View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF3302_low_3 (Length: 470)
Name: NF3302_low_3
Description: NF3302
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3302_low_3 |
 | |
|
| [»] scaffold0692 (1 HSPs) |
| | |
|
Alignment Details
Target: chr7 (Bit Score: 439; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 439; E-Value: 0
Query Start/End: Original strand, 17 - 467
Target Start/End: Original strand, 29622902 - 29623352
Alignment:
| Q |
17 |
acttaccaggaggaacatatcctatagttcccttaattgtggaagaagtaatttgatcattacttgaatggtttgaggatccatgaatgagcctagctaa |
116 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |
|
|
| T |
29622902 |
acttaccaggaggaacatatcctatagttcccttaattgtggaagaagtaatttgatcattacttgaatggtttgaggatccattaatgagcctagctaa |
29623001 |
T |
|
| Q |
117 |
tccaaagtctcccaagtgggctacaatgtcatcatcaagaagaacattgcttggcttaacatcacagtgaactacagcttgttctatatcattgtgaaga |
216 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
29623002 |
tccaaagtctcccaagtgggctacaatgtcatcatcaagaagaacattgcttggcttaacatcacagtgaactacagcttgttctatatcattgtgaaga |
29623101 |
T |
|
| Q |
217 |
taatccaatgcatgagctacatcaagagcaatgtctatcctttgtgtgaggttgagattatggcttccagatccttcattatcgtgcaacatcttttcta |
316 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
29623102 |
taatccaatgcatgagctacatcaagagcaatgtctatcctttgtgtgaggttgagattatggcttccagatccttcattatcgtgcaacatcttttcta |
29623201 |
T |
|
| Q |
317 |
gactcatattaggcatgaactcaaaaacaatagccttgaaatcttcacctttataatcaacacttgaacaacaagttaggatcttgacaagattccggtg |
416 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
29623202 |
gactcatattaggcatgaactcaaaaacaatagccttgaaatcttcacctttataatcaacacttgaacaacaagttaggatcttgacaagattccggtg |
29623301 |
T |
|
| Q |
417 |
tttcatctttcctagagatttacattctgcaatgaaactctctgctcctcc |
467 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||| |||| |||| |
|
|
| T |
29623302 |
tttcatctttcctagagatttacattctgcaatgaaactctttgctgctcc |
29623352 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 270; Significance: 1e-150; HSPs: 13)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 270; E-Value: 1e-150
Query Start/End: Original strand, 19 - 428
Target Start/End: Complemental strand, 35755228 - 35754819
Alignment:
| Q |
19 |
ttaccaggaggaacatatcctatagttcccttaattgtggaagaagtaatttgatcattacttgaatggtttgaggatccatgaatgagcctagctaatc |
118 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||| || ||| ||| |||||| ||||||||||| | || | |||||||||||||||||||| | |
|
|
| T |
35755228 |
ttaccaggaggaacatatcctatagttcccttaattgtagaggaattaacttgatctttacttgaatgttctgtagctccatgaatgagcctagctaggc |
35755129 |
T |
|
| Q |
119 |
caaagtctcccaagtgggctacaatgtcatcatcaagaagaacattgcttggcttaacatcacagtgaactacagcttgttctatatcattgtgaagata |
218 |
Q |
| |
|
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||| |||||||| |||||||||||||||| |
|
|
| T |
35755128 |
caaagtctcccaagtgggctacaatttcatcatcaagaagaacattgcttggcttaatatcacagtgaactacgacttgttctgtatcattgtgaagata |
35755029 |
T |
|
| Q |
219 |
atccaatgcatgagctacatcaagagcaatgtctatcctttgtgtgaggttgagattatggcttccagatccttcattatcgtgcaacatcttttctaga |
318 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||| || ||||||||||||||||||| |||||| ||| |
|
|
| T |
35755028 |
atccaatgcatgagctacatcaagagcaatgtctaacctttgtgtgaggttgagattaaaatttcctgacccttcattatcgtgcaacaacttttcaaga |
35754929 |
T |
|
| Q |
319 |
ctcatattaggcatgaactcaaaaacaatagccttgaaatcttcacctttataatcaacacttgaacaacaagttaggatcttgacaagattccggtgtt |
418 |
Q |
| |
|
||| ||| | ||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||| | |
|
|
| T |
35754928 |
ctcccatttgacatgaactcaaaaacaatagctttgaaatcttcaccattataatcaacacttgaacaacaagttaaaatcttgacaagattccggtgct |
35754829 |
T |
|
| Q |
419 |
tcatctttcc |
428 |
Q |
| |
|
|||||||||| |
|
|
| T |
35754828 |
tcatctttcc |
35754819 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 245; E-Value: 1e-136
Query Start/End: Original strand, 19 - 467
Target Start/End: Complemental strand, 35386426 - 35385978
Alignment:
| Q |
19 |
ttaccaggaggaacatatcctatagttcccttaattgtggaagaagtaatttgatcattacttgaatggtttgaggatccatgaatgagcctagctaatc |
118 |
Q |
| |
|
||||||||||||| ||||||||||||||| ||||| || || ||| ||| |||||| ||||||||||| | || || |||| |||||| |||||| || | |
|
|
| T |
35386426 |
ttaccaggaggaatatatcctatagttcctttaatagtagaggaaataacttgatctttacttgaatgctctgtggttccaagaatgatcctagccaagc |
