View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF3303_low_2 (Length: 251)

Name: NF3303_low_2
Description: NF3303
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF3303_low_2
NF3303_low_2
[»] chr5 (60 HSPs)
chr5 (31-96)||(10042798-10042863)
chr5 (31-89)||(29874676-29874734)
chr5 (31-95)||(40506804-40506868)
chr5 (31-97)||(2530091-2530157)
chr5 (31-95)||(42416806-42416870)
chr5 (31-97)||(789026-789092)
chr5 (31-97)||(790061-790127)
chr5 (31-97)||(8314835-8314901)
chr5 (31-97)||(24758988-24759054)
chr5 (31-97)||(28746318-28746384)
chr5 (31-97)||(39803853-39803919)
chr5 (31-97)||(42110694-42110760)
chr5 (31-97)||(43396526-43396592)
chr5 (31-86)||(19270911-19270966)
chr5 (31-90)||(31958391-31958449)
chr5 (31-90)||(42111816-42111875)
chr5 (31-97)||(665562-665628)
chr5 (31-97)||(2475274-2475340)
chr5 (31-97)||(4374857-4374923)
chr5 (31-97)||(6928360-6928426)
chr5 (35-97)||(16166292-16166354)
chr5 (39-97)||(19361664-19361722)
chr5 (31-97)||(31884665-31884731)
chr5 (31-97)||(32261715-32261781)
chr5 (35-97)||(37147077-37147139)
chr5 (31-97)||(40308346-40308412)
chr5 (36-97)||(35380505-35380566)
chr5 (33-97)||(5589467-5589531)
chr5 (33-97)||(25821231-25821295)
chr5 (31-95)||(36088584-36088648)
chr5 (31-90)||(24027867-24027926)
chr5 (31-89)||(1060711-1060768)
chr5 (31-97)||(3246835-3246901)
chr5 (35-97)||(7536655-7536717)
chr5 (31-97)||(16050774-16050840)
chr5 (31-97)||(26379220-26379286)
chr5 (31-97)||(27176476-27176542)
chr5 (31-97)||(31939835-31939901)
chr5 (35-97)||(36083804-36083866)
chr5 (45-97)||(14205433-14205485)
chr5 (35-86)||(43354523-43354573)
chr5 (35-85)||(28869363-28869413)
chr5 (31-89)||(29383735-29383793)
chr5 (31-97)||(42322882-42322948)
chr5 (31-95)||(3297827-3297891)
chr5 (42-90)||(15875758-15875806)
chr5 (31-86)||(28990949-28991005)
chr5 (45-97)||(29382576-29382628)
chr5 (31-86)||(3213242-3213296)
chr5 (31-86)||(14720186-14720241)
chr5 (31-97)||(30503532-30503598)
chr5 (31-97)||(30543875-30543941)
chr5 (56-97)||(30503759-30503800)
chr5 (56-97)||(30544102-30544143)
chr5 (42-90)||(2001506-2001554)
chr5 (46-86)||(20259072-20259112)
chr5 (42-87)||(36515068-36515113)
chr5 (53-90)||(39782986-39783023)
chr5 (35-67)||(2463651-2463683)
chr5 (39-83)||(36242337-36242381)
[»] chr3 (58 HSPs)
chr3 (31-95)||(48961128-48961192)
chr3 (31-97)||(12101464-12101530)
chr3 (31-97)||(35690212-35690278)
chr3 (31-95)||(47719493-47719557)
chr3 (31-97)||(7040890-7040956)
chr3 (31-97)||(39721268-39721334)
chr3 (31-97)||(43316516-43316582)
chr3 (31-97)||(50739163-50739229)
chr3 (31-97)||(50773626-50773692)
chr3 (31-95)||(2909441-2909505)
chr3 (31-95)||(44762725-44762789)
chr3 (31-90)||(46090125-46090184)
chr3 (31-90)||(54113421-54113480)
chr3 (31-97)||(14587387-14587453)
chr3 (31-97)||(20849404-20849470)
chr3 (31-97)||(38361759-38361825)
chr3 (35-95)||(36987740-36987800)
chr3 (35-95)||(37013179-37013239)
chr3 (31-97)||(13450281-13450347)
chr3 (31-97)||(29500341-29500407)
chr3 (31-97)||(30269084-30269150)
chr3 (31-97)||(33932486-33932552)
chr3 (31-97)||(41990764-41990830)
chr3 (31-97)||(45599267-45599333)
chr3 (31-97)||(48545118-48545184)
chr3 (31-97)||(54195682-54195748)
chr3 (31-97)||(54510387-54510453)
chr3 (33-97)||(52461038-52461102)
chr3 (31-90)||(37413578-37413637)
chr3 (31-90)||(42187756-42187815)
chr3 (31-86)||(46850722-46850777)
chr3 (31-97)||(4018925-4018991)
chr3 (31-97)||(7265064-7265130)
chr3 (31-97)||(13337108-13337173)
chr3 (35-97)||(15496470-15496532)
chr3 (31-97)||(19536716-19536782)
chr3 (35-97)||(20996334-20996396)
chr3 (31-97)||(26881630-26881696)
chr3 (31-97)||(35906684-35906750)
chr3 (31-97)||(36592216-36592282)
chr3 (31-97)||(53022675-53022741)
chr3 (31-97)||(54203746-54203812)
chr3 (37-90)||(33899842-33899895)
chr3 (31-90)||(12996819-12996877)
chr3 (31-90)||(50933213-50933272)
chr3 (35-97)||(46088720-46088782)
chr3 (31-97)||(54741812-54741878)
chr3 (41-86)||(10617639-10617684)
chr3 (31-95)||(29450668-29450732)
chr3 (31-97)||(22347079-22347146)
chr3 (31-90)||(52674792-52674850)
chr3 (39-86)||(54835743-54835790)
chr3 (31-97)||(46757568-46757633)
chr3 (46-90)||(8238921-8238965)
chr3 (58-95)||(34433542-34433579)
chr3 (32-68)||(875840-875876)
chr3 (35-83)||(32754161-32754208)
chr3 (63-95)||(35529858-35529890)
[»] scaffold0244 (1 HSPs)
scaffold0244 (31-97)||(7574-7640)
[»] chr4 (60 HSPs)
chr4 (31-97)||(22556971-22557037)
chr4 (31-97)||(41144305-41144371)
chr4 (190-251)||(45472295-45472356)
chr4 (31-97)||(8847945-8848011)
chr4 (31-97)||(17624667-17624733)
chr4 (31-97)||(23628842-23628908)
chr4 (31-97)||(36190059-36190125)
chr4 (31-97)||(7365803-7365869)
chr4 (31-97)||(11180915-11180981)
chr4 (31-97)||(24303803-24303869)
chr4 (31-97)||(26111385-26111451)
chr4 (31-97)||(34264632-34264698)
chr4 (31-97)||(43117525-43117591)
chr4 (35-97)||(46045795-46045857)
chr4 (31-90)||(26097658-26097717)
chr4 (31-90)||(40849735-40849794)
chr4 (31-97)||(1166646-1166712)
chr4 (31-97)||(1169128-1169194)
chr4 (31-97)||(6940178-6940244)
chr4 (31-97)||(7400209-7400275)
chr4 (31-97)||(10137883-10137949)
chr4 (31-97)||(11200840-11200906)
chr4 (31-97)||(13890996-13891062)
chr4 (31-97)||(17976454-17976520)
chr4 (31-97)||(18138342-18138408)
chr4 (31-97)||(28116843-28116909)
chr4 (31-97)||(32206596-32206662)
chr4 (31-97)||(40665528-40665593)
chr4 (31-97)||(40950952-40951018)
chr4 (31-97)||(49125552-49125618)
chr4 (31-97)||(53274635-53274701)
chr4 (31-97)||(55188177-55188243)
chr4 (31-97)||(55991826-55991892)
chr4 (35-87)||(32139419-32139471)
chr4 (45-97)||(40952041-40952093)
chr4 (39-95)||(51153499-51153555)
chr4 (31-90)||(32200723-32200782)
chr4 (35-90)||(39651746-39651801)
chr4 (34-97)||(51187627-51187690)
chr4 (35-97)||(8151213-8151274)
chr4 (31-97)||(11967004-11967070)
chr4 (31-97)||(27288474-27288540)
chr4 (39-97)||(28361493-28361551)
chr4 (31-97)||(37873646-37873712)
chr4 (31-89)||(55208496-55208554)
chr4 (31-90)||(8654322-8654380)
chr4 (31-90)||(20681202-20681261)
chr4 (31-90)||(29099632-29099691)
chr4 (31-97)||(346607-346673)
chr4 (37-87)||(25881932-25881982)
chr4 (36-86)||(29346238-29346287)
chr4 (36-86)||(35832002-35832051)
chr4 (31-90)||(30071348-30071407)
chr4 (31-82)||(19587920-19587969)
chr4 (31-86)||(24631113-24631167)
chr4 (31-82)||(26926954-26927004)
chr4 (31-73)||(45472461-45472503)
chr4 (42-83)||(41105971-41106012)
chr4 (46-83)||(41986296-41986333)
chr4 (46-86)||(9097481-9097521)
[»] chr6 (27 HSPs)
chr6 (33-97)||(17505496-17505560)
chr6 (31-97)||(173062-173128)
chr6 (31-97)||(28472229-28472295)
chr6 (31-97)||(34247755-34247821)
chr6 (31-95)||(10945717-10945781)
chr6 (31-97)||(5414562-5414628)
chr6 (31-97)||(24162800-24162866)
chr6 (31-87)||(6833559-6833615)
chr6 (31-87)||(29859417-29859473)
chr6 (31-90)||(6018581-6018640)
chr6 (31-97)||(559735-559801)
chr6 (31-97)||(3850233-3850299)
chr6 (31-97)||(18593610-18593676)
chr6 (31-97)||(20791554-20791620)
chr6 (31-97)||(24046560-24046626)
chr6 (35-97)||(29043219-29043281)
chr6 (31-89)||(32244385-32244443)
chr6 (31-97)||(34207003-34207069)
chr6 (31-96)||(33945824-33945889)
chr6 (31-97)||(7541113-7541179)
chr6 (41-97)||(19988908-19988964)
chr6 (31-82)||(33976010-33976060)
chr6 (31-86)||(8866971-8867026)
chr6 (31-86)||(3053926-3053980)
chr6 (31-90)||(18314014-18314072)
chr6 (47-86)||(34319168-34319207)
chr6 (64-96)||(10943150-10943182)
[»] chr7 (47 HSPs)
chr7 (34-97)||(4400065-4400128)
chr7 (31-97)||(44651882-44651948)
chr7 (31-97)||(18956298-18956364)
chr7 (31-97)||(41343320-41343386)
chr7 (31-95)||(45620656-45620720)
chr7 (31-90)||(4406634-4406693)
chr7 (31-86)||(4615399-4615454)
chr7 (34-97)||(47840740-47840803)
chr7 (31-97)||(10999119-10999185)
chr7 (31-97)||(12907918-12907984)
chr7 (31-97)||(17278161-17278227)
chr7 (39-97)||(21134356-21134414)
chr7 (31-97)||(27031229-27031295)
chr7 (31-97)||(29448717-29448783)
chr7 (31-97)||(32960796-32960862)
chr7 (31-97)||(40239897-40239963)
chr7 (31-97)||(41426970-41427036)
chr7 (37-86)||(3840030-3840079)
chr7 (31-97)||(5526114-5526177)
chr7 (31-95)||(23639417-23639481)
chr7 (31-95)||(37669271-37669335)
chr7 (31-90)||(20482286-20482345)
chr7 (31-90)||(40789186-40789245)
chr7 (31-97)||(1448107-1448173)
chr7 (31-97)||(6607103-6607169)
chr7 (39-81)||(35910287-35910329)
chr7 (31-97)||(36769232-36769298)
chr7 (31-97)||(38045664-38045730)
chr7 (31-84)||(4404301-4404354)
chr7 (39-96)||(5483420-5483477)
chr7 (36-97)||(43156203-43156264)
chr7 (41-97)||(36765592-36765648)
chr7 (36-86)||(17816601-17816650)
chr7 (36-86)||(19050351-19050400)
chr7 (41-90)||(40036034-40036083)
chr7 (31-83)||(4492448-4492500)
chr7 (31-90)||(4408043-4408101)
chr7 (43-97)||(23154654-23154707)
chr7 (34-74)||(20135099-20135139)
chr7 (31-82)||(20762921-20762971)
chr7 (31-73)||(16933493-16933535)
chr7 (31-73)||(16938876-16938918)
chr7 (31-73)||(43111041-43111083)
chr7 (46-83)||(42828895-42828932)
chr7 (35-87)||(38049247-38049299)
chr7 (46-86)||(42915378-42915418)
chr7 (46-86)||(47171662-47171702)
[»] scaffold0198 (1 HSPs)
scaffold0198 (31-97)||(15261-15327)
[»] chr8 (58 HSPs)
chr8 (31-97)||(6816039-6816105)
chr8 (31-97)||(11924775-11924841)
chr8 (31-97)||(36059276-36059342)
chr8 (31-97)||(36216576-36216642)
chr8 (31-97)||(37034832-37034898)
chr8 (31-97)||(38139319-38139385)
chr8 (31-95)||(38137721-38137785)
chr8 (31-97)||(38909294-38909360)
chr8 (31-89)||(39486036-39486094)
chr8 (31-97)||(44908503-44908569)
chr8 (31-90)||(41360997-41361056)
chr8 (31-97)||(169705-169771)
chr8 (31-97)||(1877578-1877644)
chr8 (31-97)||(7219386-7219452)
chr8 (31-97)||(16239168-16239234)
chr8 (31-97)||(17046010-17046076)
chr8 (31-97)||(17313541-17313607)
chr8 (31-97)||(39525460-39525526)
chr8 (31-97)||(39685430-39685496)
chr8 (31-97)||(43817964-43818030)
chr8 (31-97)||(44602938-44603004)
chr8 (32-97)||(27467720-27467785)
chr8 (35-90)||(12261476-12261532)
chr8 (31-87)||(26518805-26518861)
chr8 (37-84)||(9275854-9275901)
chr8 (38-97)||(41526324-41526383)
chr8 (31-97)||(2184410-2184476)
chr8 (35-97)||(11579204-11579266)
chr8 (31-97)||(14718874-14718940)
chr8 (31-97)||(34805796-34805862)
chr8 (31-97)||(42844287-42844352)
chr8 (41-97)||(14449611-14449667)
chr8 (42-90)||(27748853-27748901)
chr8 (42-90)||(27877985-27878033)
chr8 (42-90)||(28018166-28018214)
chr8 (31-87)||(44655074-44655130)
chr8 (31-97)||(2190647-2190713)
chr8 (31-97)||(16845035-16845101)
chr8 (31-89)||(34997538-34997596)
chr8 (35-97)||(42984002-42984064)
chr8 (31-88)||(34325870-34325927)
chr8 (42-86)||(24511538-24511582)
chr8 (42-90)||(27914929-27914977)
chr8 (42-90)||(27961348-27961396)
chr8 (35-97)||(15310407-15310470)
chr8 (35-97)||(15490776-15490839)
chr8 (39-90)||(45139057-45139108)
chr8 (31-86)||(1922396-1922448)
chr8 (40-97)||(39997991-39998048)
chr8 (31-82)||(30550970-30551020)
chr8 (31-82)||(44215719-44215769)
chr8 (42-92)||(41903133-41903183)
chr8 (35-95)||(40048678-40048739)
chr8 (46-86)||(19245451-19245491)
chr8 (46-86)||(19318635-19318675)
chr8 (43-83)||(39140812-39140852)
chr8 (46-86)||(41904778-41904818)
chr8 (46-86)||(45296796-45296836)
[»] chr2 (31 HSPs)
chr2 (31-97)||(3243295-3243361)
chr2 (31-97)||(10120618-10120684)
chr2 (31-97)||(36078556-36078622)
chr2 (31-97)||(38879145-38879211)
chr2 (31-95)||(34912660-34912724)
chr2 (35-90)||(38709708-38709763)
chr2 (31-90)||(9799332-9799391)
chr2 (31-97)||(970962-971028)
chr2 (31-97)||(1835694-1835760)
chr2 (39-97)||(2180035-2180093)
chr2 (31-97)||(3079726-3079792)
chr2 (31-97)||(3324264-3324330)
chr2 (31-97)||(5166275-5166341)
chr2 (31-97)||(7233032-7233098)
chr2 (31-97)||(7274679-7274745)
chr2 (31-97)||(8878128-8878194)
chr2 (31-97)||(18166833-18166899)
chr2 (31-97)||(24926085-24926151)
chr2 (31-97)||(31972291-31972357)
chr2 (31-97)||(35423795-35423861)
chr2 (31-97)||(36085947-36086013)
chr2 (31-97)||(40202224-40202290)
chr2 (35-97)||(41452828-41452890)
chr2 (35-97)||(45474735-45474797)
chr2 (31-97)||(1117987-1118055)
chr2 (31-95)||(4631217-4631281)
chr2 (35-90)||(17032820-17032875)
chr2 (31-97)||(668294-668360)
chr2 (31-97)||(8683668-8683734)
chr2 (32-89)||(37522706-37522763)
chr2 (53-97)||(20313248-20313292)
[»] chr1 (53 HSPs)
chr1 (31-97)||(24473551-24473617)
chr1 (31-97)||(43119114-43119180)
chr1 (31-97)||(11754228-11754294)
chr1 (31-97)||(33818094-33818160)
chr1 (31-97)||(33877562-33877628)
chr1 (31-89)||(34652283-34652341)
chr1 (31-97)||(38802314-38802380)
chr1 (31-97)||(39879140-39879206)
chr1 (31-96)||(36952714-36952779)
chr1 (31-87)||(31638425-31638481)
chr1 (31-90)||(46040493-46040552)
chr1 (31-97)||(11583165-11583231)
chr1 (31-97)||(17585524-17585590)
chr1 (31-97)||(25659810-25659876)
chr1 (31-97)||(33373820-33373886)
chr1 (31-97)||(33642619-33642685)
chr1 (31-97)||(33895217-33895283)
chr1 (31-97)||(39327043-39327109)
chr1 (31-97)||(41901700-41901766)
chr1 (35-97)||(43123051-43123113)
chr1 (31-97)||(45104189-45104255)
chr1 (31-97)||(46588091-46588157)
chr1 (31-97)||(47037131-47037197)
chr1 (31-96)||(43120780-43120845)
chr1 (35-95)||(34078295-34078355)
chr1 (39-95)||(39729206-39729262)
chr1 (31-90)||(40432210-40432269)
chr1 (31-97)||(1322525-1322591)
chr1 (31-97)||(3265125-3265191)
chr1 (31-97)||(7833554-7833620)
chr1 (31-97)||(9574870-9574936)
chr1 (31-97)||(14487324-14487390)
chr1 (31-97)||(17249044-17249110)
chr1 (31-97)||(33831925-33831991)
chr1 (31-97)||(33894087-33894153)
chr1 (31-97)||(36165521-36165587)
chr1 (39-95)||(17366355-17366411)
chr1 (38-97)||(16097358-16097417)
chr1 (31-86)||(18091283-18091337)
chr1 (32-90)||(23730302-23730359)
chr1 (41-95)||(33932934-33932988)
chr1 (35-88)||(43124366-43124419)
chr1 (45-97)||(7308331-7308383)
chr1 (31-86)||(11606478-11606533)
chr1 (35-86)||(49223163-49223213)
chr1 (35-97)||(49571214-49571276)
chr1 (37-86)||(15845769-15845817)
chr1 (54-97)||(31215864-31215907)
chr1 (54-97)||(31221619-31221662)
chr1 (37-84)||(44065455-44065502)
chr1 (46-83)||(16033105-16033142)
chr1 (46-90)||(17670009-17670053)
chr1 (46-86)||(28568765-28568805)
[»] scaffold0166 (1 HSPs)
scaffold0166 (31-97)||(1482-1548)
[»] scaffold0768 (1 HSPs)
scaffold0768 (31-87)||(6313-6369)
[»] scaffold0024 (2 HSPs)
scaffold0024 (31-95)||(90463-90527)
scaffold0024 (39-95)||(110529-110585)
[»] scaffold0197 (1 HSPs)
scaffold0197 (31-97)||(25716-25782)
[»] scaffold0481 (2 HSPs)
scaffold0481 (31-97)||(4512-4578)
scaffold0481 (31-97)||(7456-7522)
[»] scaffold0178 (1 HSPs)
scaffold0178 (31-97)||(7292-7358)
[»] scaffold0078 (1 HSPs)
scaffold0078 (37-90)||(5739-5793)
[»] scaffold0318 (1 HSPs)
scaffold0318 (42-90)||(1072-1120)
[»] scaffold0027 (1 HSPs)
scaffold0027 (35-95)||(138031-138091)
[»] scaffold0003 (1 HSPs)
scaffold0003 (42-90)||(229101-229149)
[»] scaffold0020 (1 HSPs)
scaffold0020 (31-97)||(132665-132730)
[»] scaffold1793 (1 HSPs)
scaffold1793 (42-86)||(278-322)
[»] scaffold0016 (1 HSPs)
scaffold0016 (35-83)||(99393-99440)
[»] scaffold0010 (2 HSPs)
scaffold0010 (46-86)||(50268-50308)
scaffold0010 (46-86)||(57801-57841)


