View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF3302_low_5 (Length: 374)

Name: NF3302_low_5
Description: NF3302
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF3302_low_5
NF3302_low_5
[»] chr5 (6 HSPs)
chr5 (17-359)||(4909515-4909857)
chr5 (119-194)||(4907694-4907769)
chr5 (171-221)||(14947482-14947532)
chr5 (119-160)||(13655606-13655647)
chr5 (258-348)||(18851078-18851172)
chr5 (172-220)||(14946713-14946761)
[»] chr8 (13 HSPs)
chr8 (17-221)||(26492032-26492236)
chr8 (77-160)||(39255656-39255739)
chr8 (222-356)||(32927851-32927989)
chr8 (89-160)||(44751669-44751740)
chr8 (171-221)||(41709588-41709638)
chr8 (95-160)||(61515-61580)
chr8 (95-160)||(1365890-1365955)
chr8 (76-140)||(4627015-4627080)
chr8 (280-356)||(35495011-35495087)
chr8 (169-221)||(41708416-41708468)
chr8 (77-131)||(12351811-12351865)
chr8 (280-353)||(15677806-15677880)
chr8 (291-355)||(38335850-38335914)
[»] chr3 (6 HSPs)
chr3 (17-221)||(4486468-4486671)
chr3 (172-220)||(49085300-49085348)
chr3 (77-149)||(17227040-17227112)
chr3 (285-356)||(41596137-41596208)
chr3 (173-221)||(35441777-35441825)
chr3 (280-348)||(32523336-32523404)
[»] chr4 (12 HSPs)
chr4 (56-160)||(55159949-55160054)
chr4 (224-356)||(32818358-32818494)
chr4 (176-221)||(30137132-30137177)
chr4 (176-221)||(30138250-30138295)
chr4 (95-160)||(47198666-47198731)
chr4 (224-356)||(35065024-35065160)
chr4 (95-160)||(28683568-28683633)
chr4 (53-160)||(43737654-43737762)
chr4 (173-221)||(47925548-47925596)
chr4 (301-351)||(29114755-29114805)
chr4 (300-356)||(21691200-21691256)
chr4 (301-353)||(39386675-39386727)
[»] chr1 (13 HSPs)
chr1 (56-160)||(35615827-35615932)
chr1 (56-160)||(37874125-37874230)
chr1 (77-160)||(48869830-48869913)
chr1 (95-160)||(17496084-17496149)
chr1 (170-221)||(10459768-10459819)
chr1 (224-356)||(28083876-28084012)
chr1 (280-345)||(7524134-7524199)
chr1 (155-221)||(38634943-38635009)
chr1 (172-221)||(48980706-48980755)
chr1 (176-221)||(50137020-50137065)
chr1 (173-221)||(8673662-8673710)
chr1 (162-218)||(8674679-8674735)
chr1 (169-221)||(27969896-27969948)
[»] chr6 (6 HSPs)
chr6 (56-160)||(9573696-9573801)
chr6 (173-221)||(11768604-11768653)
chr6 (280-351)||(34910968-34911037)
chr6 (291-349)||(3482078-3482136)
chr6 (284-356)||(434225-434297)
chr6 (280-356)||(16540128-16540204)
[»] chr2 (2 HSPs)
chr2 (77-160)||(5276526-5276609)
chr2 (176-221)||(33473866-33473911)
[»] chr7 (6 HSPs)
chr7 (285-356)||(40491604-40491675)
chr7 (176-221)||(11694798-11694843)
chr7 (170-221)||(21460131-21460182)
chr7 (155-221)||(19794398-19794464)
chr7 (173-221)||(45720726-45720774)
chr7 (119-192)||(19737904-19737977)
[»] scaffold1037 (1 HSPs)
scaffold1037 (53-148)||(2102-2198)
[»] scaffold1031 (1 HSPs)
scaffold1031 (53-148)||(2220-2316)


Alignment Details
Target: chr5 (Bit Score: 315; Significance: 1e-177; HSPs: 6)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 315; E-Value: 1e-177
Query Start/End: Original strand, 17 - 359
Target Start/End: Original strand, 4909515 - 4909857
Alignment:
Q  17 atgaaaaatacaccatggaatggaaaagagaatatgaagatagtggttgagagattcatggagagagaatggttgggaaagatggtgagataaaaatcta 116  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4909515 atgaaaaatacaccatgaaatggaaaagagaatatgaagatagtggttgggagattcatggagagagaatggttgggaaagatggtgagataaaaatcta 4909614  T
Q  117 gcgttgagagactattgtaatagtgtgctctttatgtgatccaagggtcaagaaaaaacttgtgcatggtgcacaagtttaacacttgtgcaccctaaat 216  Q
    | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4909615 gtgttgagagactattgtaatagtgtgctctttatgtgatccaagggtcaagaaaaaacttgtgcatggtgcacaagtttaacacttgtgcaccctaaat 4909714  T
Q  217 gccactgtttggttgctttcgagtagagtttattttacctttataaatgattttacttgaagcatttatagctcttgattattgaattgatttttactca 316  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||    
T  4909715 gccaccgtttggttgctttcgagtagagtttattttacctttataaatgattttacttgaagcatttgtagctcttgattattgaattgatttttacgca 4909814  T
Q  317 caagtttaaagtttaactaacttttacatgaatatatccacat 359  Q
    |||||||||||||||||||||||||||| ||||||||||||||    
