View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF3306_1D_high_20 (Length: 252)
Name: NF3306_1D_high_20
Description: NF3306_1D
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3306_1D_high_20 |
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| [»] chr7 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 203; Significance: 1e-111; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 203; E-Value: 1e-111
Query Start/End: Original strand, 23 - 252
Target Start/End: Original strand, 47126637 - 47126869
Alignment:
| Q |
23 |
agttataaggatccagttaaactttaccttatattgtgttaaaacatatctctactataaagtaaaattcacgttactacaccaacgacattgaatgatt |
122 |
Q |
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| T |
47126637 |
agttataaggatccagttaaactttaccttatattgtgttaaaacatatctctactataaagtaaaattcacgttactacaccaacgacattgaatgatt |
47126736 |
T |
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| Q |
123 |
tgagctcaaattctactaatatggtcgtataactttatcaaatgataagaaatattttagaaaaatataatgacatt---tagtattctctaaaaatttc |
219 |
Q |
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| T |
47126737 |
tgagctcaaattctactaatatggtcgtataactttatcaaatgataagaaatattttagaaaaatttaatgacatttagtagtattctcttaaaattta |
47126836 |
T |
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| Q |
220 |
tcgatgtgcatataaagaaaataaaatccttgt |
252 |
Q |
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| T |
47126837 |
tcgatgtgcatataaagaaaataaaatcattgt |
47126869 |
T |
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