chr4 (4-44)||(55600217-55600257)
chr4 (5-44)||(3159373-3159412)
chr4 (5-44)||(6912091-6912130)
chr4 (5-57)||(7083475-7083531)
chr4 (1-44)||(11209984-11210027)
chr4 (1-57)||(19745797-19745857)
chr4 (1-57)||(19793949-19794009)
chr4 (5-44)||(29266575-29266614)
chr4 (5-44)||(32616530-32616569)
chr4 (1-57)||(7084347-7084409)
chr4 (11-66)||(14346827-14346886)
chr4 (5-51)||(23926431-23926477)
chr4 (1-34)||(22757491-22757524)
chr4 (6-43)||(24789588-24789625)
chr4 (6-43)||(24818634-24818671)
chr4 (4-57)||(30202448-30202505)
chr4 (5-45)||(41837725-41837765)
[»] chr8 (36 HSPs)
chr8 (3-44)||(10148345-10148386)
chr8 (5-57)||(24210651-24210703)
chr8 (1-44)||(24790849-24790892)
chr8 (1-44)||(28296794-28296837)
chr8 (5-66)||(26046265-26046327)
chr8 (1-66)||(31202855-31202924)
chr8 (5-66)||(41362144-41362209)
chr8 (1-44)||(2024903-2024946)
chr8 (1-44)||(7579534-7579577)
chr8 (5-44)||(9501979-9502018)
chr8 (1-44)||(11162293-11162336)
chr8 (6-44)||(1809917-1809955)
chr8 (1-59)||(13575869-13575931)
chr8 (1-38)||(31308555-31308592)
chr8 (5-58)||(36261345-36261398)
chr8 (5-66)||(2234123-2234188)
chr8 (8-57)||(2968929-2968982)
chr8 (4-44)||(4757558-4757598)
chr8 (5-66)||(13570420-13570485)
chr8 (5-45)||(14600376-14600416)
chr8 (10-45)||(5526218-5526253)
chr8 (5-44)||(8054493-8054532)
chr8 (5-44)||(15665931-15665970)
chr8 (5-44)||(18196831-18196870)
chr8 (1-40)||(32778655-32778694)
chr8 (5-57)||(37613047-37613103)
chr8 (16-55)||(37720240-37720279)
chr8 (5-58)||(7102295-7102348)
chr8 (5-57)||(24700246-24700301)
chr8 (5-59)||(38545476-38545534)
chr8 (5-57)||(10793326-10793378)
chr8 (5-58)||(13977800-13977857)
chr8 (8-44)||(14530601-14530637)
chr8 (5-45)||(30026560-30026600)
chr8 (5-66)||(39067343-39067408)
chr8 (5-45)||(43936858-43936898)
[»] chr7 (47 HSPs)
chr7 (5-75)||(11833429-11833502)
chr7 (1-66)||(36253337-36253406)
chr7 (1-57)||(21991069-21991129)
chr7 (5-44)||(31254802-31254841)
chr7 (1-44)||(45482459-45482502)
chr7 (4-59)||(24319875-24319934)
chr7 (1-66)||(9785724-9785793)
chr7 (5-66)||(41288367-41288432)
chr7 (1-66)||(46025700-46025769)
chr7 (1-57)||(1280791-1280851)
chr7 (1-44)||(4621051-4621094)
chr7 (1-44)||(36719231-36719274)
chr7 (1-44)||(43847380-43847423)
chr7 (1-44)||(48304063-48304106)
chr7 (4-66)||(32741153-32741219)
chr7 (7-44)||(42645068-42645105)
chr7 (5-45)||(5684766-5684806)
chr7 (5-45)||(5709816-5709856)
chr7 (5-66)||(6667806-6667871)
chr7 (5-45)||(14762428-14762468)
chr7 (5-45)||(27535838-27535878)
chr7 (4-57)||(37593493-37593550)
chr7 (4-44)||(45949376-45949416)
chr7 (1-44)||(8180208-8180251)
chr7 (5-44)||(21328983-21329022)
chr7 (5-44)||(21603869-21603908)
chr7 (5-44)||(22747180-22747219)
chr7 (1-44)||(24988171-24988214)
chr7 (5-40)||(28664631-28664666)
chr7 (5-44)||(29804364-29804403)
chr7 (1-57)||(37375710-37375769)
chr7 (5-44)||(39532646-39532685)
chr7 (5-44)||(42603450-42603489)
chr7 (1-44)||(44482549-44482592)
chr7 (1-60)||(21954484-21954547)
chr7 (10-44)||(32312916-32312950)
chr7 (4-66)||(23808736-23808802)
chr7 (5-45)||(5238345-5238385)
chr7 (4-44)||(10574775-10574815)
chr7 (5-45)||(15017123-15017163)
chr7 (4-44)||(17473432-17473472)
chr7 (4-36)||(17508883-17508915)
chr7 (4-36)||(17544299-17544331)
chr7 (4-44)||(17579742-17579782)
chr7 (5-45)||(32083624-32083664)
chr7 (5-57)||(38338842-38338893)
chr7 (1-66)||(40761995-40762064)
[»] chr6 (26 HSPs)
chr6 (1-57)||(23101062-23101121)
chr6 (1-45)||(2488529-2488573)
chr6 (1-45)||(8693341-8693385)
chr6 (1-66)||(23654656-23654725)
chr6 (1-44)||(6419550-6419593)
chr6 (1-44)||(19402523-19402566)
chr6 (1-42)||(14782828-14782869)
chr6 (1-66)||(1106508-1106577)
chr6 (1-66)||(5146333-5146402)
chr6 (1-66)||(12481024-12481093)
chr6 (1-66)||(15589770-15589839)
chr6 (5-66)||(30813468-30813533)
chr6 (5-66)||(31705576-31705641)
chr6 (1-66)||(35219558-35219627)
chr6 (1-44)||(4394177-4394220)
chr6 (1-57)||(4660835-4660895)
chr6 (5-44)||(6295920-6295959)
chr6 (5-44)||(6302730-6302769)
chr6 (1-44)||(12653989-12654032)
chr6 (5-58)||(8693949-8694002)
chr6 (4-57)||(4085086-4085143)
chr6 (1-66)||(21507499-21507568)
chr6 (5-44)||(8644618-8644657)
chr6 (6-55)||(4921564-4921617)
chr6 (5-45)||(31748347-31748387)
chr6 (8-57)||(31936287-31936340)
[»] chr5 (36 HSPs)
chr5 (1-67)||(6681521-6681591)
chr5 (1-66)||(17331735-17331804)
chr5 (1-44)||(2555021-2555064)
chr5 (1-44)||(23881787-23881830)
chr5 (1-57)||(34431471-34431531)
chr5 (1-42)||(17732060-17732101)
chr5 (1-59)||(42396162-42396224)
chr5 (1-66)||(39179490-39179559)
chr5 (1-44)||(177775-177818)
chr5 (5-44)||(17095912-17095951)
chr5 (5-44)||(17325349-17325388)
chr5 (1-57)||(17699960-17700020)
chr5 (1-44)||(28041036-28041079)
chr5 (5-56)||(39591438-39591489)
chr5 (5-55)||(32755498-32755547)
chr5 (4-45)||(7771491-7771532)
chr5 (1-42)||(29098187-29098228)
chr5 (5-66)||(6281455-6281520)
chr5 (5-66)||(11734490-11734555)
chr5 (5-45)||(17566140-17566180)
chr5 (4-44)||(26294745-26294785)
chr5 (5-57)||(31254929-31254981)
chr5 (5-57)||(6635659-6635715)
chr5 (5-44)||(9034630-9034669)
chr5 (5-44)||(17218113-17218152)
chr5 (1-44)||(18654189-18654232)
chr5 (1-57)||(20483593-20483653)
chr5 (1-44)||(39531079-39531122)
chr5 (5-44)||(40564842-40564881)
chr5 (5-44)||(42505084-42505123)
chr5 (11-57)||(8811824-8811870)
chr5 (11-44)||(28501085-28501118)
chr5 (5-42)||(29663048-29663085)
chr5 (11-44)||(40775157-40775190)
chr5 (5-66)||(33164114-33164179)
chr5 (5-66)||(42781412-42781477)
[»] scaffold0155 (1 HSPs)
scaffold0155 (1-66)||(35482-35551)
[»] chr2 (48 HSPs)
chr2 (1-66)||(12890762-12890831)
chr2 (1-66)||(25068248-25068317)
chr2 (1-66)||(34416408-34416477)
chr2 (1-44)||(4739736-4739779)
chr2 (1-44)||(12705093-12705136)
chr2 (1-44)||(20560804-20560847)
chr2 (1-44)||(28261576-28261619)
chr2 (1-57)||(35333912-35333972)
chr2 (4-66)||(3527396-3527462)
chr2 (4-66)||(13878654-13878720)
chr2 (4-66)||(14018779-14018845)
chr2 (1-66)||(17267771-17267840)
chr2 (4-44)||(44942696-44942736)
chr2 (1-44)||(4603987-4604030)
chr2 (1-44)||(7071446-7071489)
chr2 (5-44)||(15920264-15920303)
chr2 (1-44)||(18089083-18089126)
chr2 (5-57)||(29543204-29543260)
chr2 (1-44)||(32015660-32015703)
chr2 (5-57)||(33012459-33012515)
chr2 (3-66)||(34471365-34471432)
chr2 (4-66)||(16136488-16136554)
chr2 (4-66)||(43696278-43696344)
chr2 (5-66)||(4703542-4703607)
chr2 (1-54)||(4732469-4732526)
chr2 (1-45)||(10286684-10286728)
chr2 (5-57)||(11580803-11580855)
chr2 (5-45)||(15439883-15439923)
chr2 (1-44)||(4426330-4426373)
chr2 (5-44)||(5071055-5071094)
chr2 (5-44)||(5754693-5754732)
chr2 (1-44)||(9978349-9978392)
chr2 (5-57)||(11937520-11937576)
chr2 (5-44)||(27666578-27666617)
chr2 (5-57)||(28230751-28230807)
chr2 (1-44)||(31908488-31908531)
chr2 (1-44)||(34962666-34962709)
chr2 (5-44)||(35354030-35354069)
chr2 (5-44)||(44589283-44589322)
chr2 (1-43)||(13740326-13740368)
chr2 (6-44)||(32314837-32314875)
chr2 (11-44)||(12366264-12366297)
chr2 (11-44)||(26491697-26491730)
chr2 (5-54)||(11798195-11798248)
chr2 (5-45)||(27023823-27023863)
chr2 (5-66)||(27096100-27096165)
chr2 (5-66)||(38384111-38384176)
chr2 (4-44)||(38534976-38535015)
[»] scaffold0294 (1 HSPs)
scaffold0294 (1-44)||(3738-3781)
[»] scaffold0056 (1 HSPs)
scaffold0056 (1-66)||(74571-74640)
[»] scaffold0536 (1 HSPs)
scaffold0536 (5-71)||(3306-3376)
[»] scaffold0432 (1 HSPs)
scaffold0432 (5-44)||(2119-2158)
[»] scaffold0288 (1 HSPs)
scaffold0288 (1-57)||(21000-21060)
[»] scaffold0001 (1 HSPs)
scaffold0001 (5-44)||(403919-403958)
[»] scaffold0321 (1 HSPs)
scaffold0321 (5-39)||(6806-6840)


