View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF3307_low_8 (Length: 530)

Name: NF3307_low_8
Description: NF3307
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF3307_low_8
NF3307_low_8
[»] chr2 (21 HSPs)
chr2 (350-515)||(2959689-2959854)
chr2 (1-140)||(39938168-39938307)
chr2 (1-135)||(3518911-3519045)
chr2 (1-135)||(23366792-23366926)
chr2 (137-281)||(2958372-2958517)
chr2 (1-140)||(1102501-1102640)
chr2 (11-135)||(37673887-37674011)
chr2 (1-135)||(12969879-12970013)
chr2 (1-110)||(1646317-1646424)
chr2 (1-61)||(22388275-22388335)
chr2 (1-79)||(14779838-14779914)
chr2 (23-90)||(35179097-35179164)
chr2 (85-135)||(34224378-34224428)
chr2 (1-90)||(18078104-18078193)
chr2 (1-87)||(32840312-32840401)
chr2 (1-90)||(19976380-19976468)
chr2 (1-80)||(39562027-39562104)
chr2 (1-128)||(1002870-1002997)
chr2 (1-64)||(24777741-24777804)
chr2 (1-47)||(4917853-4917899)
chr2 (208-281)||(803878-803951)
[»] chr7 (22 HSPs)
chr7 (1-135)||(10981511-10981645)
chr7 (1-135)||(27813814-27813948)
chr7 (1-140)||(40348958-40349097)
chr7 (1-135)||(36453264-36453398)
chr7 (1-135)||(47110454-47110586)
chr7 (1-131)||(25614493-25614621)
chr7 (2-90)||(3091565-3091653)
chr7 (5-90)||(7743541-7743625)
chr7 (1-78)||(27942179-27942256)
chr7 (9-80)||(16360442-16360511)
chr7 (1-88)||(16662146-16662231)
chr7 (1-88)||(17636506-17636591)
chr7 (85-135)||(25060133-25060183)
chr7 (85-135)||(2911548-2911598)
chr7 (207-281)||(34111806-34111880)
chr7 (1-88)||(37983206-37983289)
chr7 (1-80)||(3498894-3498973)
chr7 (209-281)||(33901310-33901382)
chr7 (97-132)||(25059456-25059491)
chr7 (4-47)||(28200298-28200341)
chr7 (211-277)||(32854151-32854217)
chr7 (211-281)||(40982018-40982088)
[»] chr6 (22 HSPs)
chr6 (1-135)||(1605582-1605716)
chr6 (1-135)||(29260195-29260329)
chr6 (1-131)||(30734623-30734753)
chr6 (1-135)||(8626485-8626619)
chr6 (1-132)||(13757214-13757345)
chr6 (1-135)||(7761304-7761436)
chr6 (1-135)||(15064834-15064968)
chr6 (6-123)||(31559881-31559998)
chr6 (1-123)||(8235639-8235761)
chr6 (1-135)||(4129438-4129564)
chr6 (1-135)||(17942446-17942582)
chr6 (23-132)||(30734772-30734879)
chr6 (1-87)||(21277574-21277659)
chr6 (208-279)||(28542019-28542090)
chr6 (8-90)||(3798151-3798233)
chr6 (5-87)||(11370629-11370711)
chr6 (85-135)||(19996715-19996765)
chr6 (1-89)||(14287038-14287125)
chr6 (97-135)||(19996325-19996363)
chr6 (1-41)||(30235447-30235487)
chr6 (1-88)||(26860819-26860902)
chr6 (47-80)||(33845469-33845502)
[»] chr4 (30 HSPs)
chr4 (1-135)||(25704654-25704788)
chr4 (6-135)||(21310428-21310557)
chr4 (1-131)||(24706387-24706517)
chr4 (1-135)||(12071564-12071698)
chr4 (1-135)||(14261047-14261181)
chr4 (1-131)||(22321407-22321537)
chr4 (1-135)||(34324722-34324857)
chr4 (1-135)||(40122625-40122759)
chr4 (1-131)||(44568844-44568974)
chr4 (1-135)||(21661675-21661809)
chr4 (1-135)||(21670439-21670573)
chr4 (1-132)||(20249153-20249283)
chr4 (1-131)||(50767871-50768001)
chr4 (1-135)||(31892241-31892371)
chr4 (23-108)||(1988065-1988150)
chr4 (1-113)||(19692748-19692860)
chr4 (1-113)||(19703333-19703445)
chr4 (1-90)||(20714488-20714577)
chr4 (5-88)||(6129092-6129175)
chr4 (1-87)||(32543532-32543617)
chr4 (9-132)||(26676714-26676837)
chr4 (210-281)||(31463270-31463341)
chr4 (15-78)||(34284171-34284234)
chr4 (1-90)||(48652268-48652356)
chr4 (208-280)||(51581431-51581503)
chr4 (1-66)||(21064834-21064897)
chr4 (207-281)||(55465436-55465510)
chr4 (1-70)||(18507404-18507472)
chr4 (85-123)||(19361662-19361700)
chr4 (97-131)||(19362189-19362223)
[»] chr1 (42 HSPs)
chr1 (1-135)||(23045419-23045553)
chr1 (6-135)||(284336-284465)
chr1 (1-135)||(321629-321763)
chr1 (1-135)||(40783797-40783931)
chr1 (1-135)||(24772045-24772179)
chr1 (1-131)||(47037992-47038120)
chr1 (1-135)||(27211104-27211238)
chr1 (1-127)||(23526251-23526377)
chr1 (1-131)||(46771644-46771774)
chr1 (1-118)||(33082765-33082882)
chr1 (1-123)||(52037262-52037382)
chr1 (1-88)||(1749357-1749444)
chr1 (1-90)||(31003926-31004012)
chr1 (1-135)||(51064893-51065030)
chr1 (10-87)||(1837978-1838053)
chr1 (1-90)||(3657125-3657212)
chr1 (1-90)||(52478016-52478103)
chr1 (1-88)||(27143151-27143239)
chr1 (85-135)||(3943063-3943113)
chr1 (85-135)||(9588673-9588723)
chr1 (1-79)||(18396754-18396832)
chr1 (85-135)||(41959081-41959131)
chr1 (10-79)||(7765072-7765141)
chr1 (85-131)||(13984991-13985037)
chr1 (1-90)||(34458863-34458950)
chr1 (9-90)||(40261419-40261501)
chr1 (97-135)||(44227851-44227889)
chr1 (1-70)||(31061594-31061662)
chr1 (13-78)||(40562733-40562797)
chr1 (97-141)||(3943763-3943807)
chr1 (209-277)||(7785121-7785189)
chr1 (97-135)||(41959809-41959847)
chr1 (96-133)||(44228239-44228276)
chr1 (208-248)||(14331931-14331971)
chr1 (72-124)||(40564241-40564293)
chr1 (55-90)||(14351954-14351989)
chr1 (1-70)||(24876633-24876699)
chr1 (97-135)||(9589631-9589669)
chr1 (209-246)||(16691390-16691427)
chr1 (5-41)||(33711192-33711228)
chr1 (237-281)||(39323465-39323509)
chr1 (198-246)||(43168237-43168285)
[»] chr8 (37 HSPs)
chr8 (1-142)||(11174363-11174504)
chr8 (1-133)||(2540071-2540203)
chr8 (1-135)||(40058443-40058577)
chr8 (6-135)||(3585454-3585583)
chr8 (6-135)||(11646470-11646599)
chr8 (1-135)||(43275539-43275671)
chr8 (1-135)||(37345574-37345708)
chr8 (1-140)||(7146911-7147050)
chr8 (6-135)||(36068083-36068212)
chr8 (1-131)||(30999663-30999791)
chr8 (1-135)||(40918871-40919003)
chr8 (1-135)||(27035000-27035133)
chr8 (1-135)||(20546429-20546561)
chr8 (5-133)||(28562426-28562555)
chr8 (1-131)||(35866621-35866751)
chr8 (1-80)||(13881094-13881174)
chr8 (1-90)||(28326797-28326883)
chr8 (209-281)||(40058167-40058239)
chr8 (85-135)||(8697898-8697948)
chr8 (85-135)||(41307961-41308011)
chr8 (85-135)||(45278701-45278751)
chr8 (5-133)||(28567924-28568052)
chr8 (5-133)||(28575517-28575645)
chr8 (1-90)||(37510314-37510403)
chr8 (85-133)||(10646597-10646645)
chr8 (208-280)||(36054957-36055029)
chr8 (213-280)||(6237530-6237597)
chr8 (85-135)||(40486453-40486503)
chr8 (2-79)||(10180998-10181074)
chr8 (1-80)||(39151464-39151542)
chr8 (210-253)||(42543061-42543104)
chr8 (1-88)||(30906828-30906917)
chr8 (224-280)||(40451972-40452028)
chr8 (207-246)||(39972126-39972165)
chr8 (97-132)||(41305768-41305803)
chr8 (209-247)||(8488605-8488643)
chr8 (97-129)||(45278021-45278053)
[»] scaffold1431 (1 HSPs)
scaffold1431 (1-132)||(39-170)
[»] chr5 (22 HSPs)
chr5 (1-135)||(12806993-12807127)
chr5 (1-135)||(25773652-25773786)
chr5 (1-135)||(30720632-30720766)
chr5 (1-135)||(10285197-10285331)
chr5 (1-131)||(40886750-40886880)
chr5 (1-131)||(36561239-36561369)
chr5 (1-135)||(37900764-37900898)
chr5 (1-127)||(7277562-7277688)
chr5 (1-92)||(25683368-25683459)
chr5 (18-135)||(16983261-16983380)
chr5 (1-135)||(734478-734611)
chr5 (1-90)||(30403101-30403191)
chr5 (13-88)||(23098386-23098461)
chr5 (1-135)||(39070886-39071020)
chr5 (1-133)||(11319564-11319696)
chr5 (96-141)||(15305223-15305268)
chr5 (1-78)||(1056422-1056498)
chr5 (1-79)||(16054173-16054249)
chr5 (206-280)||(19804486-19804560)
chr5 (97-135)||(15304825-15304863)
chr5 (210-251)||(6318586-6318627)
chr5 (30-90)||(11796499-11796559)
[»] chr3 (40 HSPs)
chr3 (1-135)||(13364846-13364980)
chr3 (1-135)||(198858-198992)
chr3 (1-135)||(46694250-46694384)
chr3 (6-135)||(19241813-19241942)
chr3 (1-135)||(36881285-36881417)
chr3 (1-131)||(3383083-3383213)
chr3 (1-135)||(23088071-23088205)
chr3 (9-135)||(29375141-29375267)
chr3 (1-135)||(43750140-43750274)
chr3 (34-131)||(32835129-32835226)
chr3 (17-123)||(13702784-13702890)
chr3 (60-135)||(27707363-27707438)
chr3 (1-86)||(19897067-19897152)
chr3 (3-79)||(37780996-37781072)
chr3 (85-135)||(12094585-12094635)
chr3 (85-135)||(19911512-19911562)
chr3 (53-135)||(37293440-37293522)
chr3 (85-135)||(44277455-44277505)
chr3 (1-115)||(54086577-54086690)
chr3 (10-87)||(1455297-1455374)
chr3 (53-121)||(48820444-48820512)
chr3 (1-128)||(18356007-18356134)
chr3 (69-135)||(48963159-48963223)
chr3 (97-135)||(19912174-19912212)
chr3 (1-79)||(24064283-24064361)
chr3 (85-135)||(38805248-38805298)
chr3 (97-135)||(38806341-38806379)
chr3 (209-281)||(32070710-32070779)
chr3 (210-279)||(32385582-32385651)
chr3 (4-47)||(6901655-6901698)
chr3 (9-72)||(17755221-17755284)
chr3 (9-72)||(19056541-19056604)
chr3 (97-132)||(44276781-44276816)
chr3 (10-88)||(44522491-44522567)
chr3 (97-135)||(12095423-12095461)
chr3 (1-79)||(52805166-52805244)
chr3 (237-281)||(6822805-6822847)
chr3 (208-281)||(9189283-9189356)
chr3 (9-50)||(27707136-27707177)
chr3 (85-129)||(4235760-4235803)
[»] scaffold0054 (1 HSPs)
scaffold0054 (1-135)||(45457-45591)
[»] scaffold1770 (1 HSPs)
scaffold1770 (1-135)||(173-299)
[»] scaffold0062 (1 HSPs)
scaffold0062 (1-123)||(405-525)
[»] scaffold0056 (1 HSPs)
scaffold0056 (1-88)||(70874-70961)
[»] scaffold0025 (1 HSPs)
scaffold0025 (1-72)||(65303-65375)
[»] scaffold0257 (2 HSPs)
scaffold0257 (85-135)||(23470-23520)
scaffold0257 (97-144)||(23872-23919)
[»] scaffold0169 (1 HSPs)
scaffold0169 (208-253)||(8983-9028)
[»] scaffold0014 (1 HSPs)
scaffold0014 (213-280)||(73501-73569)


Alignment Details
Target: chr2 (Bit Score: 154; Significance: 2e-81; HSPs: 21)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 154; E-Value: 2e-81
Query Start/End: Original strand, 350 - 515
Target Start/End: Original strand, 2959689 - 2959854
Alignment:
Q  350 catatcgaccaggatagactatagagcggaaaaacatcacaagacgtatatgatatgttgcagggtgatattcctgtaaaacaatattcctgtacaacag 449  Q
    |||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  2959689 catatcgaccaggatagactatagagtggaaaaacatcacaagacatatatgatatgttacagggtgatattcctgtaaaacaatattcctgtacaacag 2959788  T
Q  450 aggttgctgcacaattgtttgcgaaggcacagtgggagctttaagttcaggctgcacaaaataatt 515  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2959789 aggttgctgcacaattgtttgcgaaggcacagtgggagctttaagttcaggctgcacaaaataatt 2959854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 124; E-Value: 2e-63
Query Start/End: Original strand, 1 - 140
Target Start/End: Complemental strand, 39938307 - 39938168
Alignment:
Q  1 aatagaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtacaatt 100  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  39938307 aataaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtgcaatt 39938208  T
Q  101 tctccaaaatggacatgtattttgaaacggagggattact 140  Q
    |||||||||||| |||||||||||||||||||||| ||||    
T  39938207 tctccaaaatggtcatgtattttgaaacggagggagtact 39938168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 123; E-Value: 6e-63
Query Start/End: Original strand, 1 - 135
Target Start/End: Complemental strand, 3519045 - 3518911
Alignment:
Q  1 aatagaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtacaatt 100  Q
    |||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  3519045 aataaaatgaaataataaattattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtgcaatt 3518946  T
Q  101 tctccaaaatggacatgtattttgaaacggaggga 135  Q
    |||||||||||||||||||||||||||||||||||    
T  3518945 tctccaaaatggacatgtattttgaaacggaggga 3518911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 123; E-Value: 6e-63
Query Start/End: Original strand, 1 - 135
Target Start/End: Complemental strand, 23366926 - 23366792
Alignment:
Q  1 aatagaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtacaatt 100  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||    
T  23366926 aataaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcataaaaaataacaaaatttatttggtttcttggttagtgcaatt 23366827  T
Q  101 tctccaaaatggacatgtattttgaaacggaggga 135  Q
    |||||||||||||||||||||||||||||||||||    
T  23366826 tctccaaaatggacatgtattttgaaacggaggga 23366792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 137 - 281
Target Start/End: Original strand, 2958372 - 2958517
Alignment:
Q  137 tactagttaatttcctcaaaa-aacaatgccgctaattaattctctcaaaaaatgccactaattaatttattaaggaaaatgctaaatagtgcccttggg 235  Q
    |||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  2958372 tactagttaatttcctaaaaaaaacaatgccgctaattaattctctcaaaaaatgccactaattaatttattaaggaaaatgctaaatagtgtccttggg 2958471  T
Q  236 gcattggttaaaagaacaataatgaaaatattgtgttggaaagtgg 281  Q
     ||||| |||||||||||||||||||||||||||||||||||||||    
T  2958472 acattgtttaaaagaacaataatgaaaatattgtgttggaaagtgg 2958517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 120; E-Value: 4e-61
Query Start/End: Original strand, 1 - 140
Target Start/End: Complemental strand, 1102640 - 1102501
Alignment:
Q  1 aatagaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtacaatt 100  Q
    |||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||    
T  1102640 aataaaatgaaataataaatggttaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttactgcaatt 1102541  T
Q  101 tctccaaaatggacatgtattttgaaacggagggattact 140  Q
    ||||||||||||||||||||||||||||||||||| ||||    
T  1102540 tctccaaaatggacatgtattttgaaacggagggagtact 1102501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 113; E-Value: 6e-57
Query Start/End: Original strand, 11 - 135
Target Start/End: Original strand, 37673887 - 37674011
Alignment:
Q  11 aataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtacaatttctccaaaat 110  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||    
T  37673887 aataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttgatttcttggttagtgcaatttctccaaaat 37673986  T
Q  111 ggacatgtattttgaaacggaggga 135  Q
    | |||||||||||||||||||||||    
T  37673987 gaacatgtattttgaaacggaggga 37674011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 111; E-Value: 9e-56
Query Start/End: Original strand, 1 - 135
Target Start/End: Original strand, 12969879 - 12970013
Alignment:
Q  1 aatagaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtacaatt 100  Q
    |||||||| |||||||||||| ||||||||||||||||||| | ||||||| |||||||||||||||||||||||||||||||||||||||||| |||||    
T  12969879 aatagaataaaataataaatggttaagggtattatagaaaatatacacataatttcatcaaaaataacaaaatttatttggtttcttggttagtgcaatt 12969978  T
Q  101 tctccaaaatggacatgtattttgaaacggaggga 135  Q
    |||||||||||||||||||||||||||||||||||    
T  12969979 tctccaaaatggacatgtattttgaaacggaggga 12970013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 1646424 - 1646317
Alignment:
Q  1 aatagaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtacaatt 100  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||| |||||||||||  | |||||    
T  1646424 aataaaatgaaataataaatgattaagggtattatagaaaacacaca--tattttcatcaaaaataacaaaatttatttagtttcttggttgctgcaatt 1646327  T
Q  101 tctccaaaat 110  Q
    ||||||||||    
T  1646326 tctccaaaat 1646317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 22388275 - 22388335
Alignment:
Q  1 aatagaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaa 61  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22388275 aataaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaa 22388335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 14779914 - 14779838
Alignment:
Q  1 aatagaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttattt 79  Q
    |||| ||||||||||||||||| ||||  |||||||||||| ||||| ||| ||||||||||||||| |||||||||||    
T  14779914 aatataatgaaataataaatgagtaag--tattatagaaaaaacacaaataatttcatcaaaaataaaaaaatttattt 14779838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 23 - 90
Target Start/End: Original strand, 35179097 - 35179164
Alignment:
Q  23 ttaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggt 90  Q
    |||||| |||||||||||| ||||||| | |||||||||||||||||||||||||||  |||||||||    
T  35179097 ttaaggttattatagaaaaaacacacaaaatttcatcaaaaataacaaaatttatttcatttcttggt 35179164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 85 - 135
Target Start/End: Original strand, 34224378 - 34224428
Alignment:
Q  85 cttggttagtacaatttctccaaaatggacatgtattttgaaacggaggga 135  Q
    |||||||| | ||||||||||||||||||||||||||||||||||||||||    
T  34224378 cttggttactgcaatttctccaaaatggacatgtattttgaaacggaggga 34224428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 90
Target Start/End: Complemental strand, 18078193 - 18078104
Alignment:
Q  1 aatagaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggt 90  Q
    ||||||||||| ||||||||| | ||| |||||||||||||  |||| | |  ||||||||||||||||||||||||||| ||| |||||    
T  18078193 aatagaatgaattaataaatggtcaagagtattatagaaaatccacaaaaaaattcatcaaaaataacaaaatttatttgattttttggt 18078104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 32840312 - 32840401
Alignment:
Q  1 aatagaatgaaataataaatgattaagggtattatagaaa---acacacacatattttcatcaaaaataacaaaatttatttggtttctt 87  Q
    ||||||||||||||||||||   ||| |||||||||||||   | | ||||| | |||||||||||||||||||||||||||| ||||||    
T  32840312 aatagaatgaaataataaatcgataatggtattatagaaagaaaaaaacacagaatttcatcaaaaataacaaaatttatttgatttctt 32840401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 90
Target Start/End: Complemental strand, 19976468 - 19976380
Alignment:
Q  1 aatagaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggt 90  Q
    |||| ||| |||||||||||   |||||||||||||||||| | ||||||| ||| ||||||| || ||||||||||||| |||||||||    
T  19976468 aatataataaaataataaataggtaagggtattatagaaaaaa-acacataattttatcaaaagtaccaaaatttatttgatttcttggt 19976380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 39562027 - 39562104
Alignment:
Q  1 aatagaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttg 80  Q
    ||||||||  ||||||||||| ||||||||||||  ||||| ||| | ||| |||| |||||||||||||||||||||||    
T  39562027 aatagaatacaataataaatggttaagggtatta--gaaaaaacaaaaataatttcttcaaaaataacaaaatttatttg 39562104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 1 - 128
Target Start/End: Original strand, 1002870 - 1002997
Alignment:
Q  1 aatagaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtacaatt 100  Q
    |||||||||||||||||||||| ||| | |||| | ||||| ||| |   | ||||||||||||||| |||||||||||| |||||| ||  ||  |||     
T  1002870 aatagaatgaaataataaatgagtaatgttattgtcgaaaaaacaaaaggaatttcatcaaaaataataaaatttatttgatttcttagtatgtgtaata 1002969  T
Q  101 tctccaaaatggacatgtattttgaaac 128  Q
    ||  |||||  |||||||||||||||||    
T  1002970 tcctcaaaagcgacatgtattttgaaac 1002997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 24777804 - 24777741
Alignment:
Q  1 aatagaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaa 64  Q
    |||||||||||||||||||| | ||||||||||||| |||| ||||| | | |||||| |||||    
T  24777804 aatagaatgaaataataaataaataagggtattataaaaaaaacacaaagaatttcataaaaaa 24777741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 4917899 - 4917853
Alignment:
Q  1 aatagaatgaaataataaatgattaagggtattatagaaaacacaca 47  Q
    |||||||||||||||||||| ||||||  |||||||||||| |||||    
T  4917899 aatagaatgaaataataaataattaagattattatagaaaaaacaca 4917853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 208 - 281
Target Start/End: Original strand, 803878 - 803951
Alignment:
Q  208 aaggaaaatgctaaatagtgcccttggggcattggttaaaagaacaataatgaaaatattgtgttggaaagtgg 281  Q
    |||||||||| |||| |||||| |||| ||||||||||| ||||||  ||| |||||| | ||||| |||||||    
T  803878 aaggaaaatgttaaagagtgccattggagcattggttaagagaacataaataaaaataatttgttgaaaagtgg 803951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 127; Significance: 2e-65; HSPs: 22)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 1 - 135
Target Start/End: Complemental strand, 10981645 - 10981511
Alignment:
Q  1 aatagaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtacaatt 100  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  10981645 aataaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtgcaatt 10981546  T
Q  101 tctccaaaatggacatgtattttgaaacggaggga 135  Q
    |||||||||||||||||||||||||||||||||||    
T  10981545 tctccaaaatggacatgtattttgaaacggaggga 10981511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 123; E-Value: 6e-63
Query Start/End: Original strand, 1 - 135
Target Start/End: Complemental strand, 27813948 - 27813814
Alignment:
Q  1 aatagaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtacaatt 100  Q
    |||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  27813948 aataaaatgaaataataaatgattaagggtattatagaaaacacatacatattttcatcaaaaataacaaaatttatttggtttcttggttagtgcaatt 27813849  T
Q  101 tctccaaaatggacatgtattttgaaacggaggga 135  Q
    |||||||||||||||||||||||||||||||||||    
T  27813848 tctccaaaatggacatgtattttgaaacggaggga 27813814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 120; E-Value: 4e-61
Query Start/End: Original strand, 1 - 140
Target Start/End: Complemental strand, 40349097 - 40348958
Alignment:
Q  1 aatagaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtacaatt 100  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||    
T  40349097 aataaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttgatttcttggttagtgcaatt 40348998  T
Q  101 tctccaaaatggacatgtattttgaaacggagggattact 140  Q
    ||||||||||||||||||||||||||||||| ||| ||||    
T  40348997 tctccaaaatggacatgtattttgaaacggaaggagtact 40348958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 1 - 135
Target Start/End: Original strand, 36453264 - 36453398
Alignment:
Q  1 aatagaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtacaatt 100  Q
    |||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||    
T  36453264 aataaaatgaaataataaatgattaagggtattatagaaaaaacacacatattttcatcaaaaataataaaatttatttggtttcttggttagtgcaatt 36453363  T
Q  101 tctccaaaatggacatgtattttgaaacggaggga 135  Q
    |||||||||||||||||||||||||||||||||||    
T  36453364 tctccaaaatggacatgtattttgaaacggaggga 36453398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 1 - 135
Target Start/End: Complemental strand, 47110586 - 47110454
Alignment:
Q  1 aatagaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtacaatt 100  Q
    |||| ||| ||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||| |||||||||||||| |||||    
T  47110586 aataaaataaaataataaatgattaagggtattatagaaaacacaca--tattttcatcaaaaataacaaaatttattttgtttcttggttagtgcaatt 47110489  T
Q  101 tctccaaaatggacatgtattttgaaacggaggga 135  Q
    ||||||||||||||||||||||||||| |||||||    
T  47110488 tctccaaaatggacatgtattttgaaatggaggga 47110454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 1 - 131
Target Start/End: Original strand, 25614493 - 25614621
Alignment:
Q  1 aatagaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtacaatt 100  Q
    |||| ||||||||||||||||||||||||||||  |||||||||  |||||||||||||||||||||||||||||||||||||| ||||||||| |||||    
T  25614493 aataaaatgaaataataaatgattaagggtatttcagaaaacac--acatattttcatcaaaaataacaaaatttatttggttttttggttagtgcaatt 25614590  T
Q  101 tctccaaaatggacatgtattttgaaacgga 131  Q
    |||||||||||||||||||||||||||||||    
T  25614591 tctccaaaatggacatgtattttgaaacgga 25614621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 2 - 90
Target Start/End: Complemental strand, 3091653 - 3091565
Alignment:
Q  2 atagaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggt 90  Q
    |||||||||||||||||||| ||||||||||||||||||| ||||| | | |||||||||||||||||||||||||||| ||| |||||    
T  3091653 atagaatgaaataataaatggttaagggtattatagaaaaaacacaaagaatttcatcaaaaataacaaaatttatttgattttttggt 3091565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 5 - 90
Target Start/End: Original strand, 7743541 - 7743625
Alignment:
Q  5 gaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggt 90  Q
    |||||||||||||||| ||||| |||||||||||||  | ||||||| |||||||||||||||||||||||||||| | |||||||    
T  7743541 gaatgaaataataaataattaacggtattatagaaagaa-acacataatttcatcaaaaataacaaaatttatttgatatcttggt 7743625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 27942179 - 27942256
Alignment:
Q  1 aatagaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatt 78  Q
    ||||||||||||||||||||| |||| |||||||||||||| ||||||||| | |||| |||||||| ||||||||||    
T  27942179 aatagaatgaaataataaatggttaaaggtattatagaaaaaacacacataatctcattaaaaataaaaaaatttatt 27942256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 9 - 80
Target Start/End: Complemental strand, 16360511 - 16360442
Alignment:
Q  9 gaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttg 80  Q
    ||||||||||||| ||||||||||||||||||  | ||||| | ||||||||||||||||||||||||||||    
T  16360511 gaaataataaatggttaagggtattatagaaa--aaacacagaatttcatcaaaaataacaaaatttatttg 16360442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 16662231 - 16662146
Alignment:
Q  1 aatagaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttg 88  Q
    |||| ||| |||||||||||| |||||||||||||| |||| ||||| ||  |||||||||||||||||||||||||||  |||||||    
T  16662231 aatataataaaataataaatggttaagggtattataaaaaaaacacaaat--tttcatcaaaaataacaaaatttattttatttcttg 16662146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 17636591 - 17636506
Alignment:
Q  1 aatagaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttg 88  Q
    |||| ||| |||||||||||| |||||||||||||| |||| ||||| ||  |||||||||||||||||||||||||||  |||||||    
T  17636591 aatataataaaataataaatggttaagggtattataaaaaaaacacaaat--tttcatcaaaaataacaaaatttattttatttcttg 17636506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 85 - 135
Target Start/End: Original strand, 25060133 - 25060183
Alignment:
Q  85 cttggttagtacaatttctccaaaatggacatgtattttgaaacggaggga 135  Q
    |||||||| | ||||||||||||||||||||||||||||||||||||||||    