T  4909815 caagtttaaagtttaactaacttttacacgaatatatccacat 4909857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 119 - 194
Target Start/End: Complemental strand, 4907769 - 4907694
Alignment:
Q  119 gttgagagactattgtaatagtgtgctctttatgtgatccaagggtcaagaaaaaacttgtgcatggtgcacaagt 194  Q
    |||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4907769 gttgagtgactattataatagtgtgctctttatgtgatccaagggtcaagaaaaaacttgtgcatggtgcacaagt 4907694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 171 - 221
Target Start/End: Original strand, 14947482 - 14947532
Alignment:
Q  171 aaaacttgtgcatggtgcacaagtttaacacttgtgcaccctaaatgccac 221  Q
    |||||||||||||||||||||| ||| | |||||||||  |||||||||||    
T  14947482 aaaacttgtgcatggtgcacaaattttatacttgtgcatgctaaatgccac 14947532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 119 - 160
Target Start/End: Original strand, 13655606 - 13655647
Alignment:
Q  119 gttgagagactattgtaatagtgtgctctttatgtgatccaa 160  Q
    ||||||||||||||||||||||||| ||||| | ||||||||    
T  13655606 gttgagagactattgtaatagtgtgttctttgtatgatccaa 13655647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 258 - 348
Target Start/End: Complemental strand, 18851172 - 18851078
Alignment:
Q  258 tataaatgattttacttgaagc----atttatagctcttgattattgaattgatttttactcacaagtttaaagtttaactaacttttacatgaa 348  Q
    ||||| ||||| ||||||||||    |||| ||||| |||||||| ||||||||||| || ||||  |||| |||| |||| |||||||||||||    
T  18851172 tataattgattctacttgaagctatgatttgtagcttttgattatagaattgattttcacacacatatttatagttaaactcacttttacatgaa 18851078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 172 - 220
Target Start/End: Complemental strand, 14946761 - 14946713
Alignment:
Q  172 aaacttgtgcatggtgcacaagtttaacacttgtgcaccctaaatgcca 220  Q
    |||||| | |||||||||||||||| ||  |||||||||||||||||||    
T  14946761 aaacttttccatggtgcacaagttttacgtttgtgcaccctaaatgcca 14946713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 177; Significance: 2e-95; HSPs: 13)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 177; E-Value: 2e-95
Query Start/End: Original strand, 17 - 221
Target Start/End: Complemental strand, 26492236 - 26492032
Alignment:
Q  17 atgaaaaatacaccatggaatggaaaagagaatatgaagatagtggttgagagattcatggagagagaatggttgggaaagatggtgagataaaaatcta 116  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||  |||||||||||||||||||||||||||| |||||||| |||||||||||    
T  26492236 atgaaaaatacaccatggaatggaaaagagaagatgaagatagtggttggaagattcatggagagagaatggttgggaatgatggtgacataaaaatcta 26492137  T
Q  117 gcgttgagagactattgtaatagtgtgctctttatgtgatccaagggtcaagaaaaaacttgtgcatggtgcacaagtttaacacttgtgcaccctaaat 216  Q
    | |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26492136 gtgttgagagactattgtaatagtgtactctttatgtgatccaagggtcaagaaaaaacttgtgcatggtgcacaagtttaacacttgtgcaccctaaat 26492037  T
Q  217 gccac 221  Q
    |||||    
T  26492036 gccac 26492032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 77 - 160
Target Start/End: Original strand, 39255656 - 39255739
Alignment:
Q  77 gagagagaatggttgggaaagatggtgagataaaaatctagcgttgagagactattgtaatagtgtgctctttatgtgatccaa 160  Q
    |||||| | |||||||| ||||| || |||||||||||||| ||||||||||||||||||||||||| ||||| | ||||||||    
T  39255656 gagagaaagtggttggggaagatagtaagataaaaatctagtgttgagagactattgtaatagtgtgttctttgtatgatccaa 39255739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 222 - 356
Target Start/End: Original strand, 32927851 - 32927989
Alignment:
Q  222 tgtttggttgctttcgagtagagtttattttacctttataaatgattttacttgaagc----atttatagctcttgattattgaattgatttttactcac 317  Q
    ||||||||||||||| |||||| || ||||| |||  |||  ||||| ||||||||||    |||| ||||| |||||||| ||||| |||||||| |||    
T  32927851 tgtttggttgctttccagtagaattgattttgcctcaatagttgattctacttgaagctaggatttgtagcttttgattatagaattcatttttacacac 32927950  T
Q  318 aagtttaaagtttaactaacttttacatgaatatatcca 356  Q
    || |||| |||| |||| |||||||||||||| ||||||    
T  32927951 aaatttatagttcaactcacttttacatgaatgtatcca 32927989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 89 - 160
Target Start/End: Complemental strand, 44751740 - 44751669