Alignment Details
Target: chr1 (Bit Score: 97; Significance: 9e-48; HSPs: 43)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 1 - 118
Target Start/End: Original strand, 3233178 - 3233299
Alignment:
Q  1 ttggatttgtattgtatcgatgtaatctatcaatttgaa----tgaatatcgtttatttttatcgaaaaagaaagttatctttattatattaaccaaacc 96  Q
    |||||||| ||||||||||||||||||||||||||||||    ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  3233178 ttggatttatattgtatcgatgtaatctatcaatttgaatgaatgaatatcgtttatttttatccaaaaagaaagttatctttattatattaaccaaacc 3233277  T
Q  97 cattgttttaatttactttgac 118  Q
    ||||||||||||||||||||||    
T  3233278 cattgttttaatttactttgac 3233299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 168 - 237
Target Start/End: Original strand, 3233348 - 3233417
Alignment:
Q  168 gattaagatacgaagtacggacaaagagacagagattgcgttagagagagaaacctcggatccaaattgt 237  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3233348 gattaagatacgaagtacggacaaagagacagagattgcgttagagagagaaacctcggatccaaattgt 3233417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 5 - 57
Target Start/End: Original strand, 27535108 - 27535160
Alignment:
Q  5 atttgtattgtatcgatgtaatctatcaatttgaatgaatatcgtttattttt 57  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  27535108 atttgtattgtatcgatgtactctatcaatttgaatgaatatcgtttattttt 27535160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 4882091 - 4882022
Alignment:
Q  1 ttggatttgtattgtatcgatgtaatctatcaatttgaat----gaatatcgtttatttttatcgaaaaa 66  Q
    |||||||||||||||||||||||| |||||||||||||||    ||||||||||||||||| || |||||    
T  4882091 ttggatttgtattgtatcgatgtactctatcaatttgaatgaatgaatatcgtttatttttgtcaaaaaa 4882022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 16141018 - 16141087
Alignment:
Q  1 ttggatttgtattgtatcgatgtaatctatcaatt----tgaatgaatatcgtttatttttatcgaaaaa 66  Q
    |||||||||||||||||||||||| ||||||||||    |||||||||||||||||||||| || |||||    
T  16141018 ttggatttgtattgtatcgatgtactctatcaatttggatgaatgaatatcgtttatttttgtcaaaaaa 16141087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 28677853 - 28677784
Alignment:
Q  1 ttggatttgtattgtatcgatgtaatctatcaatttg----aatgaatatcgtttatttttatcgaaaaa 66  Q
    |||||||||||||||||||||||| ||||||||||||    |||||||||||||||||||| || |||||    
T  28677853 ttggatttgtattgtatcgatgtactctatcaatttgaataaatgaatatcgtttatttttgtcaaaaaa 28677784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 44517555 - 44517624
Alignment:
Q  1 ttggatttgtattgtatcgatgtaatctatcaatt----tgaatgaatatcgtttatttttatcgaaaaa 66  Q
    |||||||||||||||||||||||| ||||||||||    |||||||||||||||||||||| || |||||    
T  44517555 ttggatttgtattgtatcgatgtactctatcaatttgaatgaatgaatatcgtttatttttgtcaaaaaa 44517624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 13488250 - 13488207
Alignment:
Q  1 ttggatttgtattgtatcgatgtaatctatcaatttgaatgaat 44  Q
    |||||||||||||||||||||||| |||||||||||||||||||    
T  13488250 ttggatttgtattgtatcgatgtactctatcaatttgaatgaat 13488207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 33486750 - 33486707
Alignment:
Q  1 ttggatttgtattgtatcgatgtaatctatcaatttgaatgaat 44  Q
    |||||||||||||||||||||||| |||||||||||||||||||    
T  33486750 ttggatttgtattgtatcgatgtactctatcaatttgaatgaat 33486707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 33938758 - 33938715
Alignment:
Q  1 ttggatttgtattgtatcgatgtaatctatcaatttgaatgaat 44  Q
    |||||||||||||||||||||||| |||||||||||||||||||    
T  33938758 ttggatttgtattgtatcgatgtactctatcaatttgaatgaat 33938715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 37822077 - 37822017
Alignment:
Q  1 ttggatttgtattgtatcgatgtaatctatcaatt----tgaatgaatatcgtttattttt 57  Q
    |||||||||||||||||||||||| ||||||||||    ||||||||||||||||||||||    
T  37822077 ttggatttgtattgtatcgatgtactctatcaatttgagtgaatgaatatcgtttattttt 37822017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 5 - 59
Target Start/End: Complemental strand, 25032813 - 25032755
Alignment:
Q  5 atttgtattgtatcgatgtaatctatcaatttgaat----gaatatcgtttatttttat 59  Q
    |||||||||||||||||||| |||||||||||||||    |||||||||||||||||||    
T  25032813 atttgtattgtatcgatgtactctatcaatttgaatgaatgaatatcgtttatttttat 25032755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 15390966 - 15390922
Alignment:
Q  1 ttggatttgtattgtatcgatgtaatctatcaatttgaatgaata 45  Q
    |||||||||||||||||||||||| |||||||| |||||||||||    
T  15390966 ttggatttgtattgtatcgatgtactctatcaagttgaatgaata 15390922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 29205675 - 29205744
Alignment:
Q  1 ttggatttgtattgtatcgatgtaatctatcaatt----tgaatgaatatcgtttatttttatcgaaaaa 66  Q
    |||||||| ||||||||||||||| ||||||||||    |||||||||||||||||||||| || |||||    
T  29205675 ttggatttttattgtatcgatgtactctatcaatttgaatgaatgaatatcgtttatttttgtcaaaaaa 29205744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 5 - 44
Target Start/End: Original strand, 10304974 - 10305013
Alignment:
Q  5 atttgtattgtatcgatgtaatctatcaatttgaatgaat 44  Q
    |||| |||||||||||||||||||||||||||||||||||    
T  10304974 atttatattgtatcgatgtaatctatcaatttgaatgaat 10305013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 2 - 66
Target Start/End: Original strand, 12872014 - 12872082
Alignment:
Q  2 tggatttgtattgtatcgatgtaatctatcaatt----tgaatgaatatcgtttatttttatcgaaaaa 66  Q
    ||||||||||||||||| ||||| ||||||||||    |||||||||||||||||||||| || |||||    
T  12872014 tggatttgtattgtatcaatgtactctatcaatttgaatgaatgaatatcgtttatttttgtcaaaaaa 12872082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 5 - 44
Target Start/End: Original strand, 26771496 - 26771535
Alignment:
Q  5 atttgtattgtatcgatgtaatctatcaatttgaatgaat 44  Q
    |||||||||||||||||||| |||||||||||||||||||    
T  26771496 atttgtattgtatcgatgtactctatcaatttgaatgaat 26771535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 7 - 45
Target Start/End: Complemental strand, 29551473 - 29551435
Alignment:
Q  7 ttgtattgtatcgatgtaatctatcaatttgaatgaata 45  Q
    |||||||||||||||||||||||||||||| ||||||||    
T  29551473 ttgtattgtatcgatgtaatctatcaatttaaatgaata 29551435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 5 - 44
Target Start/End: Original strand, 8893682 - 8893721
Alignment:
Q  5 atttgtattgtatcgatgtaatctatcaatttgaatgaat 44  Q
    ||||| |||||||||||||| |||||||||||||||||||    
T  8893682 atttgcattgtatcgatgtactctatcaatttgaatgaat 8893721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 5 - 44
Target Start/End: Complemental strand, 13691487 - 13691448
Alignment:
Q  5 atttgtattgtatcgatgtaatctatcaatttgaatgaat 44  Q
    |||||||||| ||||||||| |||||||||||||||||||    
T  13691487 atttgtattgcatcgatgtactctatcaatttgaatgaat 13691448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 5 - 44
Target Start/End: Complemental strand, 13969364 - 13969325
Alignment:
Q  5 atttgtattgtatcgatgtaatctatcaatttgaatgaat 44  Q
    ||||| |||||||||||||| |||||||||||||||||||    
T  13969364 atttgcattgtatcgatgtattctatcaatttgaatgaat 13969325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 5 - 44
Target Start/End: Complemental strand, 22031826 - 22031787
Alignment:
Q  5 atttgtattgtatcgatgtaatctatcaatttgaatgaat 44  Q
    ||||||||||||| |||||| |||||||||||||||||||    
T  22031826 atttgtattgtattgatgtactctatcaatttgaatgaat 22031787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 5 - 57
Target Start/End: Original strand, 30678650 - 30678706
Alignment:
Q  5 atttgtattgtatcgatgtaatctatcaattt----gaatgaatatcgtttattttt 57  Q
    ||||||||||||||||| || |||||||||||    |||||||||||||||||||||    
T  30678650 atttgtattgtatcgatatattctatcaatttgatggaatgaatatcgtttattttt 30678706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 5 - 40
Target Start/End: Original strand, 32784490 - 32784525
Alignment:
Q  5 atttgtattgtatcgatgtaatctatcaatttgaat 40  Q
    |||||||||||||||||||| |||||||||||||||    
T  32784490 atttgtattgtatcgatgtactctatcaatttgaat 32784525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 32879100 - 32879160
Alignment:
Q  1 ttggatttgtattgtatcgatgtaatctatcaatttgaatgaat----atcgtttattttt 57  Q
    |||||||||||||||||||||||| |  ||||||||||||||||    |||||||||||||    
T  32879100 ttggatttgtattgtatcgatgtactaaatcaatttgaatgaatgattatcgtttattttt 32879160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 10 - 58
Target Start/End: Complemental strand, 33703229 - 33703177
Alignment:
Q  10 tattgtatcgatgtaatctatcaattt----gaatgaatatcgtttattttta 58  Q
    ||||||||||||||| |||||||||||    ||||||||||||||||||||||    
T  33703229 tattgtatcgatgtactctatcaatttaaacgaatgaatatcgtttattttta 33703177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 5 - 44
Target Start/End: Original strand, 34567071 - 34567110
Alignment:
Q  5 atttgtattgtatcgatgtaatctatcaatttgaatgaat 44  Q
    |||||||||| ||||||||| |||||||||||||||||||    
T  34567071 atttgtattgcatcgatgtactctatcaatttgaatgaat 34567110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 5 - 44
Target Start/End: Complemental strand, 34659365 - 34659326
Alignment:
Q  5 atttgtattgtatcgatgtaatctatcaatttgaatgaat 44  Q
    ||||| |||||||||||||| |||||||||||||||||||    
T  34659365 atttgcattgtatcgatgtactctatcaatttgaatgaat 34659326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 5 - 44
Target Start/End: Original strand, 42276766 - 42276805
Alignment:
Q  5 atttgtattgtatcgatgtaatctatcaatttgaatgaat 44  Q
    |||||||||||||||||||| |||||||||||||| ||||    
T  42276766 atttgtattgtatcgatgtactctatcaatttgaaagaat 42276805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 5 - 44
Target Start/End: Original strand, 42491280 - 42491319
Alignment:
Q  5 atttgtattgtatcgatgtaatctatcaatttgaatgaat 44  Q
    |||| ||||||||||||||| |||||||||||||||||||    
T  42491280 atttatattgtatcgatgtactctatcaatttgaatgaat 42491319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 45193342 - 45193303
Alignment:
Q  1 ttggatttgtattgtatcgatgtaatctatcaatttgaat 40  Q
    |||||||||||||||||||||||| | |||||||||||||    
T  45193342 ttggatttgtattgtatcgatgtactttatcaatttgaat 45193303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 5 - 43
Target Start/End: Original strand, 2351011 - 2351049
Alignment:
Q  5 atttgtattgtatcgatgtaatctatcaatttgaatgaa 43  Q
    |||||||||| ||||||||| ||||||||||||||||||    
T  2351011 atttgtattgcatcgatgtactctatcaatttgaatgaa 2351049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 11 - 44
Target Start/End: Original strand, 900447 - 900480
Alignment:
Q  11 attgtatcgatgtaatctatcaatttgaatgaat 44  Q
    |||||||||||||| |||||||||||||||||||    
T  900447 attgtatcgatgtactctatcaatttgaatgaat 900480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 11 - 44
Target Start/End: Original strand, 11121372 - 11121405
Alignment:
Q  11 attgtatcgatgtaatctatcaatttgaatgaat 44  Q
    |||||||||||||| |||||||||||||||||||    
T  11121372 attgtatcgatgtattctatcaatttgaatgaat 11121405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 12 - 45
Target Start/End: Original strand, 28666476 - 28666509
Alignment:
Q  12 ttgtatcgatgtaatctatcaatttgaatgaata 45  Q
    ||||||||||||| ||||||||||||||||||||    
T  28666476 ttgtatcgatgtactctatcaatttgaatgaata 28666509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 33 - 66
Target Start/End: Complemental strand, 45192031 - 45191998
Alignment:
Q  33 atttgaatgaatatcgtttatttttatcgaaaaa 66  Q
    |||||||||||||||||||||||||||| |||||    
T  45192031 atttgaatgaatatcgtttatttttatcaaaaaa 45191998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 11 - 44
Target Start/End: Original strand, 46589544 - 46589577
Alignment:
Q  11 attgtatcgatgtaatctatcaatttgaatgaat 44  Q
    |||||||||||||| |||||||||||||||||||    
T  46589544 attgtatcgatgtactctatcaatttgaatgaat 46589577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 57
Target Start/End: Complemental strand, 8743861 - 8743809
Alignment:
Q  5 atttgtattgtatcgatgtaatctatcaatttgaatgaatatcgtttattttt 57  Q
    ||||||||| ||  |||||| | ||||||||| ||||||||||||||||||||    
T  8743861 atttgtattatactgatgtattgtatcaatttaaatgaatatcgtttattttt 8743809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 66
Target Start/End: Complemental strand, 15790986 - 15790921
Alignment:
Q  5 atttgtattgtatcgatgtaatctatcaatttg----aatgaatatcgtttatttttatcgaaaaa 66  Q
    |||||||||||||||||||| | ||||||||||    |||||||||| ||||||||| || |||||    
T  15790986 atttgtattgtatcgatgtactttatcaatttgaataaatgaatatcttttatttttgtcaaaaaa 15790921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 66
Target Start/End: Original strand, 18344008 - 18344073
Alignment:
Q  5 atttgtattgtatcgatgtaatctatcaatttgaatgaata----tcgtttatttttatcgaaaaa 66  Q
    ||||||||||||||||| || ||||||||||||||| ||||    |||||||||||| || |||||    
T  18344008 atttgtattgtatcgatatactctatcaatttgaataaataaatatcgtttatttttgtcaaaaaa 18344073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 45
Target Start/End: Complemental strand, 25689563 - 25689523
Alignment:
Q  5 atttgtattgtatcgatgtaatctatcaatttgaatgaata 45  Q
    |||||||||||||| || || ||||||||||||||||||||    
T  25689563 atttgtattgtatcaatatactctatcaatttgaatgaata 25689523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 41
Target Start/End: Original strand, 37662742 - 37662778
Alignment:
Q  5 atttgtattgtatcgatgtaatctatcaatttgaatg 41  Q
    |||||||||| ||||||||| ||||||||||||||||    
T  37662742 atttgtattgcatcgatgtactctatcaatttgaatg 37662778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 66
Target Start/End: Original strand, 51418395 - 51418460
Alignment:
Q  5 atttgtattgtatcgatgtaatctatcaatt----tgaatgaatatcgtttatttttatcgaaaaa 66  Q
    ||||||||| |||||||||| ||||||||||    ||||||||||||||||| |||| || |||||    
T  51418395 atttgtattatatcgatgtactctatcaatttaaatgaatgaatatcgtttacttttgtcaaaaaa 51418460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 45; Significance: 1e-16; HSPs: 47)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 5 - 57
Target Start/End: Original strand, 51256793 - 51256845
Alignment:
Q  5 atttgtattgtatcgatgtaatctatcaatttgaatgaatatcgtttattttt 57  Q
    ||||||||||||||||| || ||||||||||||||||||||||||||||||||    
T  51256793 atttgtattgtatcgatatactctatcaatttgaatgaatatcgtttattttt 51256845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 5 - 66
Target Start/End: Complemental strand, 54238737 - 54238676
Alignment:
Q  5 atttgtattgtatcgatgtaatctatcaatttgaatgaatatcgtttatttttatcgaaaaa 66  Q
    |||||||||||||| ||||| | |||||||||||||||||||||||||||||| || |||||    
T  54238737 atttgtattgtatcaatgtactttatcaatttgaatgaatatcgtttatttttgtcaaaaaa 54238676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 5 - 66
Target Start/End: Original strand, 2192489 - 2192554
Alignment:
Q  5 atttgtattgtatcgatgtaatctatcaatt----tgaatgaatatcgtttatttttatcgaaaaa 66  Q
    |||||||||||||||||||| ||||||||||    ||||||||||||||||||||||||| |||||    
T  2192489 atttgtattgtatcgatgtactctatcaatttgaatgaatgaatatcgtttatttttatcaaaaaa 2192554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 11819491 - 11819560
Alignment:
Q  1 ttggatttgtattgtatcgatgtaatctatcaatt----tgaatgaatatcgtttatttttatcgaaaaa 66  Q
    |||||||||||||||||||||||| ||||||||||    |||||||||||||||||||||| || |||||    
T  11819491 ttggatttgtattgtatcgatgtactctatcaatttgaatgaatgaatatcgtttatttttgtcaaaaaa 11819560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 30156012 - 30155943
Alignment:
Q  1 ttggatttgtattgtatcgatgtaatctatcaatttgaatgaa----tatcgtttatttttatcgaaaaa 66  Q
    |||||||||||||||||||||||| ||||||||||||||||||    |||||||||||||| || |||||    
T  30156012 ttggatttgtattgtatcgatgtactctatcaatttgaatgaatgagtatcgtttatttttgtcaaaaaa 30155943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 35175115 - 35175170
Alignment:
Q  1 ttggatttgtattgtatcgatgtaatctatcaatttgaatgaatatcgtttattttt 57  Q
    |||||||||||||||||||| ||| | ||||||||||||||||||||||||||||||    
T  35175115 ttggatttgtattgtatcga-gtactatatcaatttgaatgaatatcgtttattttt 35175170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 4082115 - 4082158
Alignment:
Q  1 ttggatttgtattgtatcgatgtaatctatcaatttgaatgaat 44  Q
    |||||||||||||||||||||||| |||||||||||||||||||    
T  4082115 ttggatttgtattgtatcgatgtactctatcaatttgaatgaat 4082158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 55090421 - 55090378
Alignment:
Q  1 ttggatttgtattgtatcgatgtaatctatcaatttgaatgaat 44  Q
    |||||||||||||||||||||||| |||||||||||||||||||    
T  55090421 ttggatttgtattgtatcgatgtactctatcaatttgaatgaat 55090378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 3457329 - 3457391
Alignment:
Q  1 ttggatttgtattgtatcgatgtaatctatcaatt----tgaatgaatatcgtttatttttat 59  Q
    |||||||||||||||||| ||||| ||||||||||    ||||||||||||||||||||||||    
T  3457329 ttggatttgtattgtatcaatgtactctatcaatttaaatgaatgaatatcgtttatttttat 3457391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 5 - 66
Target Start/End: Complemental strand, 13701720 - 13701655
Alignment:
Q  5 atttgtattgtatcgatgtaatctatcaatttgaat----gaatatcgtttatttttatcgaaaaa 66  Q
    |||||||||||||||||||| |||||||||||||||    ||||||||||||||||| || |||||    
T  13701720 atttgtattgtatcgatgtactctatcaatttgaatgaatgaatatcgtttatttttgtcaaaaaa 13701655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 33637801 - 33637870
Alignment:
Q  1 ttggatttgtattgtatcgatgtaatctatcaatt----tgaatgaatatcgtttatttttatcgaaaaa 66  Q
    |||||||||||||||||||||||| | ||||||||    |||||||||||||||||||||| || |||||    
T  33637801 ttggatttgtattgtatcgatgtactttatcaatttgaatgaatgaatatcgtttatttttgtcaaaaaa 33637870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 40012994 - 40012950
Alignment:
Q  1 ttggatttgtattgtatcgatgtaatctatcaatttgaatgaata 45  Q
    ||||||||||||||||||||| || ||||||||||||||||||||    
T  40012994 ttggatttgtattgtatcgatatactctatcaatttgaatgaata 40012950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 48855284 - 48855353
Alignment:
Q  1 ttggatttgtattgtatcgatgtaatctatcaatttgaatg----aatatcgtttatttttatcgaaaaa 66  Q
    ||||||||||||||| |||||||| ||||||||||||||||    |||||||||||||||| || |||||    
T  48855284 ttggatttgtattgtttcgatgtactctatcaatttgaatgaattaatatcgtttatttttgtcaaaaaa 48855353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 1074616 - 1074573
Alignment:
Q  1 ttggatttgtattgtatcgatgtaatctatcaatttgaatgaat 44  Q
    ||||||||||||| |||||||||| |||||||||||||||||||    
T  1074616 ttggatttgtattatatcgatgtactctatcaatttgaatgaat 1074573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 24483418 - 24483375
Alignment:
Q  1 ttggatttgtattgtatcgatgtaatctatcaatttgaatgaat 44  Q
    ||||||||||||| |||||||||| |||||||||||||||||||    
T  24483418 ttggatttgtattctatcgatgtactctatcaatttgaatgaat 24483375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 38530331 - 38530374
Alignment:
Q  1 ttggatttgtattgtatcgatgtaatctatcaatttgaatgaat 44  Q
    |||| ||||||||||||||||||| |||||||||||||||||||    
T  38530331 ttgggtttgtattgtatcgatgtactctatcaatttgaatgaat 38530374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 40883597 - 40883554
Alignment:
Q  1 ttggatttgtattgtatcgatgtaatctatcaatttgaatgaat 44  Q
    |||||||||||||||||| ||||| |||||||||||||||||||    
T  40883597 ttggatttgtattgtatcaatgtactctatcaatttgaatgaat 40883554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 5 - 44
Target Start/End: Complemental strand, 41868051 - 41868012
Alignment:
Q  5 atttgtattgtatcgatgtaatctatcaatttgaatgaat 44  Q
    |||||||||||||||||||| |||||||||||||||||||    
T  41868051 atttgtattgtatcgatgtactctatcaatttgaatgaat 41868012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 45047904 - 45047947
Alignment:
Q  1 ttggatttgtattgtatcgatgtaatctatcaatttgaatgaat 44  Q
    ||||||||||||||||||||| || |||||||||||||||||||    
T  45047904 ttggatttgtattgtatcgatatactctatcaatttgaatgaat 45047947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 5 - 56
Target Start/End: Complemental strand, 48053110 - 48053059
Alignment:
Q  5 atttgtattgtatcgatgtaatctatcaatttgaatgaatatcgtttatttt 56  Q
    ||||| |||| |||||| || |||||||||||||||||||||||||||||||    
T  48053110 atttgcattgcatcgatatactctatcaatttgaatgaatatcgtttatttt 48053059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 49627826 - 49627783
Alignment:
Q  1 ttggatttgtattgtatcgatgtaatctatcaatttgaatgaat 44  Q
    |||||||| ||||||||||||||| |||||||||||||||||||    
T  49627826 ttggatttatattgtatcgatgtactctatcaatttgaatgaat 49627783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 5 - 57
Target Start/End: Complemental strand, 53155148 - 53155092
Alignment:
Q  5 atttgtattgtatcgatgtaatctatcaatt----tgaatgaatatcgtttattttt 57  Q
    |||||||||||||||||||| ||||||||||    ||||||||||||||||||||||    
T  53155148 atttgtattgtatcgatgtactctatcaatttaaatgaatgaatatcgtttattttt 53155092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 2 - 66
Target Start/End: Complemental strand, 54706453 - 54706385
Alignment:
Q  2 tggatttgtattgtatcgatgtaatctatcaatttgaat----gaatatcgtttatttttatcgaaaaa 66  Q
    ||||||||||||||| ||||||| |||||||||||||||    ||||||||||||||||| || |||||    
T  54706453 tggatttgtattgtaacgatgtactctatcaatttgaatgaatgaatatcgtttatttttttcaaaaaa 54706385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 5 - 43
Target Start/End: Complemental strand, 32080481 - 32080443
Alignment:
Q  5 atttgtattgtatcgatgtaatctatcaatttgaatgaa 43  Q
    |||||||||||||||||||| ||||||||||||||||||    
T  32080481 atttgtattgtatcgatgtactctatcaatttgaatgaa 32080443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 36691521 - 36691459
Alignment:
Q  1 ttggatttgtattgtatcgatgtaatctatcaatttgaat----gaatatcgtttatttttat 59  Q
    |||||||||||||||||||||||| | |||| ||||||||    |||||||||||||||||||    
T  36691521 ttggatttgtattgtatcgatgtactttatcgatttgaatgaatgaatatcgtttatttttat 36691459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 4 - 41
Target Start/End: Original strand, 53403031 - 53403068
Alignment:
Q  4 gatttgtattgtatcgatgtaatctatcaatttgaatg 41  Q
    ||||||||||||||||||||| ||||||||||||||||    
T  53403031 gatttgtattgtatcgatgtactctatcaatttgaatg 53403068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 4 - 44
Target Start/End: Complemental strand, 105767 - 105727
Alignment:
Q  4 gatttgtattgtatcgatgtaatctatcaatttgaatgaat 44  Q