T  25060133 cttggttactgcaatttctccaaaatggacatgtattttgaaacggaggga 25060183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 85 - 135
Target Start/End: Original strand, 2911548 - 2911598
Alignment:
Q  85 cttggttagtacaatttctccaaaatggacatgtattttgaaacggaggga 135  Q
    |||||||| | |||||||||||||||||||||||||||||||| |||||||    
T  2911548 cttggttactgcaatttctccaaaatggacatgtattttgaaatggaggga 2911598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 207 - 281
Target Start/End: Original strand, 34111806 - 34111880
Alignment:
Q  207 taaggaaaatgctaaatagtgcccttggggcattggttaaaagaacaataatgaaaatattgtgttggaaagtgg 281  Q
    |||||||||||||||| | | || || ||||||||||||| |||||||||||  |||||||||||||| ||||||    
T  34111806 taaggaaaatgctaaacattacctttagggcattggttaagagaacaataatagaaatattgtgttgggaagtgg 34111880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 37983289 - 37983206
Alignment:
Q  1 aatagaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttg 88  Q
    |||| |||||||||||||||| |||| ||||||||| |||||| | |     |||||||||||||||||||||||||||| |||||||    
T  37983289 aatataatgaaataataaatggttaaaggtattataaaaaacataaaa----tttcatcaaaaataacaaaatttatttgatttcttg 37983206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 3498894 - 3498973
Alignment:
Q  1 aatagaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttg 80  Q
    |||| |||||||||||||||| ||||  ||||||||||||| | ||| | | |||||| ||||||||||||||| |||||    
T  3498894 aataaaatgaaataataaatggttaaaagtattatagaaaagatacaaaaaatttcataaaaaataacaaaattaatttg 3498973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 209 - 281
Target Start/End: Complemental strand, 33901382 - 33901310
Alignment:
Q  209 aggaaaatgctaaatagtgcccttggggcattggttaaaagaacaataatgaaaatattgtgttggaaagtgg 281  Q
    |||||||||||||| |||| | || || |||||||||| |||||||||||  ||||||| | |||||||||||    
T  33901382 aggaaaatgctaaagagtgtctttaggacattggttaatagaacaataatagaaatattatcttggaaagtgg 33901310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 97 - 132
Target Start/End: Complemental strand, 25059491 - 25059456
Alignment:
Q  97 aatttctccaaaatggacatgtattttgaaacggag 132  Q
    |||||||| |||||||||||||||||||||||||||    
T  25059491 aatttctctaaaatggacatgtattttgaaacggag 25059456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 4 - 47
Target Start/End: Complemental strand, 28200341 - 28200298
Alignment:
Q  4 agaatgaaataataaatgattaagggtattatagaaaacacaca 47  Q
    ||||| ||||||||||||||||||| |||||||||||| |||||    
T  28200341 agaataaaataataaatgattaaggatattatagaaaaaacaca 28200298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 211 - 277
Target Start/End: Complemental strand, 32854217 - 32854151
Alignment:
Q  211 gaaaatgctaaatagtgcccttggggcattggttaaaagaacaataatgaaaatattgtgttggaaa 277  Q
    ||||||| | || |||||||||  || ||||||||| ||||||||||| |||||||| |||||||||    
T  32854217 gaaaatgtttaagagtgcccttaaggtattggttaagagaacaataataaaaatattatgttggaaa 32854151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 211 - 281
Target Start/End: Original strand, 40982018 - 40982088
Alignment:
Q  211 gaaaatgctaaatagtgcccttggggcattggttaaaagaacaataatgaaaatattgtgttggaaagtgg 281  Q
    |||||||||||| ||||||||| |||||||||||||  ||| ||  ||  ||||||||||| |||||||||    
T  40982018 gaaaatgctaaagagtgcccttagggcattggttaagggaataaatatagaaatattgtgtcggaaagtgg 40982088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 127; Significance: 2e-65; HSPs: 22)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 1 - 135
Target Start/End: Complemental strand, 1605716 - 1605582
Alignment:
Q  1 aatagaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtacaatt 100  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  1605716 aataaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtgcaatt 1605617  T
Q  101 tctccaaaatggacatgtattttgaaacggaggga 135  Q
    |||||||||||||||||||||||||||||||||||    
T  1605616 tctccaaaatggacatgtattttgaaacggaggga 1605582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 1 - 135
Target Start/End: Complemental strand, 29260329 - 29260195
Alignment:
Q  1 aatagaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtacaatt 100  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  29260329 aataaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtgcaatt 29260230  T
Q  101 tctccaaaatggacatgtattttgaaacggaggga 135  Q
    |||||||||||||||||||||||||||||||||||    
T  29260229 tctccaaaatggacatgtattttgaaacggaggga 29260195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 123; E-Value: 6e-63
Query Start/End: Original strand, 1 - 131
Target Start/End: Original strand, 30734623 - 30734753
Alignment:
Q  1 aatagaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtacaatt 100  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  30734623 aataaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtgcaatt 30734722  T
Q  101 tctccaaaatggacatgtattttgaaacgga 131  Q
    |||||||||||||||||||||||||||||||    
T  30734723 tctccaaaatggacatgtattttgaaacgga 30734753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 1 - 135
Target Start/End: Complemental strand, 8626619 - 8626485
Alignment:
Q  1 aatagaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtacaatt 100  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||    
T  8626619 aataaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttaatgcaatt 8626520  T
Q  101 tctccaaaatggacatgtattttgaaacggaggga 135  Q
    ||| |||||||||||||||||||||||||||||||    
T  8626519 tcttcaaaatggacatgtattttgaaacggaggga 8626485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 116; E-Value: 9e-59
Query Start/End: Original strand, 1 - 132
Target Start/End: Complemental strand, 13757345 - 13757214
Alignment:
Q  1 aatagaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtacaatt 100  Q
    |||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||    
T  13757345 aataaaatgaaataataattgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtgtaatt 13757246  T
Q  101 tctccaaaatggacatgtattttgaaacggag 132  Q
    ||||||||||||||||||||||||||||||||    
T  13757245 tctccaaaatggacatgtattttgaaacggag 13757214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 1 - 135
Target Start/End: Complemental strand, 7761436 - 7761304
Alignment:
Q  1 aatagaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtacaatt 100  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||| |||||||||||||| |||||    
T  7761436 aataaaatgaaataataaatgattaagggtattatagaaaacacaca--tattttcatcaaaaataacaaaatttatttagtttcttggttagtgcaatt 7761339  T
Q  101 tctccaaaatggacatgtattttgaaacggaggga 135  Q
    |||||||||||||||||||||||||||||||||||    
T  7761338 tctccaaaatggacatgtattttgaaacggaggga 7761304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 1 - 135
Target Start/End: Original strand, 15064834 - 15064968
Alignment:
Q  1 aatagaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtacaatt 100  Q
    |||| ||| |||||||||||| ||||||||| |||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||  | |||||    
T  15064834 aatataatcaaataataaatggttaagggtagtataaaaaacacacacataatttcatcaaaaataacaaaatttatttggtttcttggttgctgcaatt 15064933  T
Q  101 tctccaaaatggacatgtattttgaaacggaggga 135  Q
    |||| ||||||||||||||||||||||||||||||    
T  15064934 tctctaaaatggacatgtattttgaaacggaggga 15064968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 6 - 123
Target Start/End: Original strand, 31559881 - 31559998
Alignment:
Q  6 aatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtacaatttctcc 105  Q
    ||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||| ||| ||||||| | ||||||||||    
T  31559881 aatgaaataataaatgattaagggtattacagaaaacatacacatattttcatcaaaaataacaaaatttatttgattttttggttaatgcaatttctcc 31559980  T
Q  106 aaaatggacatgtatttt 123  Q
    ||||||||||||||||||    
T  31559981 aaaatggacatgtatttt 31559998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 1 - 123
Target Start/End: Complemental strand, 8235761 - 8235639
Alignment:
Q  1 aatagaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtacaatt 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| | |||| |||||||||||| ||||||| |||||||||||| | |||||    
T  8235761 aatagaatgaaataataaatgattaagggtattatagaaaacacacacataatatcataaaaaataacaaattttatttcgtttcttggttactgcaatt 8235662  T
Q  101 tctccaaaatggacatgtatttt 123  Q
    ||| ||||||| |||||||||||    
T  8235661 tcttcaaaatgtacatgtatttt 8235639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 1 - 135
Target Start/End: Complemental strand, 4129564 - 4129438
Alignment:
Q  1 aatagaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtacaatt 100  Q
    |||| |||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||        ||||| | |||||    
T  4129564 aataaaatgaaataataaatggttaagggtattatagaaaacacacacatattttcataaaaaataacaaaatttattt--------ggttactgcaatt 4129473  T
Q  101 tctccaaaatggacatgtattttgaaacggaggga 135  Q
    |||||||| |||| |||||||||||||||||||||    
T  4129472 tctccaaagtggatatgtattttgaaacggaggga 4129438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 1 - 135
Target Start/End: Complemental strand, 17942582 - 17942446
Alignment:
Q  1 aatagaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaat--aacaaaatttatttggtttcttggttagtacaa 98  Q
    |||| |||||||||||||||| |||||||||||||||| ||||| |||||| |||||||||||||  || ||||  |||||||||||||||||| | |||    
T  17942582 aataaaatgaaataataaatggttaagggtattatagagaacacgcacataatttcatcaaaaataaaaaaaaaaatatttggtttcttggttactgcaa 17942483  T
Q  99 tttctccaaaatggacatgtattttgaaacggaggga 135  Q
    |||||| |||||||||||||||||||||||| |||||    
T  17942482 tttctcaaaaatggacatgtattttgaaacgaaggga 17942446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 23 - 132
Target Start/End: Original strand, 30734772 - 30734879
Alignment:
Q  23 ttaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtacaatttctccaaaatggacatgtattt 122  Q
    |||||||||||||||||||||||||  || |||||||||||||||||||||||||||| ||| || |||| | |||||||| ||||||||||||||||||    
T  30734772 ttaagggtattatagaaaacacaca--taatttcatcaaaaataacaaaatttatttgatttttttgttactgcaatttcttcaaaatggacatgtattt 30734869  T
Q  123 tgaaacggag 132  Q
    ||||||||||    
T  30734870 tgaaacggag 30734879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 21277574 - 21277659
Alignment:
Q  1 aatagaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttctt 87  Q
    ||||||||||| || ||||| |||||||||||||||||||| ||||| | |||||||| ||||||||||||||||||||| ||||||    
T  21277574 aatagaatgaagtactaaataattaagggtattatagaaaa-acacataaattttcataaaaaataacaaaatttatttgatttctt 21277659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 208 - 279
Target Start/End: Complemental strand, 28542090 - 28542019
Alignment:
Q  208 aaggaaaatgctaaatagtgcccttggggcattggttaaaagaacaataatgaaaatattgtgttggaaagt 279  Q
    |||| ||||| ||||||||||| |  ||||||||||||| ||||||||||| ||||||||||||||||||||    
T  28542090 aaggcaaatgttaaatagtgccttcagggcattggttaagagaacaataataaaaatattgtgttggaaagt 28542019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 8 - 90
Target Start/End: Complemental strand, 3798233 - 3798151
Alignment:
Q  8 tgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggt 90  Q
    ||||||||||||||  ||||||| |||||||||| ||||| |||  ||||| ||||||||||||||||||||| ||| |||||    
T  3798233 tgaaataataaatgtgtaagggtgttatagaaaaaacacaaataacttcatgaaaaataacaaaatttatttgattttttggt 3798151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 5 - 87
Target Start/End: Original strand, 11370629 - 11370711
Alignment:
Q  5 gaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttctt 87  Q
    ||||| ||||||||||| ||||| |||||||| |||| |||||   | | |||||||||||||||||||||||||| ||||||    
T  11370629 gaatggaataataaatggttaagagtattataaaaaaaacacaatgaatatcatcaaaaataacaaaatttatttgatttctt 11370711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 85 - 135
Target Start/End: Original strand, 19996715 - 19996765
Alignment:
Q  85 cttggttagtacaatttctccaaaatggacatgtattttgaaacggaggga 135  Q
    |||||||| | ||||||||||||||| ||||||||||||||||||||||||    
T  19996715 cttggttactgcaatttctccaaaatagacatgtattttgaaacggaggga 19996765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 14287125 - 14287038
Alignment:
Q  1 aatagaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttgg 89  Q
    |||| |||||||||||||| |  |||||||||||||||||| |  |||| | |||||| ||||||||||||||||||||| ||| ||||    
T  14287125 aataaaatgaaataataaaggggtaagggtattatagaaaaaag-cacagaatttcataaaaaataacaaaatttatttgatttattgg 14287038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 97 - 135
Target Start/End: Complemental strand, 19996363 - 19996325
Alignment:
Q  97 aatttctccaaaatggacatgtattttgaaacggaggga 135  Q