35386327 |
T |
|
| Q |
119 |
caaagtctcccaagtgggctacaatgtcatcatcaagaagaacattgcttggcttaacatcacagtgaactacagcttgttctatatcattgtgaagata |
218 |
Q |
| |
|
|||||||||||||||||||||||| |||||| ||||||||||| ||||||||||||| ||||||||||||||| ||||| ||| |||||||||||||||| |
|
|
| T |
35386326 |
caaagtctcccaagtgggctacaaagtcatcgtcaagaagaacgttgcttggcttaagatcacagtgaactacggcttgctctgtatcattgtgaagata |
35386227 |
T |
|
| Q |
219 |
atccaatgcatgagctacatcaagagcaatgtctatcctttgtgtgaggttgagattatggcttccagatccttcattatcgtgcaacatcttttctaga |
318 |
Q |
| |
|
||| | ||||||||||||||||||||||||||||| ||||| |||||||||||||||||| || |||| |||||||||| |||||| | |||||| ||| |
|
|
| T |
35386226 |
atcaagtgcatgagctacatcaagagcaatgtctaacctttatgtgaggttgagattatgattttcagacccttcattattgtgcaaaaacttttcaaga |
35386127 |
T |
|
| Q |
319 |
ctcatattaggcatgaactcaaaaacaatagccttgaaatcttcacctttataatcaacacttgaacaacaagttaggatcttgacaagattccggtgtt |
418 |
Q |
| |
|
||| ||| | |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||| ||||||||||||| |||| | |
|
|
| T |
35386126 |
ctctcatttgacatgaactcaaaaacaatagccttgaaatcttcacccttataatcaacacttgaacaacaggttaggaccttgacaagattctggtgct |
35386027 |
T |
|
| Q |
419 |
tcatctttcctagagatttacattctgcaatgaaactctctgctcctcc |
467 |
Q |
| |
|
|||||||||| |||| || |||||||| |||||||||| |||| |||| |
|
|
| T |
35386026 |
tcatctttcccagagcattgcattctgccatgaaactctttgctgctcc |
35385978 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 235; E-Value: 1e-130
Query Start/End: Original strand, 19 - 457
Target Start/End: Complemental strand, 35411087 - 35410649
Alignment:
| Q |
19 |
ttaccaggaggaacatatcctatagttcccttaattgtggaagaagtaatttgatcattacttgaatggtttgaggatccatgaatgagcctagctaatc |
118 |
Q |
| |
|
||||||||||||| ||||||||||||||| |||||||| ||| || ||| |||||| ||||||||||| | || || |||| ||||||||||||| || | |
|
|
| T |
35411087 |
ttaccaggaggaatatatcctatagttcctttaattgtagaaaaaataacttgatctttacttgaatgctctgtggttccaagaatgagcctagccaagc |
35410988 |
T |
|
| Q |
119 |
caaagtctcccaagtgggctacaatgtcatcatcaagaagaacattgcttggcttaacatcacagtgaactacagcttgttctatatcattgtgaagata |
218 |
Q |
| |
|
|||||||||||||||||||||||| |||||| ||||||||||| ||||| ||||||| ||||||||||||||||||||| ||| | |||||||||||||| |
|
|
| T |
35410987 |
caaagtctcccaagtgggctacaaagtcatcgtcaagaagaacgttgctcggcttaagatcacagtgaactacagcttgctctgtctcattgtgaagata |
35410888 |
T |
|
| Q |
219 |
atccaatgcatgagctacatcaagagcaatgtctatcctttgtgtgaggttgagattatggcttccagatccttcattatcgtgcaacatcttttctaga |
318 |
Q |
| |
|
||| | ||||||||||||||||||||||||||||| |||||||||||||||||||||||| || |||| ||||| ||||| ||||| | |||||||||| |
|
|
| T |
35410887 |
atcaagtgcatgagctacatcaagagcaatgtctaacctttgtgtgaggttgagattatgattttcagacccttcgttatcatgcaaaaacttttctaga |
35410788 |
T |
|
| Q |
319 |
ctcatattaggcatgaactcaaaaacaatagccttgaaatcttcacctttataatcaacacttgaacaacaagttaggatcttgacaagattccggtgtt |
418 |
Q |
| |
|
|| ||||||||| ||||||||||||||||||||||| |||||||| ||||||||||||||||||||||| |||||||| ||||||||||| ||||| |
|
|
| T |
35410787 |
ttcccattaggcattaactcaaaaacaatagccttgaactcttcaccattataatcaacacttgaacaacacgttaggattttgacaagattacggtgcc |
35410688 |
T |
|
| Q |
419 |
tcatctttcctagagatttacattctgcaatgaaactct |
457 |
Q |
| |
|
||||||||| || || || ||||| || |||||||||| |
|
|
| T |
35410687 |
tcatctttcttaaagcattgcattccgccatgaaactct |
35410649 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 233; E-Value: 1e-128
Query Start/End: Original strand, 19 - 467
Target Start/End: Complemental strand, 35367274 - 35366826
Alignment:
| Q |
19 |
ttaccaggaggaacatatcctatagttcccttaattgtggaagaagtaatttgatcattacttgaatggtttgaggatccatgaatgagcctagctaatc |
118 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||| ||| |||||| ||||||||||||| | || |||| |||||||||||||||| | |
|
|
| T |
35367274 |
ttaccaggaggaacatatcctatagttcccttaattgtggaagaattaacttgatctttacttgaatggtctctggttccaagaatgagcctagctaagc |
35367175 |
T |
|
| Q |
119 |
caaagtctcccaagtgggctacaatgtcatcatcaagaagaacattgcttggcttaacatcacagtgaactacagcttgttctatatcattgtgaagata |
218 |
Q |
| |
|
||||||||||||||||||||||| ||||||| || |||||||| ||||| ||||||| |||||||||||||| | || ||| || ||||||||||||| |
|
|
| T |
35367174 |
caaagtctcccaagtgggctacagtgtcatcgtccagaagaacgttgctcggcttaatatcacagtgaactatggatttctctgtaccattgtgaagata |
35367075 |
T |
|
| Q |
219 |