Alignment Details
Target: chr5 (Bit Score: 62; Significance: 7e-27; HSPs: 60)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 31 - 96
Target Start/End: Original strand, 10042798 - 10042863
Alignment:
Q  31 taataaattcaaagttttgtataatattttgtcaaacaacttttaacttaaaaataacttcagaac 96  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  10042798 taataaattcaaagttttgtacaatattttgtcaaacaacttttaacttaaaaataacttcagaac 10042863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 31 - 89
Target Start/End: Complemental strand, 29874734 - 29874676
Alignment:
Q  31 taataaattcaaagttttgtataatattttgtcaaacaacttttaacttaaaaataact 89  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29874734 taataaattcaaagttttgtataatattttgtcaaacaacttttaacttaaaaataact 29874676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 31 - 95
Target Start/End: Complemental strand, 40506868 - 40506804
Alignment:
Q  31 taataaattcaaagttttgtataatattttgtcaaacaacttttaacttaaaaataacttcagaa 95  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||    
T  40506868 taataaattcaaagttttgtacaatattttgtcaaacaacttttaacttaaaaataacttaagaa 40506804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 31 - 97
Target Start/End: Original strand, 2530091 - 2530157
Alignment:
Q  31 taataaattcaaagttttgtataatattttgtcaaacaacttttaacttaaaaataacttcagaact 97  Q
    ||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||| ||||||    
T  2530091 taataaattcaaagttttgtacaatattttgccaaacaacttttaacttaaaaataactttagaact 2530157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 31 - 95
Target Start/End: Original strand, 42416806 - 42416870
Alignment:
Q  31 taataaattcaaagttttgtataatattttgtcaaacaacttttaacttaaaaataacttcagaa 95  Q
    ||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||| ||||    
T  42416806 taataaattcaaagttttgtacaatattttgtgaaacaacttttaacttaaaaataactttagaa 42416870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 31 - 97
Target Start/End: Complemental strand, 789092 - 789026
Alignment:
Q  31 taataaattcaaagttttgtataatattttgtcaaacaacttttaacttaaaaataacttcagaact 97  Q
    ||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||| || ||||||    
T  789092 taataaattcaaagttttgtacaatattttgccaaacaacttttaacttaaaaataattttagaact 789026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 31 - 97
Target Start/End: Complemental strand, 790127 - 790061
Alignment:
Q  31 taataaattcaaagttttgtataatattttgtcaaacaacttttaacttaaaaataacttcagaact 97  Q
    ||||||||||| ||||||||| |||||||| ||||||||||||||||||||||||||||| ||||||    
T  790127 taataaattcatagttttgtacaatattttttcaaacaacttttaacttaaaaataactttagaact 790061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 31 - 97
Target Start/End: Original strand, 8314835 - 8314901
Alignment:
Q  31 taataaattcaaagttttgtataatattttgtcaaacaacttttaacttaaaaataacttcagaact 97  Q
    |||||||||||||||||||||||||||||||  |||||||||||||||||||||||| || ||||||    
T  8314835 taataaattcaaagttttgtataatattttgcaaaacaacttttaacttaaaaataattttagaact 8314901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 31 - 97
Target Start/End: Original strand, 24758988 - 24759054
Alignment:
Q  31 taataaattcaaagttttgtataatattttgtcaaacaacttttaacttaaaaataacttcagaact 97  Q
    ||||||||||||||||||||||||||||||| |||||| ||||||||| ||||||||||| ||||||    
T  24758988 taataaattcaaagttttgtataatattttgccaaacagcttttaactcaaaaataactttagaact 24759054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 31 - 97
Target Start/End: Complemental strand, 28746384 - 28746318
Alignment:
Q  31 taataaattcaaagttttgtataatattttgtcaaacaacttttaacttaaaaataacttcagaact 97  Q
    |||||||||||||||||| || ||||||||| |||||||||||||||||||||||||||| ||||||    
T  28746384 taataaattcaaagttttatacaatattttgccaaacaacttttaacttaaaaataactttagaact 28746318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 31 - 97
Target Start/End: Complemental strand, 39803919 - 39803853
Alignment:
Q  31 taataaattcaaagttttgtataatattttgtcaaacaacttttaacttaaaaataacttcagaact 97  Q
    ||||||||||||||||||||| ||||||||| |||||||| ||||||||||||||||||| ||||||    
T  39803919 taataaattcaaagttttgtacaatattttgccaaacaacgtttaacttaaaaataactttagaact 39803853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 31 - 97
Target Start/End: Original strand, 42110694 - 42110760
Alignment:
Q  31 taataaattcaaagttttgtataatattttgtcaaacaacttttaacttaaaaataacttcagaact 97  Q
    ||||||||||||||||||||| ||||||||| |||||| ||||||||||||||||||||| ||||||    
T  42110694 taataaattcaaagttttgtacaatattttgccaaacagcttttaacttaaaaataactttagaact 42110760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 31 - 97
Target Start/End: Original strand, 43396526 - 43396592
Alignment:
Q  31 taataaattcaaagttttgtataatattttgtcaaacaacttttaacttaaaaataacttcagaact 97  Q
    ||||||||||||||||||||| ||||||||| |||||||||| ||||||||||||||||| ||||||    
T  43396526 taataaattcaaagttttgtacaatattttgccaaacaacttctaacttaaaaataactttagaact 43396592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 31 - 86
Target Start/End: Original strand, 19270911 - 19270966
Alignment:
Q  31 taataaattcaaagttttgtataatattttgtcaaacaacttttaacttaaaaata 86  Q
    ||||||||||||||||||||||||||||||| |||||||| |||||||||||||||    
T  19270911 taataaattcaaagttttgtataatattttgccaaacaacctttaacttaaaaata 19270966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 31 - 90
Target Start/End: Complemental strand, 31958449 - 31958391
Alignment:
Q  31 taataaattcaaagttttgtataatattttgtcaaacaacttttaacttaaaaataactt 90  Q
    ||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||    
T  31958449 taataaattcaaagttt-gtacaatattttgtcaaacaacttttaacttaaaaataactt 31958391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 31 - 90
Target Start/End: Complemental strand, 42111875 - 42111816
Alignment:
Q  31 taataaattcaaagttttgtataatattttgtcaaacaacttttaacttaaaaataactt 90  Q
    ||||||||||||||||||||| ||||||||| ||||||||||||||||||| ||||||||    
T  42111875 taataaattcaaagttttgtacaatattttgccaaacaacttttaacttaacaataactt 42111816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 31 - 97
Target Start/End: Complemental strand, 665628 - 665562
Alignment:
Q  31 taataaattcaaagttttgtataatattttgtcaaacaacttttaacttaaaaataacttcagaact 97  Q
    ||||||||||||||||||||||||||||||| | |||| ||||||||| ||||||||||| ||||||    
T  665628 taataaattcaaagttttgtataatattttgccgaacagcttttaactcaaaaataactttagaact 665562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 31 - 97
Target Start/End: Complemental strand, 2475340 - 2475274
Alignment:
Q  31 taataaattcaaagttttgtataatattttgtcaaacaacttttaacttaaaaataacttcagaact 97  Q
    ||||||||||||||||||||| ||||||||| |||||| ||||||||| ||||||||||| ||||||    
T  2475340 taataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 2475274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 31 - 97
Target Start/End: Complemental strand, 4374923 - 4374857
Alignment:
Q  31 taataaattcaaagttttgtataatattttgtcaaacaacttttaacttaaaaataacttcagaact 97  Q
    ||||||||||||||||||||| ||||| ||| |||||||||||||||| ||||||||||| ||||||    
T  4374923 taataaattcaaagttttgtacaatatcttgccaaacaacttttaactcaaaaataactttagaact 4374857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 31 - 97
Target Start/End: Complemental strand, 6928426 - 6928360
Alignment:
Q  31 taataaattcaaagttttgtataatattttgtcaaacaacttttaacttaaaaataacttcagaact 97  Q
    ||||||||||||||||||||| ||||||||| |||||| ||||||||| ||||||||||| ||||||    
T  6928426 taataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 6928360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 35 - 97
Target Start/End: Complemental strand, 16166354 - 16166292
Alignment:
Q  35 aaattcaaagttttgtataatattttgtcaaacaacttttaacttaaaaataacttcagaact 97  Q
    ||||||||||||||||| |||||||||||||| |||||||||||||||||||| || ||||||    
T  16166354 aaattcaaagttttgtacaatattttgtcaaataacttttaacttaaaaataattttagaact 16166292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 39 - 97
Target Start/End: Original strand, 19361664 - 19361722
Alignment:
Q  39 tcaaagttttgtataatattttgtcaaacaacttttaacttaaaaataacttcagaact 97  Q
    ||||||||||||| ||||||||| |||||||||||||||||||||||||||| ||||||    
T  19361664 tcaaagttttgtacaatattttgccaaacaacttttaacttaaaaataactttagaact 19361722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 31 - 97
Target Start/End: Complemental strand, 31884731 - 31884665
Alignment:
Q  31 taataaattcaaagttttgtataatattttgtcaaacaacttttaacttaaaaataacttcagaact 97  Q
    ||||||||||||||||||||| ||||||||| |||||| ||||||||| ||||||||||| ||||||    
T  31884731 taataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 31884665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 31 - 97
Target Start/End: Complemental strand, 32261781 - 32261715
Alignment:
Q  31 taataaattcaaagttttgtataatattttgtcaaacaacttttaacttaaaaataacttcagaact 97  Q
    ||||||||||||||||||||| |||||||| ||||||| ||||||||| ||||||||||| ||||||    
T  32261781 taataaattcaaagttttgtacaatattttatcaaacagcttttaactcaaaaataactttagaact 32261715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 35 - 97
Target Start/End: Original strand, 37147077 - 37147139
Alignment:
Q  35 aaattcaaagttttgtataatattttgtcaaacaacttttaacttaaaaataacttcagaact 97  Q
    |||||| |||||||||| ||||||||| |||||||||||||||||||||||||||| ||||||    
T  37147077 aaattcgaagttttgtacaatattttgccaaacaacttttaacttaaaaataactttagaact 37147139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 31 - 97
Target Start/End: Original strand, 40308346 - 40308412
Alignment:
Q  31 taataaattcaaagttttgtataatattttgtcaaacaacttttaacttaaaaataacttcagaact 97  Q
    ||||||||||||||||||||| | ||||||| |||||| ||||||||||||||||||||| ||||||    
T  40308346 taataaattcaaagttttgtacactattttgccaaacagcttttaacttaaaaataactttagaact 40308412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 36 - 97
Target Start/End: Complemental strand, 35380566 - 35380505
Alignment:
Q  36 aattcaaagttttgtataatattttgtcaaacaacttttaacttaaaaataacttcagaact 97  Q
    ||||||| |||||||||||||||||| ||||||||||||||||||||| |||||| ||||||    
T  35380566 aattcaatgttttgtataatattttgccaaacaacttttaacttaaaattaactttagaact 35380505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 33 - 97
Target Start/End: Complemental strand, 5589531 - 5589467
Alignment:
Q  33 ataaattcaaagttttgtataatattttgtcaaacaacttttaacttaaaaataacttcagaact 97  Q
    ||||||||||| ||||||| |||||||||||||||| ||||||||| ||||||||||| ||||||    
T  5589531 ataaattcaaaattttgtacaatattttgtcaaacagcttttaactcaaaaataactttagaact 5589467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 33 - 97
Target Start/End: Original strand, 25821231 - 25821295
Alignment:
Q  33 ataaattcaaagttttgtataatattttgtcaaacaacttttaacttaaaaataacttcagaact 97  Q
    ||||||||||||||||||| ||||||||| |||||| ||||||||| ||||||||||| ||||||    
T  25821231 ataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 25821295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 31 - 95
Target Start/End: Original strand, 36088584 - 36088648
Alignment:
Q  31 taataaattcaaagttttgtataatattttgtcaaacaacttttaacttaaaaataacttcagaa 95  Q
    ||||||||||||||||||| | |||||||||||||||| ||||| ||||||||||||||| ||||    
T  36088584 taataaattcaaagttttgaacaatattttgtcaaacagctttttacttaaaaataactttagaa 36088648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 31 - 90
Target Start/End: Complemental strand, 24027926 - 24027867
Alignment:
Q  31 taataaattcaaagttttgtataatattttgtcaaacaacttttaacttaaaaataactt 90  Q
    ||||||||||||||||||||| ||||||||| |||||| ||||||||| |||||||||||    
T  24027926 taataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactt 24027867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 31 - 89
Target Start/End: Original strand, 1060711 - 1060768
Alignment:
Q  31 taataaattcaaagttttgtataatattttgtcaaacaacttttaacttaaaaataact 89  Q
    ||||||||||||||||| ||| ||||||||||||||||| |||||||||||||||||||    
T  1060711 taataaattcaaagttt-gtacaatattttgtcaaacaatttttaacttaaaaataact 1060768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 31 - 97
Target Start/End: Original strand, 3246835 - 3246901
Alignment:
Q  31 taataaattcaaagttttgtataatattttgtcaaacaacttttaacttaaaaataacttcagaact 97  Q
    ||||||||| || |||||||| ||||||||| |||||||||| ||||||||||||||||| ||||||    
T  3246835 taataaatttaatgttttgtacaatattttgccaaacaacttgtaacttaaaaataactttagaact 3246901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 35 - 97
Target Start/End: Original strand, 7536655 - 7536717
Alignment:
Q  35 aaattcaaagttttgtataatattttgtcaaacaacttttaacttaaaaataacttcagaact 97  Q
    |||||||| |||||||| |||||||||  ||||||||||||||||||||||||||| ||||||    
T  7536655 aaattcaatgttttgtacaatattttgctaaacaacttttaacttaaaaataactttagaact 7536717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 31 - 97
Target Start/End: Complemental strand, 16050840 - 16050774
Alignment:
Q  31 taataaattcaaagttttgtataatattttgtcaaacaacttttaacttaaaaataacttcagaact 97  Q
    |||||| |||||||||||||| ||||||||| |||||| ||||||||| ||||||||||| ||||||    
T  16050840 taataatttcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 16050774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 31 - 97
Target Start/End: Original strand, 26379220 - 26379286
Alignment:
Q  31 taataaattcaaagttttgtataatattttgtcaaacaacttttaacttaaaaataacttcagaact 97  Q
    ||||||||||||| ||||||| ||||||||| |||||| ||||||||| ||||||||||| ||||||    
T  26379220 taataaattcaaaattttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 26379286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 31 - 97
Target Start/End: Complemental strand, 27176542 - 27176476
Alignment:
Q  31 taataaattcaaagttttgtataatattttgtcaaacaacttttaacttaaaaataacttcagaact 97  Q
    ||||||||||||||||||||| ||||||||| |||| | ||||||||| ||||||||||| ||||||    
T  27176542 taataaattcaaagttttgtacaatattttgccaaatagcttttaactcaaaaataactttagaact 27176476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 31 - 97
Target Start/End: Complemental strand, 31939901 - 31939835
Alignment:
Q  31 taataaattcaaagttttgtataatattttgtcaaacaacttttaacttaaaaataacttcagaact 97  Q
    ||||||||||||||||||||| ||||||||| |||||  ||||||||| ||||||||||| ||||||    
T  31939901 taataaattcaaagttttgtacaatattttgccaaactgcttttaactcaaaaataactttagaact 31939835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 35 - 97
Target Start/End: Original strand, 36083804 - 36083866
Alignment:
Q  35 aaattcaaagttttgtataatattttgtcaaacaacttttaacttaaaaataacttcagaact 97  Q
    ||||||||||||||||| ||||||||| |||||| |||||| |||||||||||||| ||||||    
T  36083804 aaattcaaagttttgtacaatattttgccaaacagcttttagcttaaaaataactttagaact 36083866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 45 - 97
Target Start/End: Original strand, 14205433 - 14205485
Alignment:
Q  45 ttttgtataatattttgtcaaacaacttttaacttaaaaataacttcagaact 97  Q
    ||||||||||||||||| |||||||||||||| ||||||||||||| ||||||    
T  14205433 ttttgtataatattttgccaaacaacttttaaattaaaaataactttagaact 14205485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 35 - 86
Target Start/End: Original strand, 43354523 - 43354573
Alignment:
Q  35 aaattcaaagttttgtataatattttgtcaaacaacttttaacttaaaaata 86  Q
    ||||||||||||| ||| ||||||||||||||||||||||||||||||||||    
T  43354523 aaattcaaagttt-gtacaatattttgtcaaacaacttttaacttaaaaata 43354573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 35 - 85
Target Start/End: Original strand, 28869363 - 28869413
Alignment:
Q  35 aaattcaaagttttgtataatattttgtcaaacaacttttaacttaaaaat 85  Q
    ||||| ||| ||||||| |||||||||||||||||||||||||||||||||    
T  28869363 aaatttaaatttttgtacaatattttgtcaaacaacttttaacttaaaaat 28869413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 31 - 89
Target Start/End: Complemental strand, 29383793 - 29383735
Alignment:
Q  31 taataaattcaaagttttgtataatattttgtcaaacaacttttaacttaaaaataact 89  Q
    |||||||||||||||||| || ||| |||||||||||| ||||||||| ||||||||||    
T  29383793 taataaattcaaagttttttacaatgttttgtcaaacagcttttaactcaaaaataact 29383735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 31 - 97
Target Start/End: Original strand, 42322882 - 42322948
Alignment:
Q  31 taataaattcaaagttttgtataatattttgtcaaacaacttttaacttaaaaataacttcagaact 97  Q
    ||||||||||||||||||||| ||||||||   ||||| ||||||||| ||||||||||| ||||||    
T  42322882 taataaattcaaagttttgtacaatattttacgaaacagcttttaactcaaaaataactttagaact 42322948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 31 - 95
Target Start/End: Complemental strand, 3297891 - 3297827
Alignment:
Q  31 taataaattcaaagttttgtataatattttgtcaaacaacttttaacttaaaaataacttcagaa 95  Q
    |||||||||||||||||| || | ||||||| |||||| ||||||||| ||||||||||| ||||    
T  3297891 taataaattcaaagttttatacattattttgccaaacagcttttaactcaaaaataactttagaa 3297827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 42 - 90
Target Start/End: Complemental strand, 15875806 - 15875758
Alignment:
Q  42 aagttttgtataatattttgtcaaacaacttttaacttaaaaataactt 90  Q
    |||||||||| |||||||||  |||||||||||||||||||||||||||    
T  15875806 aagttttgtacaatattttgctaaacaacttttaacttaaaaataactt 15875758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 31 - 86
Target Start/End: Complemental strand, 28991005 - 28990949
Alignment:
Q  31 taataaattcaaagttttgtataatattttgtcaaacaac-ttttaacttaaaaata 86  Q
    ||||||||||||||||||||| ||||||||| |||||||| |||||||| |||||||    
T  28991005 taataaattcaaagttttgtacaatattttgccaaacaactttttaactaaaaaata 28990949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 45 - 97
Target Start/End: Complemental strand, 29382628 - 29382576
Alignment:
Q  45 ttttgtataatattttgtcaaacaacttttaacttaaaaataacttcagaact 97  Q
    |||||||  |||||||| |||||||||||||||||||||||||||| ||||||    
T  29382628 ttttgtactatattttgccaaacaacttttaacttaaaaataactttagaact 29382576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 31 - 86
Target Start/End: Complemental strand, 3213296 - 3213242
Alignment:
Q  31 taataaattcaaagttttgtataatattttgtcaaacaacttttaacttaaaaata 86  Q
    ||||||||||||||||| ||| |||||||||||||||||| |||||||| ||||||    
T  3213296 taataaattcaaagttt-gtacaatattttgtcaaacaacatttaactttaaaata 3213242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 31 - 86
Target Start/End: Original strand, 14720186 - 14720241
Alignment:
Q  31 taataaattcaaagttttgtataatattttgtcaaacaacttttaacttaaaaata 86  Q
    ||||||||||||||||||||| ||||||||  |||||||||| || ||||||||||    
T  14720186 taataaattcaaagttttgtacaatattttcccaaacaacttctatcttaaaaata 14720241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 31 - 97
Target Start/End: Complemental strand, 30503598 - 30503532
Alignment:
Q  31 taataaattcaaagttttgtataatattttgtcaaacaacttttaacttaaaaataacttcagaact 97  Q
    ||||||||| ||| ||||||| |||||||||  ||| || |||||||||||||||||||| ||||||    
T  30503598 taataaatttaaaattttgtacaatattttgctaaataatttttaacttaaaaataactttagaact 30503532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 31 - 97
Target Start/End: Complemental strand, 30543941 - 30543875
Alignment:
Q  31 taataaattcaaagttttgtataatattttgtcaaacaacttttaacttaaaaataacttcagaact 97  Q
    ||||||||| ||| ||||||| |||||||||  ||| || |||||||||||||||||||| ||||||    
T  30543941 taataaatttaaaattttgtacaatattttgctaaataatttttaacttaaaaataactttagaact 30543875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 56 - 97
Target Start/End: Complemental strand, 30503800 - 30503759
Alignment:
Q  56 attttgtcaaacaacttttaacttaaaaataacttcagaact 97  Q
    |||||| |||||||||||||||||||||||||||| ||||||    
T  30503800 attttgccaaacaacttttaacttaaaaataactttagaact 30503759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 56 - 97
Target Start/End: Complemental strand, 30544143 - 30544102
Alignment:
Q  56 attttgtcaaacaacttttaacttaaaaataacttcagaact 97  Q
    |||||| |||||||||||||||||||||||||||| ||||||    
T  30544143 attttgccaaacaacttttaacttaaaaataactttagaact 30544102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 42 - 90
Target Start/End: Original strand, 2001506 - 2001554
Alignment:
Q  42 aagttttgtataatattttgtcaaacaacttttaacttaaaaataactt 90  Q
    |||||||||| | ||||||  ||||||||||||||||||||||||||||    
T  2001506 aagttttgtacagtattttaccaaacaacttttaacttaaaaataactt 2001554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 46 - 86
Target Start/End: Original strand, 20259072 - 20259112
Alignment:
Q  46 tttgtataatattttgtcaaacaacttttaacttaaaaata 86  Q
    |||||| ||||||||||||||||| ||||||||||||||||    
T  20259072 tttgtacaatattttgtcaaacaatttttaacttaaaaata 20259112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 42 - 87
Target Start/End: Complemental strand, 36515113 - 36515068
Alignment:
Q  42 aagttttgtataatattttgtcaaacaacttttaacttaaaaataa 87  Q
    |||||||||| | ||||||| ||||||||||||||||| |||||||    
T  36515113 aagttttgtacattattttgccaaacaacttttaactttaaaataa 36515068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 53 - 90
Target Start/End: Original strand, 39782986 - 39783023
Alignment:
Q  53 aatattttgtcaaacaacttttaacttaaaaataactt 90  Q
    ||||||||| |||||||||||||||| |||||||||||    
T  39782986 aatattttgccaaacaacttttaactgaaaaataactt 39783023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 35 - 67
Target Start/End: Original strand, 2463651 - 2463683
Alignment:
Q  35 aaattcaaagttttgtataatattttgtcaaac 67  Q
    ||||||||||||||||| |||||||||||||||    
T  2463651 aaattcaaagttttgtacaatattttgtcaaac 2463683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 39 - 83
Target Start/End: Original strand, 36242337 - 36242381
Alignment:
Q  39 tcaaagttttgtataatattttgtcaaacaacttttaacttaaaa 83  Q
    ||||||||||||| ||||||||  ||||||| |||||||||||||    
T  36242337 tcaaagttttgtacaatattttaccaaacaagttttaacttaaaa 36242381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 61; Significance: 3e-26; HSPs: 58)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 31 - 95
Target Start/End: Original strand, 48961128 - 48961192
Alignment:
Q  31 taataaattcaaagttttgtataatattttgtcaaacaacttttaacttaaaaataacttcagaa 95  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  48961128 taataaattcaaagttttgtataatattttgtcaaacaacttttaacttaaaaataactttagaa 48961192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 31 - 97
Target Start/End: Complemental strand, 12101530 - 12101464
Alignment:
Q  31 taataaattcaaagttttgtataatattttgtcaaacaacttttaacttaaaaataacttcagaact 97  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||    
T  12101530 taataaattcaaagttttgtacaatattttgtcaaacaacttttaacttaaaaataactttagaact 12101464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 31 - 97
Target Start/End: Complemental strand, 35690278 - 35690212
Alignment:
Q  31 taataaattcaaagttttgtataatattttgtcaaacaacttttaacttaaaaataacttcagaact 97  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||    
T  35690278 taataaattcaaagttttgtacaatattttgtcaaacaacttttaacttaaaaataactttagaact 35690212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 31 - 95
Target Start/End: Original strand, 47719493 - 47719557
Alignment:
Q  31 taataaattcaaagttttgtataatattttgtcaaacaacttttaacttaaaaataacttcagaa 95  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||    
T  47719493 taataaattcaaagttttgtataatattttgccaaacaacttttaacttaaaaataactttagaa 47719557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 31 - 97
Target Start/End: Original strand, 7040890 - 7040956
Alignment:
Q  31 taataaattcaaagttttgtataatattttgtcaaacaacttttaacttaaaaataacttcagaact 97  Q
    ||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||| ||||||    
T  7040890 taataaattcaaagttttgtacaatattttgtcaaacagcttttaacttaaaaataactttagaact 7040956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 31 - 97
Target Start/End: Original strand, 39721268 - 39721334
Alignment:
Q  31 taataaattcaaagttttgtataatattttgtcaaacaacttttaacttaaaaataacttcagaact 97  Q
    ||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||| ||||||    
T  39721268 taataaattcaaagttttgtacaatattttgccaaacaacttttaacttaaaaataactttagaact 39721334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 31 - 97
Target Start/End: Complemental strand, 43316582 - 43316516
Alignment:
Q  31 taataaattcaaagttttgtataatattttgtcaaacaacttttaacttaaaaataacttcagaact 97  Q
    ||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||| ||||||    
T  43316582 taataaattcaaagttttgtacaatattttgccaaacaacttttaacttaaaaataactttagaact 43316516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 31 - 97
Target Start/End: Original strand, 50739163 - 50739229
Alignment:
Q  31 taataaattcaaagttttgtataatattttgtcaaacaacttttaacttaaaaataacttcagaact 97  Q
    ||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||| ||||||    
T  50739163 taataaattcaaagttttgtataatattttgccaaacaccttttaacttaaaaataactttagaact 50739229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 31 - 97
Target Start/End: Complemental strand, 50773692 - 50773626
Alignment:
Q  31 taataaattcaaagttttgtataatattttgtcaaacaacttttaacttaaaaataacttcagaact 97  Q
    ||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||| ||||||    
T  50773692 taataaattcaaagttttgtataatattttgccaaacaccttttaacttaaaaataactttagaact 50773626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 31 - 95
Target Start/End: Original strand, 2909441 - 2909505
Alignment:
Q  31 taataaattcaaagttttgtataatattttgtcaaacaacttttaacttaaaaataacttcagaa 95  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||| ||||    
T  2909441 taataaattcaaagttttgtataatattttgtcaaacagcttttaactcaaaaataactttagaa 2909505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 31 - 95
Target Start/End: Complemental strand, 44762789 - 44762725
Alignment:
Q  31 taataaattcaaagttttgtataatattttgtcaaacaacttttaacttaaaaataacttcagaa 95  Q
    ||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||| ||||    
T  44762789 taataaattcaaagttttgtacaatattttgccaaacaacttttaacttaaaaataactttagaa 44762725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 31 - 90
Target Start/End: Complemental strand, 46090184 - 46090125
Alignment:
Q  31 taataaattcaaagttttgtataatattttgtcaaacaacttttaacttaaaaataactt 90  Q
    ||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||    
T  46090184 taataaattcaaagttttgtacaatattttgccaaacaacttttaacttaaaaataactt 46090125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 31 - 90
Target Start/End: Original strand, 54113421 - 54113480
Alignment:
Q  31 taataaattcaaagttttgtataatattttgtcaaacaacttttaacttaaaaataactt 90  Q
    ||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  54113421 taataaatttaaagttttgtacaatattttgtcaaacaacttttaacttaaaaataactt 54113480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 31 - 97
Target Start/End: Complemental strand, 14587453 - 14587387
Alignment:
Q  31 taataaattcaaagttttgtataatattttgtcaaacaacttttaacttaaaaataacttcagaact 97  Q
    ||||||||||||||||||||| ||||||||| |||||||||||||||| ||||||||||| ||||||    
T  14587453 taataaattcaaagttttgtacaatattttgccaaacaacttttaactcaaaaataactttagaact 14587387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 31 - 97
Target Start/End: Complemental strand, 20849470 - 20849404
Alignment:
Q  31 taataaattcaaagttttgtataatattttgtcaaacaacttttaacttaaaaataacttcagaact 97  Q
    ||||||||||||||||||||| ||||||||| |||||| ||||||||||||||||||||| ||||||    
T  20849470 taataaattcaaagttttgtacaatattttgccaaacagcttttaacttaaaaataactttagaact 20849404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 31 - 97
Target Start/End: Original strand, 38361759 - 38361825
Alignment:
Q  31 taataaattcaaagttttgtataatattttgtcaaacaacttttaacttaaaaataacttcagaact 97  Q
    ||||||||||||||||||||| |||||| || |||||||||||||||||||||||||||| ||||||    
T  38361759 taataaattcaaagttttgtacaatattctgccaaacaacttttaacttaaaaataactttagaact 38361825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 35 - 95
Target Start/End: Complemental strand, 36987800 - 36987740
Alignment:
Q  35 aaattcaaagttttgtataatattttgtcaaacaacttttaacttaaaaataacttcagaa 95  Q
    ||||||||||||||||| ||||||||| |||||||||||||||||||||||||||| ||||    
T  36987800 aaattcaaagttttgtacaatattttgccaaacaacttttaacttaaaaataactttagaa 36987740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 35 - 95
Target Start/End: Complemental strand, 37013239 - 37013179
Alignment:
Q  35 aaattcaaagttttgtataatattttgtcaaacaacttttaacttaaaaataacttcagaa 95  Q
    ||||||||||||||||| ||||||||| |||||||||||||||||||||||||||| ||||    
T  37013239 aaattcaaagttttgtacaatattttgccaaacaacttttaacttaaaaataactttagaa 37013179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 31 - 97
Target Start/End: Original strand, 13450281 - 13450347
Alignment:
Q  31 taataaattcaaagttttgtataatattttgtcaaacaacttttaacttaaaaataacttcagaact 97  Q
    ||||||||||||||||||||||||||||||| |||||| ||||||||| |||||||| || ||||||    
T  13450281 taataaattcaaagttttgtataatattttgccaaacagcttttaactcaaaaataattttagaact 13450347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 31 - 97
Target Start/End: Original strand, 29500341 - 29500407
Alignment:
Q  31 taataaattcaaagttttgtataatattttgtcaaacaacttttaacttaaaaataacttcagaact 97  Q
    ||||||||||||||||||||| ||||||||| |||||| ||||||||| ||||||||||| ||||||    
T  29500341 taataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 29500407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 31 - 97
Target Start/End: Complemental strand, 30269150 - 30269084
Alignment:
Q  31 taataaattcaaagttttgtataatattttgtcaaacaacttttaacttaaaaataacttcagaact 97  Q
    ||||||||||||||||||||| ||||||||| |||||| ||||||||| ||||||||||| ||||||    
T  30269150 taataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 30269084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 31 - 97
Target Start/End: Complemental strand, 33932552 - 33932486
Alignment:
Q  31 taataaattcaaagttttgtataatattttgtcaaacaacttttaacttaaaaataacttcagaact 97  Q
    |||||||||||||||||| || |||||||||||||||| ||||||||| ||||||||||| ||||||    
T  33932552 taataaattcaaagttttatacaatattttgtcaaacagcttttaactcaaaaataactttagaact 33932486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 31 - 97
Target Start/End: Complemental strand, 41990830 - 41990764
Alignment:
Q  31 taataaattcaaagttttgtataatattttgtcaaacaacttttaacttaaaaataacttcagaact 97  Q
    ||||||||| ||||||| ||| ||||||||| |||||||||||||||||||||||||||| ||||||    
T  41990830 taataaatttaaagtttggtacaatattttgccaaacaacttttaacttaaaaataactttagaact 41990764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 31 - 97
Target Start/End: Complemental strand, 45599333 - 45599267
Alignment:
Q  31 taataaattcaaagttttgtataatattttgtcaaacaacttttaacttaaaaataacttcagaact 97  Q
    ||||||||||||||||||||| ||||||||| |||||| ||||||||| ||||||||||| ||||||    
T  45599333 taataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 45599267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 31 - 97
Target Start/End: Original strand, 48545118 - 48545184
Alignment:
Q  31 taataaattcaaagttttgtataatattttgtcaaacaacttttaacttaaaaataacttcagaact 97  Q
    |||||||||||||||||||||  ||||||||||||||| ||||||||| ||||||||||| ||||||    
T  48545118 taataaattcaaagttttgtacgatattttgtcaaacagcttttaactcaaaaataactttagaact 48545184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 31 - 97
Target Start/End: Complemental strand, 54195748 - 54195682
Alignment:
Q  31 taataaattcaaagttttgtataatattttgtcaaacaacttttaacttaaaaataacttcagaact 97  Q
    ||||||||||||| ||||||| |||||||||||||| || ||||||||||||||||| |||||||||    
T  54195748 taataaattcaaaattttgtacaatattttgtcaaataatttttaacttaaaaataatttcagaact 54195682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 31 - 97
Target Start/End: Complemental strand, 54510453 - 54510387
Alignment:
Q  31 taataaattcaaagttttgtataatattttgtcaaacaacttttaacttaaaaataacttcagaact 97  Q
    ||||||||||||||||||||| ||||||||| |||||| ||||||||| ||||||||||| ||||||    
T  54510453 taataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 54510387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 33 - 97
Target Start/End: Original strand, 52461038 - 52461102
Alignment:
Q  33 ataaattcaaagttttgtataatattttgtcaaacaacttttaacttaaaaataacttcagaact 97  Q
    ||||||||||||||||||| ||||||||| |||||| ||||||||| ||||||||||| ||||||    
T  52461038 ataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 52461102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 31 - 90
Target Start/End: Original strand, 37413578 - 37413637
Alignment:
Q  31 taataaattcaaagttttgtataatattttgtcaaacaacttttaacttaaaaataactt 90  Q
    ||||||||||||| ||||||| ||||||||| |||||||||| |||||||||||||||||    
T  37413578 taataaattcaaaattttgtacaatattttgccaaacaacttgtaacttaaaaataactt 37413637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 31 - 90
Target Start/End: Complemental strand, 42187815 - 42187756
Alignment:
Q  31 taataaattcaaagttttgtataatattttgtcaaacaacttttaacttaaaaataactt 90  Q
    |||||||||  |||||||||| ||||||||| ||||||||||||||||||||||||||||    
T  42187815 taataaattttaagttttgtacaatattttgccaaacaacttttaacttaaaaataactt 42187756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 31 - 86
Target Start/End: Complemental strand, 46850777 - 46850722
Alignment:
Q  31 taataaattcaaagttttgtataatattttgtcaaacaacttttaacttaaaaata 86  Q
    |||||||||||||| |||||| ||||||||| ||||||||||||||||||||||||    
T  46850777 taataaattcaaaggtttgtacaatattttgccaaacaacttttaacttaaaaata 46850722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 31 - 97
Target Start/End: Original strand, 4018925 - 4018991
Alignment:
Q  31 taataaattcaaagttttgtataatattttgtcaaacaacttttaacttaaaaataacttcagaact 97  Q
    ||||||||||||| ||||||| ||||||||| |||||| ||||||||| ||||||||||| ||||||    
T  4018925 taataaattcaaaattttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 4018991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 31 - 97
Target Start/End: Original strand, 7265064 - 7265130
Alignment:
Q  31 taataaattcaaagttttgtataatattttgtcaaacaacttttaacttaaaaataacttcagaact 97  Q
    ||||||||||||||||||||| |||| ||||||||||  ||||||||| ||||||||||| ||||||    
T  7265064 taataaattcaaagttttgtacaataatttgtcaaactgcttttaactcaaaaataactttagaact 7265130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 31 - 97
Target Start/End: Original strand, 13337108 - 13337173
Alignment:
Q  31 taataaattcaaagttttgtataatattttgtcaaacaacttttaacttaaaaataacttcagaact 97  Q
    |||||||||||||||||||||  |||||||| |||||||| ||||||||||||||||||| ||||||    
T  13337108 taataaattcaaagttttgtacgatattttgccaaacaac-tttaacttaaaaataactttagaact 13337173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 35 - 97
Target Start/End: Complemental strand, 15496532 - 15496470
Alignment:
Q  35 aaattcaaagttttgtataatattttgtcaaacaacttttaacttaaaaataacttcagaact 97  Q
    ||||||||||||||||| ||||||||| |||||||||| || |||||||||||||| ||||||    
T  15496532 aaattcaaagttttgtacaatattttgccaaacaacttatagcttaaaaataactttagaact 15496470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 31 - 97
Target Start/End: Original strand, 19536716 - 19536782
Alignment:
Q  31 taataaattcaaagttttgtataatattttgtcaaacaacttttaacttaaaaataacttcagaact 97  Q
    |||||||||||||||||| || ||||||||| |||||||||||||| | ||||||||||| ||||||    
T  19536716 taataaattcaaagttttatacaatattttgccaaacaacttttaattcaaaaataactttagaact 19536782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 35 - 97
Target Start/End: Complemental strand, 20996396 - 20996334
Alignment:
Q  35 aaattcaaagttttgtataatattttgtcaaacaacttttaacttaaaaataacttcagaact 97  Q
    ||||||||| ||||||| ||||||||| |||||||||||||| ||||||||||||| ||||||    
T  20996396 aaattcaaaattttgtacaatattttgacaaacaacttttaatttaaaaataactttagaact 20996334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 31 - 97
Target Start/End: Original strand, 26881630 - 26881696
Alignment:
Q  31 taataaattcaaagttttgtataatattttgtcaaacaacttttaacttaaaaataacttcagaact 97  Q
    ||||||||||||||||||||| ||||||||| ||||||  |||||||| ||||||||||| ||||||    
T  26881630 taataaattcaaagttttgtaaaatattttgccaaacagtttttaactcaaaaataactttagaact 26881696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 31 - 97
Target Start/End: Complemental strand, 35906750 - 35906684
Alignment:
Q  31 taataaattcaaagttttgtataatattttgtcaaacaacttttaacttaaaaataacttcagaact 97  Q
    |||| |||||||||||||||| ||||||||||||| |||||||||| |||||||||| || ||||||    
T  35906750 taatcaattcaaagttttgtacaatattttgtcaaccaacttttaatttaaaaataattttagaact 35906684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 31 - 97
Target Start/End: Complemental strand, 36592282 - 36592216
Alignment:
Q  31 taataaattcaaagttttgtataatattttgtcaaacaacttttaacttaaaaataacttcagaact 97  Q
    ||||||||||||||||||||| ||||||||| ||||||  |||||||| ||||||||||| ||||||    
T  36592282 taataaattcaaagttttgtacaatattttgacaaacagtttttaactcaaaaataactttagaact 36592216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 31 - 97
Target Start/End: Original strand, 53022675 - 53022741
Alignment:
Q  31 taataaattcaaagttttgtataatattttgtcaaacaacttttaacttaaaaataacttcagaact 97  Q
    ||||||||||||||||||||| ||||||| | |||||| ||||||||| ||||||||||| ||||||    
T  53022675 taataaattcaaagttttgtacaatatttcgccaaacagcttttaactcaaaaataactttagaact 53022741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 31 - 97
Target Start/End: Complemental strand, 54203812 - 54203746
Alignment:
Q  31 taataaattcaaagttttgtataatattttgtcaaacaacttttaacttaaaaataacttcagaact 97  Q
    ||||||||| || |||||||| ||||||||| |||||||||||||| ||||||||||||| ||||||    
T  54203812 taataaatttaatgttttgtacaatattttgccaaacaacttttaatttaaaaataactttagaact 54203746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 37 - 90
Target Start/End: Original strand, 33899842 - 33899895
Alignment:
Q  37 attcaaagttttgtataatattttgtcaaacaacttttaacttaaaaataactt 90  Q
    ||||||||||| ||| ||||||||| ||||||||||||||||||||||||||||    
T  33899842 attcaaagtttcgtaaaatattttgccaaacaacttttaacttaaaaataactt 33899895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 31 - 90
Target Start/End: Complemental strand, 12996877 - 12996819
Alignment:
Q  31 taataaattcaaagttttgtataatattttgtcaaacaacttttaacttaaaaataactt 90  Q
    ||||||||||||||||| ||| ||||||||  ||||||||||||||||||||||||||||    
T  12996877 taataaattcaaagttt-gtacaatatttttccaaacaacttttaacttaaaaataactt 12996819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 31 - 90
Target Start/End: Original strand, 50933213 - 50933272
Alignment:
Q  31 taataaattcaaagttttgtataatattttgtcaaacaacttttaacttaaaaataactt 90  Q
    ||||||||| ||| ||||||| |||||||||| ||||| |||||||||||||||||||||    
T  50933213 taataaatttaaatttttgtacaatattttgttaaacagcttttaacttaaaaataactt 50933272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 35 - 97
Target Start/End: Complemental strand, 46088782 - 46088720
Alignment:
Q  35 aaattcaaagttttgtataatattttgtcaaacaacttttaacttaaaaataacttcagaact 97  Q
    ||||| ||||||||||| ||||||||  |||||||||||| ||||||||||||||| ||||||    
T  46088782 aaattaaaagttttgtacaatatttttccaaacaacttttcacttaaaaataactttagaact 46088720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 31 - 97
Target Start/End: Original strand, 54741812 - 54741878
Alignment:
Q  31 taataaattcaaagttttgtataatattttgtcaaacaacttttaacttaaaaataacttcagaact 97  Q
    ||||||||| ||| ||||||| ||||||||| |||||| ||||||||| ||||||||||| ||||||    
T  54741812 taataaatttaaaattttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 54741878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 41 - 86
Target Start/End: Original strand, 10617639 - 10617684
Alignment:
Q  41 aaagttttgtataatattttgtcaaacaacttttaacttaaaaata 86  Q
    ||||||||||| ||||||||| ||||||||||||||||||||||||    
T  10617639 aaagttttgtacaatattttgccaaacaacttttaacttaaaaata 10617684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 31 - 95
Target Start/End: Original strand, 29450668 - 29450732
Alignment:
Q  31 taataaattcaaagttttgtataatattttgtcaaacaacttttaacttaaaaataacttcagaa 95  Q
    ||||||||||||||||||||| |||||||||  ||||| ||||||||  ||||||||||| ||||    
T  29450668 taataaattcaaagttttgtacaatattttgctaaacagcttttaacccaaaaataactttagaa 29450732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 31 - 97
Target Start/End: Complemental strand, 22347146 - 22347079
Alignment:
Q  31 taataaattcaaagttttgtataata-ttttgtcaaacaacttttaacttaaaaataacttcagaact 97  Q
    ||||||||||||||||||||| |||| |||||  ||||| ||||||||| ||||||||||| ||||||    
T  22347146 taataaattcaaagttttgtacaatatttttgctaaacagcttttaactcaaaaataactttagaact 22347079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 31 - 90
Target Start/End: Original strand, 52674792 - 52674850
Alignment:
Q  31 taataaattcaaagttttgtataatattttgtcaaacaacttttaacttaaaaataactt 90  Q
    ||||||||||||||||||||| ||||||||| ||||| | |||||||| |||||||||||    
T  52674792 taataaattcaaagttttgtacaatattttgccaaac-agttttaactcaaaaataactt 52674850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 39 - 86
Target Start/End: Original strand, 54835743 - 54835790
Alignment:
Q  39 tcaaagttttgtataatattttgtcaaacaacttttaacttaaaaata 86  Q
    ||||| ||||||| ||||||||| ||||||||||||||||||||||||    
T  54835743 tcaaaattttgtacaatattttgccaaacaacttttaacttaaaaata 54835790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 31 - 97
Target Start/End: Original strand, 46757568 - 46757633
Alignment:
Q  31 taataaattcaaagttttgtataatattttgtcaaacaacttttaacttaaaaataacttcagaact 97  Q
    |||||||||||||||||  || ||||||||| |||||| ||||||||| ||||||||||| ||||||    
T  46757568 taataaattcaaagttta-tacaatattttgccaaacagcttttaactcaaaaataactttagaact 46757633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 46 - 90
Target Start/End: Original strand, 8238921 - 8238965
Alignment:
Q  46 tttgtataatattttgtcaaacaacttttaacttaaaaataactt 90  Q
    |||||| ||||||||| |||||||| |||||||||||||||||||    
T  8238921 tttgtacaatattttgccaaacaacatttaacttaaaaataactt 8238965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 58 - 95
Target Start/End: Complemental strand, 34433579 - 34433542
Alignment:
Q  58 tttgtcaaacaacttttaacttaaaaataacttcagaa 95  Q
    ||||||||| ||||||||||||||||||||||| ||||    
T  34433579 tttgtcaaataacttttaacttaaaaataactttagaa 34433542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 32 - 68
Target Start/End: Original strand, 875840 - 875876
Alignment:
Q  32 aataaattcaaagttttgtataatattttgtcaaaca 68  Q
    |||||||||||||||||||| ||||||||| ||||||    
T  875840 aataaattcaaagttttgtacaatattttgccaaaca 875876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 35 - 83
Target Start/End: Original strand, 32754161 - 32754208
Alignment:
Q  35 aaattcaaagttttgtataatattttgtcaaacaacttttaacttaaaa 83  Q
    ||||||||||||| ||| |||||||||||||||||  ||||||||||||    
T  32754161 aaattcaaagttt-gtacaatattttgtcaaacaatatttaacttaaaa 32754208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 63 - 95
Target Start/End: Complemental strand, 35529890 - 35529858
Alignment:
Q  63 caaacaacttttaacttaaaaataacttcagaa 95  Q
    |||||||||||||||||||||||||||| ||||    
T  35529890 caaacaacttttaacttaaaaataactttagaa 35529858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0244 (Bit Score: 59; Significance: 4e-25; HSPs: 1)
Name: scaffold0244
Description:

Target: scaffold0244; HSP #1
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 31 - 97
Target Start/End: Complemental strand, 7640 - 7574
Alignment:
Q  31 taataaattcaaagttttgtataatattttgtcaaacaacttttaacttaaaaataacttcagaact 97  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||    
T  7640 taataaattcaaagttttgtacaatattttgtcaaacaacttttaacttaaaaataactttagaact 7574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 59; Significance: 4e-25; HSPs: 60)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 31 - 97
Target Start/End: Original strand, 22556971 - 22557037
Alignment:
Q  31 taataaattcaaagttttgtataatattttgtcaaacaacttttaacttaaaaataacttcagaact 97  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||    
T  22556971 taataaattcaaagttttgtaaaatattttgtcaaacaacttttaacttaaaaataactttagaact 22557037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 31 - 97
Target Start/End: Complemental strand, 41144371 - 41144305
Alignment:
Q  31 taataaattcaaagttttgtataatattttgtcaaacaacttttaacttaaaaataacttcagaact 97  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||    
T  41144371 taataaattcaaagttttgtataatattttgccaaacaacttttaacttaaaaataactttagaact 41144305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 190 - 251
Target Start/End: Complemental strand, 45472356 - 45472295
Alignment:
Q  190 gtctgaccaaacggtatctaaatatttgttatttgtggcactggcacatgttagcatatatt 251  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  45472356 gtctggccaaacggtatctaaatatttgttatttgtggcactggcacatgttagcatatatt 45472295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 31 - 97
Target Start/End: Original strand, 8847945 - 8848011
Alignment:
Q  31 taataaattcaaagttttgtataatattttgtcaaacaacttttaacttaaaaataacttcagaact 97  Q
    ||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||| ||||||    
T  8847945 taataaattcaaagttttgtacaatattttgccaaacaacttttaacttaaaaataactttagaact 8848011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 31 - 97
Target Start/End: Original strand, 17624667 - 17624733
Alignment:
Q  31 taataaattcaaagttttgtataatattttgtcaaacaacttttaacttaaaaataacttcagaact 97  Q
    ||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||| ||||||    
T  17624667 taataaattcaaagttttgtataatattttgccaaacagcttttaacttaaaaataactttagaact 17624733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 31 - 97
Target Start/End: Original strand, 23628842 - 23628908
Alignment:
Q  31 taataaattcaaagttttgtataatattttgtcaaacaacttttaacttaaaaataacttcagaact 97  Q
    ||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||| ||||||    
T  23628842 taataaattcaaagttttgtacaatattttgccaaacaacttttaacttaaaaataactttagaact 23628908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 31 - 97
Target Start/End: Complemental strand, 36190125 - 36190059
Alignment:
Q  31 taataaattcaaagttttgtataatattttgtcaaacaacttttaacttaaaaataacttcagaact 97  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||| ||||||    
T  36190125 taataaattcaaagttttgtacaatattttgtcaaacaacttttaactcaaaaataactttagaact 36190059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 31 - 97
Target Start/End: Original strand, 7365803 - 7365869
Alignment:
Q  31 taataaattcaaagttttgtataatattttgtcaaacaacttttaacttaaaaataacttcagaact 97  Q
    ||||||||||||||||||||| ||||||||| |||||| ||||||||||||||||||||| ||||||    
T  7365803 taataaattcaaagttttgtacaatattttgccaaacagcttttaacttaaaaataactttagaact 7365869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 31 - 97
Target Start/End: Original strand, 11180915 - 11180981
Alignment:
Q  31 taataaattcaaagttttgtataatattttgtcaaacaacttttaacttaaaaataacttcagaact 97  Q
    |||||||||||| |||||||| ||||||||| |||||||||||||||||||||||||||| ||||||    
T  11180915 taataaattcaatgttttgtacaatattttgccaaacaacttttaacttaaaaataactttagaact 11180981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 31 - 97
Target Start/End: Complemental strand, 24303869 - 24303803
Alignment:
Q  31 taataaattcaaagttttgtataatattttgtcaaacaacttttaacttaaaaataacttcagaact 97  Q
    ||||||||||||||||||||| ||||||||| |||| ||||||||||||||||||||||| ||||||    
T  24303869 taataaattcaaagttttgtacaatattttgccaaataacttttaacttaaaaataactttagaact 24303803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 31 - 97
Target Start/End: Original strand, 26111385 - 26111451
Alignment:
Q  31 taataaattcaaagttttgtataatattttgtcaaacaacttttaacttaaaaataacttcagaact 97  Q
    ||||||||||||||||||||| |||||||||||||||| ||||||||| ||||||||||| ||||||    
T  26111385 taataaattcaaagttttgtacaatattttgtcaaacagcttttaactcaaaaataactttagaact 26111451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 31 - 97
Target Start/End: Complemental strand, 34264698 - 34264632
Alignment:
Q  31 taataaattcaaagttttgtataatattttgtcaaacaacttttaacttaaaaataacttcagaact 97  Q
    ||||||||||||||||||||| ||||||||| |||||||||||||||| ||||||||||| ||||||    
T  34264698 taataaattcaaagttttgtacaatattttgccaaacaacttttaactcaaaaataactttagaact 34264632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 31 - 97
Target Start/End: Original strand, 43117525 - 43117591
Alignment:
Q  31 taataaattcaaagttttgtataatattttgtcaaacaacttttaacttaaaaataacttcagaact 97  Q
    ||||||||||||||||||||| ||||||||| |||||||||||||||||||||| ||||| ||||||    
T  43117525 taataaattcaaagttttgtacaatattttgccaaacaacttttaacttaaaaacaactttagaact 43117591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 35 - 97
Target Start/End: Complemental strand, 46045857 - 46045795
Alignment:
Q  35 aaattcaaagttttgtataatattttgtcaaacaacttttaacttaaaaataacttcagaact 97  Q
    ||||||||||||||||| ||||||||| |||||||||||||||||||||||||||| ||||||    
T  46045857 aaattcaaagttttgtacaatattttgccaaacaacttttaacttaaaaataactttagaact 46045795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 31 - 90
Target Start/End: Complemental strand, 26097717 - 26097658
Alignment:
Q  31 taataaattcaaagttttgtataatattttgtcaaacaacttttaacttaaaaataactt 90  Q
    ||||||||||||||||||||| ||||||||| ||||||||||||||||| ||||||||||    
T  26097717 taataaattcaaagttttgtacaatattttgccaaacaacttttaacttcaaaataactt 26097658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 31 - 90
Target Start/End: Original strand, 40849735 - 40849794
Alignment:
Q  31 taataaattcaaagttttgtataatattttgtcaaacaacttttaacttaaaaataactt 90  Q
    ||||||||||||||||||||| ||||||||| ||||||| ||||||||||||||||||||    
T  40849735 taataaattcaaagttttgtacaatattttgacaaacaatttttaacttaaaaataactt 40849794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 31 - 97
Target Start/End: Original strand, 1166646 - 1166712
Alignment:
Q  31 taataaattcaaagttttgtataatattttgtcaaacaacttttaacttaaaaataacttcagaact 97  Q
    ||||||||||||||||||||| ||||||||| |||||| ||||||||| ||||||||||| ||||||    
T  1166646 taataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 1166712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 31 - 97
Target Start/End: Original strand, 1169128 - 1169194
Alignment:
Q  31 taataaattcaaagttttgtataatattttgtcaaacaacttttaacttaaaaataacttcagaact 97  Q
    ||||||||||||||||||||| ||||||||| |||||| ||||||||| ||||||||||| ||||||    
T  1169128 taataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 1169194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 31 - 97
Target Start/End: Complemental strand, 6940244 - 6940178
Alignment:
Q  31 taataaattcaaagttttgtataatattttgtcaaacaacttttaacttaaaaataacttcagaact 97  Q
    ||||||||||||||||||||| ||||||||| |||||| ||||||||| ||||||||||| ||||||    
T  6940244 taataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 6940178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 31 - 97
Target Start/End: Complemental strand, 7400275 - 7400209
Alignment:
Q  31 taataaattcaaagttttgtataatattttgtcaaacaacttttaacttaaaaataacttcagaact 97  Q
    ||||||||||||||||||||| ||||||||| |||||| ||||||||| ||||||||||| ||||||    
T  7400275 taataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 7400209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 31 - 97
Target Start/End: Complemental strand, 10137949 - 10137883
Alignment:
Q  31 taataaattcaaagttttgtataatattttgtcaaacaacttttaacttaaaaataacttcagaact 97  Q
    ||||||||||||||||||||| ||||||||| |||||| ||||||||| ||||||||||| ||||||    
T  10137949 taataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 10137883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 31 - 97
Target Start/End: Original strand, 11200840 - 11200906
Alignment:
Q  31 taataaattcaaagttttgtataatattttgtcaaacaacttttaacttaaaaataacttcagaact 97  Q
    ||||||||||||| ||||||| ||||||||| |||||| ||||||||||||||||||||| ||||||    
T  11200840 taataaattcaaaattttgtacaatattttgccaaacagcttttaacttaaaaataactttagaact 11200906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 31 - 97
Target Start/End: Complemental strand, 13891062 - 13890996
Alignment:
Q  31 taataaattcaaagttttgtataatattttgtcaaacaacttttaacttaaaaataacttcagaact 97  Q
    ||||||||||||||||||||| ||||||||| |||||| ||||||||| ||||||||||| ||||||    
T  13891062 taataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 13890996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 31 - 97
Target Start/End: Original strand, 17976454 - 17976520
Alignment:
Q  31 taataaattcaaagttttgtataatattttgtcaaacaacttttaacttaaaaataacttcagaact 97  Q
    ||||||||||||||||||||  ||||||||| ||||||||||||||||||||||||| || ||||||    
T  17976454 taataaattcaaagttttgtgcaatattttgccaaacaacttttaacttaaaaataaatttagaact 17976520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 31 - 97
Target Start/End: Original strand, 18138342 - 18138408
Alignment:
Q  31 taataaattcaaagttttgtataatattttgtcaaacaacttttaacttaaaaataacttcagaact 97  Q
    ||||||||||||||||||||| |||||| || |||| ||||||||||||||||||||||| ||||||    
T  18138342 taataaattcaaagttttgtacaatattatgccaaagaacttttaacttaaaaataactttagaact 18138408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 31 - 97
Target Start/End: Complemental strand, 28116909 - 28116843
Alignment:
Q  31 taataaattcaaagttttgtataatattttgtcaaacaacttttaacttaaaaataacttcagaact 97  Q
    ||||||||||||||||||||| ||||||||| |||||| ||||||||| ||||||||||| ||||||    
T  28116909 taataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 28116843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 31 - 97
Target Start/End: Complemental strand, 32206662 - 32206596
Alignment:
Q  31 taataaattcaaagttttgtataatattttgtcaaacaacttttaacttaaaaataacttcagaact 97  Q
    ||||||||||||||||||||| ||||||||| |||||| ||||||||| ||||||||||| ||||||    
T  32206662 taataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 32206596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 31 - 97
Target Start/End: Original strand, 40665528 - 40665593
Alignment:
Q  31 taataaattcaaagttttgtataatattttgtcaaacaacttttaacttaaaaataacttcagaact 97  Q
    ||||||||||||||||||||| |||||||||||||||| | ||||||||||||||||||| ||||||    
T  40665528 taataaattcaaagttttgtacaatattttgtcaaacagc-tttaacttaaaaataactttagaact 40665593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 31 - 97
Target Start/End: Original strand, 40950952 - 40951018
Alignment:
Q  31 taataaattcaaagttttgtataatattttgtcaaacaacttttaacttaaaaataacttcagaact 97  Q
    ||||||||||||||||||||| ||||||||| |||||| ||||||||| ||||||||||| ||||||    
T  40950952 taataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 40951018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 31 - 97
Target Start/End: Original strand, 49125552 - 49125618
Alignment:
Q  31 taataaattcaaagttttgtataatattttgtcaaacaacttttaacttaaaaataacttcagaact 97  Q
    ||||||||||||||||||||| |||||| || |||| ||||||||||||||||||||||| ||||||    
T  49125552 taataaattcaaagttttgtacaatattatgccaaagaacttttaacttaaaaataactttagaact 49125618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 31 - 97
Target Start/End: Original strand, 53274635 - 53274701
Alignment:
Q  31 taataaattcaaagttttgtataatattttgtcaaacaacttttaacttaaaaataacttcagaact 97  Q
    ||||||||||||||||||||| ||||||||| |||||| ||||||||| ||||||||||| ||||||    
T  53274635 taataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 53274701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 31 - 97
Target Start/End: Original strand, 55188177 - 55188243
Alignment:
Q  31 taataaattcaaagttttgtataatattttgtcaaacaacttttaacttaaaaataacttcagaact 97  Q
    ||||||||||||||||||||| ||||||||| |||||| ||||||||| ||||||||||| ||||||    
T  55188177 taataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 55188243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 31 - 97
Target Start/End: Original strand, 55991826 - 55991892
Alignment:
Q  31 taataaattcaaagttttgtataatattttgtcaaacaacttttaacttaaaaataacttcagaact 97  Q
    ||||||||||||||||||||| |||||||||||||||| ||||||||| |||||||| || ||||||    
T  55991826 taataaattcaaagttttgtacaatattttgtcaaacagcttttaactcaaaaataattttagaact 55991892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 35 - 87
Target Start/End: Original strand, 32139419 - 32139471
Alignment:
Q  35 aaattcaaagttttgtataatattttgtcaaacaacttttaacttaaaaataa 87  Q
    ||||||||||||||||| ||||||||| |||||||||||||||||||||||||    
T  32139419 aaattcaaagttttgtacaatattttgccaaacaacttttaacttaaaaataa 32139471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 45 - 97
Target Start/End: Original strand, 40952041 - 40952093
Alignment:
Q  45 ttttgtataatattttgtcaaacaacttttaacttaaaaataacttcagaact 97  Q
    ||||||| |||||||||||||||||||||||||||||||||||||| ||||||    
T  40952041 ttttgtacaatattttgtcaaacaacttttaacttaaaaataactttagaact 40952093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 39 - 95
Target Start/End: Original strand, 51153499 - 51153555
Alignment:
Q  39 tcaaagttttgtataatattttgtcaaacaacttttaacttaaaaataacttcagaa 95  Q
    ||||||||||||| ||||||||| |||||||||||||||||||||||||||| ||||    
T  51153499 tcaaagttttgtacaatattttgccaaacaacttttaacttaaaaataactttagaa 51153555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 31 - 90
Target Start/End: Complemental strand, 32200782 - 32200723
Alignment:
Q  31 taataaattcaaagttttgtataatattttgtcaaacaacttttaacttaaaaataactt 90  Q
    ||||||||||||||||||||| |||||| || |||||||||||||| |||||||||||||    
T  32200782 taataaattcaaagttttgtacaatattctgccaaacaacttttaatttaaaaataactt 32200723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 35 - 90
Target Start/End: Original strand, 39651746 - 39651801
Alignment:
Q  35 aaattcaaagttttgtataatattttgtcaaacaacttttaacttaaaaataactt 90  Q
    ||||||||||||||||| || |||||| ||||||||||||||||||||||||||||    
T  39651746 aaattcaaagttttgtacaacattttgccaaacaacttttaacttaaaaataactt 39651801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 34 - 97
Target Start/End: Original strand, 51187627 - 51187690
Alignment:
Q  34 taaattcaaagttttgtataatattttgtcaaacaacttttaacttaaaaataacttcagaact 97  Q
    |||||||||| ||||||| | |||| || |||||||||||||||||||||||||||||||||||    
T  51187627 taaattcaaaattttgtacattattctgccaaacaacttttaacttaaaaataacttcagaact 51187690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 35 - 97
Target Start/End: Original strand, 8151213 - 8151274
Alignment:
Q  35 aaattcaaagttttgtataatattttgtcaaacaacttttaacttaaaaataacttcagaact 97  Q
    ||||||||||||||||| || |||||||||||||||||||||||||||||||| || ||||||    
T  8151213 aaattcaaagttttgtacaa-attttgtcaaacaacttttaacttaaaaataattttagaact 8151274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 31 - 97
Target Start/End: Complemental strand, 11967070 - 11967004
Alignment:
Q  31 taataaattcaaagttttgtataatattttgtcaaacaacttttaacttaaaaataacttcagaact 97  Q
    ||||||||||||||||||||| ||||||||| |||||| ||||||||| |||||||| || ||||||    
T  11967070 taataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataattttagaact 11967004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 31 - 97
Target Start/End: Complemental strand, 27288540 - 27288474
Alignment:
Q  31 taataaattcaaagttttgtataatattttgtcaaacaacttttaacttaaaaataacttcagaact 97  Q
    ||||||||||||| ||||||| ||||||||| |||||| ||||||||| ||||||||||| ||||||    
T  27288540 taataaattcaaaattttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 27288474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 39 - 97
Target Start/End: Complemental strand, 28361551 - 28361493
Alignment:
Q  39 tcaaagttttgtataatattttgtcaaacaacttttaacttaaaaataacttcagaact 97  Q
    ||||||||||||| ||||||||| ||||||||||||||||||||||||| |||| ||||    
T  28361551 tcaaagttttgtacaatattttgccaaacaacttttaacttaaaaataaattcataact 28361493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 31 - 97
Target Start/End: Complemental strand, 37873712 - 37873646
Alignment:
Q  31 taataaattcaaagttttgtataatattttgtcaaacaacttttaacttaaaaataacttcagaact 97  Q
    ||||||||||||  ||||||| ||||||||| |||||||||||||| ||||||||||||| ||||||    
T  37873712 taataaattcaactttttgtacaatattttgccaaacaacttttaatttaaaaataactttagaact 37873646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 31 - 89
Target Start/End: Complemental strand, 55208554 - 55208496
Alignment:
Q  31 taataaattcaaagttttgtataatattttgtcaaacaacttttaacttaaaaataact 89  Q
    ||||||||||||||||||||| ||||||||| |||||| ||||||||| ||||||||||    
T  55208554 taataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataact 55208496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 31 - 90
Target Start/End: Complemental strand, 8654380 - 8654322
Alignment:
Q  31 taataaattcaaagttttgtataatattttgtcaaacaacttttaacttaaaaataactt 90  Q
    ||||||||||||||||||||| ||||||| | ||||||| ||||||||||||||||||||    
T  8654380 taataaattcaaagttttgtacaatattt-gccaaacaatttttaacttaaaaataactt 8654322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 31 - 90
Target Start/End: Original strand, 20681202 - 20681261
Alignment:
Q  31 taataaattcaaagttttgtataatattttgtcaaacaacttttaacttaaaaataactt 90  Q
    |||||||||||| |||| ||| ||||||||  ||||||||||||||||||||||||||||    
T  20681202 taataaattcaatgtttcgtacaatattttaccaaacaacttttaacttaaaaataactt 20681261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 31 - 90
Target Start/End: Complemental strand, 29099691 - 29099632
Alignment:
Q  31 taataaattcaaagttttgtataatattttgtcaaacaacttttaacttaaaaataactt 90  Q
    ||||||||| |||||||| || ||||||||| |||||||||||||||| |||||||||||    
T  29099691 taataaatttaaagttttatacaatattttgccaaacaacttttaactgaaaaataactt 29099632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 31 - 97
Target Start/End: Complemental strand, 346673 - 346607
Alignment:
Q  31 taataaattcaaagttttgtataatattttgtcaaacaacttttaacttaaaaataacttcagaact 97  Q
    |||||||||||| |||||||| |||| |||| |||| |||||||||||||| |||||||| ||||||    
T  346673 taataaattcaatgttttgtacaatagtttgccaaagaacttttaacttaacaataactttagaact 346607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 37 - 87
Target Start/End: Original strand, 25881932 - 25881982
Alignment:
Q  37 attcaaagttttgtataatattttgtcaaacaacttttaacttaaaaataa 87  Q
    ||||||||||||||| |||||||||  ||||||||||||||||||||||||    
T  25881932 attcaaagttttgtacaatattttgctaaacaacttttaacttaaaaataa 25881982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 36 - 86
Target Start/End: Complemental strand, 29346287 - 29346238
Alignment:
Q  36 aattcaaagttttgtataatattttgtcaaacaacttttaacttaaaaata 86  Q
    |||||||||||| ||| ||||||||||||||||||||||||||||||||||    
T  29346287 aattcaaagttt-gtacaatattttgtcaaacaacttttaacttaaaaata 29346238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 36 - 86
Target Start/End: Complemental strand, 35832051 - 35832002
Alignment:
Q  36 aattcaaagttttgtataatattttgtcaaacaacttttaacttaaaaata 86  Q
    |||||||||||| ||| ||||||||||||||||||||||||||||||||||    
T  35832051 aattcaaagttt-gtacaatattttgtcaaacaacttttaacttaaaaata 35832002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 31 - 90
Target Start/End: Original strand, 30071348 - 30071407
Alignment:
Q  31 taataaattcaaagttttgtataatattttgtcaaacaacttttaacttaaaaataactt 90  Q
    ||||||||| |||||||||||  |||||||| ||||||||||| || |||||||||||||    
T  30071348 taataaatttaaagttttgtacgatattttgccaaacaactttaaagttaaaaataactt 30071407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 31 - 82
Target Start/End: Original strand, 19587920 - 19587969
Alignment:
Q  31 taataaattcaaagttttgtataatattttgtcaaacaacttttaacttaaa 82  Q
    ||||||||||||||||| ||||||||||| |||||||||| |||||||||||    
T  19587920 taataaattcaaagttt-gtataatattt-gtcaaacaacatttaacttaaa 19587969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 31 - 86
Target Start/End: Complemental strand, 24631167 - 24631113
Alignment:
Q  31 taataaattcaaagttttgtataatattttgtcaaacaacttttaacttaaaaata 86  Q
    ||||||||||||||| || || ||||||||  ||||||||||||||||||||||||    
T  24631167 taataaattcaaagtatt-tacaatatttttccaaacaacttttaacttaaaaata 24631113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 31 - 82
Target Start/End: Complemental strand, 26927004 - 26926954
Alignment:
Q  31 taataaattcaaagttttgtataatattttgtcaaacaacttttaacttaaa 82  Q
    ||||||||||||||||| ||| |||||||||||||||||| || ||||||||    
T  26927004 taataaattcaaagttt-gtacaatattttgtcaaacaacattaaacttaaa 26926954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 31 - 73
Target Start/End: Complemental strand, 45472503 - 45472461
Alignment:
Q  31 taataaattcaaagttttgtataatattttgtcaaacaacttt 73  Q
    ||||||||||||||||||||| ||||||||| |||| ||||||    
T  45472503 taataaattcaaagttttgtacaatattttgccaaataacttt 45472461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 42 - 83
Target Start/End: Original strand, 41105971 - 41106012
Alignment:
Q  42 aagttttgtataatattttgtcaaacaacttttaacttaaaa 83  Q
    ||||||| || ||||||||| |||||||||||||||||||||    
T  41105971 aagttttatacaatattttgccaaacaacttttaacttaaaa 41106012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 46 - 83
Target Start/End: Complemental strand, 41986333 - 41986296
Alignment:
Q  46 tttgtataatattttgtcaaacaacttttaacttaaaa 83  Q
    |||||| |||||||||||||||||| ||||||||||||    
T  41986333 tttgtacaatattttgtcaaacaacgtttaacttaaaa 41986296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 46 - 86
Target Start/End: Complemental strand, 9097521 - 9097481
Alignment:
Q  46 tttgtataatattttgtcaaacaacttttaacttaaaaata 86  Q
    |||||| ||||||||| |||||||| |||||||||||||||    
T  9097521 tttgtacaatattttgccaaacaacatttaacttaaaaata 9097481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 57; Significance: 7e-24; HSPs: 27)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 33 - 97
Target Start/End: Original strand, 17505496 - 17505560
Alignment:
Q  33 ataaattcaaagttttgtataatattttgtcaaacaacttttaacttaaaaataacttcagaact 97  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||    
T  17505496 ataaattcaaagttttgtataatattttatcaaacaacttttaacttaaaaataactttagaact 17505560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 31 - 97
Target Start/End: Complemental strand, 173128 - 173062
Alignment:
Q  31 taataaattcaaagttttgtataatattttgtcaaacaacttttaacttaaaaataacttcagaact 97  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||| || ||||||    
T  173128 taataaatacaaagttttgtataatattttgtcaaacaacttttaacttaaaaataattttagaact 173062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 31 - 97
Target Start/End: Original strand, 28472229 - 28472295
Alignment:
Q  31 taataaattcaaagttttgtataatattttgtcaaacaacttttaacttaaaaataacttcagaact 97  Q