    |||||||| ||||||||||||||||||||||||||||||    
T  19996363 aatttctctaaaatggacatgtattttgaaacggaggga 19996325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 30235447 - 30235487
Alignment:
Q  1 aatagaatgaaataataaatgattaagggtattatagaaaa 41  Q
    ||||||||||||||||||||||||||| ||| |||||||||    
T  30235447 aatagaatgaaataataaatgattaagagtaatatagaaaa 30235487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 26860902 - 26860819
Alignment:
Q  1 aatagaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttg 88  Q
    |||||||| |||||||||||| ||||||||  ||||||| | ||||| |   ||||||||||||||| |||| ||||||| |||||||    
T  26860902 aatagaataaaataataaatggttaagggt--tatagaataaacacaaaa--tttcatcaaaaataaaaaaagttatttgatttcttg 26860819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 47 - 80
Target Start/End: Original strand, 33845469 - 33845502
Alignment:
Q  47 acatattttcatcaaaaataacaaaatttatttg 80  Q
    ||||| ||||||||||||||||||||||||||||    
T  33845469 acataatttcatcaaaaataacaaaatttatttg 33845502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 127; Significance: 2e-65; HSPs: 30)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 1 - 135
Target Start/End: Complemental strand, 25704788 - 25704654
Alignment:
Q  1 aatagaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtacaatt 100  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  25704788 aataaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtgcaatt 25704689  T
Q  101 tctccaaaatggacatgtattttgaaacggaggga 135  Q
    |||||||||||||||||||||||||||||||||||    
T  25704688 tctccaaaatggacatgtattttgaaacggaggga 25704654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 126; E-Value: 1e-64
Query Start/End: Original strand, 6 - 135
Target Start/End: Complemental strand, 21310557 - 21310428
Alignment:
Q  6 aatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtacaatttctcc 105  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  21310557 aatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtgcaatttctcc 21310458  T
Q  106 aaaatggacatgtattttgaaacggaggga 135  Q
    ||||||||||||||||||||||||||||||    
T  21310457 aaaatggacatgtattttgaaacggaggga 21310428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 123; E-Value: 6e-63
Query Start/End: Original strand, 1 - 131
Target Start/End: Original strand, 24706387 - 24706517
Alignment:
Q  1 aatagaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtacaatt 100  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  24706387 aataaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtgcaatt 24706486  T
Q  101 tctccaaaatggacatgtattttgaaacgga 131  Q
    |||||||||||||||||||||||||||||||    
T  24706487 tctccaaaatggacatgtattttgaaacgga 24706517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 1 - 135
Target Start/End: Complemental strand, 12071698 - 12071564
Alignment:
Q  1 aatagaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtacaatt 100  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||| |||||    
T  12071698 aataaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttagtttattggttagtgcaatt 12071599  T
Q  101 tctccaaaatggacatgtattttgaaacggaggga 135  Q
    |||||||||||||||||||||||||||||||||||    
T  12071598 tctccaaaatggacatgtattttgaaacggaggga 12071564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 1 - 135
Target Start/End: Complemental strand, 14261181 - 14261047
Alignment:
Q  1 aatagaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtacaatt 100  Q
    |||| ||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||    
T  14261181 aataaaatgaaataataaattattaagggtattatagaaaacacacacatatttttatcaaaaataacaaaatttatttggtttcttggttagtgcaatt 14261082  T
Q  101 tctccaaaatggacatgtattttgaaacggaggga 135  Q
    |||||||||||||||||||||||||||||||||||    
T  14261081 tctccaaaatggacatgtattttgaaacggaggga 14261047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 1 - 131
Target Start/End: Original strand, 22321407 - 22321537
Alignment:
Q  1 aatagaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtacaatt 100  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||    
T  22321407 aataaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcataaaaaataacaaaatttatttggtttcttggttagtgcaatt 22321506  T
Q  101 tctccaaaatggacatgtattttgaaacgga 131  Q
    |||||||||||||||||||||||||||||||    
T  22321507 tctccaaaatggacatgtattttgaaacgga 22321537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 116; E-Value: 9e-59
Query Start/End: Original strand, 1 - 135
Target Start/End: Original strand, 34324722 - 34324857
Alignment:
Q  1 aatagaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaattt-atttggtttcttggttagtacaat 99  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||| ||||    
T  34324722 aataaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttaatttagtttcttggttagtgcaat 34324821  T
Q  100 ttctccaaaatggacatgtattttgaaacggaggga 135  Q
    ||||||||||||||||||||||||||||||||||||    
T  34324822 ttctccaaaatggacatgtattttgaaacggaggga 34324857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 115; E-Value: 4e-58
Query Start/End: Original strand, 1 - 135
Target Start/End: Original strand, 40122625 - 40122759
Alignment:
Q  1 aatagaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtacaatt 100  Q
    |||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| | |||||    
T  40122625 aataaaatgaaataataaatggttaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggttttttggttactgcaatt 40122724  T
Q  101 tctccaaaatggacatgtattttgaaacggaggga 135  Q
    |||||||||||||||||||||||||||||||||||    
T  40122725 tctccaaaatggacatgtattttgaaacggaggga 40122759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 111; E-Value: 9e-56
Query Start/End: Original strand, 1 - 131
Target Start/End: Complemental strand, 44568974 - 44568844
Alignment:
Q  1 aatagaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtacaatt 100  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||| |||||    
T  44568974 aataaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcataaaaaataacaaaatttatttggttttttggttagtgcaatt 44568875  T
Q  101 tctccaaaatggacatgtattttgaaacgga 131  Q
    ||| |||||||||||||||||||||||||||    
T  44568874 tcttcaaaatggacatgtattttgaaacgga 44568844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 1 - 135
Target Start/End: Original strand, 21661675 - 21661809
Alignment:
Q  1 aatagaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtacaatt 100  Q
    |||| |||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| | |||||    
T  21661675 aataaaatgaaataataaatggttaaaggtattatagaaaacacacacatattttcatcaaaaataataaaatttatttggtttcttggttactgcaatt 21661774  T
Q  101 tctccaaaatggacatgtattttgaaacggaggga 135  Q
    ||||||||||||||||||||||||||| |||||||    
T  21661775 tctccaaaatggacatgtattttgaaagggaggga 21661809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 1 - 135
Target Start/End: Original strand, 21670439 - 21670573
Alignment:
Q  1 aatagaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtacaatt 100  Q
    |||| |||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| | |||||    
T  21670439 aataaaatgaaataataaatggttaaaggtattatagaaaacacacacatattttcatcaaaaataaaaaaatttatttggtttcttggttactgcaatt 21670538  T
Q  101 tctccaaaatggacatgtattttgaaacggaggga 135  Q
    ||||||||||||||||||||||||||| |||||||    
T  21670539 tctccaaaatggacatgtattttgaaagggaggga 21670573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 1 - 132
Target Start/End: Original strand, 20249153 - 20249283
Alignment:
Q  1 aatagaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtacaatt 100  Q
    |||||||| |||||||||||| |||||||||||||||||| |||||||||| |||| ||||||||||||||||||||||||||||||||||| |||||||    
T  20249153 aatagaataaaataataaatggttaagggtattatagaaa-cacacacataatttcttcaaaaataacaaaatttatttggtttcttggttaatacaatt 20249251  T
Q  101 tctccaaaatggacatgtattttgaaacggag 132  Q
    | ||||||||||||||||||||||||||||||    
T  20249252 tatccaaaatggacatgtattttgaaacggag 20249283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 1 - 131
Target Start/End: Complemental strand, 50768001 - 50767871
Alignment:
Q  1 aatagaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtacaatt 100  Q
    |||| ||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||| |||||    
T  50768001 aataaaatgaaataataaattattaagggtattatagaaaacacacatatattttcatcaaaaataacaaaatttatttggtttcttgattagtgcaatt 50767902  T
Q  101 tctccaaaatggacatgtattttgaaacgga 131  Q
    |||| |||||| | |||||||||||||||||    
T  50767901 tctctaaaatgaatatgtattttgaaacgga 50767871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 1 - 135
Target Start/End: Complemental strand, 31892371 - 31892241
Alignment:
Q  1 aatagaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtacaatt 100  Q
    ||||||||||||||||||||| | || ||||||||||||||||||    || ||||||||||||||| |||||||||||| ||||||||||| | |||||    
T  31892371 aatagaatgaaataataaatggtcaaaggtattatagaaaacaca----taatttcatcaaaaataataaaatttatttgatttcttggttactgcaatt 31892276  T
Q  101 tctccaaaatggacatgtattttgaaacggaggga 135  Q
    |||  |||||| ||||||||||||| |||||||||    
T  31892275 tctttaaaatgaacatgtattttgatacggaggga 31892241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 23 - 108
Target Start/End: Complemental strand, 1988150 - 1988065
Alignment:
Q  23 ttaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtacaatttctccaaa 108  Q
    ||||||||||||||||||||||| ||||| ||||||||||||||| |||||||||||| |||||| |||| | |||||||||||||    
T  1988150 ttaagggtattatagaaaacacatacataatttcatcaaaaataataaaatttatttgatttcttagttactgcaatttctccaaa 1988065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 1 - 113
Target Start/End: Complemental strand, 19692860 - 19692748
Alignment:
Q  1 aatagaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtacaatt 100  Q
    |||||||||||||||||||||| ||||| |||||||||||| ||||| | | |||||| |||||| |||| ||||||||| |||||||||  ||| ||||    
T  19692860 aatagaatgaaataataaatgagtaaggatattatagaaaaaacacaaagaatttcataaaaaatgacaacatttatttgatttcttggtatgtataatt 19692761  T
Q  101 tctccaaaatgga 113  Q
    ||| |||||||||    
T  19692760 tcttcaaaatgga 19692748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 1 - 113
Target Start/End: Complemental strand, 19703445 - 19703333
Alignment:
Q  1 aatagaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtacaatt 100  Q
    |||||||||||||||||||||| ||||| |||||||||||| ||||| | | |||||| |||||| |||| ||||||||| |||||||||  ||| ||||    
T  19703445 aatagaatgaaataataaatgagtaaggatattatagaaaaaacacaaagaatttcataaaaaatgacaacatttatttgatttcttggtatgtataatt 19703346  T
Q  101 tctccaaaatgga 113  Q
    ||| |||||||||    
T  19703345 tcttcaaaatgga 19703333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 1 - 90
Target Start/End: Original strand, 20714488 - 20714577
Alignment:
Q  1 aatagaatgaaataataaatgattaagggtattatagaaaa-cacacacatattttcatcaaaaataacaaaatttatttggtttcttggt 90  Q
    |||| |||||||||||||||| |||||| |||||||||||| |||||||||| |||||||||||||||||||||||||||| ||| |||||    
T  20714488 aatataatgaaataataaatggttaagg-tattatagaaaaacacacacatagtttcatcaaaaataacaaaatttatttgatttattggt 20714577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 5 - 88
Target Start/End: Original strand, 6129092 - 6129175
Alignment:
Q  5 gaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttg 88  Q
    ||||||||||||||||||||||||||||| ||||||| | ||| | | ||| |||||||||||||||||||||||| |||||||    
T  6129092 gaatgaaataataaatgattaagggtattgtagaaaaaatacaaagaattttatcaaaaataacaaaatttatttgatttcttg 6129175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 32543617 - 32543532
Alignment:
Q  1 aatagaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttctt 87  Q
    |||| ||||||||||||||||||||||||||||||| |||| ||||| | | ||||||||||| |||||||| ||||||||||||||    
T  32543617 aataaaatgaaataataaatgattaagggtattata-aaaaaacacaaagaatttcatcaaaattaacaaaaattatttggtttctt 32543532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 9 - 132
Target Start/End: Original strand, 26676714 - 26676837
Alignment:
Q  9 gaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtacaatttctccaaa 108  Q
    |||||||||||||| |||||||||||||||||| ||||  | | |||||| |||||| |||| ||||||||| || ||||||  ||  ||||||| ||||    
T  26676714 gaaataataaatgagtaagggtattatagaaaaaacacgaagaatttcataaaaaatgacaacatttatttgattccttggtatgtgtaatttcttcaaa 26676813  T
Q  109 atggacatgtattttgaaacggag 132  Q
    ||||| | ||||| ||||||||||    
T  26676814 atggataagtattgtgaaacggag 26676837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 210 - 281
Target Start/End: Original strand, 31463270 - 31463341
Alignment:
Q  210 ggaaaatgctaaatagtgcccttggggcattggttaaaagaacaataatgaaaatattgtgttggaaagtgg 281  Q