    ||||||||||||||| ||||| |||||||||||||||||||    
T  105767 gatttgtattgtatcaatgtactctatcaatttgaatgaat 105727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 5 - 66
Target Start/End: Original strand, 14585873 - 14585938
Alignment:
Q  5 atttgtattgtatcgatgtaatctatcaatt----tgaatgaatatcgtttatttttatcgaaaaa 66  Q
    ||||||||||||| |||||| ||||||||||    |||||||||||||||||||||| || |||||    
T  14585873 atttgtattgtattgatgtactctatcaatttgaatgaatgaatatcgtttatttttgtcaaaaaa 14585938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 5 - 70
Target Start/End: Original strand, 19645601 - 19645670
Alignment:
Q  5 atttgtattgtatcgatgtaatctatcaatt----tgaatgaatatcgtttatttttatcgaaaaagaaa 70  Q
    ||||| ||||||| |||||| ||||||||||    |||||||||||||||||||||| || |||||||||    
T  19645601 atttgaattgtattgatgtactctatcaatttgaatgaatgaatatcgtttatttttgtcaaaaaagaaa 19645670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 4206281 - 4206238
Alignment:
Q  1 ttggatttgtattgtatcgatgtaatctatcaatttgaatgaat 44  Q
    |||||||| |||||||||||| || |||||||||||||||||||    
T  4206281 ttggatttatattgtatcgatatactctatcaatttgaatgaat 4206238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 5 - 44
Target Start/End: Original strand, 19148386 - 19148425
Alignment:
Q  5 atttgtattgtatcgatgtaatctatcaatttgaatgaat 44  Q
    ||||||||||||||||||||  ||||||||||||||||||    
T  19148386 atttgtattgtatcgatgtacactatcaatttgaatgaat 19148425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 5 - 44
Target Start/End: Complemental strand, 31462473 - 31462434
Alignment:
Q  5 atttgtattgtatcgatgtaatctatcaatttgaatgaat 44  Q
    |||||||||||||||||||| | |||||||||||||||||    
T  31462473 atttgtattgtatcgatgtactttatcaatttgaatgaat 31462434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 36623985 - 36623942
Alignment:
Q  1 ttggatttgtattgtatcgatgtaatctatcaatttgaatgaat 44  Q
    |||||||| ||||||| ||||||| |||||||||||||||||||    
T  36623985 ttggatttatattgtaccgatgtactctatcaatttgaatgaat 36623942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 5 - 57
Target Start/End: Original strand, 48401503 - 48401559
Alignment:
Q  5 atttgtattgtatcgatgtaatctatcaatttgaa----tgaatatcgtttattttt 57  Q
    |||| ||||||||||||||| ||||||||||||||    ||||||||||||||||||    
T  48401503 atttatattgtatcgatgtactctatcaatttgaatgaatgaatatcgtttattttt 48401559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 48652171 - 48652128
Alignment:
Q  1 ttggatttgtattgtatcgatgtaatctatcaatttgaatgaat 44  Q
    ||||| |||||||||||||||||| | |||||||||||||||||    
T  48652171 ttggagttgtattgtatcgatgtactttatcaatttgaatgaat 48652128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 5 - 56
Target Start/End: Original strand, 51742194 - 51742245
Alignment:
Q  5 atttgtattgtatcgatgtaatctatcaatttgaatgaatatcgtttatttt 56  Q
    |||||||||||||| || || |||||||||||||||||||||| || |||||    
T  51742194 atttgtattgtatcaatatactctatcaatttgaatgaatatcattaatttt 51742245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 5 - 57
Target Start/End: Original strand, 55455273 - 55455329
Alignment:
Q  5 atttgtattgtatcgatgtaatctatcaatttgaa----tgaatatcgtttattttt 57  Q
    |||||||||||||| ||||| ||||||||||||||    ||||||||||||||||||    
T  55455273 atttgtattgtatcaatgtactctatcaatttgaatgaatgaatatcgtttattttt 55455329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 6 - 44
Target Start/End: Original strand, 31731408 - 31731446
Alignment:
Q  6 tttgtattgtatcgatgtaatctatcaatttgaatgaat 44  Q
    |||||||||||| |||||| |||||||||||||||||||    
T  31731408 tttgtattgtattgatgtactctatcaatttgaatgaat 31731446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 3 - 40
Target Start/End: Original strand, 2598465 - 2598502
Alignment:
Q  3 ggatttgtattgtatcgatgtaatctatcaatttgaat 40  Q
    |||||||||||||||||||||| | |||||||||||||    
T  2598465 ggatttgtattgtatcgatgtactatatcaatttgaat 2598502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 34960650 - 34960589
Alignment:
Q  1 ttggatttgtattgtatcgatgtaatctatcaatttgaatgaat----atcgtttatttttat 59  Q
    |||||||| ||||||||||||||  |||||||||||||||||||    |||||||||||||||    
T  34960650 ttggatttatattgtatcgatgtg-tctatcaatttgaatgaatgaatatcgtttatttttat 34960589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 5 - 46
Target Start/End: Complemental strand, 40401245 - 40401204
Alignment:
Q  5 atttgtattgtatcgatgtaatctatcaatttgaatgaatat 46  Q
    ||||| |||||||||||||| | |||||||||||||||||||    
T  40401245 atttgcattgtatcgatgtactatatcaatttgaatgaatat 40401204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 5 - 54
Target Start/End: Original strand, 47733454 - 47733503
Alignment:
Q  5 atttgtattgtatcgatgtaatctatcaatttgaatgaatatcgtttatt 54  Q
    |||| ||||||||| ||||| ||| |||||||||||||||||| ||||||    
T  47733454 atttatattgtatcaatgtactctgtcaatttgaatgaatatcatttatt 47733503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 45
Target Start/End: Original strand, 21803921 - 21803961
Alignment:
Q  5 atttgtattgtatcgatgtaatctatcaatttgaatgaata 45  Q
    ||||| ||| |||||||||| ||||||||||||||||||||    
T  21803921 atttgcattatatcgatgtactctatcaatttgaatgaata 21803961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 45
Target Start/End: Original strand, 28876863 - 28876903
Alignment:
Q  5 atttgtattgtatcgatgtaatctatcaatttgaatgaata 45  Q
    ||||||||||||| ||| || ||||||||||||||||||||    
T  28876863 atttgtattgtattgatatactctatcaatttgaatgaata 28876903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 58
Target Start/End: Original strand, 30293189 - 30293246
Alignment:
Q  5 atttgtattgtatcgatgtaatctatcaat----ttgaatgaatatcgtttattttta 58  Q
    |||||||||||||| || || |||||||||    ||||||||||||||||||||||||    
T  30293189 atttgtattgtatcaatatattctatcaatttgattgaatgaatatcgtttattttta 30293246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 45
Target Start/End: Original strand, 31270720 - 31270760
Alignment:
Q  5 atttgtattgtatcgatgtaatctatcaatttgaatgaata 45  Q
    ||||||||||||| |||||| |||||| |||||||||||||    
T  31270720 atttgtattgtattgatgtactctatccatttgaatgaata 31270760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 45
Target Start/End: Original strand, 46926794 - 46926834
Alignment:
Q  5 atttgtattgtatcgatgtaatctatcaatttgaatgaata 45  Q
    ||||| ||| |||||||||| ||||||||||||||||||||    
T  46926794 atttgcattatatcgatgtactctatcaatttgaatgaata 46926834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 48)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 51152522 - 51152590
Alignment:
Q  1 ttggatttgtattgtatcgatgtaatctatcaatttga---atgaatatcgtttatttttatcgaaaaa 66  Q
    |||||||||||||||||||||||| | |||||||||||   |||||||||||||||||||||| |||||    
T  51152522 ttggatttgtattgtatcgatgtactttatcaatttgaatgatgaatatcgtttatttttatccaaaaa 51152590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 7060721 - 7060790
Alignment:
Q  1 ttggatttgtattgtatcgatgtaatctatcaatt----tgaatgaatatcgtttatttttatcgaaaaa 66  Q
    |||||||||||||||||| ||||| ||||||||||    ||||||||||||||||||||||||| |||||    
T  7060721 ttggatttgtattgtatcaatgtactctatcaatttgaatgaatgaatatcgtttatttttatcaaaaaa 7060790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 18502556 - 18502487
Alignment:
Q  1 ttggatttgtattgtatcgatgtaatctatcaatt----tgaatgaatatcgtttatttttatcgaaaaa 66  Q
    |||||||||||||||||||||||| ||||||||||    |||||||||||||||||||||| || |||||    
T  18502556 ttggatttgtattgtatcgatgtactctatcaatttaaatgaatgaatatcgtttatttttgtcaaaaaa 18502487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 27091115 - 27091159
Alignment:
Q  1 ttggatttgtattgtatcgatgtaatctatcaatttgaatgaata 45  Q
    |||||||||||||||||||||||| ||||||||||||||||||||    
T  27091115 ttggatttgtattgtatcgatgtactctatcaatttgaatgaata 27091159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 6882351 - 6882394
Alignment:
Q  1 ttggatttgtattgtatcgatgtaatctatcaatttgaatgaat 44  Q
    |||||||||||||||||||||||| |||||||||||||||||||    
T  6882351 ttggatttgtattgtatcgatgtactctatcaatttgaatgaat 6882394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 13965950 - 13966010
Alignment:
Q  1 ttggatttgtattgtatcgatgtaatctatcaatttgaa----tgaatatcgtttattttt 57  Q
    |||||||||||||||||||||||| ||||||||||||||    ||||||||||||||||||    
T  13965950 ttggatttgtattgtatcgatgtactctatcaatttgaatgaatgaatatcgtttattttt 13966010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 24100540 - 24100583
Alignment:
Q  1 ttggatttgtattgtatcgatgtaatctatcaatttgaatgaat 44  Q
    |||||||||||||||||||||||| |||||||||||||||||||    
T  24100540 ttggatttgtattgtatcgatgtactctatcaatttgaatgaat 24100583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 28837462 - 28837505
Alignment:
Q  1 ttggatttgtattgtatcgatgtaatctatcaatttgaatgaat 44  Q
    |||||||||||||||||||||||| |||||||||||||||||||    
T  28837462 ttggatttgtattgtatcgatgtactctatcaatttgaatgaat 28837505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 38943871 - 38943828
Alignment:
Q  1 ttggatttgtattgtatcgatgtaatctatcaatttgaatgaat 44  Q
    |||||||||||||||||||||||| |||||||||||||||||||    
T  38943871 ttggatttgtattgtatcgatgtactctatcaatttgaatgaat 38943828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 45350784 - 45350741
Alignment:
Q  1 ttggatttgtattgtatcgatgtaatctatcaatttgaatgaat 44  Q
    |||||||||||||||||||||||| |||||||||||||||||||    
T  45350784 ttggatttgtattgtatcgatgtactctatcaatttgaatgaat 45350741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 45360263 - 45360220
Alignment:
Q  1 ttggatttgtattgtatcgatgtaatctatcaatttgaatgaat 44  Q
    |||||||||||||||||||||||| |||||||||||||||||||    
T  45360263 ttggatttgtattgtatcgatgtactctatcaatttgaatgaat 45360220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 4 - 45
Target Start/End: Original strand, 8712918 - 8712959
Alignment:
Q  4 gatttgtattgtatcgatgtaatctatcaatttgaatgaata 45  Q
    ||||||||||||||||||||| ||||||||||||||||||||    
T  8712918 gatttgtattgtatcgatgtactctatcaatttgaatgaata 8712959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 4 - 57
Target Start/End: Original strand, 26674773 - 26674826
Alignment:
Q  4 gatttgtattgtatcgatgtaatctatcaatttgaatgaatatcgtttattttt 57  Q
    |||||||||||||||||| || ||||||||||||||| |||||| |||||||||    
T  26674773 gatttgtattgtatcgatatactctatcaatttgaataaatatcatttattttt 26674826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 5 - 58
Target Start/End: Complemental strand, 31444797 - 31444744
Alignment:
Q  5 atttgtattgtatcgatgtaatctatcaatttgaatgaatatcgtttattttta 58  Q
    ||||||||||||| |||| | | |||||||||||||||||||||||||||||||    
T  31444797 atttgtattgtattgatgcactatatcaatttgaatgaatatcgtttattttta 31444744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 20887471 - 20887402
Alignment:
Q  1 ttggatttgtattgtatcgatgtaatctatcaatt----tgaatgaatatcgtttatttttatcgaaaaa 66  Q
    |||||||| ||||||||||||||| ||||||||||    |||||||||||||||||||||| || |||||    
T  20887471 ttggatttatattgtatcgatgtactctatcaatttaaatgaatgaatatcgtttatttttgtcaaaaaa 20887402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 5 - 66
Target Start/End: Original strand, 42197964 - 42198029
Alignment:
Q  5 atttgtattgtatcgatgtaatctatcaatt----tgaatgaatatcgtttatttttatcgaaaaa 66  Q
    |||||||||||||||||||| ||||||||||    |||||||||||||||||||||| || |||||    
T  42197964 atttgtattgtatcgatgtactctatcaatttgaatgaatgaatatcgtttatttttgtcaaaaaa 42198029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 43244095 - 43244026
Alignment:
Q  1 ttggatttgtattgtatcgatgtaatctatcaatttgaat----gaatatcgtttatttttatcgaaaaa 66  Q
    ||||||||||||||||||| |||| |||||||||||||||    ||||||||||||||||| || |||||    
T  43244095 ttggatttgtattgtatcggtgtactctatcaatttgaatgaatgaatatcgtttatttttgtcaaaaaa 43244026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 393988 - 393945
Alignment:
Q  1 ttggatttgtattgtatcgatgtaatctatcaatttgaatgaat 44  Q
    |||||||||||||||||||||||| | |||||||||||||||||    
T  393988 ttggatttgtattgtatcgatgtactttatcaatttgaatgaat 393945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 5 - 44
Target Start/End: Complemental strand, 626269 - 626230
Alignment:
Q  5 atttgtattgtatcgatgtaatctatcaatttgaatgaat 44  Q
    |||||||||||||||||||| |||||||||||||||||||    
T  626269 atttgtattgtatcgatgtactctatcaatttgaatgaat 626230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 8517173 - 8517130
Alignment:
Q  1 ttggatttgtattgtatcgatgtaatctatcaatttgaatgaat 44  Q
    |||||||||||||||||| ||||| |||||||||||||||||||    
T  8517173 ttggatttgtattgtatcaatgtactctatcaatttgaatgaat 8517130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 5 - 44
Target Start/End: Complemental strand, 20399612 - 20399573
Alignment:
Q  5 atttgtattgtatcgatgtaatctatcaatttgaatgaat 44  Q
    |||||||||||||||||||| |||||||||||||||||||    
T  20399612 atttgtattgtatcgatgtagtctatcaatttgaatgaat 20399573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 5 - 44
Target Start/End: Complemental strand, 24568425 - 24568386
Alignment:
Q  5 atttgtattgtatcgatgtaatctatcaatttgaatgaat 44  Q
    |||| |||||||||||||||||||||||||||||||||||    
T  24568425 atttatattgtatcgatgtaatctatcaatttgaatgaat 24568386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 24826046 - 24826106
Alignment:
Q  1 ttggatttgtattgtatcgatgtaatctatcaatttgaa----tgaatatcgtttattttt 57  Q
    ||||||||||||| |||||||||| ||||||||||||||    ||||||||||||||||||    
T  24826046 ttggatttgtattctatcgatgtactctatcaatttgaatgaatgaatatcgtttattttt 24826106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 31522353 - 31522396
Alignment:
Q  1 ttggatttgtattgtatcgatgtaatctatcaatttgaatgaat 44  Q
    ||||| |||||||||||||||||| |||||||||||||||||||    
T  31522353 ttggacttgtattgtatcgatgtactctatcaatttgaatgaat 31522396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 36124071 - 36124011
Alignment:
Q  1 ttggatttgtattgtatcgatgtaatctatcaattt----gaatgaatatcgtttattttt 57  Q
    |||||||||||||||||||||| | |||||||||||    |||||||||||||||||||||    
T  36124071 ttggatttgtattgtatcgatggactctatcaatttgaaagaatgaatatcgtttattttt 36124011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 56236545 - 56236502
Alignment:
Q  1 ttggatttgtattgtatcgatgtaatctatcaatttgaatgaat 44  Q
    |||||| ||||||||||||||||| |||||||||||||||||||    
T  56236545 ttggatatgtattgtatcgatgtactctatcaatttgaatgaat 56236502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 8 - 59
Target Start/End: Complemental strand, 12716839 - 12716784
Alignment:
Q  8 tgtattgtatcgatgtaatctatcaatttg----aatgaatatcgtttatttttat 59  Q
    ||||||||||||||||||| ||||||||||    ||||||||||||||||||||||    
T  12716839 tgtattgtatcgatgtaatttatcaatttgaataaatgaatatcgtttatttttat 12716784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 4 - 58
Target Start/End: Original strand, 39523817 - 39523875
Alignment:
Q  4 gatttgtattgtatcgatgtaatctatcaat----ttgaatgaatatcgtttattttta 58  Q
    |||||||||||||||||| || |||||||||    ||||||||||||||||||||||||    
T  39523817 gatttgtattgtatcgatatactctatcaatatgattgaatgaatatcgtttattttta 39523875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 4 - 44
Target Start/End: Complemental strand, 24611509 - 24611469
Alignment:
Q  4 gatttgtattgtatcgatgtaatctatcaatttgaatgaat 44  Q
    ||||||||||||||| ||||| |||||||||||||||||||    
T  24611509 gatttgtattgtatcaatgtactctatcaatttgaatgaat 24611469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 5 - 45
Target Start/End: Original strand, 46268076 - 46268116
Alignment:
Q  5 atttgtattgtatcgatgtaatctatcaatttgaatgaata 45  Q
    |||||||||||||||||||| ||||||||||| ||||||||    
T  46268076 atttgtattgtatcgatgtactctatcaatttaaatgaata 46268116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 53648013 - 53648057
Alignment:
Q  1 ttggatttgta-ttgtatcgatgtaatctatcaatttgaatgaat 44  Q
    ||||||||||| ||||||||||||| |||||||||||||||||||    
T  53648013 ttggatttgtaattgtatcgatgtactctatcaatttgaatgaat 53648057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 4 - 44
Target Start/End: Complemental strand, 55600257 - 55600217
Alignment:
Q  4 gatttgtattgtatcgatgtaatctatcaatttgaatgaat 44  Q
    ||||||||||||||||||| | |||||||||||||||||||    
T  55600257 gatttgtattgtatcgatgcactctatcaatttgaatgaat 55600217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 5 - 44
Target Start/End: Original strand, 3159373 - 3159412
Alignment:
Q  5 atttgtattgtatcgatgtaatctatcaatttgaatgaat 44  Q
    |||||||||||||||||||| | |||||||||||||||||    
T  3159373 atttgtattgtatcgatgtactttatcaatttgaatgaat 3159412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 5 - 44
Target Start/End: Original strand, 6912091 - 6912130
Alignment:
Q  5 atttgtattgtatcgatgtaatctatcaatttgaatgaat 44  Q
    ||||||||||||| |||||| |||||||||||||||||||    
T  6912091 atttgtattgtattgatgtactctatcaatttgaatgaat 6912130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 5 - 57
Target Start/End: Complemental strand, 7083531 - 7083475
Alignment:
Q  5 atttgtattgtatcgatgtaatctatcaatt----tgaatgaatatcgtttattttt 57  Q
    |||| ||||||||||||||| ||||||||||    ||||||||||||||||||||||    
T  7083531 atttatattgtatcgatgtactctatcaatttgagtgaatgaatatcgtttattttt 7083475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 11210027 - 11209984
Alignment:
Q  1 ttggatttgtattgtatcgatgtaatctatcaatttgaatgaat 44  Q
    ||||||||| ||||||| |||||| |||||||||||||||||||    
T  11210027 ttggatttgcattgtattgatgtactctatcaatttgaatgaat 11209984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 19745797 - 19745857
Alignment:
Q  1 ttggatttgtattgtatcgatgtaatctatcaatt----tgaatgaatatcgtttattttt 57  Q
    ||||||||||||||||||||| || ||||||||||    ||| ||||||||||||||||||    
T  19745797 ttggatttgtattgtatcgatatactctatcaatttaaatgattgaatatcgtttattttt 19745857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 19794009 - 19793949
Alignment:
Q  1 ttggatttgtattgtatcgatgtaatctatcaatt----tgaatgaatatcgtttattttt 57  Q
    ||||||||||||||||||||| || ||||||||||    ||| ||||||||||||||||||    
T  19794009 ttggatttgtattgtatcgatatactctatcaatttaaatgattgaatatcgtttattttt 19793949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 5 - 44
Target Start/End: Complemental strand, 29266614 - 29266575
Alignment:
Q  5 atttgtattgtatcgatgtaatctatcaatttgaatgaat 44  Q
    |||||||||||||| ||||| |||||||||||||||||||    
T  29266614 atttgtattgtatcaatgtactctatcaatttgaatgaat 29266575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 5 - 44
Target Start/End: Complemental strand, 32616569 - 32616530
Alignment:
Q  5 atttgtattgtatcgatgtaatctatcaatttgaatgaat 44  Q
    ||||||||| |||||||||| |||||||||||||||||||    
T  32616569 atttgtattatatcgatgtactctatcaatttgaatgaat 32616530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 7084347 - 7084409
Alignment:
Q  1 ttggatttgtatt--gtatcgatgtaatctatcaatttgaa----tgaatatcgtttattttt 57  Q
    |||||||||||||  ||||||||||| ||||||||||||||    ||||||||||||||||||    
T  7084347 ttggatttgtattatgtatcgatgtactctatcaatttgaatgaatgaatatcgtttattttt 7084409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 11 - 66
Target Start/End: Original strand, 14346827 - 14346886
Alignment:
Q  11 attgtatcgatgtaatctatcaatt----tgaatgaatatcgtttatttttatcgaaaaa 66  Q
    |||||||||||||| ||||||||||    |||||||||||||||||||||| || |||||    
T  14346827 attgtatcgatgtactctatcaatttgaatgaatgaatatcgtttatttttgtcaaaaaa 14346886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 5 - 51
Target Start/End: Original strand, 23926431 - 23926477
Alignment:
Q  5 atttgtattgtatcgatgtaatctatcaatttgaatgaatatcgttt 51  Q
    |||||||||||||| ||||| |||||||||||||| |||| ||||||    
T  23926431 atttgtattgtatcaatgtactctatcaatttgaacgaatgtcgttt 23926477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 22757491 - 22757524
Alignment:
Q  1 ttggatttgtattgtatcgatgtaatctatcaat 34  Q
    |||||||||||||||||||||||| |||||||||    
T  22757491 ttggatttgtattgtatcgatgtactctatcaat 22757524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 6 - 43
Target Start/End: Original strand, 24789588 - 24789625
Alignment:
Q  6 tttgtattgtatcgatgtaatctatcaatttgaatgaa 43  Q
    ||||||||||||||||||| ||||| ||||||||||||    
T  24789588 tttgtattgtatcgatgtactctattaatttgaatgaa 24789625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 6 - 43
Target Start/End: Complemental strand, 24818671 - 24818634
Alignment:
Q  6 tttgtattgtatcgatgtaatctatcaatttgaatgaa 43  Q
    ||||||||||||||||||| ||||| ||||||||||||    
T  24818671 tttgtattgtatcgatgtactctattaatttgaatgaa 24818634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 57
Target Start/End: Original strand, 30202448 - 30202505
Alignment:
Q  4 gatttgtattgtatcgatgtaatctatcaatttga----atgaatatcgtttattttt 57  Q
    |||||||||||||| |||||| |||||||||||||    |||||||||||||| ||||    
T  30202448 gatttgtattgtatagatgtactctatcaatttgattgaatgaatatcgtttactttt 30202505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 45
Target Start/End: Original strand, 41837725 - 41837765
Alignment:
Q  5 atttgtattgtatcgatgtaatctatcaatttgaatgaata 45  Q
    ||||||| ||||| |||||| ||||||||||||||||||||    
T  41837725 atttgtagtgtattgatgtactctatcaatttgaatgaata 41837765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 36)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 3 - 44
Target Start/End: Original strand, 10148345 - 10148386
Alignment:
Q  3 ggatttgtattgtatcgatgtaatctatcaatttgaatgaat 44  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  10148345 ggatttgtattgtatcgatgtaatctatcaatttgaatgaat 10148386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 5 - 57
Target Start/End: Original strand, 24210651 - 24210703
Alignment:
Q  5 atttgtattgtatcgatgtaatctatcaatttgaatgaatatcgtttattttt 57  Q
    |||| ||||||||||||||| ||||||||||||||||||||| ||||||||||    
T  24210651 atttttattgtatcgatgtactctatcaatttgaatgaatattgtttattttt 24210703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 24790892 - 24790849
Alignment:
Q  1 ttggatttgtattgtatcgatgtaatctatcaatttgaatgaat 44  Q
    |||||||||||||||||||||||| |||||||||||||||||||    
T  24790892 ttggatttgtattgtatcgatgtactctatcaatttgaatgaat 24790849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 28296837 - 28296794
Alignment:
Q  1 ttggatttgtattgtatcgatgtaatctatcaatttgaatgaat 44  Q
    |||||||||||||||||||||||| |||||||||||||||||||    