Alignment:
Q  89 ttgggaaagatggtgagataaaaatctagcgttgagagactattgtaatagtgtgctctttatgtgatccaa 160  Q
    ||||| ||||| || |||||||||||||| ||||||||||||||||||||||||| ||||| | ||||||||    
T  44751740 ttggggaagatagtaagataaaaatctagtgttgagagactattgtaatagtgtgttctttgtatgatccaa 44751669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 171 - 221
Target Start/End: Original strand, 41709588 - 41709638
Alignment:
Q  171 aaaacttgtgcatggtgcacaagtttaacacttgtgcaccctaaatgccac 221  Q
    |||||||||| ||||||||||| ||||||| ||||||||||||||||||||    
T  41709588 aaaacttgtgtatggtgcacaaatttaacatttgtgcaccctaaatgccac 41709638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 95 - 160
Target Start/End: Complemental strand, 61580 - 61515
Alignment:
Q  95 aagatggtgagataaaaatctagcgttgagagactattgtaatagtgtgctctttatgtgatccaa 160  Q
    ||||| || |||||| ||||||| ||||||||||||||||||||||||| ||||| | ||||||||    
T  61580 aagatagtaagataagaatctagtgttgagagactattgtaatagtgtgttctttgtatgatccaa 61515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 95 - 160
Target Start/End: Complemental strand, 1365955 - 1365890
Alignment:
Q  95 aagatggtgagataaaaatctagcgttgagagactattgtaatagtgtgctctttatgtgatccaa 160  Q
    ||||| || |||||| ||||||| |||||||||||||||||| |||||| ||||| | ||||||||    
T  1365955 aagatagtaagataagaatctagtgttgagagactattgtaacagtgtgttctttgtatgatccaa 1365890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 76 - 140
Target Start/End: Complemental strand, 4627080 - 4627015
Alignment:
Q  76 ggagagagaatggttgggaaagatggtgagataaaaatctagcgttg-agagactattgtaatagt 140  Q
    |||||||||||||||||| ||||| |||||||| |||||||| ||||  | |||||||||||||||    
T  4627080 ggagagagaatggttggggaagatagtgagatacaaatctagtgttgtggggactattgtaatagt 4627015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 280 - 356
Target Start/End: Original strand, 35495011 - 35495087
Alignment:
Q  280 atttatagctcttgattattgaattgatttttactcacaagtttaaagtttaactaacttttacatgaatatatcca 356  Q
    |||| ||||| |||||| | |||||| ||||||| ||||| | || |||| |||| |||||||||||||||||||||    
T  35495011 atttgtagcttttgattctagaattgttttttacacacaaatctatagttcaacttacttttacatgaatatatcca 35495087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 169 - 221
Target Start/End: Complemental strand, 41708468 - 41708416
Alignment:
Q  169 aaaaaacttgtgcatggtgcacaagtttaacacttgtgcaccctaaatgccac 221  Q
    |||||||||||||||||||||||| ||||| | |||||||  |||||||||||    
T  41708468 aaaaaacttgtgcatggtgcacaaatttaatatttgtgcattctaaatgccac 41708416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 77 - 131
Target Start/End: Original strand, 12351811 - 12351865
Alignment:
Q  77 gagagagaatggttgggaaagatggtgagataaaaatctagcgttgagagactat 131  Q
    |||||| | |||||||| ||||| || |||||||||||||| |||||||||||||    
T  12351811 gagagaaagtggttggggaagatagtaagataaaaatctagtgttgagagactat 12351865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 280 - 353
Target Start/End: Complemental strand, 15677880 - 15677806
Alignment:
Q  280 atttatagctcttgattattgaattgat-ttttactcacaagtttaaagtttaactaacttttacatgaatatat 353  Q
    |||||||||| |||||||| |||||||| |||||| ||||| |||| |||| |||| | | ||||||||||||||    
T  15677880 atttatagcttttgattatagaattgattttttacacacaaatttatagttcaactcattgttacatgaatatat 15677806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 291 - 355
Target Start/End: Complemental strand, 38335914 - 38335850
Alignment:
Q  291 ttgattattgaattgatttttactcacaagtttaaagtttaactaacttttacatgaatatatcc 355  Q
    |||||| | |||||||||||||| ||||| |||| | | ||||| |||||||||||||| |||||    
T  38335914 ttgattttagaattgatttttacgcacaaatttatattctaactcacttttacatgaatgtatcc 38335850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 153; Significance: 5e-81; HSPs: 6)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 153; E-Value: 5e-81
Query Start/End: Original strand, 17 - 221
Target Start/End: Original strand, 4486468 - 4486671
Alignment:
Q  17 atgaaaaatacaccatggaatggaaaagagaatatgaagatagtggttgagagattcatggagagagaatggttgggaaagatggtgagataaaaatcta 116  Q