    ||||||||||||| ||||||||||||||||||| |||| |||||| |||  |||| ||||||||||||||||    
T  31463270 ggaaaatgctaaagagtgcccttggggcattggataaaggaacaaaaatagaaattttgtgttggaaagtgg 31463341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 15 - 78
Target Start/End: Original strand, 34284171 - 34284234
Alignment:
Q  15 ataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatt 78  Q
    |||||| |||||||||||||||||||| | ||| ||| ||||||||||| ||||||||||||||    
T  34284171 ataaataattaagggtattatagaaaaaatacaaatagtttcatcaaaagtaacaaaatttatt 34284234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 90
Target Start/End: Complemental strand, 48652356 - 48652268
Alignment:
Q  1 aatagaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggt 90  Q
    |||| ||||||||||||||||| |||  || ||| |||||| | ||| | | |||||||||||||||||||||||||||| |||||||||    
T  48652356 aatataatgaaataataaatgagtaaatgtgttaaagaaaa-atacaaagaatttcatcaaaaataacaaaatttatttgatttcttggt 48652268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 208 - 280
Target Start/End: Original strand, 51581431 - 51581503
Alignment:
Q  208 aaggaaaatgctaaatagtgcccttggggcattggttaaaagaacaataatgaaaatattgtgttggaaagtg 280  Q
    |||| |||||||||| |||||||||| |||||||| |||| |||||| |||  |||| |||||||||||||||    
T  51581431 aagggaaatgctaaagagtgcccttgaggcattggataaaggaacaaaaatagaaattttgtgttggaaagtg 51581503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 21064897 - 21064834
Alignment:
Q  1 aatagaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaata 66  Q
    ||||||||||||||||||||  ||||| |||||||  |||| ||||||||| ||||||||||||||    
T  21064897 aatagaatgaaataataaatagttaagagtattat--aaaaaacacacataatttcatcaaaaata 21064834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 207 - 281
Target Start/End: Original strand, 55465436 - 55465510
Alignment:
Q  207 taaggaaaatgctaaatagtgcccttggggcattggttaaaagaacaataatgaaaatattgtgttggaaagtgg 281  Q
    ||||||||||||||||   || |||| ||||||||||||| ||| |||||||  |||||||||||||| ||||||    
T  55465436 taaggaaaatgctaaaggatgtccttagggcattggttaagagatcaataatagaaatattgtgttgggaagtgg 55465510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 18507404 - 18507472
Alignment:
Q  1 aatagaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaa 70  Q
    |||| |||||||||||||||  | |||| |||||||||||| ||||||| | ||||||||||||||||||    
T  18507404 aatataatgaaataataaattgtcaagg-tattatagaaaaaacacacaaaatttcatcaaaaataacaa 18507472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 85 - 123
Target Start/End: Complemental strand, 19361700 - 19361662
Alignment:
Q  85 cttggttagtacaatttctccaaaatggacatgtatttt 123  Q
    |||||||| | ||||||||||||||||||||||||||||    
T  19361700 cttggttactgcaatttctccaaaatggacatgtatttt 19361662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 97 - 131
Target Start/End: Original strand, 19362189 - 19362223
Alignment:
Q  97 aatttctccaaaatggacatgtattttgaaacgga 131  Q
    |||||||| ||||||||||||||||||||||||||    
T  19362189 aatttctctaaaatggacatgtattttgaaacgga 19362223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 127; Significance: 2e-65; HSPs: 42)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 1 - 135
Target Start/End: Original strand, 23045419 - 23045553
Alignment:
Q  1 aatagaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtacaatt 100  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  23045419 aataaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtgcaatt 23045518  T
Q  101 tctccaaaatggacatgtattttgaaacggaggga 135  Q
    |||||||||||||||||||||||||||||||||||    
T  23045519 tctccaaaatggacatgtattttgaaacggaggga 23045553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 6 - 135
Target Start/End: Complemental strand, 284465 - 284336
Alignment:
Q  6 aatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtacaatttctcc 105  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  284465 aatgaaataataaatgattaagggtattatagaaaacacacatatattttcatcaaaaataacaaaatttatttggtttcttggttagtgcaatttctcc 284366  T
Q  106 aaaatggacatgtattttgaaacggaggga 135  Q
    ||||||||||||||||||||||||||||||    
T  284365 aaaatggacatgtattttgaaacggaggga 284336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 1 - 135
Target Start/End: Complemental strand, 321763 - 321629
Alignment:
Q  1 aatagaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtacaatt 100  Q
    |||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  321763 aataaaatgaaataataaatgattaaggatattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtgcaatt 321664  T
Q  101 tctccaaaatggacatgtattttgaaacggaggga 135  Q
    ||||||||||| |||||||||||||||||||||||    
T  321663 tctccaaaatgaacatgtattttgaaacggaggga 321629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 1 - 135
Target Start/End: Original strand, 40783797 - 40783931
Alignment:
Q  1 aatagaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtacaatt 100  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||    
T  40783797 aataaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttgatttcttggttagtgcaatt 40783896  T
Q  101 tctccaaaatggacatgtattttgaaacggaggga 135  Q
    ||||||||||| |||||||||||||||||||||||    
T  40783897 tctccaaaatgaacatgtattttgaaacggaggga 40783931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 111; E-Value: 9e-56
Query Start/End: Original strand, 1 - 135
Target Start/End: Original strand, 24772045 - 24772179
Alignment:
Q  1 aatagaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtacaatt 100  Q
    |||||||| |||||||||||| ||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||    
T  24772045 aatagaataaaataataaatggttaagggtattatagaaaatacacacataatttcatcaaaaataacaaaatttatttggtttcttggttagtgcaatt 24772144  T
Q  101 tctccaaaatggacatgtattttgaaacggaggga 135  Q
    ||| |||||||||||||||||||||||||||||||    
T  24772145 tcttcaaaatggacatgtattttgaaacggaggga 24772179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 108; E-Value: 5e-54
Query Start/End: Original strand, 1 - 131
Target Start/End: Original strand, 47037992 - 47038120
Alignment:
Q  1 aatagaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtacaatt 100  Q
    |||| |||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||| |||||| ||||||||||||    
T  47037992 aataaaatgaaataataaatgattaagggtattatagaaaacac--acatattttcatcaaaaataacaaaatttatttgatttcttagttagtacaatt 47038089  T
Q  101 tctccaaaatggacatgtattttgaaacgga 131  Q
    |||||||||||||||||||||||||||||||    
T  47038090 tctccaaaatggacatgtattttgaaacgga 47038120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 1 - 135
Target Start/End: Original strand, 27211104 - 27211238
Alignment:
Q  1 aatagaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtacaatt 100  Q
    |||||||| |||||||||||| ||||||||||||||||||||||||| ||| |||| ||||||||||||||||||||||||||||||||||| | |||||    
T  27211104 aatagaataaaataataaatggttaagggtattatagaaaacacacatataatttcctcaaaaataacaaaatttatttggtttcttggttattgcaatt 27211203  T
Q  101 tctccaaaatggacatgtattttgaaacggaggga 135  Q
    |||||||||||||||||||||||||||||||||||    
T  27211204 tctccaaaatggacatgtattttgaaacggaggga 27211238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 103; E-Value: 5e-51
Query Start/End: Original strand, 1 - 127
Target Start/End: Complemental strand, 23526377 - 23526251
Alignment:
Q  1 aatagaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtacaatt 100  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||| | |||||    
T  23526377 aatagaatgaaataataaatggttaagggtattatagaaaacacacacataatttcatcaaaaataacaaaatttatttggtttcttgattactgcaatt 23526278  T
Q  101 tctccaaaatggacatgtattttgaaa 127  Q
    ||||||||||| |||||||||||||||    
T  23526277 tctccaaaatgaacatgtattttgaaa 23526251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 103; E-Value: 5e-51
Query Start/End: Original strand, 1 - 131
Target Start/End: Complemental strand, 46771774 - 46771644
Alignment:
Q  1 aatagaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtacaatt 100  Q
    |||||||||||| |||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||  ||||||||||| | |||||    
T  46771774 aatagaatgaaaaaataaatggttaagggtattatagaaaacacacacataatttcatcaaaaataacaaaatttatttaatttcttggttactgcaatt 46771675  T
Q  101 tctccaaaatggacatgtattttgaaacgga 131  Q
    |||||||||||||||||||||||||||||||    
T  46771674 tctccaaaatggacatgtattttgaaacgga 46771644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 1 - 118
Target Start/End: Complemental strand, 33082882 - 33082765
Alignment:
Q  1 aatagaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtacaatt 100  Q
    |||||||| |||||||||||| ||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||| ||||||||||||| |||||    
T  33082882 aatagaataaaataataaatggttaagggtattatagaaaatacacacataatttcatcaaaaataacaaaatttatttgatttcttggttagtgcaatt 33082783  T
Q  101 tctccaaaatggacatgt 118  Q
    |||||||||| |||||||    
T  33082782 tctccaaaatagacatgt 33082765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 1 - 123
Target Start/End: Original strand, 52037262 - 52037382
Alignment:
Q  1 aatagaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtacaatt 100  Q
    ||||||||||||||||||||| ||||| |||||||||||||||||||  || ||| ||||||||||| |||||||||||||||| |||| || | |||||    
T  52037262 aatagaatgaaataataaatggttaagagtattatagaaaacacaca--taattttatcaaaaataataaaatttatttggttttttggataatgcaatt 52037359  T
Q  101 tctccaaaatggacatgtatttt 123  Q
    |||| ||||||||||||||||||    
T  52037360 tctctaaaatggacatgtatttt 52037382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 1749444 - 1749357
Alignment:
Q  1 aatagaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttg 88  Q
    |||||||| |||||||||||| |||| | |||||||||||||||||| ||| |||||||||||||||||||||||||||| |||||||    
T  1749444 aatagaataaaataataaatggttaatgctattatagaaaacacacatataatttcatcaaaaataacaaaatttatttgatttcttg 1749357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 1 - 90
Target Start/End: Original strand, 31003926 - 31004012
Alignment:
Q  1 aatagaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggt 90  Q
    |||||||| |||||||||||| ||||||||||||||||||| | ||||||| |||||| ||||||   |||||||||||| |||||||||    
T  31003926 aatagaattaaataataaatggttaagggtattatagaaaaaatacacatactttcattaaaaat---aaaatttatttgatttcttggt 31004012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 1 - 135
Target Start/End: Original strand, 51064893 - 51065030
Alignment:
Q  1 aatagaatgaaataataaatgattaagggtatt---atagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtaca 97  Q
    |||| |||||||||||||| || ||||||||||   |||||||| ||||| | | ||||||||||||| |||| ||||||||| || ||||||  ||  |    
T  51064893 aatataatgaaataataaacgagtaagggtattattatagaaaaaacacaaagaatttcatcaaaaatgacaacatttatttgattccttggtatgtgta 51064992  T
Q  98 atttctccaaaatggacatgtattttgaaacggaggga 135  Q
    ||||||  |||||||||| ||||| |||||||||||||    
T  51064993 atttctttaaaatggacaagtattgtgaaacggaggga 51065030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 10 - 87
Target Start/End: Original strand, 1837978 - 1838053
Alignment:
Q  10 aaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttctt 87  Q
    ||||||||||||  |||||||||||||||||| |||||  || |||||||||||||||||||||||||||| ||||||    
T  1837978 aaataataaatgggtaagggtattatagaaaaaacaca--taatttcatcaaaaataacaaaatttatttgatttctt 1838053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 1 - 90
Target Start/End: Complemental strand, 3657212 - 3657125
Alignment:
Q  1 aatagaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggt 90  Q
    |||||||||||||  |||||| |||||| |||||||||||| ||| ||| | |||||| ||||||||||||||||||||| |||||||||    
T  3657212 aatagaatgaaat--taaatggttaaggttattatagaaaaaacatacaaaatttcattaaaaataacaaaatttatttgatttcttggt 3657125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 1 - 90
Target Start/End: Complemental strand, 52478103 - 52478016
Alignment:
Q  1 aatagaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggt 90  Q
    ||||||||||||| ||||||  |||||| |||||||||||| ||||| |   |||||||||||||||||||||||||||| |||||||||    
T  52478103 aatagaatgaaatgataaatttttaaggttattatagaaaaaacacaaaa--tttcatcaaaaataacaaaatttatttgatttcttggt 52478016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 27143151 - 27143239
Alignment:
Q  1 aatagaatgaaataataaatgattaagggtattatagaaaaca-cacacatattttcatcaaaaataacaaaatttatttggtttcttg 88  Q
    |||||||||||||||||||||||||||  |||||||||||| | | |||  | |||| ||||||||||||||||||||||| |||||||    
T  27143151 aatagaatgaaataataaatgattaagaatattatagaaaaaaactcacggaatttcctcaaaaataacaaaatttatttgatttcttg 27143239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 85 - 135
Target Start/End: Complemental strand, 3943113 - 3943063