    ||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||| ||||||    
T  28472229 taataaattcaaagttttgtacaatattttgccaaacaacttttaacttaaaaataactttagaact 28472295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 31 - 97
Target Start/End: Complemental strand, 34247821 - 34247755
Alignment:
Q  31 taataaattcaaagttttgtataatattttgtcaaacaacttttaacttaaaaataacttcagaact 97  Q
    ||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||| ||||||    
T  34247821 taataaattcaaagttttgtacaatattttttcaaacaacttttaacttaaaaataactttagaact 34247755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 31 - 95
Target Start/End: Original strand, 10945717 - 10945781
Alignment:
Q  31 taataaattcaaagttttgtataatattttgtcaaacaacttttaacttaaaaataacttcagaa 95  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||| ||||    
T  10945717 taataaattcaaagttttgtataatattttgccaaacaacttttaacttagaaataactttagaa 10945781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 31 - 97
Target Start/End: Complemental strand, 5414628 - 5414562
Alignment:
Q  31 taataaattcaaagttttgtataatattttgtcaaacaacttttaacttaaaaataacttcagaact 97  Q
    ||||||||| ||||||||||| ||||||||| |||||||||||||||||||||||||||| ||||||    
T  5414628 taataaattaaaagttttgtacaatattttgccaaacaacttttaacttaaaaataactttagaact 5414562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 31 - 97
Target Start/End: Original strand, 24162800 - 24162866
Alignment:
Q  31 taataaattcaaagttttgtataatattttgtcaaacaacttttaacttaaaaataacttcagaact 97  Q
    ||||||||||||| ||||||||||||||||| |||||||||||| ||||||||||||||| ||||||    
T  24162800 taataaattcaaaattttgtataatattttgccaaacaactttttacttaaaaataactttagaact 24162866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 31 - 87
Target Start/End: Original strand, 6833559 - 6833615
Alignment:
Q  31 taataaattcaaagttttgtataatattttgtcaaacaacttttaacttaaaaataa 87  Q
    ||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||    
T  6833559 taataaattcaaagttttgtacaatattttgccaaacaacttttaacttaaaaataa 6833615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 31 - 87
Target Start/End: Original strand, 29859417 - 29859473
Alignment:
Q  31 taataaattcaaagttttgtataatattttgtcaaacaacttttaacttaaaaataa 87  Q
    |||||||||||||||||| || |||||||||||||||||||||||||||||||||||    
T  29859417 taataaattcaaagttttatacaatattttgtcaaacaacttttaacttaaaaataa 29859473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 31 - 90
Target Start/End: Complemental strand, 6018640 - 6018581
Alignment:
Q  31 taataaattcaaagttttgtataatattttgtcaaacaacttttaacttaaaaataactt 90  Q
    ||||||||| ||||||||||| ||||||||| ||||||||||||||||||||||||||||    
T  6018640 taataaatttaaagttttgtacaatattttgccaaacaacttttaacttaaaaataactt 6018581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 31 - 97
Target Start/End: Original strand, 559735 - 559801
Alignment:
Q  31 taataaattcaaagttttgtataatattttgtcaaacaacttttaacttaaaaataacttcagaact 97  Q
    ||||||||||||||||||||| ||||||||| |||||| ||||||||| ||||||||||| ||||||    
T  559735 taataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 559801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 31 - 97
Target Start/End: Original strand, 3850233 - 3850299
Alignment:
Q  31 taataaattcaaagttttgtataatattttgtcaaacaacttttaacttaaaaataacttcagaact 97  Q
    ||||||||||||||||||||| ||||||||| |||||| ||||||||| ||||||||||| ||||||    
T  3850233 taataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 3850299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 31 - 97
Target Start/End: Complemental strand, 18593676 - 18593610
Alignment:
Q  31 taataaattcaaagttttgtataatattttgtcaaacaacttttaacttaaaaataacttcagaact 97  Q
    ||||||||||||||||||||| ||||||||| |||||| ||||||||| ||||||||||| ||||||    
T  18593676 taataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 18593610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 31 - 97
Target Start/End: Original strand, 20791554 - 20791620
Alignment:
Q  31 taataaattcaaagttttgtataatattttgtcaaacaacttttaacttaaaaataacttcagaact 97  Q
    ||||||||||||||||||||| ||||||||| |||||| ||||||||| ||||||||||| ||||||    
T  20791554 taataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 20791620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 31 - 97
Target Start/End: Complemental strand, 24046626 - 24046560
Alignment:
Q  31 taataaattcaaagttttgtataatattttgtcaaacaacttttaacttaaaaataacttcagaact 97  Q
    ||||||||||||||||||||| ||||||||| |||||| ||||||||| ||||||||||| ||||||    
T  24046626 taataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 24046560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 35 - 97
Target Start/End: Original strand, 29043219 - 29043281
Alignment:
Q  35 aaattcaaagttttgtataatattttgtcaaacaacttttaacttaaaaataacttcagaact 97  Q
    |||||||||||| |||| ||||||||| |||||||||||||||||||||||||||| ||||||    
T  29043219 aaattcaaagttatgtacaatattttgccaaacaacttttaacttaaaaataactttagaact 29043281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 31 - 89
Target Start/End: Original strand, 32244385 - 32244443
Alignment:
Q  31 taataaattcaaagttttgtataatattttgtcaaacaacttttaacttaaaaataact 89  Q
    ||||||||||||||||||||| ||||||||| |||||||||||||||| ||||||||||    
T  32244385 taataaattcaaagttttgtacaatattttgccaaacaacttttaactcaaaaataact 32244443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 31 - 97
Target Start/End: Complemental strand, 34207069 - 34207003
Alignment:
Q  31 taataaattcaaagttttgtataatattttgtcaaacaacttttaacttaaaaataacttcagaact 97  Q
    ||||||||||||| ||||||| ||||||||  |||||||||||||||||||||||||||| ||||||    
T  34207069 taataaattcaaaattttgtacaatatttttccaaacaacttttaacttaaaaataactttagaact 34207003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 31 - 96
Target Start/End: Complemental strand, 33945889 - 33945824
Alignment:
Q  31 taataaattcaaagttttgtataatattttgtcaaacaacttttaacttaaaaataacttcagaac 96  Q
    ||||||||||||||||||||| ||||||||| |||||| ||||||||| ||||||||||| |||||    
T  33945889 taataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaac 33945824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 31 - 97
Target Start/End: Original strand, 7541113 - 7541179
Alignment:
Q  31 taataaattcaaagttttgtataatattttgtcaaacaacttttaacttaaaaataacttcagaact 97  Q
    ||||||||| || |||||||| || |||||| |||||||||||||||||||||||||||| ||||||    
T  7541113 taataaattgaatgttttgtacaacattttgccaaacaacttttaacttaaaaataactttagaact 7541179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 41 - 97
Target Start/End: Original strand, 19988908 - 19988964
Alignment:
Q  41 aaagttttgtataatattttgtcaaacaacttttaacttaaaaataacttcagaact 97  Q
    ||||||||||| ||||||||| || ||||||||||||||||||||||||| ||||||    
T  19988908 aaagttttgtacaatattttgccacacaacttttaacttaaaaataactttagaact 19988964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 31 - 82
Target Start/End: Original strand, 33976010 - 33976060
Alignment:
Q  31 taataaattcaaagttttgtataatattttgtcaaacaacttttaacttaaa 82  Q
    ||||||||||||||||| |||||||||||||||||||||| |||||||||||    
T  33976010 taataaattcaaagttt-gtataatattttgtcaaacaacatttaacttaaa 33976060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 31 - 86
Target Start/End: Original strand, 8866971 - 8867026
Alignment:
Q  31 taataaattcaaagttttgtataatattttgtcaaacaacttttaacttaaaaata 86  Q
    |||||||||||||| ||  || ||||||||| ||||||||||||||||||||||||    
T  8866971 taataaattcaaagcttcatacaatattttgccaaacaacttttaacttaaaaata 8867026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 31 - 86
Target Start/End: Complemental strand, 3053980 - 3053926
Alignment:
Q  31 taataaattcaaagttttgtataatattttgtcaaacaacttttaacttaaaaata 86  Q
    ||||||||| ||||||| ||| ||||||||| |||||||| |||||||||||||||    
T  3053980 taataaatttaaagttt-gtacaatattttgccaaacaacatttaacttaaaaata 3053926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 31 - 90
Target Start/End: Original strand, 18314014 - 18314072
Alignment:
Q  31 taataaattcaaagttttgtataatattttgtcaaacaacttttaacttaaaaataactt 90  Q
    ||||||||||||||||| ||| ||||||||| || ||||| ||||| |||||||||||||    
T  18314014 taataaattcaaagttt-gtacaatattttgccacacaacatttaaattaaaaataactt 18314072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 47 - 86
Target Start/End: Original strand, 34319168 - 34319207
Alignment:
Q  47 ttgtataatattttgtcaaacaacttttaacttaaaaata 86  Q
    ||||| |||||||||||||||||| |||||||||||||||    
T  34319168 ttgtacaatattttgtcaaacaacatttaacttaaaaata 34319207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 64 - 96
Target Start/End: Complemental strand, 10943182 - 10943150
Alignment:
Q  64 aaacaacttttaacttaaaaataacttcagaac 96  Q
    ||||||||||||||||||||||||||| |||||    
T  10943182 aaacaacttttaacttaaaaataactttagaac 10943150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 56; Significance: 3e-23; HSPs: 47)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 34 - 97
Target Start/End: Complemental strand, 4400128 - 4400065
Alignment:
Q  34 taaattcaaagttttgtataatattttgtcaaacaacttttaacttaaaaataacttcagaact 97  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||    
T  4400128 taaattcaaagttttgtacaatattttgtcaaacaacttttaacttaaaaataactttagaact 4400065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 31 - 97
Target Start/End: Complemental strand, 44651948 - 44651882
Alignment:
Q  31 taataaattcaaagttttgtataatattttgtcaaacaacttttaacttaaaaataacttcagaact 97  Q
    ||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||| ||||||    
T  44651948 taataaattcaaagttttgtacaatattttatcaaacaacttttaacttaaaaataactttagaact 44651882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 31 - 97
Target Start/End: Complemental strand, 18956364 - 18956298
Alignment:
Q  31 taataaattcaaagttttgtataatattttgtcaaacaacttttaacttaaaaataacttcagaact 97  Q
    ||||||||||||||||||||||||||||||| |||||| ||||||||| ||||||||||| ||||||    
T  18956364 taataaattcaaagttttgtataatattttgccaaacagcttttaactcaaaaataactttagaact 18956298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 31 - 97
Target Start/End: Complemental strand, 41343386 - 41343320
Alignment:
Q  31 taataaattcaaagttttgtataatattttgtcaaacaacttttaacttaaaaataacttcagaact 97  Q
    ||||||||||||||||||||| ||||||||| |||||||| ||||||||||||||||||| ||||||    
T  41343386 taataaattcaaagttttgtacaatattttgccaaacaacatttaacttaaaaataactttagaact 41343320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 31 - 95
Target Start/End: Original strand, 45620656 - 45620720
Alignment:
Q  31 taataaattcaaagttttgtataatattttgtcaaacaacttttaacttaaaaataacttcagaa 95  Q
    ||||||||||||||||||||| ||||||||| |||||| ||||||||||||||||||||| ||||    
T  45620656 taataaattcaaagttttgtacaatattttgccaaacagcttttaacttaaaaataactttagaa 45620720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 31 - 90
Target Start/End: Complemental strand, 4406693 - 4406634
Alignment:
Q  31 taataaattcaaagttttgtataatattttgtcaaacaacttttaacttaaaaataactt 90  Q
    ||||||||||||||||||||| ||||||||| ||||||||||||||||||||| ||||||    
T  4406693 taataaattcaaagttttgtacaatattttgccaaacaacttttaacttaaaattaactt 4406634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 31 - 86
Target Start/End: Original strand, 4615399 - 4615454
Alignment:
Q  31 taataaattcaaagttttgtataatattttgtcaaacaacttttaacttaaaaata 86  Q
    ||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||    
T  4615399 taataaattcaaagttttgtacaatattttgccaaacaacttttaacttaaaaata 4615454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 34 - 97
Target Start/End: Original strand, 47840740 - 47840803
Alignment:
Q  34 taaattcaaagttttgtataatattttgtcaaacaacttttaacttaaaaataacttcagaact 97  Q
    |||||||||||||||||| ||||||||| ||||||||||| |||||||||||||||| ||||||    
T  47840740 taaattcaaagttttgtacaatattttgccaaacaactttcaacttaaaaataactttagaact 47840803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 31 - 97
Target Start/End: Original strand, 10999119 - 10999185
Alignment:
Q  31 taataaattcaaagttttgtataatattttgtcaaacaacttttaacttaaaaataacttcagaact 97  Q
    ||||||||||||||||||||| ||||||||| |||||| ||||||||| ||||||||||| ||||||    
T  10999119 taataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 10999185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 31 - 97
Target Start/End: Original strand, 12907918 - 12907984
Alignment:
Q  31 taataaattcaaagttttgtataatattttgtcaaacaacttttaacttaaaaataacttcagaact 97  Q
    ||||||||||||||||||||| ||||||||| |||||| ||||||||| ||||||||||| ||||||    
T  12907918 taataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 12907984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 31 - 97
Target Start/End: Original strand, 17278161 - 17278227
Alignment:
Q  31 taataaattcaaagttttgtataatattttgtcaaacaacttttaacttaaaaataacttcagaact 97  Q
    ||||||||||||||||||||| ||||||||| |||||| ||||||||| ||||||||||| ||||||    
T  17278161 taataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 17278227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 39 - 97
Target Start/End: Complemental strand, 21134414 - 21134356
Alignment:
Q  39 tcaaagttttgtataatattttgtcaaacaacttttaacttaaaaataacttcagaact 97  Q
    ||||||||||||| ||||||||| |||||||||||||||||||||||||||| ||||||    
T  21134414 tcaaagttttgtacaatattttgccaaacaacttttaacttaaaaataactttagaact 21134356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 31 - 97
Target Start/End: Complemental strand, 27031295 - 27031229
Alignment:
Q  31 taataaattcaaagttttgtataatattttgtcaaacaacttttaacttaaaaataacttcagaact 97  Q
    ||||||||||||||||||||| ||||||||| |||||| ||||||||| ||||||||||| ||||||    
T  27031295 taataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 27031229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 31 - 97
Target Start/End: Complemental strand, 29448783 - 29448717
Alignment:
Q  31 taataaattcaaagttttgtataatattttgtcaaacaacttttaacttaaaaataacttcagaact 97  Q
    ||||||||||||||||||||| ||||||||| |||||| ||||||||| ||||||||||| ||||||    
T  29448783 taataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 29448717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 31 - 97
Target Start/End: Complemental strand, 32960862 - 32960796
Alignment:
Q  31 taataaattcaaagttttgtataatattttgtcaaacaacttttaacttaaaaataacttcagaact 97  Q
    ||||||||||||||||||||| ||||||||| |||||| ||||||||| ||||||||||| ||||||    
T  32960862 taataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 32960796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 31 - 97
Target Start/End: Complemental strand, 40239963 - 40239897
Alignment:
Q  31 taataaattcaaagttttgtataatattttgtcaaacaacttttaacttaaaaataacttcagaact 97  Q
    ||||||||||||||||||||| ||||||||| |||||| ||||||||| ||||||||||| ||||||    
T  40239963 taataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 40239897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 31 - 97
Target Start/End: Original strand, 41426970 - 41427036
Alignment:
Q  31 taataaattcaaagttttgtataatattttgtcaaacaacttttaacttaaaaataacttcagaact 97  Q
    ||||||||||||||||||||| ||||||||| |||||| ||||||||| ||||||||||| ||||||    
T  41426970 taataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 41427036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 37 - 86
Target Start/End: Original strand, 3840030 - 3840079
Alignment:
Q  37 attcaaagttttgtataatattttgtcaaacaacttttaacttaaaaata 86  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  3840030 attcaaagttttgtacaatattttgtcaaacaacttttaacttaaaaata 3840079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 31 - 97
Target Start/End: Original strand, 5526114 - 5526177
Alignment:
Q  31 taataaattcaaagttttgtataatattttgtcaaacaacttttaacttaaaaataacttcagaact 97  Q
    ||||||||||||||||||||| ||||||||||||   ||||||||||||||||||||||| ||||||    
T  5526114 taataaattcaaagttttgtacaatattttgtca---aacttttaacttaaaaataactttagaact 5526177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 31 - 95
Target Start/End: Complemental strand, 23639481 - 23639417
Alignment:
Q  31 taataaattcaaagttttgtataatattttgtcaaacaacttttaacttaaaaataacttcagaa 95  Q
    ||||||||||||||||||||| ||||||||| |||||| ||||||||| ||||||||||| ||||    
T  23639481 taataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaa 23639417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 31 - 95
Target Start/End: Complemental strand, 37669335 - 37669271
Alignment:
Q  31 taataaattcaaagttttgtataatattttgtcaaacaacttttaacttaaaaataacttcagaa 95  Q
    ||||||||||||||||||||| ||||||||| |||||| ||||||||| ||||||||||| ||||    
T  37669335 taataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaa 37669271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 31 - 90
Target Start/End: Original strand, 20482286 - 20482345
Alignment:
Q  31 taataaattcaaagttttgtataatattttgtcaaacaacttttaacttaaaaataactt 90  Q
    ||||||||||||||||||||| ||||||||| |||||||||||||| ||||||| |||||    
T  20482286 taataaattcaaagttttgtacaatattttgccaaacaacttttaaattaaaaaaaactt 20482345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 31 - 90
Target Start/End: Original strand, 40789186 - 40789245
Alignment:
Q  31 taataaattcaaagttttgtataatattttgtcaaacaacttttaacttaaaaataactt 90  Q
    ||||||||||||||||||||| ||||||||| |||||| ||||||||| |||||||||||    
T  40789186 taataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactt 40789245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 31 - 97
Target Start/End: Original strand, 1448107 - 1448173
Alignment:
Q  31 taataaattcaaagttttgtataatattttgtcaaacaacttttaacttaaaaataacttcagaact 97  Q
    ||||||||||||||||||||| ||||||||| |||||| ||||||||| ||||||| ||| ||||||    
T  1448107 taataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaatagctttagaact 1448173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 31 - 97
Target Start/End: Original strand, 6607103 - 6607169
Alignment:
Q  31 taataaattcaaagttttgtataatattttgtcaaacaacttttaacttaaaaataacttcagaact 97  Q
    ||||||||| ||||||||||||||||||||| ||||||  ||||||||||||||||| || ||||||    
T  6607103 taataaatttaaagttttgtataatattttgccaaacagattttaacttaaaaataaatttagaact 6607169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 39 - 81
Target Start/End: Original strand, 35910287 - 35910329
Alignment:
Q  39 tcaaagttttgtataatattttgtcaaacaacttttaacttaa 81  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  35910287 tcaaagttttgtataatattttgtcaaacaacttttaacttaa 35910329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 31 - 97
Target Start/End: Original strand, 36769232 - 36769298
Alignment:
Q  31 taataaattcaaagttttgtataatattttgtcaaacaacttttaacttaaaaataacttcagaact 97  Q
    ||||||||| |||||||||||   ||||||| |||||||||||||||||||||||||||| ||||||    
T  36769232 taataaatttaaagttttgtactttattttgccaaacaacttttaacttaaaaataactttagaact 36769298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 31 - 97
Target Start/End: Original strand, 38045664 - 38045730
Alignment:
Q  31 taataaattcaaagttttgtataatattttgtcaaacaacttttaacttaaaaataacttcagaact 97  Q
    |||||||||||||| |||||| ||||||||| |||||| ||||||||| ||||||||||| ||||||    
T  38045664 taataaattcaaagctttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 38045730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 31 - 84
Target Start/End: Original strand, 4404301 - 4404354
Alignment:
Q  31 taataaattcaaagttttgtataatattttgtcaaacaacttttaacttaaaaa 84  Q
    |||||||||||| |||||||| ||||||||| ||||||||||||||||||||||    
T  4404301 taataaattcaatgttttgtacaatattttgccaaacaacttttaacttaaaaa 4404354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 39 - 96
Target Start/End: Original strand, 5483420 - 5483477
Alignment:
Q  39 tcaaagttttgtataatattttgtcaaacaacttttaacttaaaaataacttcagaac 96  Q
    ||||||||||||| ||||||||  |||||||||||||||||||||||||||| |||||    
T  5483420 tcaaagttttgtacaatatttttccaaacaacttttaacttaaaaataactttagaac 5483477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 36 - 97
Target Start/End: Original strand, 43156203 - 43156264
Alignment:
Q  36 aattcaaagttttgtataatattttgtcaaacaacttttaacttaaaaataacttcagaact 97  Q
    |||||||||||||||| ||||||||| |||||| ||||||||| ||||||||||| ||||||    
T  43156203 aattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 43156264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 41 - 97
Target Start/End: Original strand, 36765592 - 36765648
Alignment:
Q  41 aaagttttgtataatattttgtcaaacaacttttaacttaaaaataacttcagaact 97  Q
    |||||||||||   |||||||||||||||||||||||||||||||||||| ||||||    
T  36765592 aaagttttgtactttattttgtcaaacaacttttaacttaaaaataactttagaact 36765648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 36 - 86
Target Start/End: Original strand, 17816601 - 17816650
Alignment:
Q  36 aattcaaagttttgtataatattttgtcaaacaacttttaacttaaaaata 86  Q
    |||||||||||| ||| ||||||||||||||||||||||||||||||||||    
T  17816601 aattcaaagttt-gtacaatattttgtcaaacaacttttaacttaaaaata 17816650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 36 - 86
Target Start/End: Complemental strand, 19050400 - 19050351
Alignment:
Q  36 aattcaaagttttgtataatattttgtcaaacaacttttaacttaaaaata 86  Q
    |||||||||||| ||| ||||||||||||||||||||||||||||||||||    
T  19050400 aattcaaagttt-gtacaatattttgtcaaacaacttttaacttaaaaata 19050351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 41 - 90
Target Start/End: Complemental strand, 40036083 - 40036034
Alignment:
Q  41 aaagttttgtataatattttgtcaaacaacttttaacttaaaaataactt 90  Q
    ||||||||||| ||||||||| |||| |||||||||||||||||||||||    
T  40036083 aaagttttgtacaatattttgccaaaaaacttttaacttaaaaataactt 40036034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 31 - 83
Target Start/End: Complemental strand, 4492500 - 4492448
Alignment:
Q  31 taataaattcaaagttttgtataatattttgtcaaacaacttttaacttaaaa 83  Q
    ||||||||||||||||||||| ||||||||| |||| ||||||||| ||||||    
T  4492500 taataaattcaaagttttgtacaatattttgccaaataacttttaatttaaaa 4492448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 31 - 90
Target Start/End: Complemental strand, 4408101 - 4408043
Alignment:
Q  31 taataaattcaaagttttgtataatattttgtcaaacaacttttaacttaaaaataactt 90  Q
    |||||||||||||||||  || ||||||||| |||||| |||||||||||||||||||||    
T  4408101 taataaattcaaagttta-tacaatattttgccaaacagcttttaacttaaaaataactt 4408043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 43 - 97
Target Start/End: Original strand, 23154654 - 23154707
Alignment:
Q  43 agttttgtataatattttgtcaaacaacttttaacttaaaaataacttcagaact 97  Q
    ||||||||| ||||||||| ||||||||||||||||| |||||||||| ||||||    
T  23154654 agttttgtacaatattttgccaaacaacttttaactt-aaaataactttagaact 23154707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 34 - 74
Target Start/End: Complemental strand, 20135139 - 20135099
Alignment:
Q  34 taaattcaaagttttgtataatattttgtcaaacaactttt 74  Q
    |||||||||||||||||| ||||||||| ||||||||||||    
T  20135139 taaattcaaagttttgtacaatattttgccaaacaactttt 20135099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 31 - 82
Target Start/End: Original strand, 20762921 - 20762971
Alignment:
Q  31 taataaattcaaagttttgtataatattttgtcaaacaacttttaacttaaa 82  Q
    ||||||||||||||||| ||| |||||||||||||||||| || ||||||||    
T  20762921 taataaattcaaagttt-gtacaatattttgtcaaacaacattaaacttaaa 20762971  T