    |||||| ||||||||||||||||||||||||| | ||||||| |||||| |||||||||||||||||||||||||||||||||| |||||||||||| ||    
T  4486468 atgaaacatacaccatggaatggaaaagagaagacgaagataatggttgggagattcatggagagagaatggttgggaaagatgctgagataaaaattta 4486567  T
Q  117 gcgttgagagactattgtaatagtgtgctctttatgtgatccaagggtcaagaaaaaacttgtgcatggtgcacaagtttaacacttgtgcaccctaaat 216  Q
    | ||| ||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||    
T  4486568 gtgtttagagactattgtaatagtgtgctttttatgtgatccaagggtcaa-aaaaaacttgtgaatggtgcacaagtttaacacttgtgcaccctaaat 4486666  T
Q  217 gccac 221  Q
    |||||    
T  4486667 gccac 4486671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 172 - 220
Target Start/End: Complemental strand, 49085348 - 49085300
Alignment:
Q  172 aaacttgtgcatggtgcacaagtttaacacttgtgcaccctaaatgcca 220  Q
    ||||||||||||||||||||| ||||||||||||||| |||||||||||    
T  49085348 aaacttgtgcatggtgcacaaatttaacacttgtgcatcctaaatgcca 49085300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 77 - 149
Target Start/End: Complemental strand, 17227112 - 17227040
Alignment:
Q  77 gagagagaatggttgggaaagatggtgagataaaaatctagcgttgagagactattgtaatagtgtgctcttt 149  Q
    |||||| | |||||||| ||||| |  |||||||||||||| |||||| |||||||||||||||||| |||||    
T  17227112 gagagaaagtggttggggaagataggaagataaaaatctagtgttgagggactattgtaatagtgtgttcttt 17227040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 285 - 356
Target Start/End: Complemental strand, 41596208 - 41596137
Alignment:
Q  285 tagctcttgattattgaattgatttttactcacaagtttaaagtttaactaacttttacatgaatatatcca 356  Q
    ||||| |||||||  |||||||||||||| |||||||||| ||||| ||| |||||| ||||||| ||||||    
T  41596208 tagcttttgattaaagaattgatttttacacacaagtttatagtttgactcacttttccatgaatgtatcca 41596137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 173 - 221
Target Start/End: Complemental strand, 35441825 - 35441777
Alignment:
Q  173 aacttgtgcatggtgcacaagtttaacacttgtgcaccctaaatgccac 221  Q
    |||||||||||||||||||| |||| || || |||||||||||||||||    
T  35441825 aacttgtgcatggtgcacaaatttatcatttatgcaccctaaatgccac 35441777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 280 - 348
Target Start/End: Complemental strand, 32523404 - 32523336
Alignment:
Q  280 atttatagctcttgattattgaattgatttttactcacaagtttaaagtttaactaacttttacatgaa 348  Q
    |||| ||||| |||||| |  ||||||||||||| ||||| |||| ||||||||| |||| ||||||||    
T  32523404 atttgtagcttttgattctaaaattgatttttacacacaaatttagagtttaactcacttatacatgaa 32523336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 54; Significance: 6e-22; HSPs: 12)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 56 - 160
Target Start/End: Original strand, 55159949 - 55160054
Alignment:
Q  56 atagtggttgagagattcatg-gagagagaatggttgggaaagatggtgagataaaaatctagcgttgagagactattgtaatagtgtgctctttatgtg 154  Q
    ||||||| |||||||  |||| |||||| | |||||||| ||||| || |||||||||||||| ||||||||||||||||||||||||| ||||||| ||    
T  55159949 atagtgggtgagagaggcatgtgagagaaagtggttggggaagatagtaagataaaaatctagtgttgagagactattgtaatagtgtgttctttatatg 55160048  T
Q  155 atccaa 160  Q
    ||||||    
T  55160049 atccaa 55160054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 224 - 356
Target Start/End: Complemental strand, 32818494 - 32818358
Alignment:
Q  224 tttggttgctttcgagtagagtttattttacctttataaatgattttacttgaagc----atttatagctcttgattattgaattgatttttactcacaa 319  Q
    ||||||| |||||||||||| || ||||| |||  | || ||||| || |||||||    |||| ||||| |||||| | |||||||||||| | |||||    
T  32818494 tttggtttctttcgagtagaattgattttgcctccagaattgattctatttgaagctagaatttgtagcttttgattctagaattgatttttgcacacaa 32818395  T
Q  320 gtttaaagtttaactaacttttacatgaatatatcca 356  Q
     |||| |||| ||||||||||||||||||| ||||||    
T  32818394 atttatagttcaactaacttttacatgaatgtatcca 32818358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 176 - 221
Target Start/End: Complemental strand, 30137177 - 30137132
Alignment:
Q  176 ttgtgcatggtgcacaagtttaacacttgtgcaccctaaatgccac 221  Q
    |||||||||||||||||||||||||||||||||  |||||||||||    
T  30137177 ttgtgcatggtgcacaagtttaacacttgtgcattctaaatgccac 30137132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 176 - 221