Alignment:
Q  85 cttggttagtacaatttctccaaaatggacatgtattttgaaacggaggga 135  Q
    |||||||| | ||||||||||||||||||||||||||||||||||||||||    
T  3943113 cttggttactgcaatttctccaaaatggacatgtattttgaaacggaggga 3943063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 85 - 135
Target Start/End: Complemental strand, 9588723 - 9588673
Alignment:
Q  85 cttggttagtacaatttctccaaaatggacatgtattttgaaacggaggga 135  Q
    |||||||| | ||||||||||||||||||||||||||||||||||||||||    
T  9588723 cttggttactgcaatttctccaaaatggacatgtattttgaaacggaggga 9588673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 18396832 - 18396754
Alignment:
Q  1 aatagaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttattt 79  Q
    |||||||||||||||| |||| ||||   ||||||||||||  |||||||| |||||| ||||||||||||||||||||    
T  18396832 aatagaatgaaataatgaatggttaaatatattatagaaaaaccacacataatttcataaaaaataacaaaatttattt 18396754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 85 - 135
Target Start/End: Complemental strand, 41959131 - 41959081
Alignment:
Q  85 cttggttagtacaatttctccaaaatggacatgtattttgaaacggaggga 135  Q
    |||||||| | ||||||||||||||||||||||||||||||||||||||||    
T  41959131 cttggttattgcaatttctccaaaatggacatgtattttgaaacggaggga 41959081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 10 - 79
Target Start/End: Complemental strand, 7765141 - 7765072
Alignment:
Q  10 aaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttattt 79  Q
    |||||||||||| ||| ||||||||  ||||||||||| ||| ||||| |||||||||||||||||||||    
T  7765141 aaataataaatggttatgggtattacggaaaacacacatataatttcaccaaaaataacaaaatttattt 7765072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 85 - 131
Target Start/End: Original strand, 13984991 - 13985037
Alignment:
Q  85 cttggttagtacaatttctccaaaatggacatgtattttgaaacgga 131  Q
    |||||||| | ||||||||||||||||||||||||||||||||||||    
T  13984991 cttggttactgcaatttctccaaaatggacatgtattttgaaacgga 13985037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 1 - 90
Target Start/End: Original strand, 34458863 - 34458950
Alignment:
Q  1 aatagaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggt 90  Q
    |||||||||||||||||||| | ||||| |||||||||||  | ||||| | |||||| |||||||  |||||||||||| |||||||||    
T  34458863 aatagaatgaaataataaattagtaaggttattatagaaa--aaacacagaatttcataaaaaatagaaaaatttatttgatttcttggt 34458950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 9 - 90
Target Start/End: Original strand, 40261419 - 40261501
Alignment:
Q  9 gaaataataaatgattaagggtattatagaaaaca-cacacatattttcatcaaaaataacaaaatttatttggtttcttggt 90  Q
    ||||||||||||| |||| | |||||||||||| | |||||  | ||||||||||| |||||||||||||||| |||||||||    
T  40261419 gaaataataaatggttaatgatattatagaaaaaaacacacgcaatttcatcaaaattaacaaaatttatttgatttcttggt 40261501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 97 - 135
Target Start/End: Complemental strand, 44227889 - 44227851
Alignment:
Q  97 aatttctccaaaatggacatgtattttgaaacggaggga 135  Q
    |||||||||||||||||||||||||||||||||||||||    
T  44227889 aatttctccaaaatggacatgtattttgaaacggaggga 44227851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 31061594 - 31061662
Alignment:
Q  1 aatagaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaa 70  Q
    |||| |||||||||||||||| ||| ||||||||| ||||| ||||||||| |||||| |||||||||||    
T  31061594 aatataatgaaataataaatggtta-gggtattatggaaaaaacacacataatttcataaaaaataacaa 31061662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 13 - 78
Target Start/End: Original strand, 40562733 - 40562797
Alignment:
Q  13 taataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatt 78  Q
    ||||||||| |||| |||||||||||||||||| | ||| ||| ||||||||||||||||||||||    
T  40562733 taataaatggttaatggtattatagaaaacacatatataattt-atcaaaaataacaaaatttatt 40562797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 97 - 141
Target Start/End: Original strand, 3943763 - 3943807
Alignment:
Q  97 aatttctccaaaatggacatgtattttgaaacggagggattacta 141  Q
    |||||||| |||||||||||||||||||||||||||||| |||||    
T  3943763 aatttctctaaaatggacatgtattttgaaacggagggagtacta 3943807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 209 - 277
Target Start/End: Complemental strand, 7785189 - 7785121
Alignment:
Q  209 aggaaaatgctaaatagtgcccttggggcattggttaaaagaacaataatgaaaatattgtgttggaaa 277  Q
    |||||||||||||| |||||| |||  | ||||||||| ||||||||||| ||||||||||||| ||||    
T  7785189 aggaaaatgctaaagagtgcctttgatgtattggttaagagaacaataataaaaatattgtgttagaaa 7785121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 97 - 135
Target Start/End: Original strand, 41959809 - 41959847
Alignment:
Q  97 aatttctccaaaatggacatgtattttgaaacggaggga 135  Q
    |||||||| ||||||||||||||||||||||||||||||    
T  41959809 aatttctctaaaatggacatgtattttgaaacggaggga 41959847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 96 - 133
Target Start/End: Original strand, 44228239 - 44228276
Alignment:
Q  96 caatttctccaaaatggacatgtattttgaaacggagg 133  Q
    |||||||||||||||||||||||||||||||| |||||    
T  44228239 caatttctccaaaatggacatgtattttgaaatggagg 44228276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 208 - 248
Target Start/End: Complemental strand, 14331971 - 14331931
Alignment:
Q  208 aaggaaaatgctaaatagtgcccttggggcattggttaaaa 248  Q
    |||| |||||||||| |||||||||||||||||||||||||    
T  14331971 aagggaaatgctaaagagtgcccttggggcattggttaaaa 14331931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 72 - 124
Target Start/End: Original strand, 40564241 - 40564293
Alignment:
Q  72 atttatttggtttcttggttagtacaatttctccaaaatggacatgtattttg 124  Q
    ||||||||||||||||||||| | | |||| |||||||||||||| |||||||    
T  40564241 atttatttggtttcttggttactgcgatttttccaaaatggacatatattttg 40564293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 55 - 90
Target Start/End: Original strand, 14351954 - 14351989
Alignment:
Q  55 tcatcaaaaataacaaaatttatttggtttcttggt 90  Q
    |||||||||||||||||||||||||| |||||||||    
T  14351954 tcatcaaaaataacaaaatttatttgttttcttggt 14351989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 24876699 - 24876633
Alignment:
Q  1 aatagaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaa 70  Q
    ||||||||||||| ||||||| | || ||||||||||||||   ||||||| | ||||||||||||||||    
T  24876699 aatagaatgaaatgataaatggtcaaaggtattatagaaaa---acacataatatcatcaaaaataacaa 24876633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 97 - 135
Target Start/End: Original strand, 9589631 - 9589669
Alignment:
Q  97 aatttctccaaaatggacatgtattttgaaacggaggga 135  Q
    |||||||| ||||| ||||||||||||||||||||||||    
T  9589631 aatttctctaaaatagacatgtattttgaaacggaggga 9589669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 209 - 246
Target Start/End: Complemental strand, 16691427 - 16691390
Alignment:
Q  209 aggaaaatgctaaatagtgcccttggggcattggttaa 246  Q
    |||||||||||||  |||||||||||||||||||||||    
T  16691427 aggaaaatgctaatgagtgcccttggggcattggttaa 16691390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 5 - 41
Target Start/End: Complemental strand, 33711228 - 33711192
Alignment:
Q  5 gaatgaaataataaatgattaagggtattatagaaaa 41  Q
    |||||||||||||||| ||||||||||||||| ||||    
T  33711228 gaatgaaataataaataattaagggtattataaaaaa 33711192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 237 - 281
Target Start/End: Complemental strand, 39323509 - 39323465
Alignment:
Q  237 cattggttaaaagaacaataatgaaaatattgtgttggaaagtgg 281  Q
    ||||||||||  ||||||||||  |||||||||||||||||||||    
T  39323509 cattggttaagtgaacaataatagaaatattgtgttggaaagtgg 39323465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 198 - 246
Target Start/End: Complemental strand, 43168285 - 43168237
Alignment:
Q  198 ttaatttattaaggaaaatgctaaatagtgcccttggggcattggttaa 246  Q
    ||||||| || ||| |||||||||| ||||||||| |||||||||||||    
T  43168285 ttaatttttttagggaaatgctaaagagtgcccttagggcattggttaa 43168237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 126; Significance: 1e-64; HSPs: 37)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 126; E-Value: 1e-64
Query Start/End: Original strand, 1 - 142
Target Start/End: Original strand, 11174363 - 11174504
Alignment:
Q  1 aatagaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtacaatt 100  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  11174363 aataaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtgcaatt 11174462  T
Q  101 tctccaaaatggacatgtattttgaaacggagggattactag 142  Q
    ||||||||||| ||||||||||||||||||||||| ||||||    
T  11174463 tctccaaaatgaacatgtattttgaaacggagggagtactag 11174504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 125; E-Value: 4e-64
Query Start/End: Original strand, 1 - 133
Target Start/End: Original strand, 2540071 - 2540203
Alignment:
Q  1 aatagaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtacaatt 100  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  2540071 aataaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtgcaatt 2540170  T
Q  101 tctccaaaatggacatgtattttgaaacggagg 133  Q
    |||||||||||||||||||||||||||||||||    
T  2540171 tctccaaaatggacatgtattttgaaacggagg 2540203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 123; E-Value: 6e-63
Query Start/End: Original strand, 1 - 135
Target Start/End: Original strand, 40058443 - 40058577
Alignment:
Q  1 aatagaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtacaatt 100  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  40058443 aataaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtgcaatt 40058542  T
Q  101 tctccaaaatggacatgtattttgaaacggaggga 135  Q
    ||||| |||||||||||||||||||||||||||||    
T  40058543 tctccgaaatggacatgtattttgaaacggaggga 40058577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 6 - 135
Target Start/End: Complemental strand, 3585583 - 3585454
Alignment:
Q  6 aatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtacaatttctcc 105  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  3585583 aatgaaataataaatgattaagggtattatagaaaacacacatatattttcatcaaaaataacaaaatttatttggtttcttggttagtgcaatttctcc 3585484  T
Q  106 aaaatggacatgtattttgaaacggaggga 135  Q
    ||||||||||||||||||||||||||||||    
T  3585483 aaaatggacatgtattttgaaacggaggga 3585454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 118; E-Value: 6e-60
Query Start/End: Original strand, 6 - 135
Target Start/End: Original strand, 11646470 - 11646599
Alignment:
Q  6 aatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtacaatttctcc 105  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  11646470 aatgaaataataaatgattaagggtattatagaaaacacacatatattttcatcaaaaataacaaaatttatttggtttcttggttagtgcaatttctcc 11646569  T
Q  106 aaaatggacatgtattttgaaacggaggga 135  Q
    |||||||||||||||||||||||| |||||    
T  11646570 aaaatggacatgtattttgaaacgaaggga 11646599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 116; E-Value: 9e-59
Query Start/End: Original strand, 1 - 135
Target Start/End: Original strand, 43275539 - 43275671
Alignment:
Q  1 aatagaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtacaatt 100  Q
    |||| |||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  43275539 aataaaatgaaataataaatgattaagggtattatagaaaacac--acatattttcatcaaaaataacaaaatttatttggtttcttggttagtgcaatt 43275636  T
Q  101 tctccaaaatggacatgtattttgaaacggaggga 135  Q
    |||||||||||||||||||||||||||||||||||    
T  43275637 tctccaaaatggacatgtattttgaaacggaggga 43275671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 115; E-Value: 4e-58
Query Start/End: Original strand, 1 - 135
Target Start/End: Complemental strand, 37345708 - 37345574
Alignment:
Q  1 aatagaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtacaatt 100  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| || |||||    
T  37345708 aataaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcattaaaaataacaaaatttatttggtttcttggttggtgcaatt 37345609  T
Q  101 tctccaaaatggacatgtattttgaaacggaggga 135  Q
    ||| |||||||||||||||||||||||||||||||    
T  37345608 tcttcaaaatggacatgtattttgaaacggaggga 37345574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 1 - 140
Target Start/End: Complemental strand, 7147050 - 7146911
Alignment:
Q  1 aatagaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtacaatt 100  Q
    |||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||    
T  7147050 aataaaatgaaataataaatgattaagggtattataaaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttactgcaatt 7146951  T
Q  101 tctccaaaatggacatgtattttgaaacggagggattact 140  Q
    ||| ||||||||||||||||||||||||||| ||| ||||    
T  7146950 tcttcaaaatggacatgtattttgaaacggaaggagtact 7146911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 6 - 135