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Target: chr7; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 31 - 73
Target Start/End: Complemental strand, 16933535 - 16933493
Alignment:
Q  31 taataaattcaaagttttgtataatattttgtcaaacaacttt 73  Q
    |||||||||||| |||||||| |||||||||||||| ||||||    
T  16933535 taataaattcaatgttttgtacaatattttgtcaaataacttt 16933493  T

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Target: chr7; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 31 - 73
Target Start/End: Complemental strand, 16938918 - 16938876
Alignment:
Q  31 taataaattcaaagttttgtataatattttgtcaaacaacttt 73  Q
    |||||||||||| |||||||| |||||||||||||| ||||||    
T  16938918 taataaattcaatgttttgtacaatattttgtcaaataacttt 16938876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 31 - 73
Target Start/End: Original strand, 43111041 - 43111083
Alignment:
Q  31 taataaattcaaagttttgtataatattttgtcaaacaacttt 73  Q
    ||||||||||||||||||||| ||||||||| |||| ||||||    
T  43111041 taataaattcaaagttttgtacaatattttgccaaataacttt 43111083  T

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Target: chr7; HSP #44
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 46 - 83
Target Start/End: Complemental strand, 42828932 - 42828895
Alignment:
Q  46 tttgtataatattttgtcaaacaacttttaacttaaaa 83  Q
    |||||| |||||||||||||||||| ||||||||||||    
T  42828932 tttgtacaatattttgtcaaacaacatttaacttaaaa 42828895  T

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Target: chr7; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 35 - 87
Target Start/End: Complemental strand, 38049299 - 38049247
Alignment:
Q  35 aaattcaaagttttgtataatattttgtcaaacaacttttaacttaaaaataa 87  Q
    ||||| |||||| |||| ||||||||  |||||||||||||| ||||||||||    
T  38049299 aaattaaaagttgtgtacaatattttaccaaacaacttttaatttaaaaataa 38049247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 46 - 86
Target Start/End: Original strand, 42915378 - 42915418
Alignment:
Q  46 tttgtataatattttgtcaaacaacttttaacttaaaaata 86  Q
    |||||| ||||||||| |||||||| |||||||||||||||    
T  42915378 tttgtacaatattttgccaaacaacatttaacttaaaaata 42915418  T

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Target: chr7; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 46 - 86
Target Start/End: Original strand, 47171662 - 47171702
Alignment:
Q  46 tttgtataatattttgtcaaacaacttttaacttaaaaata 86  Q
    |||||| ||||||||||||| |||| |||||||||||||||    
T  47171662 tttgtacaatattttgtcaagcaacatttaacttaaaaata 47171702  T

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Target: scaffold0198 (Bit Score: 55; Significance: 1e-22; HSPs: 1)
Name: scaffold0198
Description:

Target: scaffold0198; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 31 - 97
Target Start/End: Complemental strand, 15327 - 15261
Alignment:
Q  31 taataaattcaaagttttgtataatattttgtcaaacaacttttaacttaaaaataacttcagaact 97  Q
    ||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||| ||||||    
T  15327 taataaattcaaagttttgtacaatattttgccaaacaacttttaacttaaaaataactttagaact 15261  T

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Target: chr8 (Bit Score: 55; Significance: 1e-22; HSPs: 58)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 31 - 97
Target Start/End: Original strand, 6816039 - 6816105
Alignment:
Q  31 taataaattcaaagttttgtataatattttgtcaaacaacttttaacttaaaaataacttcagaact 97  Q
    ||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||| ||||||    
T  6816039 taataaattcaaagttttgtacaatattttgtcaaacagcttttaacttaaaaataactttagaact 6816105  T

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Target: chr8; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 31 - 97
Target Start/End: Original strand, 11924775 - 11924841
Alignment:
Q  31 taataaattcaaagttttgtataatattttgtcaaacaacttttaacttaaaaataacttcagaact 97  Q
    ||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||| ||||||    
T  11924775 taataaattcaaagttttgtacaatattttgtcaaacagcttttaacttaaaaataactttagaact 11924841  T

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Target: chr8; HSP #3
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 31 - 97
Target Start/End: Complemental strand, 36059342 - 36059276
Alignment:
Q  31 taataaattcaaagttttgtataatattttgtcaaacaacttttaacttaaaaataacttcagaact 97  Q
    ||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||| ||||||    
T  36059342 taataaattcaaagttttgtacaatattttgccaaacaacttttaacttaaaaataactttagaact 36059276  T

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Target: chr8; HSP #4
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 31 - 97
Target Start/End: Complemental strand, 36216642 - 36216576
Alignment:
Q  31 taataaattcaaagttttgtataatattttgtcaaacaacttttaacttaaaaataacttcagaact 97  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||| ||||||    
T  36216642 taataaattcaaagttttgtataatattttgccaaacaacttttaactcaaaaataactttagaact 36216576  T

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Target: chr8; HSP #5
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 31 - 97
Target Start/End: Original strand, 37034832 - 37034898
Alignment:
Q  31 taataaattcaaagttttgtataatattttgtcaaacaacttttaacttaaaaataacttcagaact 97  Q
    ||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||| ||||||    
T  37034832 taataaattcaaagttttgtacaatattttgccaaacaacttttaacttaaaaataactttagaact 37034898  T

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Target: chr8; HSP #6
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 31 - 97
Target Start/End: Original strand, 38139319 - 38139385
Alignment:
Q  31 taataaattcaaagttttgtataatattttgtcaaacaacttttaacttaaaaataacttcagaact 97  Q
    ||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||| ||||||    
T  38139319 taataaattcaaagttttgtacaatattttgccaaacaacttttaacttaaaaataactttagaact 38139385  T