atccaatgcatgagctacatcaagagcaatgtctatcctttgtgtgaggttgagattatggcttccagatccttcattatcgtgcaacatcttttctaga |
318 |
Q |
| |
|
||| | ||||||||||||||||||||||||||| | || ||| ||||| |||||||||| ||||||| ||||| ||||| |||| | |||||||||| |
|
|
| T |
35367074 |
atcgagtgcatgagctacatcaagagcaatgtcaactctgtgtctgaggctgagattatgatttccagacccttcgttatcatgcagaagcttttctaga |
35366975 |
T |
|
| Q |
319 |
ctcatattaggcatgaactcaaaaacaatagccttgaaatcttcacctttataatcaacacttgaacaacaagttaggatcttgacaagattccggtgtt |
418 |
Q |
| |
|
|| |||||||||||||||||||||||||||||||| |||||||| |||||||||| |||||||||||||||||||||||||||||||| ||||| | |
|
|
| T |
35366974 |
cttcccttaggcatgaactcaaaaacaatagccttgaactcttcacccttataatcaatgcttgaacaacaagttaggatcttgacaagatttcggtgct |
35366875 |
T |
|
| Q |
419 |
tcatctttcctagagatttacattctgcaatgaaactctctgctcctcc |
467 |
Q |
| |
|
||||||||||||||| || ||||||||| ||||||||| |||| |||| |
|
|
| T |
35366874 |
tcatctttcctagagcttcacattctgctttgaaactctttgctgctcc |
35366826 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #5
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 19 - 467
Target Start/End: Complemental strand, 35376826 - 35376372
Alignment:
| Q |
19 |
ttaccaggaggaacatatcctatagttcccttaattgtggaagaagtaatttgatcattacttgaatggtttgaggatccatgaatgagcctagctaatc |
118 |
Q |
| |
|
||||||||||||| ||||||||||||||| ||||||||||| ||| ||| ||||| |||||||||| | || | |||||| | || ||||||||| | |
|
|
| T |
35376826 |
ttaccaggaggaatatatcctatagttcctttaattgtggaggaaataacttgatttttacttgaatattctgtagctccatggaggaacctagctaagc |
35376727 |
T |
|
| Q |
119 |
caaagtctcccaagtgggctacaatgtcatcatcaagaagaacattgcttggcttaacatcacagtgaactacagcttgttctatatcattgtgaagata |
218 |
Q |
| |
|
|||||||||| |||||||| ||| ||||||||||||||||||||||||||||||||||||||| ||||||||| |||| ||| |||||||||||||||| |
|
|
| T |
35376726 |
caaagtctcctaagtgggccacaccgtcatcatcaagaagaacattgcttggcttaacatcacaatgaactacaacttgctctgtatcattgtgaagata |
35376627 |
T |
|
| Q |
219 |
atccaatgcatgagctacatcaagagcaatgtctatcctttgtgtgaggttgagattatggcttccaga-tc-----cttcattatcgtgcaacatcttt |
312 |
Q |
| |
|
|||||||||||||||||| || ||||||||||||| ||||||||||| |||||||| | ||| ||| || |||| ||| | ||||||| ||| |
|
|
| T |
35376626 |
atccaatgcatgagctacgtcgagagcaatgtctaacctttgtgtgaaattgagattcagatttctagactcatgatcttcgttaccatgcaacaggttt |
35376527 |
T |
|
| Q |
313 |
tctagactcatattaggcatgaactcaaaaacaatagccttgaaatcttcacctttataatcaacacttgaacaacaagttaggatcttgacaagattcc |
412 |
Q |
| |
|
|| ||| || | |||||||||||||||||||||| ||||| ||||||||||| |||||||||||||||||||||||||||||||| ||||||||||| | |
|
|
| T |
35376526 |
tccagattcccactaggcatgaactcaaaaacaatggccttaaaatcttcaccattataatcaacacttgaacaacaagttaggattttgacaagattac |
35376427 |
T |
|
| Q |
413 |
ggtgtttcatctttcctagagatttacattctgcaatgaaactctctgctcctcc |
467 |
Q |
| |
|
|||| ||||||||||||| || || ||||| ||||||||||||| |||| |||| |
|
|
| T |
35376426 |
ggtgcttcatctttcctaaagcattgcattccgcaatgaaactctttgctgctcc |
35376372 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #6
Raw Score: 171; E-Value: 1e-91
Query Start/End: Original strand, 19 - 467
Target Start/End: Complemental strand, 35424085 - 35423631
Alignment:
| Q |
19 |
ttaccaggaggaacatatcctatagttcccttaattgtggaagaagtaatttgatcattacttgaatggtttgaggatccatgaatgagcctagctaatc |
118 |
Q |
| |
|
||||||||||||| ||||||||||||||| ||||||||||| ||| ||| ||||| |||||||||| | || | |||||| | || |||||||| | |
|
|
| T |
35424085 |
ttaccaggaggaatatatcctatagttcctttaattgtggaggaaataacttgatttttacttgaatattctgtagctccatggaggaacctagctacgc |
35423986 |
T |
|
| Q |
119 |
caaagtctcccaagtgggctacaatgtcatcatcaagaagaacattgcttggcttaacatcacagtgaactacagcttgttctatatcattgtgaagata |
218 |
Q |
| |
|
|||||||||| ||||||| ||| ||||||||||||||||||||||||||| ||||||||||| ||||||||| |||| ||| |||||||||||||||| |
|
|
| T |
35423985 |
caaagtctcctaagtgggtcacaccgtcatcatcaagaagaacattgcttggtttaacatcacaatgaactacaacttgctctgtatcattgtgaagata |
35423886 |
T |
|
| Q |
219 |
atccaatgcatgagctacatcaagagcaatgtctatcctttgtgtgaggttgagattatggcttccaga-tc-----cttcattatcgtgcaacatcttt |
312 |
Q |
| |
|
|||||||||||||||||| || ||||||||||||| ||||||||||| |||||||| | ||| ||| || |||| ||| | ||||||| ||| |
|
|
| T |
35423885 |
atccaatgcatgagctacgtcgagagcaatgtctaacctttgtgtgaaattgagattcagatttctagactcatgatcttcgttaccatgcaacaggttt |
35423786 |
T |
|
| Q |
313 |
tctagactcatattaggcatgaactcaaaaacaatagccttgaaatcttcacctttataatcaacacttgaacaacaagttaggatcttgacaagattcc |