Target Start/End: Original strand, 30138250 - 30138295
Alignment:
Q  176 ttgtgcatggtgcacaagtttaacacttgtgcaccctaaatgccac 221  Q
    |||||||||||||||||||||||||||||||||  |||||||||||    
T  30138250 ttgtgcatggtgcacaagtttaacacttgtgcattctaaatgccac 30138295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 95 - 160
Target Start/End: Complemental strand, 47198731 - 47198666
Alignment:
Q  95 aagatggtgagataaaaatctagcgttgagagactattgtaatagtgtgctctttatgtgatccaa 160  Q
    ||||| || |||||| ||||||| ||||||||||||||||||||||||| ||||| | ||||||||    
T  47198731 aagatagtaagataagaatctagtgttgagagactattgtaatagtgtgttctttgtatgatccaa 47198666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 224 - 356
Target Start/End: Original strand, 35065024 - 35065160
Alignment:
Q  224 tttggttgctttcgagtagagtttattttacctttataaatgattttacttgaagc----atttatagctcttgattattgaattgatttttactcacaa 319  Q
    |||||||||||||||||||| || ||||| |||  |||| ||||||||||||||||    |||| |  || |||||| | |||||||||||||| |||||    
T  35065024 tttggttgctttcgagtagaattgattttgcctcaataattgattttacttgaagctagtatttgtgacttttgattctagaattgatttttacacacaa 35065123  T
Q  320 gtttaaagtttaactaacttttacatgaatatatcca 356  Q
     |||| |  |  ||| |||||||||||||| ||||||    
T  35065124 atttatatctccactcacttttacatgaatgtatcca 35065160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 95 - 160
Target Start/End: Complemental strand, 28683633 - 28683568
Alignment:
Q  95 aagatggtgagataaaaatctagcgttgagagactattgtaatagtgtgctctttatgtgatccaa 160  Q
    ||||| || |||||| ||||||| ||||||||||||||||||||||| | ||||| | ||||||||    
T  28683633 aagatagtaagataagaatctagtgttgagagactattgtaatagtgcgttctttgtatgatccaa 28683568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 53 - 160
Target Start/End: Complemental strand, 43737762 - 43737654
Alignment:
Q  53 aagatagtggttgagagattcatg-gagagagaatggttgggaaagatggtgagataaaaatctagcgttgagagactattgtaatagtgtgctctttat 151  Q
    ||||| |||| |||||||  |||| |||| ||| ||||||| |||||| || | ||||||||| || ||| |||| |||| ||||||||||| |||||||    
T  43737762 aagatggtgggtgagagagacatgtgagatagagtggttggaaaagatagtaatataaaaatccagtgttaagaggctatagtaatagtgtgttctttat 43737663  T
Q  152 gtgatccaa 160  Q
     ||||||||    
T  43737662 atgatccaa 43737654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 173 - 221
Target Start/End: Complemental strand, 47925596 - 47925548
Alignment:
Q  173 aacttgtgcatggtgcacaagtttaacacttgtgcaccctaaatgccac 221  Q
    |||||||| ||||||||||| ||||||| ||||||||| ||||||||||    
T  47925596 aacttgtgtatggtgcacaaatttaacatttgtgcaccttaaatgccac 47925548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 301 - 351
Target Start/End: Original strand, 29114755 - 29114805
Alignment:
Q  301 aattgatttttactcacaagtttaaagtttaactaacttttacatgaatat 351  Q
    |||||||||||||  |||| | |||||||||||| ||||||||||||||||    
T  29114755 aattgatttttacatacaaatataaagtttaactcacttttacatgaatat 29114805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 300 - 356
Target Start/End: Complemental strand, 21691256 - 21691200
Alignment:
Q  300 gaattgatttttactcacaagtttaaagtttaactaacttttacatgaatatatcca 356  Q
    ||||||||||| || ||||| |||| |||| |||  |||||||||||||||||||||    
T  21691256 gaattgattttcacacacaaatttatagttcaacacacttttacatgaatatatcca 21691200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 301 - 353
Target Start/End: Original strand, 39386675 - 39386727
Alignment:
Q  301 aattgatttttactcacaagtttaaagtttaactaacttttacatgaatatat 353  Q
    |||||||||| || ||||  ||||||||| |||| ||||||||||||||||||    
T  39386675 aattgattttcacacacatatttaaagttcaactcacttttacatgaatatat 39386727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 50; Significance: 2e-19; HSPs: 13)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 56 - 160
Target Start/End: Complemental strand, 35615932 - 35615827
Alignment:
Q  56 atagtggttgagagattcatg-gagagagaatggttgggaaagatggtgagataaaaatctagcgttgagagactattgtaatagtgtgctctttatgtg 154  Q
    ||||||| |||||||  |||| |||||| | |||||||| ||||| || |||||||||||||| ||||||||||||||||||||||||| ||||| | ||    