Target Start/End: Complemental strand, 36068212 - 36068083
Alignment:
Q  6 aatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtacaatttctcc 105  Q
    ||||||||||| |||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||| ||||||||||||||| ||||    
T  36068212 aatgaaataattaatgattaagggtattatagaaaacacacatatattttcattaaaaataacaaaatttatttggttttttggttagtacaattcctcc 36068113  T
Q  106 aaaatggacatgtattttgaaacggaggga 135  Q
    ||||||||||||||||||||||||||||||    
T  36068112 aaaatggacatgtattttgaaacggaggga 36068083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 108; E-Value: 5e-54
Query Start/End: Original strand, 1 - 131
Target Start/End: Original strand, 30999663 - 30999791
Alignment:
Q  1 aatagaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtacaatt 100  Q
    |||| |||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  30999663 aataaaatgaaataataaatgattaagggtattatagaaaacac--acatattttcatcaaaaataacaaaatttatttggtttcttggttagtgcaatt 30999760  T
Q  101 tctccaaaatggacatgtattttgaaacgga 131  Q
    |||||||||| ||||||||||||||||||||    
T  30999761 tctccaaaattgacatgtattttgaaacgga 30999791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 108; E-Value: 5e-54
Query Start/End: Original strand, 1 - 135
Target Start/End: Original strand, 40918871 - 40919003
Alignment:
Q  1 aatagaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtacaatt 100  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||  | ||||||| ||||||||||||||||||||||||||||||||||| |||||    
T  40918871 aataaaatgaaataataaatgattaagggtattatagaaaacacaca--tgttttcataaaaaataacaaaatttatttggtttcttggttagtgcaatt 40918968  T
Q  101 tctccaaaatggacatgtattttgaaacggaggga 135  Q
    |||||||||||||||||||||||||||||||||||    
T  40918969 tctccaaaatggacatgtattttgaaacggaggga 40919003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 1 - 135
Target Start/End: Complemental strand, 27035133 - 27035000
Alignment:
Q  1 aatagaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtacaatt 100  Q
    ||||||||||||||||||||| |||||||||||||||||| |||| ||||| ||||||||||||||| |||| ||||||||||||||||||| | |||||    
T  27035133 aatagaatgaaataataaatggttaagggtattatagaaa-cacagacataatttcatcaaaaataaaaaaaattatttggtttcttggttactgcaatt 27035035  T
Q  101 tctccaaaatggacatgtattttgaaacggaggga 135  Q
    |||||||||||||||||||||||||||||||||||    
T  27035034 tctccaaaatggacatgtattttgaaacggaggga 27035000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 1 - 135
Target Start/End: Original strand, 20546429 - 20546561
Alignment:
Q  1 aatagaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtacaatt 100  Q
    |||| |||||||||||||||  |||||||||| ||| ||||||||||  || |||||||||||||||||||||||||||  ||||||| ||  | |||||    
T  20546429 aatataatgaaataataaattgttaagggtatcatataaaacacaca--taatttcatcaaaaataacaaaatttatttaatttcttgattgttgcaatt 20546526  T
Q  101 tctccaaaatggacatgtattttgaaacggaggga 135  Q
    ||| |||||||||||| |||||||||| |||||||    
T  20546527 tcttcaaaatggacatatattttgaaatggaggga 20546561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 5 - 133
Target Start/End: Complemental strand, 28562555 - 28562426
Alignment:
Q  5 gaatgaaataataaatgattaagggtattatagaaaaca-cacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtacaatttct 103  Q
    ||||||||| |||||||| |||||||||||||||||| | |||| | | ||||||||||||| |||| ||||||||| || ||||||  ||  |||||||    
T  28562555 gaatgaaatcataaatgagtaagggtattatagaaaaaaacacaaagaatttcatcaaaaatgacaacatttatttgattccttggtatgtgtaatttct 28562456  T
Q  104 ccaaaatggacatgtattttgaaacggagg 133  Q
     ||||||||||| |||||||||||||||||    
T  28562455 tcaaaatggacaagtattttgaaacggagg 28562426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 1 - 131
Target Start/End: Complemental strand, 35866751 - 35866621
Alignment:
Q  1 aatagaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtacaatt 100  Q
    |||||||| |||||||||||| ||||||||||||||||||| ||||| | | |||||| ||||||||||| |||||| |  |||||||||   || ||||    
T  35866751 aatagaataaaataataaatgtttaagggtattatagaaaaaacacaaagaatttcatgaaaaataacaacatttatctaatttcttggtatatataatt 35866652  T
Q  101 tctccaaaatggacatgtattttgaaacgga 131  Q
    |||  |||||||||| ||||| |||||||||    
T  35866651 tctttaaaatggacaagtattgtgaaacgga 35866621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 13881094 - 13881174
Alignment:
Q  1 aatagaatgaaataataaatgattaagggtattatag-aaaacacacacatattttcatcaaaaataacaaaatttatttg 80  Q
    |||| |||||||||||||||||||||||||||||||| |||| || |||| | ||||||||||||||||||||||||||||    
T  13881094 aatataatgaaataataaatgattaagggtattatagaaaaaaacgcacacaatttcatcaaaaataacaaaatttatttg 13881174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 1 - 90
Target Start/End: Original strand, 28326797 - 28326883
Alignment:
Q  1 aatagaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggt 90  Q
    ||||||||||||||||||||  ||||| ||||||| |||||   ||||||| |||||||||||||||||||||||||||| |||||||||    
T  28326797 aatagaatgaaataataaatagttaagagtattattgaaaa---acacataatttcatcaaaaataacaaaatttatttgatttcttggt 28326883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 209 - 281
Target Start/End: Original strand, 40058167 - 40058239
Alignment:
Q  209 aggaaaatgctaaatagtgcccttggggcattggttaaaagaacaataatgaaaatattgtgttggaaagtgg 281  Q
    |||||||||||||| | |||||||  |||||||||||| ||||||||||| |||||||||| |||||||||||    
T  40058167 aggaaaatgctaaacattgcccttaaggcattggttaagagaacaataataaaaatattgtcttggaaagtgg 40058239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 85 - 135
Target Start/End: Original strand, 8697898 - 8697948
Alignment:
Q  85 cttggttagtacaatttctccaaaatggacatgtattttgaaacggaggga 135  Q
    |||||||| | ||||||||||||||||||||||||||||||||||||||||    
T  8697898 cttggttactgcaatttctccaaaatggacatgtattttgaaacggaggga 8697948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 85 - 135
Target Start/End: Original strand, 41307961 - 41308011
Alignment:
Q  85 cttggttagtacaatttctccaaaatggacatgtattttgaaacggaggga 135  Q
    |||||||| | ||||||||||||||||||||||||||||||||||||||||    
T  41307961 cttggttactgcaatttctccaaaatggacatgtattttgaaacggaggga 41308011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 85 - 135
Target Start/End: Original strand, 45278701 - 45278751
Alignment:
Q  85 cttggttagtacaatttctccaaaatggacatgtattttgaaacggaggga 135  Q
    |||||||| | ||||||||||||||||||||||||||||||||||||||||    
T  45278701 cttggttactgcaatttctccaaaatggacatgtattttgaaacggaggga 45278751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 5 - 133
Target Start/End: Complemental strand, 28568052 - 28567924
Alignment:
Q  5 gaatgaaataataaatgattaagggtattatagaaaac-acacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtacaatttct 103  Q
    ||||||||||||||||||  | |||||||||||||||  ||||| | | |||||| |||||| |||| ||||||||| ||  |||||  ||  |||||||    
T  28568052 gaatgaaataataaatgagca-gggtattatagaaaaagacacaaagaatttcataaaaaatgacaacatttatttgattcattggtatgtgtaatttct 28567954  T
Q  104 ccaaaatggacatgtattttgaaacggagg 133  Q
     ||||||||||| |||||||||||||||||    
T  28567953 tcaaaatggacaagtattttgaaacggagg 28567924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 5 - 133
Target Start/End: Complemental strand, 28575645 - 28575517
Alignment:
Q  5 gaatgaaataataaatgattaagggtattatagaaaac-acacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtacaatttct 103  Q
    ||||||||||||||||||  | |||||||||||||||  ||||| | | |||||| |||||| |||| ||||||||| ||  |||||  ||  |||||||    
T  28575645 gaatgaaataataaatgagca-gggtattatagaaaaagacacaaagaatttcataaaaaatgacaacatttatttgattcattggtatgtgtaatttct 28575547  T
Q  104 ccaaaatggacatgtattttgaaacggagg 133  Q
     ||||||||||| |||||||||||||||||    
T  28575546 tcaaaatggacaagtattttgaaacggagg 28575517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 90
Target Start/End: Complemental strand, 37510403 - 37510314
Alignment:
Q  1 aatagaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggt 90  Q
    |||| ||||||||| |||||||||||||||||||| ||||| | | | | | ||| || |||||||||||||||||||| ||||||||||    
T  37510403 aataaaatgaaatattaaatgattaagggtattattgaaaaaatagaaagaattttattaaaaataacaaaatttatttagtttcttggt 37510314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 85 - 133
Target Start/End: Complemental strand, 10646645 - 10646597
Alignment:
Q  85 cttggttagtacaatttctccaaaatggacatgtattttgaaacggagg 133  Q
    |||||||| | ||||||||||||||||||||||||||||||||||||||    
T  10646645 cttggttactgcaatttctccaaaatggacatgtattttgaaacggagg 10646597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 208 - 280
Target Start/End: Original strand, 36054957 - 36055029
Alignment:
Q  208 aaggaaaatgctaaatagtgcccttggggcattggttaaaagaacaataatgaaaatattgtgttggaaagtg 280  Q
    ||||||||||||||| |||| | |||||||||||| |||| |||||| ||| ||||| |||||||||||||||    
T  36054957 aaggaaaatgctaaagagtgtctttggggcattggataaaggaacaaaaataaaaattttgtgttggaaagtg 36055029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 213 - 280
Target Start/End: Complemental strand, 6237597 - 6237530
Alignment:
Q  213 aaatgctaaatagtgcccttggggcattggttaaaagaacaataatgaaaatattgtgttggaaagtg 280  Q
    |||||||||||| |||||||||| |||||||||||||||||| ||| |||||||  |||||| |||||    
T  6237597 aaatgctaaataatgcccttgggacattggttaaaagaacaaaaataaaaatatcttgttgggaagtg 6237530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 85 - 135
Target Start/End: Original strand, 40486453 - 40486503
Alignment:
Q  85 cttggttagtacaatttctccaaaatggacatgtattttgaaacggaggga 135  Q
    |||||||| | |||||||| |||||||||||||||||||||||||||||||    
T  40486453 cttggttactgcaatttcttcaaaatggacatgtattttgaaacggaggga 40486503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 2 - 79
Target Start/End: Original strand, 10180998 - 10181074
Alignment:
Q  2 atagaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttattt 79  Q
    |||||||||||||||||||| |||| ||||||||| |||| ||| || || ||| || ||||||||||||||||||||    
T  10180998 atagaatgaaataataaatggttaacggtattata-aaaaaacaaacgtaattttataaaaaataacaaaatttattt 10181074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 39151542 - 39151464
Alignment:
Q  1 aatagaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttg 80  Q
    |||||||| |||||||||||||| ||   |||||||||||| | | ||||| ||||||||||||||||||| ||||||||    
T  39151542 aatagaataaaataataaatgataaattatattatagaaaaaa-atacataatttcatcaaaaataacaaagtttatttg 39151464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 210 - 253
Target Start/End: Complemental strand, 42543104 - 42543061
Alignment:
Q  210 ggaaaatgctaaatagtgcccttggggcattggttaaaagaaca 253  Q
    ||||||||||||| |||||||||||||||||||||||| |||||    
T  42543104 ggaaaatgctaaagagtgcccttggggcattggttaaatgaaca 42543061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 30906828 - 30906917
Alignment:
Q  1 aatagaatgaaataataaatgattaagggtattatagaaaacacac--acatattttcatcaaaaataacaaaatttatttggtttcttg 88  Q
    |||||||| |||||||||||| |||||| | | |||||||| | ||  ||| | |||||| ||||||||||||||||||||| |||||||    
T  30906828 aatagaattaaataataaatggttaaggttttcatagaaaaaaaactcacaaaatttcataaaaaataacaaaatttatttgatttcttg 30906917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 224 - 280
Target Start/End: Complemental strand, 40452028 - 40451972
Alignment:
Q  224 agtgcccttggggcattggttaaaagaacaataatgaaaatattgtgttggaaagtg 280  Q
    ||||||||| ||||||||| |||| |||||| |||| |||| |||||||||||||||    
T  40452028 agtgccctttgggcattggataaaggaacaaaaatggaaattttgtgttggaaagtg 40451972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 207 - 246
Target Start/End: Original strand, 39972126 - 39972165
Alignment:
Q  207 taaggaaaatgctaaatagtgcccttggggcattggttaa 246  Q
    |||||||||||||||| ||||||||| |||||||||||||    
T  39972126 taaggaaaatgctaaagagtgcccttagggcattggttaa 39972165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 97 - 132
Target Start/End: Complemental strand, 41305803 - 41305768
Alignment:
Q  97 aatttctccaaaatggacatgtattttgaaacggag 132  Q
    |||||||| |||||||||||||||||||||||||||    
T  41305803 aatttctctaaaatggacatgtattttgaaacggag 41305768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 209 - 247
Target Start/End: Original strand, 8488605 - 8488643
Alignment:
Q  209 aggaaaatgctaaatagtgcccttggggcattggttaaa 247  Q
    |||||||||||||  ||||||||||||||||||||||||    
T  8488605 aggaaaatgctaacgagtgcccttggggcattggttaaa 8488643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 97 - 129
Target Start/End: Complemental strand, 45278053 - 45278021
Alignment:
Q  97 aatttctccaaaatggacatgtattttgaaacg 129  Q
    |||||||| ||||||||||||||||||||||||    