412 |
Q |
| |
|
|||||| || | |||||||||||||||||||||| ||||| ||||||||||| |||||||||||||||||||| ||||||||||| || |||||||| | |
|
|
| T |
35423785 |
tctagattcccactaggcatgaactcaaaaacaatggccttaaaatcttcaccattataatcaacacttgaacagcaagttaggattttcacaagattac |
35423686 |
T |
|
| Q |
413 |
ggtgtttcatctttcctagagatttacattctgcaatgaaactctctgctcctcc |
467 |
Q |
| |
|
|||| ||||||||||||| || || ||||| | |||||||||| |||| |||| |
|
|
| T |
35423685 |
ggtgcttcatctttcctaaagcattgcattccaccatgaaactctttgctgctcc |
35423631 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #7
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 301 - 430
Target Start/End: Complemental strand, 35370379 - 35370249
Alignment:
| Q |
301 |
tgcaacatcttttctagactcatattaggcatgaactcaaaaacaatagccttgaaa-tcttcacctttataatcaacacttgaacaacaagttaggatc |
399 |
Q |
| |
|
|||||||| ||||||| |||| ||| ||||||||||||||||||||||||||| || |||||||| ||||||||||||||||| ||||| |||||||| |
|
|
| T |
35370379 |
tgcaacatgttttctaaactcccattgggcatgaactcaaaaacaatagccttggaactcttcaccattataatcaacacttgagcaacacgttaggatt |
35370280 |
T |
|
| Q |
400 |
ttgacaagattccggtgtttcatctttccta |
430 |
Q |
| |
|
||||||||||| ||||| |||||||||||| |
|
|
| T |
35370279 |
ttgacaagattacggtgcctcatctttccta |
35370249 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #8
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 112 - 426
Target Start/End: Complemental strand, 35437334 - 35437020
Alignment:
| Q |
112 |
gctaatccaaagtctcccaagtgggctacaatgtcatcatcaagaagaacattgcttggcttaacatcacagtgaactacagcttgttctatatcattgt |
211 |
Q |
| |
|
||||| ||||| ||||| |||| || | ||||||||| || ||||||||||| |||||||||| |||||||||||||||||||| | || || || |
|
|
| T |
35437334 |
gctaacccaaaatctcctaagtaagcaataatgtcatcgtcgagaagaacattacttggcttaatatcacagtgaactacagcttcatgggaattatggt |
35437235 |
T |
|
| Q |
212 |
gaagataatccaatgcatgagctacatcaagagcaatgtctatcctttgtgtgaggttgagatta-tggcttccagatccttcattatcgtgcaacatct |
310 |
Q |
| |
|
||||||||||||||||||| |||||||| ||||||| || ||||||| |||| || ||||| | | || |||| |||||||| |||||||| |
|
|
| T |
35437234 |
gaagataatccaatgcatgggctacatcgagagcaacacttaacctttgtctgagatttagatttctagactcaagatg-ttcattattgtgcaacaagc |
35437136 |
T |
|
| Q |
311 |
tttctagactcatattaggcatgaactcaaaaacaatagccttgaaatcttcacctttataatcaacacttgaacaacaagttaggatcttgacaagatt |
410 |
Q |
| |
|
|||||||||| |||||||||| |||||||| |||||||||||| ||||||| |||||||||| ||||||||| ||||||||| ||| | ||| || |
|
|
| T |
35437135 |
cttctagactccccataggcatgaattcaaaaactatagccttgaaaacttcaccattataatcaatacttgaacagaaagttaggagcttcagaaggtt |
35437036 |
T |
|
| Q |
411 |
ccggtgtttcatcttt |
426 |
Q |
| |
|
||||||||||||| |
|
|
| T |
35437035 |
tttgtgtttcatcttt |
35437020 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #9
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 160 - 224
Target Start/End: Complemental strand, 35388544 - 35388480
Alignment:
| Q |
160 |
acattgcttggcttaacatcacagtgaactacagcttgttctatatcattgtgaagataatccaa |
224 |
Q |
| |
|
|||||| ||||||||| |||||| |||||||||||||| || | || |||||||||||||||||| |
|
|
| T |
35388544 |
acattgtttggcttaatatcacaatgaactacagcttgctcaaaattattgtgaagataatccaa |
35388480 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #10
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 142 - 187
Target Start/End: Original strand, 10716902 - 10716947
Alignment:
| Q |
142 |
atgtcatcatcaagaagaacattgcttggcttaacatcacagtgaa |
187 |
Q |
| |
|
||||||||||||||||| |||||||||||||||| |||||| |||| |
|
|
| T |
10716902 |
atgtcatcatcaagaaggacattgcttggcttaagatcacaatgaa |
10716947 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #11
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 142 - 187
Target Start/End: Original strand, 10746977 - 10747022
Alignment:
| Q |
142 |
atgtcatcatcaagaagaacattgcttggcttaacatcacagtgaa |
187 |
Q |
| |
|
||||||||||||||||| |||||||||||||| | ||||||||||| |
|
|
| T |
10746977 |
atgtcatcatcaagaaggacattgcttggcttgagatcacagtgaa |
10747022 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #12
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 142 - 187
Target Start/End: Original strand, 10740661 - 10740706
Alignment:
| Q |
142 |
atgtcatcatcaagaagaacattgcttggcttaacatcacagtgaa |
187 |
Q |
| |
|
||||||||||||||||| |||||||||||||| | |||||| |||| |
|
|
| T |
10740661 |