T  28296837 ttggatttgtattgtatcgatgtactctatcaatttgaatgaat 28296794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 5 - 66
Target Start/End: Complemental strand, 26046327 - 26046265
Alignment:
Q  5 atttgtattgtatcga-tgtaatctatcaatttgaatgaatatcgtttatttttatcgaaaaa 66  Q
    ||||| |||||||||| |||| |||||||||||||||||||||||||||||||| || |||||    
T  26046327 atttgcattgtatcgaatgtattctatcaatttgaatgaatatcgtttatttttttcaaaaaa 26046265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 31202855 - 31202924
Alignment:
Q  1 ttggatttgtattgtatcgatgtaatctatcaatt----tgaatgaatatcgtttatttttatcgaaaaa 66  Q
    ||||||||||||| |||||||||| ||||||||||    |||||||||||||||||||||| || |||||    
T  31202855 ttggatttgtattatatcgatgtactctatcaatttgaatgaatgaatatcgtttatttttgtccaaaaa 31202924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 5 - 66
Target Start/End: Original strand, 41362144 - 41362209
Alignment:
Q  5 atttgtattgtatcgatgtaatctatcaatt----tgaatgaatatcgtttatttttatcgaaaaa 66  Q
    ||||||||||||| |||||| ||||||||||    ||||||||||||||||||||||||| |||||    
T  41362144 atttgtattgtattgatgtactctatcaatttgaatgaatgaatatcgtttatttttatcaaaaaa 41362209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 2024946 - 2024903
Alignment:
Q  1 ttggatttgtattgtatcgatgtaatctatcaatttgaatgaat 44  Q
    ||||||||||||| |||||||||| |||||||||||||||||||    
T  2024946 ttggatttgtattatatcgatgtactctatcaatttgaatgaat 2024903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 7579577 - 7579534
Alignment:
Q  1 ttggatttgtattgtatcgatgtaatctatcaatttgaatgaat 44  Q
    |||||||| ||||||||||||||| |||||||||||||||||||    
T  7579577 ttggatttatattgtatcgatgtactctatcaatttgaatgaat 7579534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 5 - 44
Target Start/End: Original strand, 9501979 - 9502018
Alignment:
Q  5 atttgtattgtatcgatgtaatctatcaatttgaatgaat 44  Q
    |||||||||||||||||||| |||||||||||||||||||    
T  9501979 atttgtattgtatcgatgtactctatcaatttgaatgaat 9502018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 11162293 - 11162336
Alignment:
Q  1 ttggatttgtattgtatcgatgtaatctatcaatttgaatgaat 44  Q
    |||||||||||||||||||||||| || ||||||||||||||||    
T  11162293 ttggatttgtattgtatcgatgtactccatcaatttgaatgaat 11162336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 6 - 44
Target Start/End: Complemental strand, 1809955 - 1809917
Alignment:
Q  6 tttgtattgtatcgatgtaatctatcaatttgaatgaat 44  Q
    ||||||||||||||||||| |||||||||||||||||||    
T  1809955 tttgtattgtatcgatgtactctatcaatttgaatgaat 1809917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 13575931 - 13575869
Alignment:
Q  1 ttggatttgtattgtatcgatgtaatctatcaatt----tgaatgaatatcgtttatttttat 59  Q
    |||||| ||||||||||||||||| ||||||||||    |||||||||||||| |||||||||    
T  13575931 ttggatatgtattgtatcgatgtactctatcaatttaaatgaatgaatatcgtctatttttat 13575869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 31308555 - 31308592
Alignment:
Q  1 ttggatttgtattgtatcgatgtaatctatcaatttga 38  Q
    |||||||||||||||||||||||| |||||||||||||    
T  31308555 ttggatttgtattgtatcgatgtactctatcaatttga 31308592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 5 - 58
Target Start/End: Original strand, 36261345 - 36261398
Alignment:
Q  5 atttgtattgtatcgatgtaatctatcaatttgaatgaatatcgtttattttta 58  Q
    |||||||||||||||| ||| ||||  |||||||||||||||| ||||||||||    
T  36261345 atttgtattgtatcgacgtactctaaaaatttgaatgaatatcatttattttta 36261398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 5 - 66
Target Start/End: Complemental strand, 2234188 - 2234123
Alignment:
Q  5 atttgtattgtatcgatgtaatctatcaatttgaat----gaatatcgtttatttttatcgaaaaa 66  Q
    ||||||||| |||||||||| |||||||||||||||    ||||||||||||||||| || |||||    
T  2234188 atttgtattatatcgatgtactctatcaatttgaatgaatgaatatcgtttatttttgtcaaaaaa 2234123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 8 - 57
Target Start/End: Original strand, 2968929 - 2968982
Alignment:
Q  8 tgtattgtatcgatgtaatctatcaatttgaa----tgaatatcgtttattttt 57  Q
    ||||||||||||||||| ||||||||||||||    ||||||||||||||||||    
T  2968929 tgtattgtatcgatgtactctatcaatttgaatgaatgaatatcgtttattttt 2968982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 4 - 44
Target Start/End: Original strand, 4757558 - 4757598
Alignment:
Q  4 gatttgtattgtatcgatgtaatctatcaatttgaatgaat 44  Q
    ||||||||||||||| ||||| |||||||||||||||||||    
T  4757558 gatttgtattgtatcaatgtactctatcaatttgaatgaat 4757598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 5 - 66
Target Start/End: Complemental strand, 13570485 - 13570420
Alignment:
Q  5 atttgtattgtatcgatgtaatctatcaatt----tgaatgaatatcgtttatttttatcgaaaaa 66  Q
    ||||||||||||||||| || ||||||||||    |||||||||||||||||||||| || |||||    
T  13570485 atttgtattgtatcgatatactctatcaatttaaatgaatgaatatcgtttatttttgtcaaaaaa 13570420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 5 - 45
Target Start/End: Complemental strand, 14600416 - 14600376
Alignment:
Q  5 atttgtattgtatcgatgtaatctatcaatttgaatgaata 45  Q
    |||||||||||||||||||| ||||| ||||||||||||||    
T  14600416 atttgtattgtatcgatgtactctattaatttgaatgaata 14600376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 10 - 45
Target Start/End: Original strand, 5526218 - 5526253
Alignment:
Q  10 tattgtatcgatgtaatctatcaatttgaatgaata 45  Q
    ||||||||||||||| ||||||||||||||||||||    
T  5526218 tattgtatcgatgtactctatcaatttgaatgaata 5526253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 5 - 44
Target Start/End: Complemental strand, 8054532 - 8054493
Alignment:
Q  5 atttgtattgtatcgatgtaatctatcaatttgaatgaat 44  Q
    ||||||||| |||||||||| |||||||||||||||||||    
T  8054532 atttgtattatatcgatgtattctatcaatttgaatgaat 8054493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 5 - 44
Target Start/End: Original strand, 15665931 - 15665970
Alignment:
Q  5 atttgtattgtatcgatgtaatctatcaatttgaatgaat 44  Q
    ||||| |||||||||||||| |||||||||||||||||||    
T  15665931 atttgcattgtatcgatgtactctatcaatttgaatgaat 15665970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 5 - 44
Target Start/End: Complemental strand, 18196870 - 18196831
Alignment:
Q  5 atttgtattgtatcgatgtaatctatcaatttgaatgaat 44  Q
    ||||||||||||||||| || |||||||||||||||||||    
T  18196870 atttgtattgtatcgatatactctatcaatttgaatgaat 18196831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 32778694 - 32778655
Alignment:
Q  1 ttggatttgtattgtatcgatgtaatctatcaatttgaat 40  Q
    ||||||||| |||||||||||||| |||||||||||||||    
T  32778694 ttggatttgaattgtatcgatgtactctatcaatttgaat 32778655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 5 - 57
Target Start/End: Original strand, 37613047 - 37613103
Alignment:
Q  5 atttgtattgtatcgatgtaatctatcaatttgaa----tgaatatcgtttattttt 57  Q
    ||||||||||||||||| || ||||||||||||||    ||||||||||||||||||    
T  37613047 atttgtattgtatcgatatactctatcaatttgaatgaatgaatatcgtttattttt 37613103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 16 - 55
Target Start/End: Original strand, 37720240 - 37720279
Alignment:
Q  16 atcgatgtaatctatcaatttgaatgaatatcgtttattt 55  Q
    ||||||||| |||||||||||||||||||||| |||||||    
T  37720240 atcgatgtactctatcaatttgaatgaatatcatttattt 37720279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 5 - 58
Target Start/End: Original strand, 7102295 - 7102348
Alignment:
Q  5 atttgtattgtatcgatgtaatctatcaatttgaatgaatatcgtttattttta 58  Q
    |||||||||||||| || || ||||| ||||| |||||||||| ||||||||||    
T  7102295 atttgtattgtatcaatatagtctattaatttaaatgaatatcatttattttta 7102348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 5 - 57
Target Start/End: Original strand, 24700246 - 24700301
Alignment:
Q  5 atttgtattgtatcgatgtaatctatcaatttgaatga---atatcgtttattttt 57  Q
    ||||| |||||||||||||| ||||| |||||||||||   |||||||||||||||    
T  24700246 atttgaattgtatcgatgtactctatgaatttgaatgaatgatatcgtttattttt 24700301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 5 - 59
Target Start/End: Complemental strand, 38545534 - 38545476
Alignment:
Q  5 atttgtattgtatcgatgtaatctatcaatttgaat----gaatatcgtttatttttat 59  Q
    |||| |||||||||||| || |||||||||||||||    |||||||||||||||||||    
T  38545534 atttatattgtatcgatatactctatcaatttgaatgaatgaatatcgtttatttttat 38545476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 57
Target Start/End: Complemental strand, 10793378 - 10793326
Alignment:
Q  5 atttgtattgtatcgatgtaatctatcaatttgaatgaatatcgtttattttt 57  Q
    |||||||||||||||| ||| | | | ||||||||| ||||||||||||||||    
T  10793378 atttgtattgtatcgacgtactttgttaatttgaataaatatcgtttattttt 10793326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 58
Target Start/End: Original strand, 13977800 - 13977857
Alignment:
Q  5 atttgtattgtatcgatgtaatctatcaattt----gaatgaatatcgtttattttta 58  Q
    ||||| |||||||||||||| |||||||||||    ||||||||||| ||||||||||    
T  13977800 atttgcattgtatcgatgtactctatcaatttgaacgaatgaatatcatttattttta 13977857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 8 - 44
Target Start/End: Complemental strand, 14530637 - 14530601
Alignment:
Q  8 tgtattgtatcgatgtaatctatcaatttgaatgaat 44  Q
    ||||||| ||||||||| |||||||||||||||||||    
T  14530637 tgtattgcatcgatgtactctatcaatttgaatgaat 14530601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 45
Target Start/End: Complemental strand, 30026600 - 30026560
Alignment:
Q  5 atttgtattgtatcgatgtaatctatcaatttgaatgaata 45  Q
    |||||||||||||| || || ||||||||||||||||||||    
T  30026600 atttgtattgtatcaatatactctatcaatttgaatgaata 30026560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 66
Target Start/End: Complemental strand, 39067408 - 39067343
Alignment:
Q  5 atttgtattgtatcgatgtaatctatcaattt----gaatgaatatcgtttatttttatcgaaaaa 66  Q
    |||||||| |||||||| || |||||||||||    ||||||||||||||||||||| || |||||    
T  39067408 atttgtatagtatcgatatactctatcaatttaaaagaatgaatatcgtttatttttgtcaaaaaa 39067343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 45
Target Start/End: Complemental strand, 43936898 - 43936858
Alignment:
Q  5 atttgtattgtatcgatgtaatctatcaatttgaatgaata 45  Q
    ||||||||||||||||| || |||||||||| |||||||||    
T  43936898 atttgtattgtatcgatctactctatcaattcgaatgaata 43936858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 47)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 5 - 75
Target Start/End: Original strand, 11833429 - 11833502
Alignment:
Q  5 atttgtattgtatcgatgtaatctatcaatt----tgaatgaatatcgtttatttttatcgaaaaagaaagttat 75  Q
    |||||||||||||||||||| ||||||||||    ||||||||||||||||||||||||| ||||| ||||||||    
T  11833429 atttgtattgtatcgatgtactctatcaatttgaatgaatgaatatcgtttatttttatc-aaaaaaaaagttat 11833502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 36253337 - 36253406
Alignment:
Q  1 ttggatttgtattgtatcgatgtaatctatcaatttgaatgaa----tatcgtttatttttatcgaaaaa 66  Q
    |||||||||||||||||||||||| ||||||||||||||||||    |||||||||||||| || |||||    
T  36253337 ttggatttgtattgtatcgatgtactctatcaatttgaatgaatgagtatcgtttatttttgtcaaaaaa 36253406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 21991069 - 21991129
Alignment:
Q  1 ttggatttgtattgtatcgatgtaatctatcaatttgaa----tgaatatcgtttattttt 57  Q
    |||||||||||||||||||||||| ||||||||||||||    ||||||||||||||||||    
T  21991069 ttggatttgtattgtatcgatgtactctatcaatttgaatgaatgaatatcgtttattttt 21991129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 5 - 44
Target Start/End: Complemental strand, 31254841 - 31254802
Alignment:
Q  5 atttgtattgtatcgatgtaatctatcaatttgaatgaat 44  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  31254841 atttgtattgtatcgatgtaatctatcaatttgaatgaat 31254802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 45482459 - 45482502
Alignment:
Q  1 ttggatttgtattgtatcgatgtaatctatcaatttgaatgaat 44  Q
    |||||||||||||||||||||||| |||||||||||||||||||    
T  45482459 ttggatttgtattgtatcgatgtactctatcaatttgaatgaat 45482502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 4 - 59
Target Start/End: Complemental strand, 24319934 - 24319875
Alignment:
Q  4 gatttgtattgtatcgatgtaatctatcaatt----tgaatgaatatcgtttatttttat 59  Q
    ||||||||||||||||||||| ||||||||||    ||||||||||||||||||||||||    
T  24319934 gatttgtattgtatcgatgtactctatcaatttaaatgaatgaatatcgtttatttttat 24319875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 9785724 - 9785793
Alignment:
Q  1 ttggatttgtattgtatcgatgtaatctatcaatt----tgaatgaatatcgtttatttttatcgaaaaa 66  Q
    ||||||||||||||||||||||||  |||||||||    |||||||||||||||||||||| || |||||    
T  9785724 ttggatttgtattgtatcgatgtaccctatcaatttgaatgaatgaatatcgtttatttttgtcaaaaaa 9785793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 5 - 66
Target Start/End: Original strand, 41288367 - 41288432
Alignment:
Q  5 atttgtattgtatcgatgtaatctatcaatttgaat----gaatatcgtttatttttatcgaaaaa 66  Q
    |||||||||||||||||||| |||||||||||||||    ||||||||||||||||| || |||||    
T  41288367 atttgtattgtatcgatgtactctatcaatttgaatgaaagaatatcgtttatttttgtcaaaaaa 41288432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 46025769 - 46025700
Alignment:
Q  1 ttggatttgtattgtatcgatgtaatctatcaatttgaat----gaatatcgtttatttttatcgaaaaa 66  Q
    |||||||||||||||||||||||| | |||||||||||||    ||||||||||||||||| || |||||    
T  46025769 ttggatttgtattgtatcgatgtactttatcaatttgaatgaatgaatatcgtttatttttgtcaaaaaa 46025700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 1280851 - 1280791
Alignment:
Q  1 ttggatttgtattgtatcgatgtaatctatcaatttg----aatgaatatcgtttattttt 57  Q
    ||||||||||||| |||||||||| ||||||||||||    ||||||||||||||||||||    
T  1280851 ttggatttgtattatatcgatgtactctatcaatttgaataaatgaatatcgtttattttt 1280791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 4621094 - 4621051
Alignment:
Q  1 ttggatttgtattgtatcgatgtaatctatcaatttgaatgaat 44  Q
    ||||||||| |||||||||||||| |||||||||||||||||||    
T  4621094 ttggatttgaattgtatcgatgtactctatcaatttgaatgaat 4621051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 36719274 - 36719231
Alignment:
Q  1 ttggatttgtattgtatcgatgtaatctatcaatttgaatgaat 44  Q
    |||||||||||||||||||||| | |||||||||||||||||||    
T  36719274 ttggatttgtattgtatcgatgcactctatcaatttgaatgaat 36719231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 43847380 - 43847423
Alignment:
Q  1 ttggatttgtattgtatcgatgtaatctatcaatttgaatgaat 44  Q
    ||||||||||||||||||||| || |||||||||||||||||||    
T  43847380 ttggatttgtattgtatcgatatactctatcaatttgaatgaat 43847423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 48304106 - 48304063
Alignment:
Q  1 ttggatttgtattgtatcgatgtaatctatcaatttgaatgaat 44  Q
    |||||||||||||||||||||||| | |||||||||||||||||    
T  48304106 ttggatttgtattgtatcgatgtactttatcaatttgaatgaat 48304063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 4 - 66
Target Start/End: Original strand, 32741153 - 32741219
Alignment:
Q  4 gatttgtattgtatcgatgtaatctatcaatttg----aatgaatatcgtttatttttatcgaaaaa 66  Q
    |||||||||||||||||| || ||||||||||||    |||||||||||||||||||| || |||||    
T  32741153 gatttgtattgtatcgatatactctatcaatttgaataaatgaatatcgtttatttttgtcaaaaaa 32741219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 7 - 44
Target Start/End: Original strand, 42645068 - 42645105
Alignment:
Q  7 ttgtattgtatcgatgtaatctatcaatttgaatgaat 44  Q
    |||||||||||||||||| |||||||||||||||||||    
T  42645068 ttgtattgtatcgatgtactctatcaatttgaatgaat 42645105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 5 - 45
Target Start/End: Original strand, 5684766 - 5684806
Alignment:
Q  5 atttgtattgtatcgatgtaatctatcaatttgaatgaata 45  Q
    ||||||||||||||| |||| ||||||||||||||||||||    
T  5684766 atttgtattgtatcggtgtactctatcaatttgaatgaata 5684806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 5 - 45
Target Start/End: Original strand, 5709816 - 5709856
Alignment:
Q  5 atttgtattgtatcgatgtaatctatcaatttgaatgaata 45  Q
    ||||||||||||||| |||| ||||||||||||||||||||    
T  5709816 atttgtattgtatcggtgtactctatcaatttgaatgaata 5709856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 5 - 66
Target Start/End: Original strand, 6667806 - 6667871
Alignment:
Q  5 atttgtattgtatcgatgtaatctatcaatt----tgaatgaatatcgtttatttttatcgaaaaa 66  Q
    |||||||||||||||||||  ||||||||||    |||||||||||||||||||||| || |||||    
T  6667806 atttgtattgtatcgatgtgctctatcaatttgaatgaatgaatatcgtttatttttgtcaaaaaa 6667871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 5 - 45
Target Start/End: Original strand, 14762428 - 14762468
Alignment:
Q  5 atttgtattgtatcgatgtaatctatcaatttgaatgaata 45  Q
    |||||||| ||||| ||||||||||||||||||||||||||    
T  14762428 atttgtatagtatcaatgtaatctatcaatttgaatgaata 14762468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 5 - 45
Target Start/End: Original strand, 27535838 - 27535878
Alignment:
Q  5 atttgtattgtatcgatgtaatctatcaatttgaatgaata 45  Q
    |||||||||||||||||||| ||||||||||| ||||||||    
T  27535838 atttgtattgtatcgatgtactctatcaatttaaatgaata 27535878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 4 - 57
Target Start/End: Original strand, 37593493 - 37593550
Alignment:
Q  4 gatttgtattgtatcgatgtaatctatcaatttgaa----tgaatatcgtttattttt 57  Q
    ||||||||||||||||||||| || |||||||||||    ||||||||||||||||||    
T  37593493 gatttgtattgtatcgatgtactccatcaatttgaatgaatgaatatcgtttattttt 37593550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 4 - 44
Target Start/End: Complemental strand, 45949416 - 45949376
Alignment:
Q  4 gatttgtattgtatcgatgtaatctatcaatttgaatgaat 44  Q
    |||| |||||||||||||||| |||||||||||||||||||    
T  45949416 gattcgtattgtatcgatgtactctatcaatttgaatgaat 45949376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 8180208 - 8180251
Alignment:
Q  1 ttggatttgtattgtatcgatgtaatctatcaatttgaatgaat 44  Q
    |||||||||||||||||  ||||| |||||||||||||||||||    
T  8180208 ttggatttgtattgtatgaatgtactctatcaatttgaatgaat 8180251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 5 - 44
Target Start/End: Complemental strand, 21329022 - 21328983
Alignment:
Q  5 atttgtattgtatcgatgtaatctatcaatttgaatgaat 44  Q
    |||||||||| ||||||||| |||||||||||||||||||    
T  21329022 atttgtattgcatcgatgtactctatcaatttgaatgaat 21328983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 5 - 44
Target Start/End: Original strand, 21603869 - 21603908
Alignment:
Q  5 atttgtattgtatcgatgtaatctatcaatttgaatgaat 44  Q
    ||||||||||||| |||||| |||||||||||||||||||    
T  21603869 atttgtattgtattgatgtactctatcaatttgaatgaat 21603908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 5 - 44
Target Start/End: Complemental strand, 22747219 - 22747180
Alignment:
Q  5 atttgtattgtatcgatgtaatctatcaatttgaatgaat 44  Q
    |||| ||||||||||||||| |||||||||||||||||||    
T  22747219 atttatattgtatcgatgtactctatcaatttgaatgaat 22747180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 24988214 - 24988171
Alignment:
Q  1 ttggatttgtattgtatcgatgtaatctatcaatttgaatgaat 44  Q
    ||||||||||||| |||||||||| ||||||||||| |||||||    
T  24988214 ttggatttgtattatatcgatgtattctatcaatttaaatgaat 24988171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 5 - 40
Target Start/End: Complemental strand, 28664666 - 28664631
Alignment:
Q  5 atttgtattgtatcgatgtaatctatcaatttgaat 40  Q
    ||||| ||||||||||||||||||||||||||||||    
T  28664666 atttgcattgtatcgatgtaatctatcaatttgaat 28664631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 5 - 44
Target Start/End: Complemental strand, 29804403 - 29804364
Alignment:
Q  5 atttgtattgtatcgatgtaatctatcaatttgaatgaat 44  Q
    ||||||||| |||||||||| |||||||||||||||||||    
T  29804403 atttgtattatatcgatgtactctatcaatttgaatgaat 29804364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 37375769 - 37375710
Alignment:
Q  1 ttggatttgtattgtatcgatgtaatctatcaatttgaatgaat----atcgtttattttt 57  Q
    |||||||||||||||||| ||||| |||||||||||||||||||    |||||||||||||    
T  37375769 ttggatttgtattgtatc-atgtactctatcaatttgaatgaatgaatatcgtttattttt 37375710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 5 - 44
Target Start/End: Complemental strand, 39532685 - 39532646
Alignment:
Q  5 atttgtattgtatcgatgtaatctatcaatttgaatgaat 44  Q
    ||||||||||||||| |||| |||||||||||||||||||    
T  39532685 atttgtattgtatcggtgtactctatcaatttgaatgaat 39532646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 5 - 44
Target Start/End: Complemental strand, 42603489 - 42603450
Alignment:
Q  5 atttgtattgtatcgatgtaatctatcaatttgaatgaat 44  Q
    |||| ||||||||||||||| |||||||||||||||||||    
T  42603489 atttatattgtatcgatgtactctatcaatttgaatgaat 42603450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 44482592 - 44482549
Alignment:
Q  1 ttggatttgtattgtatcgatgtaatctatcaatttgaatgaat 44  Q
    |||||||| |||| |||||||||| |||||||||||||||||||    
T  44482592 ttggatttatattatatcgatgtactctatcaatttgaatgaat 44482549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 21954547 - 21954484
Alignment:
Q  1 ttggatttgtattgtatcgatgtaatctatcaatt----tgaatgaatatcgtttatttttatc 60  Q
    |||||||| ||||||| ||||||| ||||||||||    | |||||||||||||||||||||||    
T  21954547 ttggatttatattgtaacgatgtagtctatcaattttaataaatgaatatcgtttatttttatc 21954484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 10 - 44
Target Start/End: Original strand, 32312916 - 32312950
Alignment:
Q  10 tattgtatcgatgtaatctatcaatttgaatgaat 44  Q
    ||||||||||||||| |||||||||||||||||||    
T  32312916 tattgtatcgatgtactctatcaatttgaatgaat 32312950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 4 - 66
Target Start/End: Original strand, 23808736 - 23808802
Alignment:
Q  4 gatttgtattgtatcgatgtaatctatcaatt----tgaatgaatatcgtttatttttatcgaaaaa 66  Q
    |||||||||||||||||| || ||| ||||||    |||||||||||||||||||||| || |||||    
T  23808736 gatttgtattgtatcgatatactctctcaatttgaatgaatgaatatcgtttatttttgtcaaaaaa 23808802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 45
Target Start/End: Original strand, 5238345 - 5238385
Alignment:
Q  5 atttgtattgtatcgatgtaatctatcaatttgaatgaata 45  Q
    ||||||||||||| |||||| ||| ||||||||||||||||    
T  5238345 atttgtattgtatggatgtactctgtcaatttgaatgaata 5238385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 44
Target Start/End: Original strand, 10574775 - 10574815