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Target: chr8; HSP #7
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 31 - 95
Target Start/End: Complemental strand, 38137785 - 38137721
Alignment:
Q  31 taataaattcaaagttttgtataatattttgtcaaacaacttttaacttaaaaataacttcagaa 95  Q
    ||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||| ||||    
T  38137785 taataaattcaaagttttgtacaatattttatcaaacaacttttaacttaaaaataactttagaa 38137721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 31 - 97
Target Start/End: Original strand, 38909294 - 38909360
Alignment:
Q  31 taataaattcaaagttttgtataatattttgtcaaacaacttttaacttaaaaataacttcagaact 97  Q
    ||||||||||||| ||||||| ||||||||||||| |||||||||||||||||||||||| ||||||    
T  38909294 taataaattcaaaattttgtacaatattttgtcaagcaacttttaacttaaaaataactttagaact 38909360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 31 - 89
Target Start/End: Complemental strand, 39486094 - 39486036
Alignment:
Q  31 taataaattcaaagttttgtataatattttgtcaaacaacttttaacttaaaaataact 89  Q
    ||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||    
T  39486094 taataaattcaaagttttgtacaatattttgccaaacaacttttaacttaaaaataact 39486036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 31 - 97
Target Start/End: Original strand, 44908503 - 44908569
Alignment:
Q  31 taataaattcaaagttttgtataatattttgtcaaacaacttttaacttaaaaataacttcagaact 97  Q
    ||||||||||||||||||||| |||||||||||||||| ||||||||| ||||||||||| ||||||    
T  44908503 taataaattcaaagttttgtacaatattttgtcaaacagcttttaactcaaaaataactttagaact 44908569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 31 - 90
Target Start/End: Original strand, 41360997 - 41361056
Alignment:
Q  31 taataaattcaaagttttgtataatattttgtcaaacaacttttaacttaaaaataactt 90  Q
    ||||||||||||||||||||||||||||||| |||||| ||||||||| |||||||||||    
T  41360997 taataaattcaaagttttgtataatattttgccaaacagcttttaactcaaaaataactt 41361056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 31 - 97
Target Start/End: Complemental strand, 169771 - 169705
Alignment:
Q  31 taataaattcaaagttttgtataatattttgtcaaacaacttttaacttaaaaataacttcagaact 97  Q
    ||||||||||||||||||||| ||||||||| ||||||  |||||||||||||||||||| ||||||    
T  169771 taataaattcaaagttttgtacaatattttgccaaacagtttttaacttaaaaataactttagaact 169705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 31 - 97
Target Start/End: Complemental strand, 1877644 - 1877578
Alignment:
Q  31 taataaattcaaagttttgtataatattttgtcaaacaacttttaacttaaaaataacttcagaact 97  Q
    ||||||||||||||||||||| ||||||||| ||||||| |||||||||||||||||| | ||||||    
T  1877644 taataaattcaaagttttgtacaatattttgccaaacaatttttaacttaaaaataacgttagaact 1877578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 31 - 97
Target Start/End: Original strand, 7219386 - 7219452
Alignment:
Q  31 taataaattcaaagttttgtataatattttgtcaaacaacttttaacttaaaaataacttcagaact 97  Q
    ||||||||||||| ||||||| ||||||||| |||||||||||||||| ||||||||||| ||||||    
T  7219386 taataaattcaaaattttgtacaatattttgccaaacaacttttaactcaaaaataactttagaact 7219452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 31 - 97
Target Start/End: Complemental strand, 16239234 - 16239168
Alignment:
Q  31 taataaattcaaagttttgtataatattttgtcaaacaacttttaacttaaaaataacttcagaact 97  Q
    ||||||||||||||||||||| ||||||||| |||||| ||||||||| ||||||||||| ||||||    
T  16239234 taataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 16239168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 31 - 97
Target Start/End: Complemental strand, 17046076 - 17046010
Alignment:
Q  31 taataaattcaaagttttgtataatattttgtcaaacaacttttaacttaaaaataacttcagaact 97  Q
    ||||||||||||||||||||| ||||||||| |||||| ||||||||| ||||||||||| ||||||    
T  17046076 taataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 17046010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 31 - 97
Target Start/End: Complemental strand, 17313607 - 17313541
Alignment:
Q  31 taataaattcaaagttttgtataatattttgtcaaacaacttttaacttaaaaataacttcagaact 97  Q
    ||||||||||||||||||||| ||||||||| |||||| ||||||||| ||||||||||| ||||||    
T  17313607 taataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 17313541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 31 - 97
Target Start/End: Original strand, 39525460 - 39525526
Alignment:
Q  31 taataaattcaaagttttgtataatattttgtcaaacaacttttaacttaaaaataacttcagaact 97  Q
    ||||||||||||||||||| | ||||||||| |||||||||||||| ||||||||||||| ||||||    
T  39525460 taataaattcaaagttttgcacaatattttgccaaacaacttttaaattaaaaataactttagaact 39525526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 31 - 97
Target Start/End: Original strand, 39685430 - 39685496
Alignment:
Q  31 taataaattcaaagttttgtataatattttgtcaaacaacttttaacttaaaaataacttcagaact 97  Q
    ||||||||||||||||||||| ||||||||| |||||| ||||||||| ||||||||||| ||||||    
T  39685430 taataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 39685496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 31 - 97
Target Start/End: Complemental strand, 43818030 - 43817964
Alignment:
Q  31 taataaattcaaagttttgtataatattttgtcaaacaacttttaacttaaaaataacttcagaact 97  Q
    ||||||||||||| ||||||| |||||||||||||||| ||||||||| ||||||||||| ||||||    
T  43818030 taataaattcaaaattttgtacaatattttgtcaaacagcttttaactcaaaaataactttagaact 43817964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 31 - 97
Target Start/End: Complemental strand, 44603004 - 44602938
Alignment:
Q  31 taataaattcaaagttttgtataatattttgtcaaacaacttttaacttaaaaataacttcagaact 97  Q
    ||||||||||||||||||||| ||||||||| |||||| ||||||||| ||||||||||| ||||||    
T  44603004 taataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 44602938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 32 - 97
Target Start/End: Original strand, 27467720 - 27467785
Alignment:
Q  32 aataaattcaaagttttgtataatattttgtcaaacaacttttaacttaaaaataacttcagaact 97  Q
    |||||||||||||||||||| ||||||||| |||||| ||||||||| ||||||||||| ||||||    
T  27467720 aataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 27467785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 35 - 90
Target Start/End: Complemental strand, 12261532 - 12261476
Alignment:
Q  35 aaattcaaagttttgtataatattttgtcaaacaac-ttttaacttaaaaataactt 90  Q
    ||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||    
T  12261532 aaattcaaagttttgtacaatattttgtcaaacaactttttaacttaaaaataactt 12261476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 31 - 87
Target Start/End: Complemental strand, 26518861 - 26518805
Alignment:
Q  31 taataaattcaaagttttgtataatattttgtcaaacaacttttaacttaaaaataa 87  Q
    ||||||||||||||||||||| ||||||||| |||||| ||||||||||||||||||    
T  26518861 taataaattcaaagttttgtacaatattttgccaaacagcttttaacttaaaaataa 26518805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 37 - 84
Target Start/End: Original strand, 9275854 - 9275901
Alignment:
Q  37 attcaaagttttgtataatattttgtcaaacaacttttaacttaaaaa 84  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||    
T  9275854 attcaaagttttgtacaatattttgtcaaacaacttttaacttaaaaa 9275901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 38 - 97
Target Start/End: Original strand, 41526324 - 41526383
Alignment:
Q  38 ttcaaagttttgtataatattttgtcaaacaacttttaacttaaaaataacttcagaact 97  Q
    |||||||||||||| |||||||||  ||||||||||||||||||||||||||| ||||||    
T  41526324 ttcaaagttttgtacaatattttgctaaacaacttttaacttaaaaataactttagaact 41526383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 31 - 97
Target Start/End: Complemental strand, 2184476 - 2184410
Alignment:
Q  31 taataaattcaaagttttgtataatattttgtcaaacaacttttaacttaaaaataacttcagaact 97  Q
    ||||||||| ||||||||||| ||||||||| |||||| |||||||||| |||||||||| ||||||    
T  2184476 taataaatttaaagttttgtacaatattttgccaaacagcttttaactttaaaataactttagaact 2184410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 35 - 97
Target Start/End: Original strand, 11579204 - 11579266
Alignment:
Q  35 aaattcaaagttttgtataatattttgtcaaacaacttttaacttaaaaataacttcagaact 97  Q
    ||||||||| ||||||| ||||||||  |||||||||||||||||||||||||||| ||||||    
T  11579204 aaattcaaatttttgtacaatattttaccaaacaacttttaacttaaaaataactttagaact 11579266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 31 - 97
Target Start/End: Original strand, 14718874 - 14718940
Alignment:
Q  31 taataaattcaaagttttgtataatattttgtcaaacaacttttaacttaaaaataacttcagaact 97  Q
    ||||||||| ||||||||||| ||||||||| |||||| ||||||||| ||||||||||| ||||||    
T  14718874 taataaatttaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 14718940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 31 - 97
Target Start/End: Original strand, 34805796 - 34805862
Alignment:
Q  31 taataaattcaaagttttgtataatattttgtcaaacaacttttaacttaaaaataacttcagaact 97  Q
    ||||||||||||||||||||| ||||||||| |||||| ||||||||| |||||||| || ||||||    
T  34805796 taataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataattttagaact 34805862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 31 - 97
Target Start/End: Original strand, 42844287 - 42844352
Alignment:
Q  31 taataaattcaaagttttgtataatattttgtcaaacaacttttaacttaaaaataacttcagaact 97  Q
    ||||||||| ||||||| ||| ||||||||| |||||||||||||||||||||||||||| ||||||    
T  42844287 taataaatttaaagttt-gtacaatattttgccaaacaacttttaacttaaaaataactttagaact 42844352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 41 - 97
Target Start/End: Complemental strand, 14449667 - 14449611
Alignment:
Q  41 aaagttttgtataatattttgtcaaacaacttttaacttaaaaataacttcagaact 97  Q
    ||||||||||| |||||||||| |||||||||||||| |||||||||||| ||||||    
T  14449667 aaagttttgtacaatattttgttaaacaacttttaacataaaaataactttagaact 14449611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 42 - 90
Target Start/End: Original strand, 27748853 - 27748901
Alignment:
Q  42 aagttttgtataatattttgtcaaacaacttttaacttaaaaataactt 90  Q
    |||||||| ||||||||||| ||||||||||||||||||||||||||||    
T  27748853 aagttttgcataatattttgccaaacaacttttaacttaaaaataactt 27748901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 42 - 90
Target Start/End: Original strand, 27877985 - 27878033
Alignment:
Q  42 aagttttgtataatattttgtcaaacaacttttaacttaaaaataactt 90  Q
    |||||||||| ||||||||||||||||||||||||||||||| ||||||    
T  27877985 aagttttgtacaatattttgtcaaacaacttttaacttaaaactaactt 27878033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 42 - 90
Target Start/End: Original strand, 28018166 - 28018214
Alignment:
Q  42 aagttttgtataatattttgtcaaacaacttttaacttaaaaataactt 90  Q
    |||||||||| ||||||||||||||||||||||||||||||| ||||||    
T  28018166 aagttttgtacaatattttgtcaaacaacttttaacttaaaactaactt 28018214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 31 - 87
Target Start/End: Original strand, 44655074 - 44655130
Alignment:
Q  31 taataaattcaaagttttgtataatattttgtcaaacaacttttaacttaaaaataa 87  Q
    |||| ||||||||||||||||||| |||||| |||||||||||| ||||||||||||    
T  44655074 taattaattcaaagttttgtataaaattttgccaaacaacttttgacttaaaaataa 44655130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 31 - 97
Target Start/End: Complemental strand, 2190713 - 2190647
Alignment:
Q  31 taataaattcaaagttttgtataatattttgtcaaacaacttttaacttaaaaataacttcagaact 97  Q
    ||||||||| ||||||||||| ||||||||| |||||| |||||||||| ||||||| || ||||||    
T  2190713 taataaatttaaagttttgtacaatattttgccaaacagcttttaacttcaaaataattttagaact 2190647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 31 - 97
Target Start/End: Original strand, 16845035 - 16845101
Alignment:
Q  31 taataaattcaaagttttgtataatattttgtcaaacaacttttaacttaaaaataacttcagaact 97  Q
    ||||||||||||| ||||||| ||||||||| |||||| ||||||| | ||||||||||| ||||||    
T  16845035 taataaattcaaaattttgtacaatattttgccaaacagcttttaattcaaaaataactttagaact 16845101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 31 - 89
Target Start/End: Original strand, 34997538 - 34997596
Alignment:
Q  31 taataaattcaaagttttgtataatattttgtcaaacaacttttaacttaaaaataact 89  Q
    ||||||||||  | ||||||| ||||||||| |||||||||||||||||||||||||||    
T  34997538 taataaattcctaattttgtacaatattttgccaaacaacttttaacttaaaaataact 34997596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 35 - 97
Target Start/End: Original strand, 42984002 - 42984064
Alignment:
Q  35 aaattcaaagttttgtataatattttgtcaaacaacttttaacttaaaaataacttcagaact 97  Q
    ||||| || |||||||| ||||||||  |||||||||||||||||||||||||||| ||||||    
T  42984002 aaattaaatgttttgtacaatatttttccaaacaacttttaacttaaaaataactttagaact 42984064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 31 - 88
Target Start/End: Original strand, 34325870 - 34325927
Alignment:
Q  31 taataaattcaaagttttgtataatattttgtcaaacaacttttaacttaaaaataac 88  Q
    ||||||||| ||| |||| || ||||||||||||||||||||||||||||| ||||||    
T  34325870 taataaatttaaaattttttacaatattttgtcaaacaacttttaacttaagaataac 34325927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 42 - 86
Target Start/End: Original strand, 24511538 - 24511582
Alignment:
Q  42 aagttttgtataatattttgtcaaacaacttttaacttaaaaata 86  Q
    ||||||||||||||||||| ||||||||||||||| |||||||||    
T  24511538 aagttttgtataatattttctcaaacaacttttaatttaaaaata 24511582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 42 - 90
Target Start/End: Original strand, 27914929 - 27914977
Alignment:
Q  42 aagttttgtataatattttgtcaaacaacttttaacttaaaaataactt 90  Q
    |||||||||| ||||||||| ||||||||||||||||||||| ||||||    
T  27914929 aagttttgtacaatattttgccaaacaacttttaacttaaaagtaactt 27914977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 42 - 90
Target Start/End: Original strand, 27961348 - 27961396
Alignment:
Q  42 aagttttgtataatattttgtcaaacaacttttaacttaaaaataactt 90  Q
    |||||||||| ||||||||| ||||||||||||||||||||| ||||||    
T  27961348 aagttttgtacaatattttgccaaacaacttttaacttaaaagtaactt 27961396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 35 - 97
Target Start/End: Original strand, 15310407 - 15310470
Alignment:
Q  35 aaattcaaagttttgtataatattttgtcaaac-aacttttaacttaaaaataacttcagaact 97  Q
    |||||||||||||| || ||||||||| ||||| |||||||||||||||||||| || ||||||    
T  15310407 aaattcaaagttttctacaatattttgccaaacaaacttttaacttaaaaataaatttagaact 15310470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 35 - 97
Target Start/End: Original strand, 15490776 - 15490839
Alignment:
Q  35 aaattcaaagttttgtataatattttgtcaaac-aacttttaacttaaaaataacttcagaact 97  Q
    |||||||||||||| || ||||||||| ||||| |||||||||||||||||||| || ||||||    
T  15490776 aaattcaaagttttctacaatattttgccaaacaaacttttaacttaaaaataaatttagaact 15490839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 39 - 90
Target Start/End: Complemental strand, 45139108 - 45139057
Alignment:
Q  39 tcaaagttttgtataatattttgtcaaacaacttttaacttaaaaataactt 90  Q
    ||||| ||||||| ||||||||| | ||||||||||||||||||||||||||    
T  45139108 tcaaaattttgtacaatattttgccgaacaacttttaacttaaaaataactt 45139057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 31 - 86
Target Start/End: Original strand, 1922396 - 1922448
Alignment:
Q  31 taataaattcaaagttttgtataatattttgtcaaacaacttttaacttaaaaata 86  Q
    ||||||||||||||||||||| ||||||||||||   ||||||||| |||||||||    
T  1922396 taataaattcaaagttttgtacaatattttgtca---aacttttaatttaaaaata 1922448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 40 - 97
Target Start/End: Original strand, 39997991 - 39998048
Alignment:
Q  40 caaagttttgtataatattttgtcaaacaacttttaacttaaaaataacttcagaact 97  Q
    |||||||||||| ||| |||||  ||||||||||||||| ||||||||||| ||||||    
T  39997991 caaagttttgtacaattttttgctaaacaacttttaactcaaaaataactttagaact 39998048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 31 - 82
Target Start/End: Complemental strand, 30551020 - 30550970
Alignment:
Q  31 taataaattcaaagttttgtataatattttgtcaaacaacttttaacttaaa 82  Q
    ||||||||||||||||| ||| |||||||||||||||||| || ||||||||    
T  30551020 taataaattcaaagttt-gtacaatattttgtcaaacaacattaaacttaaa 30550970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 31 - 82
Target Start/End: Complemental strand, 44215769 - 44215719
Alignment:
Q  31 taataaattcaaagttttgtataatattttgtcaaacaacttttaacttaaa 82  Q
    ||||||||||||||||| ||| |||||||||||||||||| || ||||||||    
T  44215769 taataaattcaaagttt-gtacaatattttgtcaaacaacattaaacttaaa 44215719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 42 - 92
Target Start/End: Complemental strand, 41903183 - 41903133
Alignment:
Q  42 aagttttgtataatattttgtcaaacaacttttaacttaaaaataacttca 92  Q
    ||||||| || ||||||||| ||||||| ||||||||||||||||| ||||    
T  41903183 aagttttatacaatattttgccaaacaaattttaacttaaaaataaattca 41903133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 35 - 95
Target Start/End: Complemental strand, 40048739 - 40048678
Alignment:
Q  35 aaattcaaagttttgtataatattttgtcaaa-caacttttaacttaaaaataacttcagaa 95  Q
    ||||||||||||||| | |||||| ||  ||| |||||||||||||||||||||||| ||||    
T  40048739 aaattcaaagttttggacaatattctgcaaaaacaacttttaacttaaaaataactttagaa 40048678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 46 - 86
Target Start/End: Original strand, 19245451 - 19245491
Alignment:
Q  46 tttgtataatattttgtcaaacaacttttaacttaaaaata 86  Q
    |||||| |||||||||||||||||| |||||||| ||||||    
T  19245451 tttgtacaatattttgtcaaacaacatttaacttcaaaata 19245491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 46 - 86
Target Start/End: Original strand, 19318635 - 19318675
Alignment:
Q  46 tttgtataatattttgtcaaacaacttttaacttaaaaata 86  Q
    |||||| |||||||||||||||||| |||||||| ||||||    
T  19318635 tttgtacaatattttgtcaaacaacatttaacttcaaaata 19318675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 43 - 83
Target Start/End: Complemental strand, 39140852 - 39140812
Alignment:
Q  43 agttttgtataatattttgtcaaacaacttttaacttaaaa 83  Q
    ||||||||| |||||||||  ||||||||||||||||||||    
T  39140852 agttttgtacaatattttgctaaacaacttttaacttaaaa 39140812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 46 - 86
Target Start/End: Original strand, 41904778 - 41904818
Alignment:
Q  46 tttgtataatattttgtcaaacaacttttaacttaaaaata 86  Q
    |||||| ||||||||| |||||||| |||||||||||||||    
T  41904778 tttgtacaatattttgccaaacaacatttaacttaaaaata 41904818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 46 - 86
Target Start/End: Complemental strand, 45296836 - 45296796
Alignment:
Q  46 tttgtataatattttgtcaaacaacttttaacttaaaaata 86  Q
    |||||| ||||||||| |||||||| |||||||||||||||    
T  45296836 tttgtacaatattttgccaaacaacatttaacttaaaaata 45296796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 55; Significance: 1e-22; HSPs: 31)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 31 - 97
Target Start/End: Complemental strand, 3243361 - 3243295
Alignment:
Q  31 taataaattcaaagttttgtataatattttgtcaaacaacttttaacttaaaaataacttcagaact 97  Q
    ||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||| ||||||    
T  3243361 taataaattcaaagttttgtacaatattttgccaaacaacttttaacttaaaaataactttagaact 3243295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 31 - 97
Target Start/End: Original strand, 10120618 - 10120684
Alignment:
Q  31 taataaattcaaagttttgtataatattttgtcaaacaacttttaacttaaaaataacttcagaact 97  Q
    ||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||    
T  10120618 taataaatttaaagttttgtacaatattttgtcaaacaacttttaacttaaaaataactttagaact 10120684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 31 - 97
Target Start/End: Complemental strand, 36078622 - 36078556
Alignment:
Q  31 taataaattcaaagttttgtataatattttgtcaaacaacttttaacttaaaaataacttcagaact 97  Q
    ||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||| ||||||    
T  36078622 taataaattcaaagttttgtacaatattttgtcaaacaccttttaacttaaaaataactttagaact 36078556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 31 - 97
Target Start/End: Original strand, 38879145 - 38879211
Alignment:
Q  31 taataaattcaaagttttgtataatattttgtcaaacaacttttaacttaaaaataacttcagaact 97  Q
    ||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||| ||||||    
T  38879145 taataaattcaaagttttgtaaaatattttgccaaacaacttttaacttaaaaataactttagaact 38879211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 31 - 95
Target Start/End: Original strand, 34912660 - 34912724
Alignment:
Q  31 taataaattcaaagttttgtataatattttgtcaaacaacttttaacttaaaaataacttcagaa 95  Q
    ||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||| ||||    
T  34912660 taataaattcaaagttttgtacaatattttgccaaacaacttttaacttaaaaataactttagaa 34912724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 35 - 90
Target Start/End: Original strand, 38709708 - 38709763
Alignment:
Q  35 aaattcaaagttttgtataatattttgtcaaacaacttttaacttaaaaataactt 90  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  38709708 aaattcaaagttttgtacaatattttgtcaaacaacttttaacttaaaaataactt 38709763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 31 - 90
Target Start/End: Complemental strand, 9799391 - 9799332
Alignment:
Q  31 taataaattcaaagttttgtataatattttgtcaaacaacttttaacttaaaaataactt 90  Q
    |||||||||||||||||| || |||||||||||||||||||||||||||||||| |||||    
T  9799391 taataaattcaaagttttatacaatattttgtcaaacaacttttaacttaaaaacaactt 9799332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 31 - 97
Target Start/End: Original strand, 970962 - 971028
Alignment:
Q  31 taataaattcaaagttttgtataatattttgtcaaacaacttttaacttaaaaataacttcagaact 97  Q
    ||||||||||||||||||||| ||||||||| |||||| ||||||||| ||||||||||| ||||||    
T  970962 taataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 971028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 31 - 97
Target Start/End: Original strand, 1835694 - 1835760
Alignment:
Q  31 taataaattcaaagttttgtataatattttgtcaaacaacttttaacttaaaaataacttcagaact 97  Q
    ||||||||||||||||||||| ||||||||| |||||| ||||||||| ||||||||||| ||||||    
T  1835694 taataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 1835760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 39 - 97
Target Start/End: Original strand, 2180035 - 2180093
Alignment:
Q  39 tcaaagttttgtataatattttgtcaaacaacttttaacttaaaaataacttcagaact 97  Q
    |||||||||||||||||||||||  ||||||||||||||||||||||||||| ||||||    
T  2180035 tcaaagttttgtataatattttgcaaaacaacttttaacttaaaaataactttagaact 2180093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 31 - 97
Target Start/End: Original strand, 3079726 - 3079792
Alignment:
Q  31 taataaattcaaagttttgtataatattttgtcaaacaacttttaacttaaaaataacttcagaact 97  Q
    ||||||||||||||||||||  ||||||||| ||||||||||||||||||||||||| || ||||||    
T  3079726 taataaattcaaagttttgtgcaatattttgccaaacaacttttaacttaaaaataaatttagaact 3079792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 31 - 97
Target Start/End: Complemental strand, 3324330 - 3324264
Alignment:
Q  31 taataaattcaaagttttgtataatattttgtcaaacaacttttaacttaaaaataacttcagaact 97  Q
    |||||||||||||||||||||||||||||||  ||||| ||||||||| ||||||||||| ||||||    
T  3324330 taataaattcaaagttttgtataatattttgcgaaacagcttttaactcaaaaataactttagaact 3324264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 31 - 97
Target Start/End: Original strand, 5166275 - 5166341
Alignment:
Q  31 taataaattcaaagttttgtataatattttgtcaaacaacttttaacttaaaaataacttcagaact 97  Q
    ||||||||||||||||||||| ||||||||| |||||| ||||||||| ||||||||||| ||||||    
T  5166275 taataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 5166341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 31 - 97
Target Start/End: Original strand, 7233032 - 7233098
Alignment:
Q  31 taataaattcaaagttttgtataatattttgtcaaacaacttttaacttaaaaataacttcagaact 97  Q
    ||||||||||||||||||||| ||||||||| |||||| ||||||||| ||||||||||| ||||||    
T  7233032 taataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 7233098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 31 - 97
Target Start/End: Original strand, 7274679 - 7274745
Alignment:
Q  31 taataaattcaaagttttgtataatattttgtcaaacaacttttaacttaaaaataacttcagaact 97  Q
    ||||||||||||||||||||| ||||||||| |||||| ||||||||| ||||||||||| ||||||    
T  7274679 taataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 7274745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 31 - 97
Target Start/End: Original strand, 8878128 - 8878194
Alignment:
Q  31 taataaattcaaagttttgtataatattttgtcaaacaacttttaacttaaaaataacttcagaact 97  Q
    ||||||||||||||||||||| ||||||||| |||||| ||||||||| ||||||||||| ||||||    
T  8878128 taataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 8878194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 31 - 97
Target Start/End: Complemental strand, 18166899 - 18166833
Alignment:
Q  31 taataaattcaaagttttgtataatattttgtcaaacaacttttaacttaaaaataacttcagaact 97  Q