atgtcatcatcaagaaggacattgcttggctttagatcacaatgaa |
10740706 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #13
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 142 - 187
Target Start/End: Original strand, 10763095 - 10763140
Alignment:
| Q |
142 |
atgtcatcatcaagaagaacattgcttggcttaacatcacagtgaa |
187 |
Q |
| |
|
||||||||||||||||| |||||||||||||| | |||||| |||| |
|
|
| T |
10763095 |
atgtcatcatcaagaaggacattgcttggctttagatcacaatgaa |
10763140 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 245; Significance: 1e-136; HSPs: 3)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 245; E-Value: 1e-136
Query Start/End: Original strand, 19 - 467
Target Start/End: Original strand, 10420350 - 10420798
Alignment:
| Q |
19 |
ttaccaggaggaacatatcctatagttcccttaattgtggaagaagtaatttgatcattacttgaatggtttgaggatccatgaatgagcctagctaatc |
118 |
Q |
| |
|
|||||||||||||||||||||||| ||||||| |||||||||||| ||| |||||| ||||||||||||| | || |||| |||||||||||||||| | |
|
|
| T |
10420350 |
ttaccaggaggaacatatcctatacttcccttgattgtggaagaattaacttgatctttacttgaatggtctctggttccaagaatgagcctagctaagc |
10420449 |
T |
|
| Q |
119 |
caaagtctcccaagtgggctacaatgtcatcatcaagaagaacattgcttggcttaacatcacagtgaactacagcttgttctatatcattgtgaagata |
218 |
Q |
| |
|
|||||||||||||||| |||||||||||||| || |||||||| ||||| ||||||| |||||||||||||| ||||| ||| || ||||||||||||| |
|
|
| T |
10420450 |
caaagtctcccaagtgagctacaatgtcatcgtccagaagaacgttgctcggcttaatatcacagtgaactatggcttgctctgtaccattgtgaagata |
10420549 |
T |
|
| Q |
219 |
atccaatgcatgagctacatcaagagcaatgtctatcctttgtgtgaggttgagattatggcttccagatccttcattatcgtgcaacatcttttctaga |
318 |
Q |
| |
|
|| | ||||||||||||||||||||||||||| | ||||||| ||||| |||||||||| ||||||| ||||| |||||||||| | |||||||||| |
|
|
| T |
10420550 |
attaagtgcatgagctacatcaagagcaatgtcaaccctttgtctgaggctgagattatgaattccagacccttctttatcgtgcagaagcttttctaga |
10420649 |
T |
|
| Q |
319 |
ctcatattaggcatgaactcaaaaacaatagccttgaaatcttcacctttataatcaacacttgaacaacaagttaggatcttgacaagattccggtgtt |
418 |
Q |
| |
|
||| |||||||||||||||||||||||||||||||| |||||||| ||||||||||| ||||||||||||||||||||||||||||| || ||||||| |
|
|
| T |
10420650 |
ctccccttaggcatgaactcaaaaacaatagccttgaactcttcacccttataatcaacgcttgaacaacaagttaggatcttgacaaggtttcggtgtt |
10420749 |
T |
|
| Q |
419 |
tcatctttcctagagatttacattctgcaatgaaactctctgctcctcc |
467 |
Q |
| |
|
||||||||||||||| || | |||||| ||||||||| ||||||||| |
|
|
| T |
10420750 |
tcatctttcctagagcttcgcgttctgctttgaaactctttgctcctcc |
10420798 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 233; E-Value: 1e-128
Query Start/End: Original strand, 19 - 467
Target Start/End: Original strand, 10415463 - 10415911
Alignment:
| Q |
19 |
ttaccaggaggaacatatcctatagttcccttaattgtggaagaagtaatttgatcattacttgaatggtttgaggatccatgaatgagcctagctaatc |
118 |
Q |
| |
|
||||||| ||||| ||||||||||||||| ||||| || || ||| | | |||||| ||||||||||| | || || |||| |||||||||||||||| | |
|
|
| T |
10415463 |
ttaccagtaggaatatatcctatagttcctttaatagtagaggaaatgacttgatctttacttgaatgctctgtggctccaagaatgagcctagctaagc |
10415562 |
T |
|
| Q |
119 |
caaagtctcccaagtgggctacaatgtcatcatcaagaagaacattgcttggcttaacatcacagtgaactacagcttgttctatatcattgtgaagata |
218 |
Q |
| |
|
|||||||||||||||||||||||| |||||| ||||||||||| ||||||| ||||||||||||||||||||| ||||| ||| |||||||||||||||| |
|
|
| T |
10415563 |
caaagtctcccaagtgggctacaacgtcatcgtcaagaagaacgttgcttgacttaacatcacagtgaactacggcttgctctgtatcattgtgaagata |
10415662 |
T |
|
| Q |
219 |
atccaatgcatgagctacatcaagagcaatgtctatcctttgtgtgaggttgagattatggcttccagatccttcattatcgtgcaacatcttttctaga |
318 |
Q |
| |
|
||| | ||||||||||| ||||||||| ||||||| |||||||| ||| |||||||||| ||||||| ||||| |||||||||| |||||||| ||| |
|
|
| T |
10415663 |
atcaagtgcatgagctagatcaagagcgatgtctaacctttgtgccaggctgagattatgaattccagacccttcgttatcgtgcagaatcttttccaga |
10415762 |
T |
|
| Q |
319 |
ctcatattaggcatgaactcaaaaacaatagccttgaaatcttcacctttataatcaacacttgaacaacaagttaggatcttgacaagattccggtgtt |
418 |
Q |
| |
|
||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||| ||||| | |
|
|
| T |
10415763 |
ctccccttaggcatgaactcaaaaacaatagccttgaaatcttcaccattataatcaacacttgaacaacaagttaggattttgacaagattacggtgct |
10415862 |
T |
|
| Q |
419 |
tcatctttcctagagatttacattctgcaatgaaactctctgctcctcc |
467 |
Q |
| |
|
|||||||||||| || || ||||| | |||||||||| |||| |||| |
|
|
| T |
10415863 |
