View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF3306_high_17 (Length: 305)
Name: NF3306_high_17
Description: NF3306
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3306_high_17 |
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Alignment Details
Target: chr7 (Bit Score: 260; Significance: 1e-145; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 260; E-Value: 1e-145
Query Start/End: Original strand, 22 - 292
Target Start/End: Original strand, 44347585 - 44347856
Alignment:
| Q |
22 |
taggataacttttgtctccaagatcttaaacatgcctaacaatctactattgacttattgttgcaaggagttaaaaaacaagttggaaagtaaataacac |
121 |
Q |
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| T |
44347585 |
taggataacttttgtctccaagatcttaaacatgcctaacaatctactattgacttattgttgcaaggagttaaaaaacaagttggaaagtaaataatac |
44347684 |
T |
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| Q |
122 |
agtgaaattaggcagaatgtgaaagatgtccacagtaaaacaata-tatagctacatcatggacctacattcacggtcacagtcacaaccggagtgtaat |
220 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
44347685 |
agtgaaattaggcagaatgtgaaagatgtccacagtaaaacaatattatagctacatcatggacctacattcacggtcacagtcacaaccggagtgtaat |
44347784 |
T |
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| Q |
221 |
tatttcattctaatttgccgagtggtgtaacgaacgacttcctttcaacccacaaagataactttttcgcct |
292 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
44347785 |
tatttcattctaatttgccgagtggtgtaacgaacgacttcctttcaacccacaaagataactttttcgcct |
44347856 |
T |
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