    ||||||||||||||||||||| ||||||||| |||||| ||||||||| ||||||||||| ||||||    
T  18166899 taataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 18166833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 31 - 97
Target Start/End: Complemental strand, 24926151 - 24926085
Alignment:
Q  31 taataaattcaaagttttgtataatattttgtcaaacaacttttaacttaaaaataacttcagaact 97  Q
    ||||||||||||||||||||| ||||||||| |||||| ||||||||| ||||||||||| ||||||    
T  24926151 taataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 24926085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 31 - 97
Target Start/End: Original strand, 31972291 - 31972357
Alignment:
Q  31 taataaattcaaagttttgtataatattttgtcaaacaacttttaacttaaaaataacttcagaact 97  Q
    ||||||||||||||||||||| ||||||||| |||||| ||||||||| ||||||||||| ||||||    
T  31972291 taataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 31972357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 31 - 97
Target Start/End: Original strand, 35423795 - 35423861
Alignment:
Q  31 taataaattcaaagttttgtataatattttgtcaaacaacttttaacttaaaaataacttcagaact 97  Q
    ||||||||| ||||||||||| || |||||| |||||||||||||||||||||||||||| ||||||    
T  35423795 taataaatttaaagttttgtacaacattttgccaaacaacttttaacttaaaaataacttaagaact 35423861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 31 - 97
Target Start/End: Complemental strand, 36086013 - 36085947
Alignment:
Q  31 taataaattcaaagttttgtataatattttgtcaaacaacttttaacttaaaaataacttcagaact 97  Q
    ||||||||||||||||||||| ||||||||| |||||| ||||||||| ||||||||||| ||||||    
T  36086013 taataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 36085947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 31 - 97
Target Start/End: Original strand, 40202224 - 40202290
Alignment:
Q  31 taataaattcaaagttttgtataatattttgtcaaacaacttttaacttaaaaataacttcagaact 97  Q
    ||||||||| ||||||||||| ||||||||| | |||||||||||||||||||||||||| ||||||    
T  40202224 taataaatttaaagttttgtacaatattttgcctaacaacttttaacttaaaaataactttagaact 40202290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 35 - 97
Target Start/End: Original strand, 41452828 - 41452890
Alignment:
Q  35 aaattcaaagttttgtataatattttgtcaaacaacttttaacttaaaaataacttcagaact 97  Q
    ||||| ||||||||||| ||||||||| |||||||||||||||||||||||||||| ||||||    
T  41452828 aaatttaaagttttgtacaatattttgccaaacaacttttaacttaaaaataactttagaact 41452890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 35 - 97
Target Start/End: Original strand, 45474735 - 45474797
Alignment:
Q  35 aaattcaaagttttgtataatattttgtcaaacaacttttaacttaaaaataacttcagaact 97  Q
    ||||||||||||||||| ||||||||| ||||||||||||||||||||||||| || ||||||    
T  45474735 aaattcaaagttttgtacaatattttgccaaacaacttttaacttaaaaataaatttagaact 45474797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 31 - 97
Target Start/End: Original strand, 1117987 - 1118055
Alignment:
Q  31 taataaattcaaagttt--tgtataatattttgtcaaacaacttttaacttaaaaataacttcagaact 97  Q
    ||||||||||||||||   |||| |||||||||||||||||||||||||||||||||||||| ||||||    
T  1117987 taataaattcaaagttacatgtacaatattttgtcaaacaacttttaacttaaaaataactttagaact 1118055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 31 - 95
Target Start/End: Original strand, 4631217 - 4631281
Alignment:
Q  31 taataaattcaaagttttgtataatattttgtcaaacaacttttaacttaaaaataacttcagaa 95  Q
    ||||||||||||||||||||| ||||||||| |||||| ||||||||| ||||||||||| ||||    
T  4631217 taataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaa 4631281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 35 - 90
Target Start/End: Complemental strand, 17032875 - 17032820
Alignment:
Q  35 aaattcaaagttttgtataatattttgtcaaacaacttttaacttaaaaataactt 90  Q
    |||||| |||||||||| ||||||||| ||||||||||||||||||||||||||||    
T  17032875 aaattccaagttttgtacaatattttgccaaacaacttttaacttaaaaataactt 17032820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 31 - 97
Target Start/End: Complemental strand, 668360 - 668294
Alignment:
Q  31 taataaattcaaagttttgtataatattttgtcaaacaacttttaacttaaaaataacttcagaact 97  Q
    ||||||||||||| ||||||  ||||||||| |||||||||||||| ||||||||||||| ||||||    
T  668360 taataaattcaaaattttgtgcaatattttgccaaacaacttttaatttaaaaataactttagaact 668294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 31 - 97
Target Start/End: Original strand, 8683668 - 8683734
Alignment:
Q  31 taataaattcaaagttttgtataatattttgtcaaacaacttttaacttaaaaataacttcagaact 97  Q
    ||||||||||||||||||||| ||| ||||| |||||| ||||||||| ||||||||||| ||||||    
T  8683668 taataaattcaaagttttgtacaattttttgccaaacagcttttaactcaaaaataactttagaact 8683734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 32 - 89
Target Start/End: Original strand, 37522706 - 37522763
Alignment:
Q  32 aataaattcaaagttttgtataatattttgtcaaacaacttttaacttaaaaataact 89  Q
    |||||| ||||| ||||||| || |||||| ||||||| |||||||||||||||||||    
T  37522706 aataaaatcaaaattttgtacaacattttgccaaacaaattttaacttaaaaataact 37522763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 53 - 97
Target Start/End: Complemental strand, 20313292 - 20313248
Alignment:
Q  53 aatattttgtcaaacaacttttaacttaaaaataacttcagaact 97  Q
    ||||||||| |||||| ||||||||| ||||||||||| ||||||    
T  20313292 aatattttgccaaacagcttttaactcaaaaataactttagaact 20313248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 55; Significance: 1e-22; HSPs: 53)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 31 - 97
Target Start/End: Complemental strand, 24473617 - 24473551
Alignment:
Q  31 taataaattcaaagttttgtataatattttgtcaaacaacttttaacttaaaaataacttcagaact 97  Q
    ||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||| ||||||    
T  24473617 taataaattcaaagttttgtacaatattttgccaaacaacttttaacttaaaaataactttagaact 24473551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 31 - 97
Target Start/End: Complemental strand, 43119180 - 43119114
Alignment:
Q  31 taataaattcaaagttttgtataatattttgtcaaacaacttttaacttaaaaataacttcagaact 97  Q
    ||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||| ||||||    
T  43119180 taataaattcaaagttttgtacaatattttgccaaacaacttttaacttaaaaataactttagaact 43119114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 31 - 97
Target Start/End: Complemental strand, 11754294 - 11754228
Alignment:
Q  31 taataaattcaaagttttgtataatattttgtcaaacaacttttaacttaaaaataacttcagaact 97  Q
    ||||||||||||||||||||| |||||||||||||||| ||||||||| ||||||||||| ||||||    
T  11754294 taataaattcaaagttttgtacaatattttgtcaaacagcttttaactcaaaaataactttagaact 11754228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 31 - 97
Target Start/End: Complemental strand, 33818160 - 33818094
Alignment:
Q  31 taataaattcaaagttttgtataatattttgtcaaacaacttttaacttaaaaataacttcagaact 97  Q
    ||||||||||||||||||||| |||||||||||||||| ||||||||| ||||||||||| ||||||    
T  33818160 taataaattcaaagttttgtacaatattttgtcaaacagcttttaactcaaaaataactttagaact 33818094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 31 - 97
Target Start/End: Complemental strand, 33877628 - 33877562
Alignment:
Q  31 taataaattcaaagttttgtataatattttgtcaaacaacttttaacttaaaaataacttcagaact 97  Q
    ||||||||||||||||||||| |||||||||||||||| ||||||||| ||||||||||| ||||||    
T  33877628 taataaattcaaagttttgtacaatattttgtcaaacagcttttaactcaaaaataactttagaact 33877562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 31 - 89
Target Start/End: Original strand, 34652283 - 34652341
Alignment:
Q  31 taataaattcaaagttttgtataatattttgtcaaacaacttttaacttaaaaataact 89  Q
    ||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||    
T  34652283 taataaattcaaaattttgtacaatattttgtcaaacaacttttaacttaaaaataact 34652341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 31 - 97
Target Start/End: Original strand, 38802314 - 38802380
Alignment:
Q  31 taataaattcaaagttttgtataatattttgtcaaacaacttttaacttaaaaataacttcagaact 97  Q
    ||||||||||||||||||||||||||||||| |||||| ||||||||| ||||||||||| ||||||    
T  38802314 taataaattcaaagttttgtataatattttgccaaacagcttttaactcaaaaataactttagaact 38802380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 31 - 97
Target Start/End: Complemental strand, 39879206 - 39879140
Alignment:
Q  31 taataaattcaaagttttgtataatattttgtcaaacaacttttaacttaaaaataacttcagaact 97  Q
    |||||||||||| |||||||| ||||||||| |||||||||||||||||||||||||||| ||||||    
T  39879206 taataaattcaatgttttgtaaaatattttgccaaacaacttttaacttaaaaataactttagaact 39879140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 31 - 96
Target Start/End: Complemental strand, 36952779 - 36952714
Alignment:
Q  31 taataaattcaaagttttgtataatattttgtcaaacaacttttaacttaaaaataacttcagaac 96  Q
    ||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||| || |||||    
T  36952779 taataaattcaaagttttgtacaatattttgccaaacaacttttaacttaaaaataaatttagaac 36952714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 31 - 87
Target Start/End: Complemental strand, 31638481 - 31638425
Alignment:
Q  31 taataaattcaaagttttgtataatattttgtcaaacaacttttaacttaaaaataa 87  Q
    |||| |||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  31638481 taattaattcaaagttttgtataatattttgccaaacaacttttaacttaaaaataa 31638425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 31 - 90
Target Start/End: Complemental strand, 46040552 - 46040493
Alignment:
Q  31 taataaattcaaagttttgtataatattttgtcaaacaacttttaacttaaaaataactt 90  Q
    ||||||||||||| ||||||| ||||||||| ||||||||||||||||||||||||||||    
T  46040552 taataaattcaaaattttgtacaatattttgccaaacaacttttaacttaaaaataactt 46040493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 31 - 97
Target Start/End: Original strand, 11583165 - 11583231
Alignment:
Q  31 taataaattcaaagttttgtataatattttgtcaaacaacttttaacttaaaaataacttcagaact 97  Q
    ||||||||||||||||||||| ||||||||| |||||| ||||||||| ||||||||||| ||||||    
T  11583165 taataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 11583231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 31 - 97
Target Start/End: Original strand, 17585524 - 17585590
Alignment:
Q  31 taataaattcaaagttttgtataatattttgtcaaacaacttttaacttaaaaataacttcagaact 97  Q
    ||||||||||||||||||||| ||||||||| |||||| ||||||||| ||||||||||| ||||||    
T  17585524 taataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 17585590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 31 - 97
Target Start/End: Complemental strand, 25659876 - 25659810
Alignment:
Q  31 taataaattcaaagttttgtataatattttgtcaaacaacttttaacttaaaaataacttcagaact 97  Q
    ||||||||||||||||||||| ||||||||| |||||| ||||||||| ||||||||||| ||||||    
T  25659876 taataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 25659810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 31 - 97
Target Start/End: Complemental strand, 33373886 - 33373820
Alignment:
Q  31 taataaattcaaagttttgtataatattttgtcaaacaacttttaacttaaaaataacttcagaact 97  Q
    ||||||||||||||||||||| ||||||||| |||||| ||||||||| ||||||||||| ||||||    
T  33373886 taataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 33373820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 31 - 97
Target Start/End: Original strand, 33642619 - 33642685
Alignment:
Q  31 taataaattcaaagttttgtataatattttgtcaaacaacttttaacttaaaaataacttcagaact 97  Q
    ||||||||||||||||||||| ||||||||| |||||| ||||||||| ||||||||||| ||||||    
T  33642619 taataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 33642685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 31 - 97
Target Start/End: Complemental strand, 33895283 - 33895217
Alignment:
Q  31 taataaattcaaagttttgtataatattttgtcaaacaacttttaacttaaaaataacttcagaact 97  Q
    ||||||||||||||||||||| ||||||||| |||||| ||||||||| ||||||||||| ||||||    
T  33895283 taataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 33895217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 31 - 97
Target Start/End: Complemental strand, 39327109 - 39327043
Alignment:
Q  31 taataaattcaaagttttgtataatattttgtcaaacaacttttaacttaaaaataacttcagaact 97  Q
    ||||||||||||||||||||| ||||||||| |||||| ||||||||| ||||||||||| ||||||    
T  39327109 taataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 39327043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 31 - 97
Target Start/End: Complemental strand, 41901766 - 41901700
Alignment:
Q  31 taataaattcaaagttttgtataatattttgtcaaacaacttttaacttaaaaataacttcagaact 97  Q
    ||||||||||||||||||||| ||||||||| |||||| ||||||||| ||||||||||| ||||||    
T  41901766 taataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 41901700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 35 - 97
Target Start/End: Original strand, 43123051 - 43123113
Alignment:
Q  35 aaattcaaagttttgtataatattttgtcaaacaacttttaacttaaaaataacttcagaact 97  Q
    ||||||||||||||||| ||||||||| |||||| ||||||||||||||||||||| ||||||    
T  43123051 aaattcaaagttttgtacaatattttgccaaacagcttttaacttaaaaataactttagaact 43123113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 31 - 97
Target Start/End: Original strand, 45104189 - 45104255
Alignment:
Q  31 taataaattcaaagttttgtataatattttgtcaaacaacttttaacttaaaaataacttcagaact 97  Q
    ||||||||||||||||||||| ||||||||| |||||| ||||||||| ||||||||||| ||||||    
T  45104189 taataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 45104255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 31 - 97
Target Start/End: Complemental strand, 46588157 - 46588091
Alignment:
Q  31 taataaattcaaagttttgtataatattttgtcaaacaacttttaacttaaaaataacttcagaact 97  Q
    |||||||||||||||||| |||||||||||| |||||| ||||||||| ||||||||||| ||||||    
T  46588157 taataaattcaaagttttatataatattttgccaaacagcttttaactcaaaaataactttagaact 46588091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 31 - 97
Target Start/End: Complemental strand, 47037197 - 47037131
Alignment:
Q  31 taataaattcaaagttttgtataatattttgtcaaacaacttttaacttaaaaataacttcagaact 97  Q
    ||||||||||||||||||||| ||||||||| |||||| ||||||||| ||||||||||| ||||||    
T  47037197 taataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 47037131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 31 - 96
Target Start/End: Complemental strand, 43120845 - 43120780
Alignment:
Q  31 taataaattcaaagttttgtataatattttgtcaaacaacttttaacttaaaaataacttcagaac 96  Q
    ||||||||||||||||||||| ||||||||| |||||| ||||||||| ||||||||||| |||||    
T  43120845 taataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaac 43120780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 35 - 95
Target Start/End: Original strand, 34078295 - 34078355
Alignment:
Q  35 aaattcaaagttttgtataatattttgtcaaacaacttttaacttaaaaataacttcagaa 95  Q
    ||||||||||||||||| ||||||||| |||||||||||||| ||||||||||||| ||||    
T  34078295 aaattcaaagttttgtacaatattttgccaaacaacttttaatttaaaaataactttagaa 34078355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 39 - 95
Target Start/End: Complemental strand, 39729262 - 39729206
Alignment:
Q  39 tcaaagttttgtataatattttgtcaaacaacttttaacttaaaaataacttcagaa 95  Q
    ||||||||||||| |||||||||| ||||||||||||||||||||||||||| ||||    
T  39729262 tcaaagttttgtacaatattttgtgaaacaacttttaacttaaaaataactttagaa 39729206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 31 - 90
Target Start/End: Complemental strand, 40432269 - 40432210
Alignment:
Q  31 taataaattcaaagttttgtataatattttgtcaaacaacttttaacttaaaaataactt 90  Q
    ||||||||||||||||||||| ||||||||| |||||| ||||||||| |||||||||||    
T  40432269 taataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactt 40432210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 31 - 97
Target Start/End: Complemental strand, 1322591 - 1322525
Alignment:
Q  31 taataaattcaaagttttgtataatattttgtcaaacaacttttaacttaaaaataacttcagaact 97  Q
    |||||||||||| |||||||| ||||||||  |||||||||||||| ||||||||||||| ||||||    
T  1322591 taataaattcaatgttttgtacaatattttaccaaacaacttttaatttaaaaataactttagaact 1322525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 31 - 97
Target Start/End: Original strand, 3265125 - 3265191
Alignment:
Q  31 taataaattcaaagttttgtataatattttgtcaaacaacttttaacttaaaaataacttcagaact 97  Q
    |||||||||||||||||| || ||||||||| |||||| ||||||||| ||||||||||| ||||||    
T  3265125 taataaattcaaagttttatacaatattttgccaaacagcttttaactcaaaaataactttagaact 3265191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 31 - 97
Target Start/End: Original strand, 7833554 - 7833620
Alignment:
Q  31 taataaattcaaagttttgtataatattttgtcaaacaacttttaacttaaaaataacttcagaact 97  Q
    ||||||||||||||||||||| ||||||||| ||||||  |||||||| ||||||||||| ||||||    
T  7833554 taataaattcaaagttttgtacaatattttgccaaacagtttttaactcaaaaataactttagaact 7833620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 31 - 97
Target Start/End: Original strand, 9574870 - 9574936
Alignment:
Q  31 taataaattcaaagttttgtataatattttgtcaaacaacttttaacttaaaaataacttcagaact 97  Q
    ||||||||||||||||||||| ||||||||| | |||| ||||||||| ||||||||||| ||||||    
T  9574870 taataaattcaaagttttgtacaatattttgccgaacagcttttaactcaaaaataactttagaact 9574936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 31 - 97
Target Start/End: Complemental strand, 14487390 - 14487324
Alignment:
Q  31 taataaattcaaagttttgtataatattttgtcaaacaacttttaacttaaaaataacttcagaact 97  Q
    ||||||||||||||||||||| ||||||||  |||||| ||||||||| ||||||||||| ||||||    
T  14487390 taataaattcaaagttttgtacaatatttttccaaacagcttttaactcaaaaataactttagaact 14487324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 31 - 97
Target Start/End: Original strand, 17249044 - 17249110
Alignment:
Q  31 taataaattcaaagttttgtataatattttgtcaaacaacttttaacttaaaaataacttcagaact 97  Q
    ||||||| ||||||||||||| ||||||||| |||||| |||||| |||||||||||||| ||||||    
T  17249044 taataaaatcaaagttttgtacaatattttgccaaacagcttttagcttaaaaataactttagaact 17249110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 31 - 97
Target Start/End: Complemental strand, 33831991 - 33831925
Alignment:
Q  31 taataaattcaaagttttgtataatattttgtcaaacaacttttaacttaaaaataacttcagaact 97  Q
    ||||||||||||||| ||||| ||||||||| |||||| ||||||||| ||||||||||| ||||||    
T  33831991 taataaattcaaagtgttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 33831925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 31 - 97
Target Start/End: Complemental strand, 33894153 - 33894087
Alignment:
Q  31 taataaattcaaagttttgtataatattttgtcaaacaacttttaacttaaaaataacttcagaact 97  Q
    ||||||||||||||| ||||| ||||||||| |||||| ||||||||| ||||||||||| ||||||    
T  33894153 taataaattcaaagtgttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 33894087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 31 - 97
Target Start/End: Complemental strand, 36165587 - 36165521
Alignment:
Q  31 taataaattcaaagttttgtataatattttgtcaaacaacttttaacttaaaaataacttcagaact 97  Q
    ||||||||||||||||||||| ||||||||| |||| | ||||||||| ||||||||||| ||||||    
T  36165587 taataaattcaaagttttgtacaatattttgccaaaaagcttttaactcaaaaataactttagaact 36165521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 39 - 95
Target Start/End: Complemental strand, 17366411 - 17366355
Alignment:
Q  39 tcaaagttttgtataatattttgtcaaacaacttttaacttaaaaataacttcagaa 95  Q
    ||||||||||||| ||||||||  |||||||||||||||||||||||||||| ||||    
T  17366411 tcaaagttttgtacaatattttaccaaacaacttttaacttaaaaataactttagaa 17366355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 38 - 97
Target Start/End: Original strand, 16097358 - 16097417
Alignment:
Q  38 ttcaaagttttgtataatattttgtcaaacaacttttaacttaaaaataacttcagaact 97  Q
    |||||||||||||| ||||||||| |||||| |||||||||||||||||| || ||||||    
T  16097358 ttcaaagttttgtacaatattttgccaaacagcttttaacttaaaaataattttagaact 16097417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 31 - 86
Target Start/End: Original strand, 18091283 - 18091337
Alignment:
Q  31 taataaattcaaagttttgtataatattttgtcaaacaacttttaacttaaaaata 86  Q
    ||||||||||||||||| ||| ||||||||| ||||||||||||||||||||||||    
T  18091283 taataaattcaaagttt-gtacaatattttgccaaacaacttttaacttaaaaata 18091337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 32 - 90
Target Start/End: Complemental strand, 23730359 - 23730302
Alignment:
Q  32 aataaattcaaagttttgtataatattttgtcaaacaacttttaacttaaaaataactt 90  Q
    ||||| |||||||||| ||| ||||||||| ||||||||||||||||||||||||||||    
T  23730359 aataatttcaaagttt-gtacaatattttgccaaacaacttttaacttaaaaataactt 23730302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 41 - 95
Target Start/End: Original strand, 33932934 - 33932988
Alignment:
Q  41 aaagttttgtataatattttgtcaaacaacttttaacttaaaaataacttcagaa 95  Q
    |||||||||||| |||||||| |||||||||||||| ||||||||||||| ||||    
T  33932934 aaagttttgtatgatattttgccaaacaacttttaatttaaaaataactttagaa 33932988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 35 - 88
Target Start/End: Original strand, 43124366 - 43124419
Alignment:
Q  35 aaattcaaagttttgtataatattttgtcaaacaacttttaacttaaaaataac 88  Q
    ||||||||| |||| |||||||||||| ||||||| ||||||||||||||||||    
T  43124366 aaattcaaatttttatataatattttgccaaacaaattttaacttaaaaataac 43124419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 45 - 97
Target Start/End: Complemental strand, 7308383 - 7308331
Alignment:
Q  45 ttttgtataatattttgtcaaacaacttttaacttaaaaataacttcagaact 97  Q
    ||||||| ||||||||| |||||||||||||||||||||||||| | ||||||    
T  7308383 ttttgtacaatattttgccaaacaacttttaacttaaaaataacattagaact 7308331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 31 - 86
Target Start/End: Complemental strand, 11606533 - 11606478
Alignment:
Q  31 taataaattcaaagttttgtataatattttgtcaaacaacttttaacttaaaaata 86  Q
    ||||||||| ||||||||||| ||||||||| |||||||||||||| ||| |||||    
T  11606533 taataaatttaaagttttgtacaatattttgccaaacaacttttaatttagaaata 11606478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 35 - 86
Target Start/End: Original strand, 49223163 - 49223213
Alignment:
Q  35 aaattcaaagttttgtataatattttgtcaaacaacttttaacttaaaaata 86  Q
    ||||||||||||| ||| |||||||||||||||||| |||||||||||||||    
T  49223163 aaattcaaagttt-gtacaatattttgtcaaacaacatttaacttaaaaata 49223213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 35 - 97
Target Start/End: Original strand, 49571214 - 49571276
Alignment:
Q  35 aaattcaaagttttgtataatattttgtcaaacaacttttaacttaaaaataacttcagaact 97  Q
    ||||| ||||||||||| |||||| |||||||||| || |||| |||||||||||| ||||||    
T  49571214 aaatttaaagttttgtacaatattgtgtcaaacaaattataacataaaaataactttagaact 49571276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 37 - 86
Target Start/End: Original strand, 15845769 - 15845817
Alignment:
Q  37 attcaaagttttgtataatattttgtcaaacaacttttaacttaaaaata 86  Q
    |||||||| |||||||||||||||| |||||||| |||||||||||||||    
T  15845769 attcaaagctttgtataatattttgccaaacaac-tttaacttaaaaata 15845817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 54 - 97
Target Start/End: Complemental strand, 31215907 - 31215864
Alignment:
Q  54 atattttgtcaaacaacttttaacttaaaaataacttcagaact 97  Q
    |||||||| |||||||||||||||| ||||||||||| ||||||    
T  31215907 atattttgccaaacaacttttaactcaaaaataactttagaact 31215864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 54 - 97
Target Start/End: Complemental strand, 31221662 - 31221619
Alignment:
Q  54 atattttgtcaaacaacttttaacttaaaaataacttcagaact 97  Q
    |||||||| |||||||||||||||| ||||||||||| ||||||    
T  31221662 atattttgccaaacaacttttaactcaaaaataactttagaact 31221619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 37 - 84
Target Start/End: Complemental strand, 44065502 - 44065455
Alignment:
Q  37 attcaaagttttgtataatattttgtcaaacaacttttaacttaaaaa 84  Q
    |||||||| |||||| |||||| || ||||||||||||||||||||||    
T  44065502 attcaaagctttgtacaatattgtgccaaacaacttttaacttaaaaa 44065455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 46 - 83
Target Start/End: Complemental strand, 16033142 - 16033105
Alignment:
Q  46 tttgtataatattttgtcaaacaacttttaacttaaaa 83  Q
    |||||| |||||||||||||||||| ||||||||||||    
T  16033142 tttgtacaatattttgtcaaacaacatttaacttaaaa 16033105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 46 - 90
Target Start/End: Original strand, 17670009 - 17670053
Alignment:
Q  46 tttgtataatattttgtcaaacaacttttaacttaaaaataactt 90  Q
    |||||| ||||||||| |||||||| |||||||||||| ||||||    
T  17670009 tttgtacaatattttgccaaacaacatttaacttaaaagtaactt 17670053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 46 - 86
Target Start/End: Complemental strand, 28568805 - 28568765
Alignment:
Q  46 tttgtataatattttgtcaaacaacttttaacttaaaaata 86  Q
    |||||| ||||||||| |||||||| |||||||||||||||    
T  28568805 tttgtacaatattttgccaaacaacatttaacttaaaaata 28568765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0166 (Bit Score: 51; Significance: 2e-20; HSPs: 1)
Name: scaffold0166
Description:

Target: scaffold0166; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 31 - 97
Target Start/End: Original strand, 1482 - 1548
Alignment:
Q  31 taataaattcaaagttttgtataatattttgtcaaacaacttttaacttaaaaataacttcagaact 97  Q
    ||||||||||||||||||||||||||||||| |||||| ||||||||| ||||||||||| ||||||    
T  1482 taataaattcaaagttttgtataatattttgccaaacagcttttaactcaaaaataactttagaact 1548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0768 (Bit Score: 49; Significance: 4e-19; HSPs: 1)
Name: scaffold0768
Description:

Target: scaffold0768; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 31 - 87
Target Start/End: Complemental strand, 6369 - 6313
Alignment:
Q  31 taataaattcaaagttttgtataatattttgtcaaacaacttttaacttaaaaataa 87  Q
    ||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||    
T  6369 taataaattcaaagttttgtacaatattttgccaaacaacttttaacttaaaaataa 6313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 49; Significance: 4e-19; HSPs: 2)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 31 - 95
Target Start/End: Complemental strand, 90527 - 90463
Alignment:
Q  31 taataaattcaaagttttgtataatattttgtcaaacaacttttaacttaaaaataacttcagaa 95  Q
    ||||||||||||||||||||| ||||||||| |||||| ||||||||||||||||||||| ||||    
T  90527 taataaattcaaagttttgtacaatattttgccaaacagcttttaacttaaaaataactttagaa 90463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 39 - 95
Target Start/End: Complemental strand, 110585 - 110529
Alignment:
Q  39 tcaaagttttgtataatattttgtcaaacaacttttaacttaaaaataacttcagaa 95  Q
    |||||||||  || |||||||||  ||||||||||||||||||||||||||| ||||    
T  110585 tcaaagtttcttacaatattttgctaaacaacttttaacttaaaaataactttagaa 110529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0197 (Bit Score: 47; Significance: 6e-18; HSPs: 1)
Name: scaffold0197
Description:

Target: scaffold0197; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 31 - 97
Target Start/End: Original strand, 25716 - 25782
Alignment:
Q  31 taataaattcaaagttttgtataatattttgtcaaacaacttttaacttaaaaataacttcagaact 97  Q
    ||||||||||||||||||||| ||||||||| |||||| ||||||||| ||||||||||| ||||||    
T  25716 taataaattcaaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 25782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0481 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 2)
Name: scaffold0481
Description:

Target: scaffold0481; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 31 - 97
Target Start/End: Complemental strand, 4578 - 4512
Alignment:
Q  31 taataaattcaaagttttgtataatattttgtcaaacaacttttaacttaaaaataacttcagaact 97  Q
    ||||||||||||||||||||| ||||||| | |||||| ||||||||| ||||||||||| ||||||    
T  4578 taataaattcaaagttttgtacaatatttggccaaacagcttttaactcaaaaataactttagaact 4512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0481; HSP #2
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 31 - 97
Target Start/End: Original strand, 7456 - 7522
Alignment:
Q  31 taataaattcaaagttttgtataatattttgtcaaacaacttttaacttaaaaataacttcagaact 97  Q
    |||||||||| |||||||||| ||||||||| |||||| ||||||||| ||||||||||| ||||||    
T  7456 taataaattctaagttttgtacaatattttgccaaacagcttttaactcaaaaataactttagaact 7522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0178 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0178
Description:

Target: scaffold0178; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 31 - 97
Target Start/End: Complemental strand, 7358 - 7292
Alignment:
Q  31 taataaattcaaagttttgtataatattttgtcaaacaacttttaacttaaaaataacttcagaact 97  Q
    ||||||||||||||||||||| ||||||||| |||| | ||||||||| ||||||||||| ||||||    
T  7358 taataaattcaaagttttgtacaatattttgccaaatagcttttaactcaaaaataactttagaact 7292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0078 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0078
Description:

Target: scaffold0078; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 37 - 90
Target Start/End: Complemental strand, 5793 - 5739
Alignment:
Q  37 attcaaagttttgtataatattttgtcaaacaacttttaacttaa-aaataactt 90  Q
    ||||||||||||||| ||||| ||||||||||||||||||||||| |||||||||    
T  5793 attcaaagttttgtacaatatcttgtcaaacaacttttaacttaataaataactt 5739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0318 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0318
Description:

Target: scaffold0318; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 42 - 90
Target Start/End: Original strand, 1072 - 1120
Alignment:
Q  42 aagttttgtataatattttgtcaaacaacttttaacttaaaaataactt 90  Q
    |||||||| | ||||||||| ||||||||||||||||||||||||||||    
T  1072 aagttttgaaaaatattttgccaaacaacttttaacttaaaaataactt 1120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 35 - 95
Target Start/End: Complemental strand, 138091 - 138031
Alignment:
Q  35 aaattcaaagttttgtataatattttgtcaaacaacttttaacttaaaaataacttcagaa 95  Q
    ||||||||||| ||||  |||||||||  ||||||||||||||||||||||||||| ||||    
T  138091 aaattcaaagtcttgtgcaatattttgctaaacaacttttaacttaaaaataactttagaa 138031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 42 - 90
Target Start/End: Original strand, 229101 - 229149
Alignment:
Q  42 aagttttgtataatattttgtcaaacaacttttaacttaaaaataactt 90  Q
    |||||||||| ||||||||  ||||||||||||||||||||||||||||    
T  229101 aagttttgtacaatattttaccaaacaacttttaacttaaaaataactt 229149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 31 - 97
Target Start/End: Original strand, 132665 - 132730
Alignment:
Q  31 taataaattcaaagttttgtataatattttgtcaaacaacttttaacttaaaaataacttcagaact 97  Q
    ||||||||| |||||||  || ||||||||| |||||||||||||| ||||||||||||| ||||||    
T  132665 taataaattgaaagttta-tacaatattttgccaaacaacttttaaattaaaaataactttagaact 132730  T

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Target: scaffold1793 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold1793
Description:

Target: scaffold1793; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 42 - 86
Target Start/End: Complemental strand, 322 - 278
Alignment:
Q  42 aagttttgtataatattttgtcaaacaacttttaacttaaaaata 86  Q
    |||||||||| |||||||||||||||| |||||||| | ||||||    
T  322 aagttttgtaaaatattttgtcaaacatcttttaaccttaaaata 278  T

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Target: scaffold0016 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 35 - 83
Target Start/End: Original strand, 99393 - 99440
Alignment:
Q  35 aaattcaaagttttgtataatattttgtcaaacaacttttaacttaaaa 83  Q
    ||||||||||||| ||| |||||||||||||||||  ||||||||||||    
T  99393 aaattcaaagttt-gtacaatattttgtcaaacaatatttaacttaaaa 99440  T

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Target: scaffold0010 (Bit Score: 29; Significance: 0.0000003; HSPs: 2)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 46 - 86
Target Start/End: Original strand, 50268 - 50308
Alignment:
Q  46 tttgtataatattttgtcaaacaacttttaacttaaaaata 86  Q
    |||||| |||||||||||||||||| ||||| |||||||||    
T  50268 tttgtacaatattttgtcaaacaacatttaatttaaaaata 50308  T

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Target: scaffold0010; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 46 - 86
Target Start/End: Original strand, 57801 - 57841
Alignment:
Q  46 tttgtataatattttgtcaaacaacttttaacttaaaaata 86  Q
    |||||| |||||||||||||||||| ||||| |||||||||    
T  57801 tttgtacaatattttgtcaaacaacatttaatttaaaaata 57841  T

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