Alignment:
Q  4 gatttgtattgtatcgatgtaatctatcaatttgaatgaat 44  Q
    ||||| |||||||| |||||| |||||||||||||||||||    
T  10574775 gatttatattgtattgatgtactctatcaatttgaatgaat 10574815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 45
Target Start/End: Complemental strand, 15017163 - 15017123
Alignment:
Q  5 atttgtattgtatcgatgtaatctatcaatttgaatgaata 45  Q
    |||||||||||||||||||| | ||||||||||||| ||||    
T  15017163 atttgtattgtatcgatgtattttatcaatttgaatcaata 15017123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 44
Target Start/End: Complemental strand, 17473472 - 17473432
Alignment:
Q  4 gatttgtattgtatcgatgtaatctatcaatttgaatgaat 44  Q
    ||||||||||||| ||||||| |||||||||||||| ||||    
T  17473472 gatttgtattgtaccgatgtactctatcaatttgaaagaat 17473432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 36
Target Start/End: Complemental strand, 17508915 - 17508883
Alignment:
Q  4 gatttgtattgtatcgatgtaatctatcaattt 36  Q
    ||||||||||||||||||||| |||||||||||    
T  17508915 gatttgtattgtatcgatgtactctatcaattt 17508883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 36
Target Start/End: Original strand, 17544299 - 17544331
Alignment:
Q  4 gatttgtattgtatcgatgtaatctatcaattt 36  Q
    ||||||||||||||||||||| |||||||||||    
T  17544299 gatttgtattgtatcgatgtactctatcaattt 17544331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 44
Target Start/End: Original strand, 17579742 - 17579782
Alignment:
Q  4 gatttgtattgtatcgatgtaatctatcaatttgaatgaat 44  Q
    ||||||||||||| ||||||| |||||||||||||| ||||    
T  17579742 gatttgtattgtaccgatgtactctatcaatttgaaagaat 17579782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 45
Target Start/End: Original strand, 32083624 - 32083664
Alignment:
Q  5 atttgtattgtatcgatgtaatctatcaatttgaatgaata 45  Q
    |||||||||||||||| ||| ||||||||||||||| ||||    
T  32083624 atttgtattgtatcgacgtactctatcaatttgaattaata 32083664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 57
Target Start/End: Complemental strand, 38338893 - 38338842
Alignment:
Q  5 atttgtattgtatcgatgtaatctatcaatttgaatgaatatcgtttattttt 57  Q
    |||| |||||||||||| || |||||| ||||||| |||||||||||||||||    
T  38338893 atttatattgtatcgat-tattctatctatttgaacgaatatcgtttattttt 38338842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 40761995 - 40762064
Alignment:
Q  1 ttggatttgtattgtatcgatgtaatctatcaatttg----aatgaatatcgtttatttttatcgaaaaa 66  Q
    ||||||||||| ||||||||| || ||||||||||||    |||||||||||||| ||||| || |||||    
T  40761995 ttggatttgtactgtatcgatatactctatcaatttgaataaatgaatatcgtttttttttgtcaaaaaa 40762064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 26)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 23101121 - 23101062
Alignment:
Q  1 ttggatttgtattgtatcgatgtaatctatcaatt---tgaatgaatatcgtttattttt 57  Q
    |||||||||||||||||||||||| ||||||||||   ||||||||||||||||||||||    
T  23101121 ttggatttgtattgtatcgatgtactctatcaatttgatgaatgaatatcgtttattttt 23101062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 2488529 - 2488573
Alignment:
Q  1 ttggatttgtattgtatcgatgtaatctatcaatttgaatgaata 45  Q
    |||||||||||||||||||||||| ||||||||||||||||||||    
T  2488529 ttggatttgtattgtatcgatgtactctatcaatttgaatgaata 2488573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 8693385 - 8693341
Alignment:
Q  1 ttggatttgtattgtatcgatgtaatctatcaatttgaatgaata 45  Q
    |||||||||||||||||||||||| ||||||||||||||||||||    
T  8693385 ttggatttgtattgtatcgatgtactctatcaatttgaatgaata 8693341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 23654656 - 23654725
Alignment:
Q  1 ttggatttgtattgtatcgatgtaatctatcaatt----tgaatgaatatcgtttatttttatcgaaaaa 66  Q
    |||||||||||||||||||||||| ||||||||||    |||||||||||||||||||||| || |||||    
T  23654656 ttggatttgtattgtatcgatgtactctatcaatttgaatgaatgaatatcgtttatttttgtcaaaaaa 23654725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 6419593 - 6419550
Alignment:
Q  1 ttggatttgtattgtatcgatgtaatctatcaatttgaatgaat 44  Q
    |||||||||||||||||||||||| |||||||||||||||||||    
T  6419593 ttggatttgtattgtatcgatgtagtctatcaatttgaatgaat 6419550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 19402566 - 19402523
Alignment:
Q  1 ttggatttgtattgtatcgatgtaatctatcaatttgaatgaat 44  Q
    |||||||||||||||||||||||| |||||||||||||||||||    
T  19402566 ttggatttgtattgtatcgatgtactctatcaatttgaatgaat 19402523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 14782869 - 14782828
Alignment:
Q  1 ttggatttgtattgtatcgatgtaatctatcaatttgaatga 42  Q
    |||||||||||||||||||||||| |||||||||||||||||    
T  14782869 ttggatttgtattgtatcgatgtactctatcaatttgaatga 14782828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 1106577 - 1106508
Alignment:
Q  1 ttggatttgtattgtatcgatgtaatctatcaat----ttgaatgaatatcgtttatttttatcgaaaaa 66  Q
    |||||||||||||||||||||||| |||||||||     |||||||||||||||||||||| || |||||    
T  1106577 ttggatttgtattgtatcgatgtactctatcaatctgaatgaatgaatatcgtttatttttgtcaaaaaa 1106508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 5146333 - 5146402
Alignment:
Q  1 ttggatttgtattgtatcgatgtaatctatcaatt----tgaatgaatatcgtttatttttatcgaaaaa 66  Q
    ||||||||||||| |||||||||| ||||||||||    |||||||||||||||||||||| || |||||    
T  5146333 ttggatttgtattatatcgatgtactctatcaatttgaatgaatgaatatcgtttatttttgtcaaaaaa 5146402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 12481093 - 12481024
Alignment:
Q  1 ttggatttgtattgtatcgatgtaatctatcaatttgaat----gaatatcgtttatttttatcgaaaaa 66  Q
    |||||||||||||||||||||||| | |||||||||||||    ||||||||||||||||| || |||||    
T  12481093 ttggatttgtattgtatcgatgtactttatcaatttgaatgaatgaatatcgtttatttttgtcaaaaaa 12481024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 15589839 - 15589770
Alignment:
Q  1 ttggatttgtattgtatcgatgtaatctatcaatttgaat----gaatatcgtttatttttatcgaaaaa 66  Q
    |||||||| ||||||||||||||| |||||||||||||||    ||||||||||||||||| || |||||    
T  15589839 ttggatttatattgtatcgatgtactctatcaatttgaatgaatgaatatcgtttatttttgtcaaaaaa 15589770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 5 - 66
Target Start/End: Original strand, 30813468 - 30813533
Alignment:
Q  5 atttgtattgtatcgatgtaatctatcaatt----tgaatgaatatcgtttatttttatcgaaaaa 66  Q
    |||||||||||||||||||| ||||||||||    |||||||||||||||||||||| || |||||    
T  30813468 atttgtattgtatcgatgtactctatcaatttgaatgaatgaatatcgtttatttttgtcaaaaaa 30813533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 5 - 66
Target Start/End: Original strand, 31705576 - 31705641
Alignment:
Q  5 atttgtattgtatcgatgtaatctatcaatt----tgaatgaatatcgtttatttttatcgaaaaa 66  Q
    |||||||||||||||||||| ||||||||||    |||||||||||||||||||||| || |||||    
T  31705576 atttgtattgtatcgatgtactctatcaatttaaatgaatgaatatcgtttatttttgtcaaaaaa 31705641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 35219627 - 35219558
Alignment:
Q  1 ttggatttgtattgtatcgatgtaatctatcaatttgaat----gaatatcgtttatttttatcgaaaaa 66  Q
    |||||||||||||||||||||||| |||| ||||||||||    ||||||||||||||||| || |||||    
T  35219627 ttggatttgtattgtatcgatgtactctaccaatttgaatgaatgaatatcgtttatttttgtcaaaaaa 35219558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 4394177 - 4394220
Alignment:
Q  1 ttggatttgtattgtatcgatgtaatctatcaatttgaatgaat 44  Q
    |||||||||||||||||| ||||| |||||||||||||||||||    
T  4394177 ttggatttgtattgtatcaatgtactctatcaatttgaatgaat 4394220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 4660835 - 4660895
Alignment:
Q  1 ttggatttgtattgtatcgatgtaatctatcaatttgaa----tgaatatcgtttattttt 57  Q
    ||||| |||||||||||||||||| ||||||||||||||    ||||||||||||||||||    
T  4660835 ttggaattgtattgtatcgatgtactctatcaatttgaatgaatgaatatcgtttattttt 4660895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 5 - 44
Target Start/End: Complemental strand, 6295959 - 6295920
Alignment:
Q  5 atttgtattgtatcgatgtaatctatcaatttgaatgaat 44  Q
    |||||||||||||||||||| |||||||||||||||||||    
T  6295959 atttgtattgtatcgatgtactctatcaatttgaatgaat 6295920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 5 - 44
Target Start/End: Complemental strand, 6302769 - 6302730
Alignment:
Q  5 atttgtattgtatcgatgtaatctatcaatttgaatgaat 44  Q
    |||||||||||||||||||| |||||||||||||||||||    
T  6302769 atttgtattgtatcgatgtactctatcaatttgaatgaat 6302730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 12654032 - 12653989
Alignment:
Q  1 ttggatttgtattgtatcgatgtaatctatcaatttgaatgaat 44  Q
    ||||| |||||||||||||||||| |||||||||||||||||||    
T  12654032 ttggaattgtattgtatcgatgtactctatcaatttgaatgaat 12653989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 5 - 58
Target Start/End: Complemental strand, 8694002 - 8693949
Alignment:
Q  5 atttgtattgtatcgatgtaatctatcaatttgaatgaatatcgtttattttta 58  Q
    ||||||||| |||| ||||| || |||||||||||||||||||||||| |||||    
T  8694002 atttgtattatatccatgtattcaatcaatttgaatgaatatcgtttactttta 8693949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 4 - 57
Target Start/End: Original strand, 4085086 - 4085143
Alignment:
Q  4 gatttgtattgtatcgatgtaatctatcaatt----tgaatgaatatcgtttattttt 57  Q
    ||||||||||||||||||||| |||||| |||    ||||||||||||||||||||||    
T  4085086 gatttgtattgtatcgatgtactctatcgatttgactgaatgaatatcgtttattttt 4085143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 21507568 - 21507499
Alignment:
Q  1 ttggatttgtattgtatcgatgtaatctatcaatttgaat----gaatatcgtttatttttatcgaaaaa 66  Q
    ||||||||||||||||| |||||| ||||||| |||||||    ||||||||||||||||| || |||||    
T  21507568 ttggatttgtattgtattgatgtactctatcagtttgaatgaatgaatatcgtttatttttgtcaaaaaa 21507499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 5 - 44
Target Start/End: Original strand, 8644618 - 8644657
Alignment:
Q  5 atttgtattgtatcgatgtaatctatcaatttgaatgaat 44  Q
    ||||| |||||||||||||| |||||||||||||||||||    
T  8644618 atttgcattgtatcgatgtactctatcaatttgaatgaat 8644657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 6 - 55
Target Start/End: Complemental strand, 4921617 - 4921564
Alignment:
Q  6 tttgtattgtatcgatgtaatctatcaatt----tgaatgaatatcgtttattt 55  Q
    ||||||| ||||||||||| ||||||||||    ||||||||||||||||||||    
T  4921617 tttgtatggtatcgatgtactctatcaatttaaatgaatgaatatcgtttattt 4921564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 45
Target Start/End: Original strand, 31748347 - 31748387
Alignment:
Q  5 atttgtattgtatcgatgtaatctatcaatttgaatgaata 45  Q
    ||||| ||| |||||||||| ||||||||||||||||||||    
T  31748347 atttgcattatatcgatgtactctatcaatttgaatgaata 31748387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 8 - 57
Target Start/End: Complemental strand, 31936340 - 31936287
Alignment:
Q  8 tgtattgtatcgatgtaatctatcaatttgaat----gaatatcgtttattttt 57  Q
    ||||||||||| ||||| |||||||||||||||    |||||||||||||||||    
T  31936340 tgtattgtatctatgtactctatcaatttgaatgaacgaatatcgtttattttt 31936287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 36)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 6681591 - 6681521
Alignment:
Q  1 ttggatttgtattgtatcgatgtaatctatcaatt----tgaatgaatatcgtttatttttatcgaaaaag 67  Q
    |||||||||||||||||||||||| ||||||||||    |||||||||||||||||||||| || ||||||    
T  6681591 ttggatttgtattgtatcgatgtactctatcaattagaatgaatgaatatcgtttatttttgtcaaaaaag 6681521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 17331735 - 17331804
Alignment:
Q  1 ttggatttgtattgtatcgatgtaatctatcaatt----tgaatgaatatcgtttatttttatcgaaaaa 66  Q
    |||||||||||||||||||||||| ||||||||||    |||||||||||||||||||||| || |||||    
T  17331735 ttggatttgtattgtatcgatgtactctatcaatttgaatgaatgaatatcgtttatttttgtcaaaaaa 17331804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 2555064 - 2555021
Alignment:
Q  1 ttggatttgtattgtatcgatgtaatctatcaatttgaatgaat 44  Q
    |||||||||||||||||||||||| |||||||||||||||||||    
T  2555064 ttggatttgtattgtatcgatgtactctatcaatttgaatgaat 2555021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 23881830 - 23881787
Alignment:
Q  1 ttggatttgtattgtatcgatgtaatctatcaatttgaatgaat 44  Q
    |||||||||||||||||||||||| |||||||||||||||||||    
T  23881830 ttggatttgtattgtatcgatgtactctatcaatttgaatgaat 23881787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 34431471 - 34431531
Alignment:
Q  1 ttggatttgtattgtatcgatgtaatctatcaatttgaa----tgaatatcgtttattttt 57  Q
    |||||||||||||||||||||||| ||||||||||||||    ||||||||||||||||||    
T  34431471 ttggatttgtattgtatcgatgtactctatcaatttgaatgaatgaatatcgtttattttt 34431531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 17732101 - 17732060
Alignment:
Q  1 ttggatttgtattgtatcgatgtaatctatcaatttgaatga 42  Q
    |||||||||||||||||||||||| |||||||||||||||||    
T  17732101 ttggatttgtattgtatcgatgtactctatcaatttgaatga 17732060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 42396224 - 42396162
Alignment:
Q  1 ttggatttgtattgtatcgatgtaatctatcaatttgaat----gaatatcgtttatttttat 59  Q
    ||||||||||||||||||||| || |||||||||||||||    |||||||||||||||||||    
T  42396224 ttggatttgtattgtatcgatatattctatcaatttgaatgaatgaatatcgtttatttttat 42396162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 39179559 - 39179490
Alignment:
Q  1 ttggatttgtattgtatcgatgtaatctatcaatttgaat----gaatatcgtttatttttatcgaaaaa 66  Q
    |||||||||||||||||||||||| | |||||||||||||    ||||||||||||||||| || |||||    
T  39179559 ttggatttgtattgtatcgatgtactttatcaatttgaatgaatgaatatcgtttatttttgtcaaaaaa 39179490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 177818 - 177775
Alignment:
Q  1 ttggatttgtattgtatcgatgtaatctatcaatttgaatgaat 44  Q
    |||||||||||||||||||||||| || ||||||||||||||||    
T  177818 ttggatttgtattgtatcgatgtactccatcaatttgaatgaat 177775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 5 - 44
Target Start/End: Complemental strand, 17095951 - 17095912
Alignment:
Q  5 atttgtattgtatcgatgtaatctatcaatttgaatgaat 44  Q
    |||||||||||||||||||| |||||||||||||||||||    
T  17095951 atttgtattgtatcgatgtactctatcaatttgaatgaat 17095912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 5 - 44
Target Start/End: Complemental strand, 17325388 - 17325349
Alignment:
Q  5 atttgtattgtatcgatgtaatctatcaatttgaatgaat 44  Q
    |||||||||| |||||||||||||||||||||||||||||    
T  17325388 atttgtattgcatcgatgtaatctatcaatttgaatgaat 17325349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 17699960 - 17700020
Alignment:
Q  1 ttggatttgtattgtatcgatgtaatctatcaatttg----aatgaatatcgtttattttt 57  Q
    |||||||||| ||||||||||||| ||||||||||||    ||||||||||||||||||||    
T  17699960 ttggatttgttttgtatcgatgtactctatcaatttgattcaatgaatatcgtttattttt 17700020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 28041036 - 28041079
Alignment:
Q  1 ttggatttgtattgtatcgatgtaatctatcaatttgaatgaat 44  Q
    ||||||||||||||||||||| || |||||||||||||||||||    
T  28041036 ttggatttgtattgtatcgatatactctatcaatttgaatgaat 28041079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 5 - 56
Target Start/End: Original strand, 39591438 - 39591489
Alignment:
Q  5 atttgtattgtatcgatgtaatctatcaatttgaatgaatatcgtttatttt 56  Q
    ||||||||||||| || ||| ||||||||||| |||||||||||||||||||    
T  39591438 atttgtattgtattgaggtactctatcaatttaaatgaatatcgtttatttt 39591489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 5 - 55
Target Start/End: Original strand, 32755498 - 32755547
Alignment:
Q  5 atttgtattgtatcgatgtaatctatcaatttgaatgaatatcgtttattt 55  Q
    ||||||||||||| ||| || ||||||||||||||||||||||||||||||    
T  32755498 atttgtattgtatggat-tactctatcaatttgaatgaatatcgtttattt 32755547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 4 - 45
Target Start/End: Complemental strand, 7771532 - 7771491
Alignment:
Q  4 gatttgtattgtatcgatgtaatctatcaatttgaatgaata 45  Q
    ||||||||||||||||||||| | ||||||||||||||||||    
T  7771532 gatttgtattgtatcgatgtactatatcaatttgaatgaata 7771491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 29098187 - 29098228
Alignment:
Q  1 ttggatttgtattgtatcgatgtaatctatcaatttgaatga 42  Q
    |||||||||||||||| ||||||| |||||||||||||||||    
T  29098187 ttggatttgtattgtaccgatgtattctatcaatttgaatga 29098228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 5 - 66
Target Start/End: Original strand, 6281455 - 6281520
Alignment:
Q  5 atttgtattgtatcgatgtaatctatcaatt----tgaatgaatatcgtttatttttatcgaaaaa 66  Q
    ||||||||||||||||| || ||||||||||    ||||||||||||||||| ||||||| |||||    
T  6281455 atttgtattgtatcgatatactctatcaatttgaatgaatgaatatcgtttacttttatcaaaaaa 6281520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 5 - 66
Target Start/End: Complemental strand, 11734555 - 11734490
Alignment:
Q  5 atttgtattgtatcgatgtaatctatcaatttgaat----gaatatcgtttatttttatcgaaaaa 66  Q
    |||||||||||||||||||| | |||||||||||||    ||||||||||||||||| || |||||    
T  11734555 atttgtattgtatcgatgtactttatcaatttgaatgaatgaatatcgtttatttttgtcaaaaaa 11734490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 5 - 45
Target Start/End: Complemental strand, 17566180 - 17566140
Alignment:
Q  5 atttgtattgtatcgatgtaatctatcaatttgaatgaata 45  Q
    |||||||| ||||| ||||||||||||||||||||||||||    
T  17566180 atttgtatagtatcaatgtaatctatcaatttgaatgaata 17566140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 4 - 44
Target Start/End: Complemental strand, 26294785 - 26294745
Alignment:
Q  4 gatttgtattgtatcgatgtaatctatcaatttgaatgaat 44  Q
    |||||||||||||||||| || |||||||||||||||||||    
T  26294785 gatttgtattgtatcgatatactctatcaatttgaatgaat 26294745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 5 - 57
Target Start/End: Complemental strand, 31254981 - 31254929
Alignment:
Q  5 atttgtattgtatcgatgtaatctatcaatttgaatgaatatcgtttattttt 57  Q
    |||||||||||||||  ||| ||||| ||||||||||||||||||| ||||||    
T  31254981 atttgtattgtatcgtcgtactctattaatttgaatgaatatcgttcattttt 31254929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 5 - 57
Target Start/End: Original strand, 6635659 - 6635715
Alignment:
Q  5 atttgtattgtatcgatgtaatctatcaatttgaatgaat----atcgtttattttt 57  Q
    |||| ||||||||||||||| |||||||||||||||||||    |||||||||||||    
T  6635659 atttatattgtatcgatgtactctatcaatttgaatgaatgaaaatcgtttattttt 6635715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 5 - 44
Target Start/End: Complemental strand, 9034669 - 9034630
Alignment:
Q  5 atttgtattgtatcgatgtaatctatcaatttgaatgaat 44  Q
    ||||| |||||||||||||| |||||||||||||||||||    
T  9034669 atttgcattgtatcgatgtactctatcaatttgaatgaat 9034630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 5 - 44
Target Start/End: Original strand, 17218113 - 17218152
Alignment:
Q  5 atttgtattgtatcgatgtaatctatcaatttgaatgaat 44  Q
    |||| ||||||||||||||| |||||||||||||||||||    
T  17218113 atttttattgtatcgatgtactctatcaatttgaatgaat 17218152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 18654189 - 18654232
Alignment:
Q  1 ttggatttgtattgtatcgatgtaatctatcaatttgaatgaat 44  Q
    |||||||| ||||||||| ||||| |||||||||||||||||||    
T  18654189 ttggatttatattgtatcaatgtagtctatcaatttgaatgaat 18654232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 20483593 - 20483653
Alignment:
Q  1 ttggatttgtattgtatcgatgtaatctatcaatttgaa----tgaatatcgtttattttt 57  Q
    ||||||||||||| |||||||||| ||||| ||||||||    ||||||||||||||||||    
T  20483593 ttggatttgtattatatcgatgtactctattaatttgaatgaatgaatatcgtttattttt 20483653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 39531122 - 39531079
Alignment:
Q  1 ttggatttgtattgtatcgatgtaatctatcaatttgaatgaat 44  Q
    |||||||  ||||||||||||||| |||||||||||||||||||    
T  39531122 ttggattcatattgtatcgatgtactctatcaatttgaatgaat 39531079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 5 - 44
Target Start/End: Complemental strand, 40564881 - 40564842
Alignment:
Q  5 atttgtattgtatcgatgtaatctatcaatttgaatgaat 44  Q
    |||||||||| ||||||||| |||||||||||||||||||    
T  40564881 atttgtattgcatcgatgtactctatcaatttgaatgaat 40564842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 5 - 44
Target Start/End: Complemental strand, 42505123 - 42505084
Alignment:
Q  5 atttgtattgtatcgatgtaatctatcaatttgaatgaat 44  Q
    ||||||||||||| |||||| |||||||||||||||||||    
T  42505123 atttgtattgtattgatgtactctatcaatttgaatgaat 42505084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 11 - 57
Target Start/End: Complemental strand, 8811870 - 8811824
Alignment:
Q  11 attgtatcgatgtaatctatcaatttgaatgaatatcgtttattttt 57  Q
    |||||||| ||||| |||||||||||||||||||||  |||||||||    
T  8811870 attgtatcaatgtactctatcaatttgaatgaatattatttattttt 8811824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 11 - 44
Target Start/End: Original strand, 28501085 - 28501118
Alignment:
Q  11 attgtatcgatgtaatctatcaatttgaatgaat 44  Q
    |||||||||||||| |||||||||||||||||||    
T  28501085 attgtatcgatgtactctatcaatttgaatgaat 28501118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 5 - 42
Target Start/End: Complemental strand, 29663085 - 29663048
Alignment:
Q  5 atttgtattgtatcgatgtaatctatcaatttgaatga 42  Q
    ||||||||| |||||||||| |||||||||||||||||    
T  29663085 atttgtattatatcgatgtactctatcaatttgaatga 29663048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 11 - 44
Target Start/End: Original strand, 40775157 - 40775190
Alignment:
Q  11 attgtatcgatgtaatctatcaatttgaatgaat 44  Q
    |||||||||||||| |||||||||||||||||||    
T  40775157 attgtatcgatgtactctatcaatttgaatgaat 40775190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 66
Target Start/End: Complemental strand, 33164179 - 33164114
Alignment:
Q  5 atttgtattgtatcgatgtaatctatcaatttgaat----gaatatcgtttatttttatcgaaaaa 66  Q
    ||||||||| |||||||||| ||| |||||||||||    ||||||||||||||||| || |||||    
T  33164179 atttgtattatatcgatgtactctgtcaatttgaatgaatgaatatcgtttatttttgtcaaaaaa 33164114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 66
Target Start/End: Original strand, 42781412 - 42781477
Alignment:
Q  5 atttgtattgtatcgatgtaatctatcaatttgaatgaata----tcgtttatttttatcgaaaaa 66  Q
    |||||||||||||||||| | ||||||||||||||| ||||    |||||||||||| || |||||    
T  42781412 atttgtattgtatcgatgcactctatcaatttgaataaataaatatcgtttatttttgtcaaaaaa 42781477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0155 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0155
Description:

Target: scaffold0155; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 35482 - 35551
Alignment:
Q  1 ttggatttgtattgtatcgatgtaatctatcaatt----tgaatgaatatcgtttatttttatcgaaaaa 66  Q
    |||||||||||||||||||||||| ||||||||||    |||||||||||||||||||||| || |||||    
T  35482 ttggatttgtattgtatcgatgtactctatcaatttgaatgaatgaatatcgtttatttttgtccaaaaa 35551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 48)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 12890831 - 12890762
Alignment:
Q  1 ttggatttgtattgtatcgatgtaatctatcaatttg----aatgaatatcgtttatttttatcgaaaaa 66  Q
    |||||||||||||||||||||||| ||||||||||||    |||||||||||||||||||| || |||||    
T  12890831 ttggatttgtattgtatcgatgtactctatcaatttgaattaatgaatatcgtttatttttgtcaaaaaa 12890762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 25068248 - 25068317
Alignment:
Q  1 ttggatttgtattgtatcgatgtaatctatcaatt----tgaatgaatatcgtttatttttatcgaaaaa 66  Q
    |||||||||||||||||||||||| ||||||||||    |||||||||||||||||||||| || |||||    
T  25068248 ttggatttgtattgtatcgatgtactctatcaatttgaatgaatgaatatcgtttatttttgtcaaaaaa 25068317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 34416477 - 34416408
Alignment:
Q  1 ttggatttgtattgtatcgatgtaatctatcaatt----tgaatgaatatcgtttatttttatcgaaaaa 66  Q
    |||||||||||||||||||||||| ||||||||||    |||||||||||||||||||||| || |||||    
T  34416477 ttggatttgtattgtatcgatgtactctatcaattcgaatgaatgaatatcgtttatttttgtcaaaaaa 34416408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 4739736 - 4739779
Alignment:
Q  1 ttggatttgtattgtatcgatgtaatctatcaatttgaatgaat 44  Q
    |||||||||||||||||||||||| |||||||||||||||||||    
T  4739736 ttggatttgtattgtatcgatgtactctatcaatttgaatgaat 4739779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 12705093 - 12705136
Alignment:
Q  1 ttggatttgtattgtatcgatgtaatctatcaatttgaatgaat 44  Q
    |||||||||||||||||||||||| |||||||||||||||||||    
T  12705093 ttggatttgtattgtatcgatgtactctatcaatttgaatgaat 12705136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 20560847 - 20560804
Alignment:
Q  1 ttggatttgtattgtatcgatgtaatctatcaatttgaatgaat 44  Q
    |||||||||||||||||||||||| |||||||||||||||||||    
T  20560847 ttggatttgtattgtatcgatgtactctatcaatttgaatgaat 20560804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 28261619 - 28261576
Alignment:
Q  1 ttggatttgtattgtatcgatgtaatctatcaatttgaatgaat 44  Q
    |||||||||||||||||||||||| |||||||||||||||||||    
T  28261619 ttggatttgtattgtatcgatgtactctatcaatttgaatgaat 28261576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 35333912 - 35333972
Alignment:
Q  1 ttggatttgtattgtatcgatgtaatctatcaatttgaa----tgaatatcgtttattttt 57  Q
    |||||||||||||||||||||||| ||||||||||||||    ||||||||||||||||||    
T  35333912 ttggatttgtattgtatcgatgtactctatcaatttgaatgaatgaatatcgtttattttt 35333972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 4 - 66
Target Start/End: Original strand, 3527396 - 3527462
Alignment:
Q  4 gatttgtattgtatcgatgtaatctatcaatt----tgaatgaatatcgtttatttttatcgaaaaa 66  Q
    ||||||||||||||||||||| ||||||||||    |||||||||||||||||||||| || |||||    
T  3527396 gatttgtattgtatcgatgtactctatcaatttgaatgaatgaatatcgtttatttttgtcaaaaaa 3527462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 4 - 66
Target Start/End: Complemental strand, 13878720 - 13878654
Alignment:
Q  4 gatttgtattgtatcgatgtaatctatcaatttgaat----gaatatcgtttatttttatcgaaaaa 66  Q
    ||||||||||||||||||||| |||||||||||||||    ||||||||||||||||| || |||||    
T  13878720 gatttgtattgtatcgatgtactctatcaatttgaatgaatgaatatcgtttatttttgtcaaaaaa 13878654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 4 - 66
Target Start/End: Complemental strand, 14018845 - 14018779
Alignment:
Q  4 gatttgtattgtatcgatgtaatctatcaatttgaat----gaatatcgtttatttttatcgaaaaa 66  Q
    ||||||||||||||||||||| |||||||||||||||    ||||||||||||||||| || |||||    
T  14018845 gatttgtattgtatcgatgtactctatcaatttgaatgaatgaatatcgtttatttttgtcaaaaaa 14018779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 17267840 - 17267771
Alignment:
Q  1 ttggatttgtattgtatcgatgtaatctatcaatttg----aatgaatatcgtttatttttatcgaaaaa 66  Q
    |||||||||||||||||| ||||| ||||||||||||    |||||||||||||||||||| || |||||    
T  17267840 ttggatttgtattgtatcaatgtactctatcaatttgaataaatgaatatcgtttatttttgtcaaaaaa 17267771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 4 - 44
Target Start/End: Original strand, 44942696 - 44942736
Alignment:
Q  4 gatttgtattgtatcgatgtaatctatcaatttgaatgaat 44  Q
    ||||||||||||||||||||| |||||||||||||||||||    
T  44942696 gatttgtattgtatcgatgtactctatcaatttgaatgaat 44942736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 4604030 - 4603987
Alignment:
Q  1 ttggatttgtattgtatcgatgtaatctatcaatttgaatgaat 44  Q
    ||||||||||||||||||||| || |||||||||||||||||||    
T  4604030 ttggatttgtattgtatcgatatactctatcaatttgaatgaat 4603987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 7071489 - 7071446
Alignment:
Q  1 ttggatttgtattgtatcgatgtaatctatcaatttgaatgaat 44  Q
    |||||||||||||||||| ||||| |||||||||||||||||||    
T  7071489 ttggatttgtattgtatcaatgtactctatcaatttgaatgaat 7071446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 5 - 44
Target Start/End: Original strand, 15920264 - 15920303
Alignment:
Q  5 atttgtattgtatcgatgtaatctatcaatttgaatgaat 44  Q
    |||||||||||||||||||| |||||||||||||||||||    
T  15920264 atttgtattgtatcgatgtactctatcaatttgaatgaat 15920303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 18089126 - 18089083
Alignment:
Q  1 ttggatttgtattgtatcgatgtaatctatcaatttgaatgaat 44  Q
    |||||||||||||||||||||||| | |||||||||||||||||    
T  18089126 ttggatttgtattgtatcgatgtactatatcaatttgaatgaat 18089083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 5 - 57
Target Start/End: Original strand, 29543204 - 29543260
Alignment:
Q  5 atttgtattgtatcgatgtaatctatcaatttgaa----tgaatatcgtttattttt 57  Q
    |||||||||||||||||||| ||||||||||||||    ||||||||||||||||||    
T  29543204 atttgtattgtatcgatgtactctatcaatttgaatgaatgaatatcgtttattttt 29543260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 32015660 - 32015703
Alignment:
Q  1 ttggatttgtattgtatcgatgtaatctatcaatttgaatgaat 44  Q
    ||||||||||||| |||||||||| |||||||||||||||||||    
T  32015660 ttggatttgtattatatcgatgtactctatcaatttgaatgaat 32015703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 5 - 57
Target Start/End: Original strand, 33012459 - 33012515
Alignment:
Q  5 atttgtattgtatcgatgtaatctatcaatttgaa----tgaatatcgtttattttt 57  Q
    |||||||||||||||||||| ||||||||||||||    ||||||||||||||||||    
T  33012459 atttgtattgtatcgatgtactctatcaatttgaatgaatgaatatcgtttattttt 33012515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 3 - 66
Target Start/End: Original strand, 34471365 - 34471432
Alignment:
Q  3 ggatttgtattgtatcgatgtaatctatcaatttgaatga----atatcgtttatttttatcgaaaaa 66  Q
    |||||||||||||||||||||| || ||||||||||||||    ||||||||||||||| || |||||    
T  34471365 ggatttgtattgtatcgatgtactccatcaatttgaatgaatgtatatcgtttatttttgtcaaaaaa 34471432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 4 - 66
Target Start/End: Original strand, 16136488 - 16136554
Alignment:
Q  4 gatttgtattgtatcgatgtaatctatcaatt----tgaatgaatatcgtttatttttatcgaaaaa 66  Q
    |||||||||| |||||||||| ||||||||||    |||||||||||||||||||||| || |||||    
T  16136488 gatttgtattatatcgatgtactctatcaatttgaatgaatgaatatcgtttatttttgtcaaaaaa 16136554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 4 - 66
Target Start/End: Original strand, 43696278 - 43696344
Alignment:
Q  4 gatttgtattgtatcgatgtaatctatcaatt----tgaatgaatatcgtttatttttatcgaaaaa 66  Q
    |||||||||||||| |||||| ||||||||||    |||||||||||||||||||||| || |||||    
T  43696278 gatttgtattgtattgatgtactctatcaatttgaatgaatgaatatcgtttatttttgtcaaaaaa 43696344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 5 - 66
Target Start/End: Original strand, 4703542 - 4703607
Alignment:
Q  5 atttgtattgtatcgatgtaatctatcaatt----tgaatgaatatcgtttatttttatcgaaaaa 66  Q
    |||||||||||||||||||| ||| ||||||    |||||||||||||||||||||| || |||||    
T  4703542 atttgtattgtatcgatgtactctgtcaatttggatgaatgaatatcgtttatttttgtcaaaaaa 4703607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 4732469 - 4732526
Alignment:
Q  1 ttggatttgtattgtatcgatgtaatctatcaatttg----aatgaatatcgtttatt 54  Q
    ||||||||||||||||| |||||| ||||||||||||    |||||||||||||||||    
T  4732469 ttggatttgtattgtattgatgtactctatcaatttgaattaatgaatatcgtttatt 4732526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 10286728 - 10286684
Alignment:
Q  1 ttggatttgtattgtatcgatgtaatctatcaatttgaatgaata 45  Q
    |||||||| |||||||| |||||| ||||||||||||||||||||    
T  10286728 ttggatttctattgtattgatgtactctatcaatttgaatgaata 10286684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 5 - 57
Target Start/End: Complemental strand, 11580855 - 11580803
Alignment:
Q  5 atttgtattgtatcgatgtaatctatcaatttgaatgaatatcgtttattttt 57  Q
    |||||||||||||||||||| || |||||||| ||| ||||||||||| ||||    
T  11580855 atttgtattgtatcgatgtactcaatcaatttaaataaatatcgtttactttt 11580803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 5 - 45
Target Start/End: Original strand, 15439883 - 15439923
Alignment:
Q  5 atttgtattgtatcgatgtaatctatcaatttgaatgaata 45  Q
    ||||||||| |||||||||||||||||||||| ||||||||    
T  15439883 atttgtattatatcgatgtaatctatcaatttaaatgaata 15439923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 4426373 - 4426330
Alignment:
Q  1 ttggatttgtattgtatcgatgtaatctatcaatttgaatgaat 44  Q
    ||||||||||| |||||||||||| ||||| |||||||||||||    
T  4426373 ttggatttgtactgtatcgatgtactctatgaatttgaatgaat 4426330  T