tcatctttcctaaagcattgcattcctccatgaaactctttgctgctcc |
10415911 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 172; E-Value: 3e-92
Query Start/End: Original strand, 19 - 443
Target Start/End: Original strand, 10409766 - 10410196
Alignment:
| Q |
19 |
ttaccaggaggaacatatcctatagttcccttaattgtggaagaagtaatttgatcattacttgaatggtttgaggatccatgaatgagcctagctaatc |
118 |
Q |
| |
|
||||| |||||||||||||||||||||||||||||||| || ||| ||| |||||| ||||||||||| | || | |||| |||| ||||||||||| | |
|
|
| T |
10409766 |
ttaccgggaggaacatatcctatagttcccttaattgtagaggaaataacttgatctttacttgaatgttctgtagctccacgaattagcctagctaagc |
10409865 |
T |
|
| Q |
119 |
caaagtctcccaagtgggctacaatgtcatcatcaagaagaacattgcttggcttaacatcacagtgaactacagcttgttctatatcattgtgaagata |
218 |
Q |
| |
|
|||||||||| ||||| |||||| |||||||||| ||||||||||||||||| ||||| ||| ||||| || |||| ||| |||| |||||||||| |
|
|
| T |
10409866 |
caaagtctcctaagtgagctacattgtcatcatcgagaagaacattgcttggtttaacgccactatgaaccaccacttgctctgcatcaatgtgaagata |
10409965 |
T |
|
| Q |
219 |
atccaatgcatgagctacatcaagagcaatgtctatcctttgtgtgaggttgagattatggcttccaga------tccttcattatcgtgcaacatcttt |
312 |
Q |
| |
|
|||||||||||||||||| | ||| ||||||||| ||||||||||| |||||||| | ||| ||| | ||| |||| | ||||| | ||| |
|
|
| T |
10409966 |
atccaatgcatgagctacgttgagaacaatgtctaacctttgtgtgaaattgagattcagatttctagactcgtgttctttattaccatgcaaaaggttt |
10410065 |
T |
|
| Q |
313 |
tctagactcatattaggcatgaactcaaaaacaatagccttgaaatcttcacctttataatcaacacttgaacaacaagttaggatcttgacaagattcc |
412 |
Q |
| |
|
|| | |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |
|
|
| T |
10410066 |
tccaaactcccattaggcatgaactcaaaaacaatagccttgaaatcttcacctttataatcaacacttgaacaacaagttaggatcttaacaagattcc |
10410165 |
T |
|
| Q |
413 |
ggtgtttcatctttcctagagatttacattc |
443 |
Q |
| |
|
|||| ||||| ||||| |||| ||| ||||| |
|
|
| T |
10410166 |
ggtgcttcatgtttcccagagctttgcattc |
10410196 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 209; Significance: 1e-114; HSPs: 3)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 209; E-Value: 1e-114
Query Start/End: Original strand, 17 - 457
Target Start/End: Complemental strand, 30663438 - 30662998
Alignment:
| Q |
17 |
acttaccaggaggaacatatcctatagttcccttaattgtggaagaagtaatttgatcattacttgaatggtttgaggatccatgaatgagcctagctaa |
116 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||| ||| ||| |||||| |||||||| || || ||||||||| | ||| || || |
|
|
| T |
30663438 |
acttaccaggaggaacatatcctatagttcccttaattgtggacgaattaacttgatctacacttgaatatgctgtggctccatgaattaaccttgccaa |
30663339 |
T |
|
| Q |
117 |
tccaaagtctcccaagtgggctacaatgtcatcatcaagaagaacattgcttggcttaacatcacagtgaactacagcttgttctatatcattgtgaaga |
216 |
Q |
| |
|
|||||||||||||||||||||||| |||||||||||||||||||||||| |||| || |||||||||||||||||| | | || || ||||||||||| |
|
|
| T |
30663338 |
tccaaagtctcccaagtgggctaccatgtcatcatcaagaagaacattgtttggtttcacatcacagtgaactacaacattctcagtaccattgtgaaga |
30663239 |
T |
|
| Q |
217 |
taatccaatgcatgagctacatcaagagcaatgtctatcctttgtgtgaggttgagattatggcttccagatccttcattatcgtgcaacatcttttcta |
316 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| | ||||||||||||| |||||||||| ||||||| |||| |||||||||| | |||||||| |
|
|
| T |
30663238 |
taatccaatgcatgagctacatcaagagcaatgtcaaccctttgtgtgaggctgagattatgaattccagactcttcgttatcgtgcagaagcttttcta |
30663139 |
T |
|
| Q |
317 |
gactcatattaggcatgaactcaaaaacaatagccttgaaatcttcacctttataatcaacacttgaacaacaagttaggatcttgacaagattccggtg |
416 |
Q |
| |
|
||||| |||||||||||||||||||||||||||||||| || ||||| |||||||| || ||||||||||| || || |||||||||||||| ||||| |
|
|
| T |
30663138 |
gactccccttaggcatgaactcaaaaacaatagccttgaactcgtcacccttataatctacgcttgaacaacatgtaagaatcttgacaagatttcggtg |
30663039 |
T |
|
| Q |
417 |
tttcatctttcctagagatttacattctgcaatgaaactct |
457 |
Q |
| |
|
||||||||||| | || ||| ||||| || ||||||||| |
|
|
| T |
30663038 |
cttcatctttcccaaagctttgcattcagctgtgaaactct |
30662998 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 209; E-Value: 1e-114
Query Start/End: Original strand, 17 - 457
Target Start/End: Complemental strand, 30672118 - 30671678
Alignment:
| Q |
17 |
acttaccaggaggaacatatcctatagttcccttaattgtggaagaagtaatttgatcattacttgaatggtttgaggatccatgaatgagcctagctaa |
116 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||| ||| ||| |||||| |||||||| || || ||||||||| | ||| || || |
|
|
| T |
30672118 |