T  35615932 atagtgggtgagagaggcatgtgagagaaagtggttggggaagatagtaagataaaaatctagtgttgagagactattgtaatagtgtgttctttgtatg 35615833  T
Q  155 atccaa 160  Q
    ||||||    
T  35615832 atccaa 35615827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 56 - 160
Target Start/End: Complemental strand, 37874230 - 37874125
Alignment:
Q  56 atagtggttgagagattcatg-gagagagaatggttgggaaagatggtgagataaaaatctagcgttgagagactattgtaatagtgtgctctttatgtg 154  Q
    ||||||| |||||||  |||| |||||| | |||||||| ||||| || |||||||||||||| ||||||||||||||||||||||||| ||||| | ||    
T  37874230 atagtgggtgagagaggcatgtgagagaaagtggttggggaagatagtaagataaaaatctagtgttgagagactattgtaatagtgtgttctttgtatg 37874131  T
Q  155 atccaa 160  Q
    ||||||    
T  37874130 atccaa 37874125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 77 - 160
Target Start/End: Complemental strand, 48869913 - 48869830
Alignment:
Q  77 gagagagaatggttgggaaagatggtgagataaaaatctagcgttgagagactattgtaatagtgtgctctttatgtgatccaa 160  Q
    |||||| | |||||||| ||||| ||  ||||||||||||| ||||||||||||||||||||||||| ||||| | ||||||||    
T  48869913 gagagaaagtggttggggaagatagtatgataaaaatctagtgttgagagactattgtaatagtgtgttctttgtatgatccaa 48869830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 95 - 160
Target Start/End: Original strand, 17496084 - 17496149
Alignment:
Q  95 aagatggtgagataaaaatctagcgttgagagactattgtaatagtgtgctctttatgtgatccaa 160  Q
    ||||| || |||||| ||||||| || |||||||||||||||||||||| ||||||| ||||||||    
T  17496084 aagatagtaagataataatctagtgtggagagactattgtaatagtgtgttctttatatgatccaa 17496149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 170 - 221
Target Start/End: Complemental strand, 10459819 - 10459768
Alignment:
Q  170 aaaaacttgtgcatggtgcacaagtttaacacttgtgcaccctaaatgccac 221  Q
    ||||||||||| ||||||||||| ||||||| ||||||| ||||||||||||    
T  10459819 aaaaacttgtgtatggtgcacaaatttaacatttgtgcatcctaaatgccac 10459768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 224 - 356
Target Start/End: Complemental strand, 28084012 - 28083876
Alignment:
Q  224 tttggttgctttcgagtagagtttattttacctttataaatgattttacttgaagc----atttatagctcttgattattgaattgatttttactcacaa 319  Q
    |||||||| ||||||||||| || |||||  |||  ||| ||||| ||||||||||    |||| ||||| |||||| |  |||| |||||||| |||||    
T  28084012 tttggttgttttcgagtagaattgattttgtcttcgtaattgattctacttgaagctagaatttgtagcttttgattctataattaatttttacacacaa 28083913  T
Q  320 gtttaaagtttaactaacttttacatgaatatatcca 356  Q
     ||| ||||| | || |||||||||||||||||||||    
T  28083912 atttcaagttcagctcacttttacatgaatatatcca 28083876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 280 - 345
Target Start/End: Original strand, 7524134 - 7524199
Alignment:
Q  280 atttatagctcttgattattgaattgatttttactcacaagtttaaagtttaactaacttttacat 345  Q
    |||| ||||| |||||||| |||||||||||||| ||||| |||| |||| |||| ||||||||||    
T  7524134 atttgtagcttttgattatagaattgatttttacacacaaatttatagttcaactcacttttacat 7524199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 155 - 221
Target Start/End: Original strand, 38634943 - 38635009
Alignment:
Q  155 atccaagggtcaagaaaaaacttgtgcatggtgcacaagtttaacacttgtgcaccctaaatgccac 221  Q
    |||||| |||| | |||||||||||||||| ||||||| |||| || |||||||  |||||||||||    
T  38634943 atccaatggtccaaaaaaaacttgtgcatgatgcacaaatttatcaattgtgcatgctaaatgccac 38635009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 172 - 221
Target Start/End: Complemental strand, 48980755 - 48980706
Alignment:
Q  172 aaacttgtgcatggtgcacaagtttaacacttgtgcaccctaaatgccac 221  Q
    ||||||||| ||||||||||||||||  |||||||||  |||||||||||    
T  48980755 aaacttgtgaatggtgcacaagtttatgacttgtgcatgctaaatgccac 48980706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 176 - 221
Target Start/End: Complemental strand, 50137065 - 50137020
Alignment:
Q  176 ttgtgcatggtgcacaagtttaacacttgtgcaccctaaatgccac 221  Q
    ||||||||||||||||| |||||||||| ||||  |||||||||||    
T  50137065 ttgtgcatggtgcacaaatttaacacttatgcatactaaatgccac 50137020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 173 - 221
