View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF3301_low_28 (Length: 216)
Name: NF3301_low_28
Description: NF3301
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3301_low_28 |
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Alignment Details
Target: chr2 (Bit Score: 177; Significance: 1e-95; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 177; E-Value: 1e-95
Query Start/End: Original strand, 15 - 203
Target Start/End: Original strand, 12868495 - 12868683
Alignment:
| Q |
15 |
aatatcttgaagcaacccattatctcttaacaaagcctcattaacaaaccctgaagatccaaaacctcgatgattaatcacttggtcattcacaaaacca |
114 |
Q |
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| T |
12868495 |
aatatcttgaagcaacccattatctcttaacaaagcctcattaacaaaccctgaagatccaaaacctcgatgattaatcacttggtcattcgcaaaacca |
12868594 |
T |
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| Q |
115 |
ccaaacgacgacgtgttaacataactaccactagaaccaccaacataattagaagaagggggtgtagtagtagtagtaatattattatt |
203 |
Q |
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| T |
12868595 |
ccaaacgacgacgtgttaacacaactaccaccagaaccaccaacataattagaagaagggggtgtagtagtagtagtaatattattatt |
12868683 |
T |
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