acttaccaggaggaacatatcctatagttcccttaattgtggacgaattaacttgatctacacttgaatatgctgtggctccatgaattaaccttgccaa |
30672019 |
T |
|
| Q |
117 |
tccaaagtctcccaagtgggctacaatgtcatcatcaagaagaacattgcttggcttaacatcacagtgaactacagcttgttctatatcattgtgaaga |
216 |
Q |
| |
|
|||||||||||||||||||||||| |||||||||||||||||||||||| |||| || |||||||||||||||||| | | || || ||||||||||| |
|
|
| T |
30672018 |
tccaaagtctcccaagtgggctaccatgtcatcatcaagaagaacattgtttggtttcacatcacagtgaactacaacattctcagtaccattgtgaaga |
30671919 |
T |
|
| Q |
217 |
taatccaatgcatgagctacatcaagagcaatgtctatcctttgtgtgaggttgagattatggcttccagatccttcattatcgtgcaacatcttttcta |
316 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| | ||||||||||||| |||||||||| ||||||| |||| |||||||||| | |||||||| |
|
|
| T |
30671918 |
taatccaatgcatgagctacatcaagagcaatgtcaaccctttgtgtgaggctgagattatgaattccagactcttcgttatcgtgcagaagcttttcta |
30671819 |
T |
|
| Q |
317 |
gactcatattaggcatgaactcaaaaacaatagccttgaaatcttcacctttataatcaacacttgaacaacaagttaggatcttgacaagattccggtg |
416 |
Q |
| |
|
||||| |||||||||||||||||||||||||||||||| || ||||| |||||||| || ||||||||||| || || |||||||||||||| ||||| |
|
|
| T |
30671818 |
gactccccttaggcatgaactcaaaaacaatagccttgaactcgtcacccttataatctacgcttgaacaacatgtaagaatcttgacaagatttcggtg |
30671719 |
T |
|
| Q |
417 |
tttcatctttcctagagatttacattctgcaatgaaactct |
457 |
Q |
| |
|
||||||||||| | || ||| ||||| || ||||||||| |
|
|
| T |
30671718 |
cttcatctttcccaaagctttgcattcagctgtgaaactct |
30671678 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 201; E-Value: 1e-109
Query Start/End: Original strand, 17 - 457
Target Start/End: Complemental strand, 30626487 - 30626047
Alignment:
| Q |
17 |
acttaccaggaggaacatatcctatagttcccttaattgtggaagaagtaatttgatcattacttgaatggtttgaggatccatgaatgagcctagctaa |
116 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||| ||| ||| |||||| |||||||| || || ||||||||| | ||| || || |
|
|
| T |
30626487 |
acttaccaggaggaacatatcctatagttcccttaattgtggacgaattaacttgatctacacttgaatatgctgtggctccatgaattaaccttgccaa |
30626388 |
T |
|
| Q |
117 |
tccaaagtctcccaagtgggctacaatgtcatcatcaagaagaacattgcttggcttaacatcacagtgaactacagcttgttctatatcattgtgaaga |
216 |
Q |
| |
|
|||||||||||||||||||||||| |||||||||||||||||||||||| |||| || |||||||| ||||||||| | | || || ||||||||||| |
|
|
| T |
30626387 |
tccaaagtctcccaagtgggctaccatgtcatcatcaagaagaacattgtttggtttcacatcacattgaactacaacattctcagtaccattgtgaaga |
30626288 |
T |
|
| Q |
217 |
taatccaatgcatgagctacatcaagagcaatgtctatcctttgtgtgaggttgagattatggcttccagatccttcattatcgtgcaacatcttttcta |
316 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| | ||||||||||||| |||||||||| ||||||| |||| |||||||||| | |||||||| |
|
|
| T |
30626287 |
taatccaatgcatgagctacatcaagagcaatgtcaaccctttgtgtgaggctgagattatgaattccagactcttcgttatcgtgcagaagcttttcta |
30626188 |
T |
|
| Q |
317 |
gactcatattaggcatgaactcaaaaacaatagccttgaaatcttcacctttataatcaacacttgaacaacaagttaggatcttgacaagattccggtg |
416 |
Q |
| |
|
||||| |||||||||||||||||||||||||||||||| || ||||| |||||||| | ||||||||||| || || |||||||||||||| ||||| |
|
|
| T |
30626187 |
gactccccttaggcatgaactcaaaaacaatagccttgaactcgtcacccttataatctattcttgaacaacatgtaagaatcttgacaagatttcggtg |
30626088 |
T |
|
| Q |
417 |
tttcatctttcctagagatttacattctgcaatgaaactct |
457 |
Q |
| |
|
||||||||||| | || ||| ||||| || ||||||||| |
|
|
| T |
30626087 |
cttcatctttcccaaagctttgcattcagctgtgaaactct |
30626047 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 146; Significance: 1e-76; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 146; E-Value: 1e-76
Query Start/End: Original strand, 123 - 392
Target Start/End: Complemental strand, 1154056 - 1153787
Alignment:
| Q |
123 |
gtctcccaagtgggctacaatgtcatcatcaagaagaacattgcttggcttaacatcacagtgaactacagcttgttctatatcattgtgaagataatcc |
222 |
Q |
| |
|
||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||| | |||| | | |||||||||||||| |||| |
|
|
| T |
1154056 |
gtctcccaagtgggctacattgtcatcatcaagaagaacattgcttggcttaatatcacagtgaactgtaacttgctttgtatcattgtgaagaaaatca |
1153957 |
T |
|
| Q |
223 |
aatgcatgagctacatcaagagcaatgtctatcctttgtgtgaggttgagattatggcttccagatccttcattatcgtgcaacatcttttctagactca |
322 |
Q |
| |
|
| ||||||||||| ||||||||||| |||| ||||| |||||| |||||||| || || |||| |||||| |||| ||||||||||||||||||||| |
|
|
| T |
1153956 |
