View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF3306_1D_low_21 (Length: 270)
Name: NF3306_1D_low_21
Description: NF3306_1D
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3306_1D_low_21 |
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Alignment Details
Target: chr7 (Bit Score: 256; Significance: 1e-142; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 256; E-Value: 1e-142
Query Start/End: Original strand, 1 - 264
Target Start/End: Original strand, 33759988 - 33760251
Alignment:
| Q |
1 |
tttgacttcctcttaaacgtgctcattaagttagcctaataggacctgaggtccacagtgtggagcacaatgagggcattgaattcaggcattggacctg |
100 |
Q |
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| T |
33759988 |
tttgacttcctcttaaacgtgctcattaagttagcctaataggacctgaggtccacagtgtggagcacaatgagggcattgaattcaggcattggacctg |
33760087 |
T |
|
| Q |
101 |
ttagcgaattgttccgaagatcaaggtgtgtgaggttagtgagagtgttgatcaagatagggattgtacctactagtgagcttgaaggaagcttgatggt |
200 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |
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| T |
33760088 |
ttagcgaattgttccgaagatcaaggtgtgtgaggttagtgagagtgttgatcaagatagggattgtacctactagtgagcttgaaggaagcttgctggt |
33760187 |
T |
|
| Q |
201 |
ggtaacacaattcgatcggcatgtgacactgttccatttgcagtggtgggtgttgtttgaccag |
264 |
Q |
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|||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
33760188 |
ggtaacgcaattcgatcggcatgtgacactgttccatttgcagtggtgggtgttgtttgaccag |
33760251 |
T |
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