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Target: chr2; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 5 - 44
Target Start/End: Complemental strand, 5071094 - 5071055
Alignment:
Q  5 atttgtattgtatcgatgtaatctatcaatttgaatgaat 44  Q
    |||||||||| ||||||||| |||||||||||||||||||    
T  5071094 atttgtattgcatcgatgtactctatcaatttgaatgaat 5071055  T

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Target: chr2; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 5 - 44
Target Start/End: Original strand, 5754693 - 5754732
Alignment:
Q  5 atttgtattgtatcgatgtaatctatcaatttgaatgaat 44  Q
    ||||||||| |||||||||| |||||||||||||||||||    
T  5754693 atttgtattatatcgatgtattctatcaatttgaatgaat 5754732  T

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Target: chr2; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 9978392 - 9978349
Alignment:
Q  1 ttggatttgtattgtatcgatgtaatctatcaatttgaatgaat 44  Q
    |||||| |||||||||||||| || |||||||||||||||||||    
T  9978392 ttggatgtgtattgtatcgatatactctatcaatttgaatgaat 9978349  T

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Target: chr2; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 5 - 57
Target Start/End: Complemental strand, 11937576 - 11937520
Alignment:
Q  5 atttgtattgtatcgatgtaatctatcaatttg----aatgaatatcgtttattttt 57  Q
    |||||||||||||||||||| ||||||||||||    |||||||||| |||||||||    
T  11937576 atttgtattgtatcgatgtactctatcaatttggataaatgaatatcatttattttt 11937520  T