Target Start/End: Complemental strand, 8673710 - 8673662
Alignment:
Q  173 aacttgtgcatggtgcacaagtttaacacttgtgcaccctaaatgccac 221  Q
    |||||||| ||||||||||| |||||   ||||||||||||||||||||    
T  8673710 aacttgtgtatggtgcacaaatttaatgtttgtgcaccctaaatgccac 8673662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 162 - 218
Target Start/End: Original strand, 8674679 - 8674735
Alignment:
Q  162 ggtcaagaaaaaacttgtgcatggtgcacaagtttaacacttgtgcaccctaaatgc 218  Q
    |||||| | |||||||||| ||||||||||| | ||||| ||||||| |||||||||    
T  8674679 ggtcaaaataaaacttgtgtatggtgcacaaatctaacatttgtgcatcctaaatgc 8674735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 169 - 221
Target Start/End: Original strand, 27969896 - 27969948
Alignment:
Q  169 aaaaaacttgtgcatggtgcacaagtttaacacttgtgcaccctaaatgccac 221  Q
    |||||||||||| ||||||||||| ||||  | ||||||| ||||||||||||    
T  27969896 aaaaaacttgtgtatggtgcacaaatttagtatttgtgcatcctaaatgccac 27969948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 46; Significance: 4e-17; HSPs: 6)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 56 - 160
Target Start/End: Complemental strand, 9573801 - 9573696
Alignment:
Q  56 atagtggttgagagattcatg-gagagagaatggttgggaaagatggtgagataaaaatctagcgttgagagactattgtaatagtgtgctctttatgtg 154  Q
    ||||||| |||||||  |||| |||||| | |||||||| ||||| || |||||||||||||| |||||||||||||||||| |||||| ||||| | ||    
T  9573801 atagtgggtgagagaggcatgtgagagaaagtggttggggaagatagtaagataaaaatctagtgttgagagactattgtaacagtgtgttctttgtatg 9573702  T
Q  155 atccaa 160  Q
    ||||||    
T  9573701 atccaa 9573696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 173 - 221
Target Start/End: Complemental strand, 11768653 - 11768604
Alignment:
Q  173 aacttgtgcatggtgcacaagtttaac-acttgtgcaccctaaatgccac 221  Q
    |||||||||||||||||||| |||||| | ||||||||||||||||||||    
T  11768653 aacttgtgcatggtgcacaaatttaacaatttgtgcaccctaaatgccac 11768604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 280 - 351
Target Start/End: Original strand, 34910968 - 34911037
Alignment:
Q  280 atttatagctcttgattattgaattgatttttactcacaagtttaaagtttaactaacttttacatgaatat 351  Q
    |||| ||||| |||||| | ||||||||||| || |||||  ||| ||||||||||||||||||||||||||    
T  34910968 atttgtagcttttgattctagaattgattttgacacacaa--ttatagtttaactaacttttacatgaatat 34911037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 291 - 349
Target Start/End: Original strand, 3482078 - 3482136
Alignment:
Q  291 ttgattattgaattgatttttactcacaagtttaaagtttaactaacttttacatgaat 349  Q
    |||||| | ||||||||||| || |||||||||| |||| |||| ||||||||||||||    
T  3482078 ttgattttagaattgattttcacacacaagtttatagttcaacttacttttacatgaat 3482136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 284 - 356
Target Start/End: Complemental strand, 434297 - 434225
Alignment:
Q  284 atagctcttgattattgaattgatttttactcacaagtttaaagtttaactaacttttacatgaatatatcca 356  Q
    |||||| |||||| | |||||||||||||  || || |||||| || |||| ||||||||| |||||||||||    
T  434297 atagcttttgattttagaattgatttttatacataaatttaaatttcaactcacttttacacgaatatatcca 434225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 280 - 356
Target Start/End: Original strand, 16540128 - 16540204
Alignment:
Q  280 atttatagctcttgattattgaattgatttttactcacaagtttaaagtttaactaacttttacatgaatatatcca 356  Q
    |||| ||||| |||||||||||||||| ||| ||| |||  |||| |||| |||| |||||||||| ||| ||||||    
T  16540128 atttgtagcttttgattattgaattgagtttcacttacatatttatagttaaactcacttttacatcaatgtatcca 16540204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 44; Significance: 6e-16; HSPs: 2)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 77 - 160
Target Start/End: Complemental strand, 5276609 - 5276526
Alignment:
Q  77 gagagagaatggttgggaaagatggtgagataaaaatctagcgttgagagactattgtaatagtgtgctctttatgtgatccaa 160  Q
    |||||| | |||||||| ||||| || |||||||||||||| |||||||||||||||||| |||||| ||||| | ||||||||    
T  5276609 gagagaaagtggttggggaagatagtaagataaaaatctagtgttgagagactattgtaacagtgtgttctttgtatgatccaa 5276526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 176 - 221