agtgcatgagctatatcaagagcaaaatctaccctttttgtgagcttgagattgtgattttcagacccttcaatatcatgcaacatcttttctagactcc |
1153857 |
T |
|
| Q |
323 |
tattaggcatgaactcaaaaacaatagccttgaaatcttcacctttataatcaacacttgaacaacaagt |
392 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||| |||||| |||||| |||||||| |
|
|
| T |
1153856 |
cgttaggcatgaactcaaaaacaatagccttgaaatcttcacctttgcaatcaatacttgagcaacaagt |
1153787 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 75; Significance: 2e-34; HSPs: 3)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 156 - 443
Target Start/End: Complemental strand, 13564895 - 13564620
Alignment:
| Q |
156 |
aagaacattgcttggcttaacatcacagtgaactacagcttgttctatatcattgtgaagataatccaatgcatgagctacatcaagagcaatgtctatc |
255 |
Q |
| |
|
|||||| ||||| |||||||||||||| ||| ||| ||||| |||| |||||||||||||||||||||||||| ||||| |||| | | |
|
|
| T |
13564895 |
aagaacgttgctcggcttaacatcacaatgacctaaggcttgctctacatcattgtgaagataatccaatgcataagcta------------tgtccacc |
13564808 |
T |
|
| Q |
256 |
ctttgtgtgaggttgagattatggcttccagatccttcattatcgtgcaacatcttttctagactcatattaggcatgaactcaaaaacaatagccttga |
355 |
Q |
| |
|
||||| | | | |||||| ||| || ||| |||||| |||| ||||||||||||||||||||| ||||| |||||||||||||||||||||||||| |
|
|
| T |
13564807 |
ctttgagaaaagctgagataatgattttcagttccttcgttattgtgcaacatcttttctagactaccattagacatgaactcaaaaacaatagccttga |
13564708 |
T |
|
| Q |
356 |
aatcttcacctttataatcaacacttgaacaacaagttaggatcttgacaagattccggtgtttcatctttcctagagatttacattc |
443 |
Q |
| |
|
|||| ||||| |||| ||||| ||||||||| ||| || ||||| ||| |||| ||||| ||||||||||||| || ||| ||||| |
|
|
| T |
13564707 |
aatcgtcacccttattatcaatacttgaacattaaggaagaatcttaacacgatttcggtgcttcatctttcctaaagctttgcattc |
13564620 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 19 - 136
Target Start/End: Complemental strand, 15294163 - 15294046
Alignment:
| Q |
19 |
ttaccaggaggaacatatcctatagttcccttaattgtggaagaagtaatttgatcattacttgaatggtttgaggatccatgaatgagcctagctaatc |
118 |
Q |
| |
|
||||||||||||| ||||||||||||||| ||||| | || | | ||| || ||| ||||||||||| | | || |||||||||||||||||| || | |
|
|
| T |
15294163 |
ttaccaggaggaatatatcctatagttcctttaatcttagaggcaataactttatctttacttgaatgctctatggttccatgaatgagcctagccaagc |
15294064 |
T |
|
| Q |
119 |
caaagtctcccaagtggg |
136 |
Q |
| |
|
|||||||||||||||||| |
|
|
| T |
15294063 |
caaagtctcccaagtggg |
15294046 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 19 - 136
Target Start/End: Complemental strand, 15474532 - 15474415
Alignment:
| Q |
19 |
ttaccaggaggaacatatcctatagttcccttaattgtggaagaagtaatttgatcattacttgaatggtttgaggatccatgaatgagcctagctaatc |
118 |
Q |
| |
|
||||||||||||| ||||||||||||||| ||||| | || | | ||| || ||| ||||||||||| | | || |||||||||||||||||| || | |
|
|
| T |
15474532 |
ttaccaggaggaatatatcctatagttcctttaatcttagaggcaataactttatctttacttgaatgctctatggttccatgaatgagcctagccaagc |
15474433 |
T |
|
| Q |
119 |
caaagtctcccaagtggg |
136 |
Q |
| |
|
|||||||||||||||||| |
|
|
| T |
15474432 |
caaagtctcccaagtggg |
15474415 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0692 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0692
Description:
Target: scaffold0692; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 142 - 187
Target Start/End: Complemental strand, 7540 - 7495
Alignment:
| Q |
142 |
atgtcatcatcaagaagaacattgcttggcttaacatcacagtgaa |
187 |
Q |
| |
|
||||||||||||||||| |||||||||||||| | |||||| |||| |
|
|
| T |
7540 |
atgtcatcatcaagaaggacattgcttggctttagatcacaatgaa |
7495 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 30; Significance: 0.0000002; HSPs: 2)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 142 - 187
Target Start/End: Complemental strand, 12899817 - 12899772
Alignment:
| Q |
142 |
atgtcatcatcaagaagaacattgcttggcttaacatcacagtgaa |
187 |
Q |
| |
|
||||||||||||||||| |||||||||||||| | |||||| |||| |
|
|
| T |
12899817 |
atgtcatcatcaagaaggacattgcttggctttatatcacaatgaa |
12899772 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 142 - 187
Target Start/End: Complemental strand, 12958325 - 12958280
Alignment:
| Q |
142 |
atgtcatcatcaagaagaacattgcttggcttaacatcacagtgaa |
187 |
Q |
| |
|
|||||| |||||||||| |||||||||||||| | ||||||||||| |
|
|
| T |
12958325 |
atgtcaccatcaagaaggacattgcttggctttagatcacagtgaa |
12958280 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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