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Target: chr2; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 5 - 44
Target Start/End: Original strand, 27666578 - 27666617
Alignment:
Q  5 atttgtattgtatcgatgtaatctatcaatttgaatgaat 44  Q
    |||||||||||| ||||||| |||||||||||||||||||    
T  27666578 atttgtattgtaacgatgtactctatcaatttgaatgaat 27666617  T

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Target: chr2; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 5 - 57
Target Start/End: Complemental strand, 28230807 - 28230751
Alignment:
Q  5 atttgtattgtatcgatgtaatctatcaatttgaat----gaatatcgtttattttt 57  Q
    |||||||||||||||||||| |||| ||||||||||    |||||||||||||||||    
T  28230807 atttgtattgtatcgatgtactctaacaatttgaatgaacgaatatcgtttattttt 28230751  T

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Target: chr2; HSP #36
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 31908531 - 31908488
Alignment:
Q  1 ttggatttgtattgtatcgatgtaatctatcaatttgaatgaat 44  Q
    |||||||| |||||||| |||||| |||||||||||||||||||    
T  31908531 ttggatttctattgtattgatgtactctatcaatttgaatgaat 31908488  T

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Target: chr2; HSP #37
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 34962709 - 34962666
Alignment:
Q  1 ttggatttgtattgtatcgatgtaatctatcaatttgaatgaat 44  Q
    |||||||||||||||||  ||||| |||||||||||||||||||    
T  34962709 ttggatttgtattgtatttatgtactctatcaatttgaatgaat 34962666  T

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Target: chr2; HSP #38
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 5 - 44
Target Start/End: Original strand, 35354030 - 35354069
Alignment:
Q  5 atttgtattgtatcgatgtaatctatcaatttgaatgaat 44  Q
    |||||||||| ||||||||| |||||||||||||||||||    
T  35354030 atttgtattgcatcgatgtactctatcaatttgaatgaat 35354069  T

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Target: chr2; HSP #39
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 5 - 44
Target Start/End: Original strand, 44589283 - 44589322
Alignment:
Q  5 atttgtattgtatcgatgtaatctatcaatttgaatgaat 44  Q
    ||||||||||||||||| || |||||||||||||||||||    
T  44589283 atttgtattgtatcgatttattctatcaatttgaatgaat 44589322  T

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Target: chr2; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 13740368 - 13740326
Alignment:
Q  1 ttggatttgtattgtatcgatgtaatctatcaatttgaatgaa 43  Q
    ||||||||||||||||| |||||| | ||||||||||||||||    
T  13740368 ttggatttgtattgtattgatgtactttatcaatttgaatgaa 13740326  T

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Target: chr2; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 6 - 44
Target Start/End: Original strand, 32314837 - 32314875
Alignment:
Q  6 tttgtattgtatcgatgtaatctatcaatttgaatgaat 44  Q
    ||||||||||||||||||| | |||||||||||||||||    
T  32314837 tttgtattgtatcgatgtactttatcaatttgaatgaat 32314875  T

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Target: chr2; HSP #42
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 11 - 44
Target Start/End: Original strand, 12366264 - 12366297
Alignment:
Q  11 attgtatcgatgtaatctatcaatttgaatgaat 44  Q
    |||||||||||||| |||||||||||||||||||    
T  12366264 attgtatcgatgtactctatcaatttgaatgaat 12366297  T

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Target: chr2; HSP #43
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 11 - 44
Target Start/End: Original strand, 26491697 - 26491730
Alignment:
Q  11 attgtatcgatgtaatctatcaatttgaatgaat 44  Q
    |||||||||||||| |||||||||||||||||||    
T  26491697 attgtatcgatgtattctatcaatttgaatgaat 26491730  T

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Target: chr2; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 54
Target Start/End: Complemental strand, 11798248 - 11798195
Alignment:
Q  5 atttgtattgtatcgatgtaatctatcaatt----tgaatgaatatcgtttatt 54  Q
    ||||| |||||||||||||| ||||||||||    |||||||||||||||||||    
T  11798248 atttgaattgtatcgatgtactctatcaatttaaatgaatgaatatcgtttatt 11798195  T

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Target: chr2; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 45
Target Start/End: Complemental strand, 27023863 - 27023823
Alignment:
Q  5 atttgtattgtatcgatgtaatctatcaatttgaatgaata 45  Q
    ||||||||| |||||||||| |||||| |||||||||||||    
T  27023863 atttgtattatatcgatgtactctatcgatttgaatgaata 27023823  T

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Target: chr2; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 66
Target Start/End: Original strand, 27096100 - 27096165
Alignment:
Q  5 atttgtattgtatcgatgtaatctatcaatt----tgaatgaatatcgtttatttttatcgaaaaa 66  Q
    |||||||||||||| ||||| || |||||||    |||||||||||||||||||||| || |||||    
T  27096100 atttgtattgtatctatgtactccatcaatttgaatgaatgaatatcgtttatttttgtcaaaaaa 27096165  T

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Target: chr2; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 66
Target Start/End: Complemental strand, 38384176 - 38384111
Alignment:
Q  5 atttgtattgtatcgatgtaatctatcaatttgaat----gaatatcgtttatttttatcgaaaaa 66  Q
    |||||||||||||||||||  | |||||||||||||    ||||||||||||||||| || |||||    
T  38384176 atttgtattgtatcgatgtgctttatcaatttgaatgaatgaatatcgtttatttttgtcaaaaaa 38384111  T

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Target: chr2; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 44
Target Start/End: Complemental strand, 38535015 - 38534976
Alignment:
Q  4 gatttgtattgtatcgatgtaatctatcaatttgaatgaat 44  Q
    ||||||||||||||| ||||| |||||||||||||||||||    
T  38535015 gatttgtattgtatc-atgtactctatcaatttgaatgaat 38534976  T

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Target: scaffold0294 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 1)
Name: scaffold0294
Description:

Target: scaffold0294; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 3781 - 3738
Alignment:
Q  1 ttggatttgtattgtatcgatgtaatctatcaatttgaatgaat 44  Q
    |||||||||||||||||||||||| |||||||||||||||||||    
T  3781 ttggatttgtattgtatcgatgtactctatcaatttgaatgaat 3738  T

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Target: scaffold0056 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 74571 - 74640
Alignment:
Q  1 ttggatttgtattgtatcgatgtaatctatcaatt----tgaatgaatatcgtttatttttatcgaaaaa 66  Q
    |||||||||||||||||||||||| ||||||||||    | |||||||||||||||||||| || |||||    
T  74571 ttggatttgtattgtatcgatgtactctatcaatttaaataaatgaatatcgtttatttttgtcaaaaaa 74640  T

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Target: scaffold0536 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0536
Description:

Target: scaffold0536; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 5 - 71
Target Start/End: Original strand, 3306 - 3376
Alignment:
Q  5 atttgtattgtatcgatgtaatctatcaatt----tgaatgaatatcgtttatttttatcgaaaaagaaag 71  Q
    |||| ||||||||||||||| ||||||||||    |||||||||||||||||||||| || ||||| ||||    
T  3306 atttatattgtatcgatgtactctatcaatttgaatgaatgaatatcgtttatttttgtcaaaaaaaaaag 3376  T

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Target: scaffold0432 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0432
Description:

Target: scaffold0432; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 5 - 44
Target Start/End: Complemental strand, 2158 - 2119
Alignment:
Q  5 atttgtattgtatcgatgtaatctatcaatttgaatgaat 44  Q
    |||||||||||||||||||| | |||||||||||||||||    
T  2158 atttgtattgtatcgatgtactttatcaatttgaatgaat 2119  T

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Target: scaffold0288 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0288
Description:

Target: scaffold0288; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 21000 - 21060
Alignment:
Q  1 ttggatttgtattgtatcgatgtaatctatcaatttgaatgaat----atcgtttattttt 57  Q
    ||||| |||||||| ||||||||| |||||||||||||||||||    |||||||||||||    
T  21000 ttggaattgtattggatcgatgtactctatcaatttgaatgaatgaaaatcgtttattttt 21060  T

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Target: scaffold0001 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 5 - 44
Target Start/End: Complemental strand, 403958 - 403919
Alignment:
Q  5 atttgtattgtatcgatgtaatctatcaatttgaatgaat 44  Q
    |||||||||||||||||||| ||||| |||||||||||||    
T  403958 atttgtattgtatcgatgtactctattaatttgaatgaat 403919  T

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Target: scaffold0321 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0321
Description:

Target: scaffold0321; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 5 - 39
Target Start/End: Complemental strand, 6840 - 6806
Alignment:
Q  5 atttgtattgtatcgatgtaatctatcaatttgaa 39  Q
    |||||||||||||||||||| ||||||||||||||    
T  6840 atttgtattgtatcgatgtactctatcaatttgaa 6806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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