Target Start/End: Complemental strand, 33473911 - 33473866
Alignment:
Q  176 ttgtgcatggtgcacaagtttaacacttgtgcaccctaaatgccac 221  Q
    ||||||||||||||||| |||||||||||||||  |||||||||||    
T  33473911 ttgtgcatggtgcacaaatttaacacttgtgcatactaaatgccac 33473866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 6)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 285 - 356
Target Start/End: Original strand, 40491604 - 40491675
Alignment:
Q  285 tagctcttgattattgaattgatttttactcacaagtttaaagtttaactaacttttacatgaatatatcca 356  Q
    ||||| |||||| | ||||||| |||||| ||||| |||||||||||||| |||||||||||||| ||||||    
T  40491604 tagcttttgattctagaattgacttttacacacaaatttaaagtttaactcacttttacatgaatgtatcca 40491675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 176 - 221
Target Start/End: Complemental strand, 11694843 - 11694798
Alignment:
Q  176 ttgtgcatggtgcacaagtttaacacttgtgcaccctaaatgccac 221  Q
    |||||||||||||||||||||||||||||||||  |||||||||||    
T  11694843 ttgtgcatggtgcacaagtttaacacttgtgcatactaaatgccac 11694798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 170 - 221
Target Start/End: Complemental strand, 21460182 - 21460131
Alignment:
Q  170 aaaaacttgtgcatggtgcacaagtttaacacttgtgcaccctaaatgccac 221  Q
    ||||||||||||||||| ||||| ||||||| ||||||| ||||||||||||    
T  21460182 aaaaacttgtgcatggtacacaaatttaacatttgtgcatcctaaatgccac 21460131  T

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Target: chr7; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 155 - 221
Target Start/End: Complemental strand, 19794464 - 19794398
Alignment:
Q  155 atccaagggtcaagaaaaaacttgtgcatggtgcacaagtttaacacttgtgcaccctaaatgccac 221  Q
    |||||| |||| | |||||||||||||||||||||||| |||| || |||||||  |||||||||||    
T  19794464 atccaatggtccaaaaaaaacttgtgcatggtgcacaaatttatcaattgtgcatgctaaatgccac 19794398  T

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Target: chr7; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 173 - 221
Target Start/End: Complemental strand, 45720774 - 45720726
Alignment:
Q  173 aacttgtgcatggtgcacaagtttaacacttgtgcaccctaaatgccac 221  Q
    |||||||||||||||||||| |||| || || |||||||||||||||||    
T  45720774 aacttgtgcatggtgcacaaatttatcatttatgcaccctaaatgccac 45720726  T

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Target: chr7; HSP #6
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 119 - 192
Target Start/End: Original strand, 19737904 - 19737977
Alignment:
Q  119 gttgagagactattgtaatagtgtgctctttatgtgatccaagggtcaagaaaaaacttgtgcatggtgcacaa 192  Q
    ||||||||||||||||||||||||| |  |||| ||||| || | |  | |||||| |||||||||||||||||    
T  19737904 gttgagagactattgtaatagtgtgtttcttatatgatctaatgatgtataaaaaatttgtgcatggtgcacaa 19737977  T

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Target: scaffold1037 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold1037
Description:

Target: scaffold1037; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 53 - 148
Target Start/End: Complemental strand, 2198 - 2102
Alignment:
Q  53 aagatagtggttgagagattcatg-gagagagaatggttgggaaagatggtgagataaaaatctagcgttgagagactattgtaatagtgtgctctt 148  Q
    ||||| |||| |||||||  |||| |||| ||| ||||||| |||||| || | ||||||||| || ||| ||||||||| ||||||||||| ||||    
T  2198 aagatggtgggtgagagagacatgtgagatagagtggttggaaaagatagtaatataaaaatccagtgttaagagactatagtaatagtgtgttctt 2102  T

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Target: scaffold1031 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold1031
Description:

Target: scaffold1031; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 53 - 148
Target Start/End: Complemental strand, 2316 - 2220
Alignment:
Q  53 aagatagtggttgagagattcatg-gagagagaatggttgggaaagatggtgagataaaaatctagcgttgagagactattgtaatagtgtgctctt 148  Q
    ||||| |||| |||||||  |||| |||| ||| ||||||| |||||| || | ||||||||| || ||| ||||||||| ||||||||||| ||||    
T  2316 aagatggtgggtgagagagacatgtgagatagagtggttggaaaagatagtaatataaaaatccagtgttaagagactatagtaatagtgtgttctt 2220  T

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