T  45278053 aatttctctaaaatggacatgtattttgaaacg 45278021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1431 (Bit Score: 124; Significance: 2e-63; HSPs: 1)
Name: scaffold1431
Description:

Target: scaffold1431; HSP #1
Raw Score: 124; E-Value: 2e-63
Query Start/End: Original strand, 1 - 132
Target Start/End: Original strand, 39 - 170
Alignment:
Q  1 aatagaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtacaatt 100  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  39 aataaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtgcaatt 138  T
Q  101 tctccaaaatggacatgtattttgaaacggag 132  Q
    ||||||||||||||||||||||||||||||||    
T  139 tctccaaaatggacatgtattttgaaacggag 170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 123; Significance: 6e-63; HSPs: 22)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 123; E-Value: 6e-63
Query Start/End: Original strand, 1 - 135
Target Start/End: Original strand, 12806993 - 12807127
Alignment:
Q  1 aatagaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtacaatt 100  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||    
T  12806993 aataaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttaatgcaatt 12807092  T
Q  101 tctccaaaatggacatgtattttgaaacggaggga 135  Q
    |||||||||||||||||||||||||||||||||||    
T  12807093 tctccaaaatggacatgtattttgaaacggaggga 12807127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 123; E-Value: 6e-63
Query Start/End: Original strand, 1 - 135
Target Start/End: Complemental strand, 25773786 - 25773652
Alignment:
Q  1 aatagaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtacaatt 100  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||    
T  25773786 aataaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttgatttcttggttagtgcaatt 25773687  T
Q  101 tctccaaaatggacatgtattttgaaacggaggga 135  Q
    |||||||||||||||||||||||||||||||||||    
T  25773686 tctccaaaatggacatgtattttgaaacggaggga 25773652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 1 - 135
Target Start/End: Original strand, 30720632 - 30720766
Alignment:
Q  1 aatagaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtacaatt 100  Q
    |||| |||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  30720632 aataaaatgaaataatagatgattaagggtattataaaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtgcaatt 30720731  T
Q  101 tctccaaaatggacatgtattttgaaacggaggga 135  Q
    |||||||||||||||||||||||||||||||||||    
T  30720732 tctccaaaatggacatgtattttgaaacggaggga 30720766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 111; E-Value: 9e-56
Query Start/End: Original strand, 1 - 135
Target Start/End: Original strand, 10285197 - 10285331
Alignment:
Q  1 aatagaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtacaatt 100  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| | |||||    
T  10285197 aataaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttagtttcttggttaatgcaatt 10285296  T
Q  101 tctccaaaatggacatgtattttgaaacggaggga 135  Q
    |||||||||| ||||| ||||||||||||||||||    
T  10285297 tctccaaaatagacatctattttgaaacggaggga 10285331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 1 - 131
Target Start/End: Original strand, 40886750 - 40886880
Alignment:
Q  1 aatagaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtacaatt 100  Q
    |||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| | ||||||||||||| |||||    
T  40886750 aataaaatgaaataataaatgattaagggtattatagaaaatacacacatattttcatcaaaaataacaaaatttattcgatttcttggttagtgcaatt 40886849  T
Q  101 tctccaaaatggacatgtattttgaaacgga 131  Q
    ||||||||||| |||||||||||||||||||    
T  40886850 tctccaaaatgaacatgtattttgaaacgga 40886880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 1 - 131
Target Start/End: Original strand, 36561239 - 36561369
Alignment:
Q  1 aatagaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtacaatt 100  Q
    |||| |||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| | |||||    
T  36561239 aataaaatgaaataataaatggttaaaggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttgattactgcaatt 36561338  T
Q  101 tctccaaaatggacatgtattttgaaacgga 131  Q
    | || ||||||||||||||||||||||||||    
T  36561339 tttctaaaatggacatgtattttgaaacgga 36561369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 1 - 135
Target Start/End: Original strand, 37900764 - 37900898
Alignment:
Q  1 aatagaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtacaatt 100  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||| ||| |||||||||||||| |||||||||||| |||||||||||| | |||||    
T  37900764 aatagaatgaaataataaatggttaagggtattatagaaaacacacatataatttcatcaaaaatatcaaaatttatttagtttcttggttactgcaatt 37900863  T
Q  101 tctccaaaatggacatgtattttgaaacggaggga 135  Q
    |||||||||||||  ||||||||||||||||||||    
T  37900864 tctccaaaatggatgtgtattttgaaacggaggga 37900898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 91; E-Value: 7e-44
Query Start/End: Original strand, 1 - 127
Target Start/End: Original strand, 7277562 - 7277688
Alignment:
Q  1 aatagaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtacaatt 100  Q
    |||| |||||||||||||||| |||| |||||||||||||||||||||||| ||| |||||||||||||||||||||||||||| ||||||| | |||||    
T  7277562 aatataatgaaataataaatggttaaaggtattatagaaaacacacacataatttgatcaaaaataacaaaatttatttggtttattggttactccaatt 7277661  T
Q  101 tctccaaaatggacatgtattttgaaa 127  Q
    |||||||||| ||||||||||||||||    
T  7277662 tctccaaaatagacatgtattttgaaa 7277688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 25683368 - 25683459
Alignment:
Q  1 aatagaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggtta 92  Q
    |||||||| |||||||||||| ||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||    
T  25683368 aatagaataaaataataaatggttaagggtattatagaaaacacacacataattttatcaaaaataacaaaatttatttggtttcttggtta 25683459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 18 - 135
Target Start/End: Complemental strand, 16983380 - 16983261
Alignment:
Q  18 aatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaat--ttatttggtttcttggttagtacaatttctccaaaatggaca 115  Q
    |||| ||||||||||| ||||||| ||||| ||  |||||||||||| || ||||   ||||||||||||||||||| | ||||||||||||||||||||    
T  16983380 aatggttaagggtattgtagaaaaaacacatatcatttcatcaaaaaaaaaaaaaaaattatttggtttcttggttactgcaatttctccaaaatggaca 16983281  T
Q  116 tgtattttgaaacggaggga 135  Q
    ||||||||||||| ||||||    
T  16983280 tgtattttgaaacagaggga 16983261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 1 - 135
Target Start/End: Original strand, 734478 - 734611
Alignment:
Q  1 aatagaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtacaatt 100  Q
    |||||||||||||||||||||| |||||||||||||||||| ||||| | | ||||||||| ||| |||||||||||||| ||  |||||  |   ||||    
T  734478 aatagaatgaaataataaatgagtaagggtattatagaaaa-acacaaagaatttcatcaataatgacaaaatttatttgattctttggtatgagtaatt 734576  T
Q  101 tctccaaaatggacatgtattttgaaacggaggga 135  Q
    ||| ||||||||||| ||||| |||||||||||||    
T  734577 tcttcaaaatggacaagtattgtgaaacggaggga 734611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 1 - 90
Target Start/End: Original strand, 30403101 - 30403191
Alignment:
Q  1 aatagaatgaaataataaatgattaagggtattatagaaaacaca-cacatattttcatcaaaaataacaaaatttatttggtttcttggt 90  Q
    |||| |||||||||| ||||||||||| ||||||||||||| | | |||| | ||||||||||||||||||||||||||||||||||||||    
T  30403101 aataaaatgaaataacaaatgattaagagtattatagaaaaaaaaacacagaatttcatcaaaaataacaaaatttatttggtttcttggt 30403191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 13 - 88
Target Start/End: Original strand, 23098386 - 23098461
Alignment:
Q  13 taataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttg 88  Q
    ||||||||| ||||||||||||||| |||||  |||||| ||||||||||||||||||||||||||| ||||||||    
T  23098386 taataaatggttaagggtattataggaaacatgcacataatttcatcaaaaataacaaaatttatttagtttcttg 23098461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 1 - 135
Target Start/End: Complemental strand, 39071020 - 39070886
Alignment:
Q  1 aatagaatgaaataataaatgattaagggtattatagaaaacacac-acatattttcatcaaaaataacaaaatttatttggtttcttggttagtacaat 99  Q
    |||||||||||||||||||||| |||||||||||||||||| |||| ||| | ||||||||||||| |||| ||||||||| || |||  |  ||  |||    
T  39071020 aatagaatgaaataataaatgagtaagggtattatagaaaaaacacaacaga-tttcatcaaaaatgacaacatttatttgattccttaatatgtgtaat 39070922  T
Q  100 ttctccaaaatggacatgtattttgaaacggaggga 135  Q
    |||| ||||||| ||| ||||| |||||||||||||    
T  39070921 ttcttcaaaatgaacaagtattgtgaaacggaggga 39070886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 1 - 133
Target Start/End: Complemental strand, 11319696 - 11319564
Alignment:
Q  1 aatagaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtacaatt 100  Q
    |||||||||||||||||||||| |||||||||||||||||| | ||| | | |||||| |||||| |||| ||||||||| ||  || ||  ||  ||||    
T  11319696 aatagaatgaaataataaatgagtaagggtattatagaaaaaaaacaaagaatttcataaaaaattacaacatttatttgattcattagtatgtgtaatt 11319597  T
Q  101 tctccaaaatggacatgtattttgaaacggagg 133  Q
    ||| |||||||||||  |||| |||||||||||    
T  11319596 tcttcaaaatggacaaatattgtgaaacggagg 11319564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 96 - 141
Target Start/End: Original strand, 15305223 - 15305268
Alignment:
Q  96 caatttctccaaaatggacatgtattttgaaacggagggattacta 141  Q
    |||||||||||||||||||||||||||||||||||||||| |||||    
T  15305223 caatttctccaaaatggacatgtattttgaaacggagggagtacta 15305268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 1056422 - 1056498
Alignment:
Q  1 aatagaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatt 78  Q
    |||| |||||||||||||||||| ||  ||||||||||||| ||||| | | |||||| |||||||||||||||||||    
T  1056422 aatataatgaaataataaatgatcaatagtattatagaaaa-acacaaagaatttcattaaaaataacaaaatttatt 1056498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 16054249 - 16054173
Alignment:
Q  1 aatagaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttattt 79  Q
    |||||||| |||||||||||| | |||| |||||||||||  | ||||| | |||||| ||||||||||||||||||||    
T  16054249 aatagaataaaataataaatggtcaaggatattatagaaa--aaacacaaaatttcataaaaaataacaaaatttattt 16054173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 206 - 280
Target Start/End: Original strand, 19804486 - 19804560
Alignment:
Q  206 ttaaggaaaatgctaaatagtgcccttggggcattggttaaaagaacaataatgaaaatattgtgttggaaagtg 280  Q
    |||||| ||||||||||||||||||||| |||||||  |||| |||||| |||  |||| |||||||| ||||||    
T  19804486 ttaagggaaatgctaaatagtgcccttgtggcattgaataaaggaacaaaaatagaaattttgtgttgaaaagtg 19804560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 97 - 135
Target Start/End: Complemental strand, 15304863 - 15304825
Alignment:
Q  97 aatttctccaaaatggacatgtattttgaaacggaggga 135  Q
    |||||||| |||||||||||||||||| |||||||||||    
T  15304863 aatttctctaaaatggacatgtattttaaaacggaggga 15304825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 210 - 251
Target Start/End: Complemental strand, 6318627 - 6318586
Alignment:
Q  210 ggaaaatgctaaatagtgcccttggggcattggttaaaagaa 251  Q
    |||||||| |||| ||||||||||||||||||||||| ||||    
T  6318627 ggaaaatgttaaagagtgcccttggggcattggttaagagaa 6318586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 30 - 90
Target Start/End: Complemental strand, 11796559 - 11796499
Alignment:
Q  30 tattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggt 90  Q
    |||||||||| | ||||| | | |||||||||||||||||||||| ||||  |||||||||    
T  11796559 tattatagaacaaacacatagaatttcatcaaaaataacaaaattaatttaatttcttggt 11796499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 123; Significance: 6e-63; HSPs: 40)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 123; E-Value: 6e-63
Query Start/End: Original strand, 1 - 135
Target Start/End: Complemental strand, 13364980 - 13364846
Alignment:
Q  1 aatagaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtacaatt 100  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  13364980 aataaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtgcaatt 13364881  T
Q  101 tctccaaaatggacatgtattttgaaacggaggga 135  Q
    ||||||||||| |||||||||||||||||||||||    
T  13364880 tctccaaaatgaacatgtattttgaaacggaggga 13364846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 1 - 135
Target Start/End: Complemental strand, 198992 - 198858
Alignment:
Q  1 aatagaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtacaatt 100  Q
    |||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||| |||||    
T  198992 aataaaatgaaataataaatgattaagggtattatagaaaacacacatatattttcatcaaaaataacaaaatttatttggtttcttggtcagtgcaatt 198893  T
Q  101 tctccaaaatggacatgtattttgaaacggaggga 135  Q
    |||||||||||||||||||||||||||||||||||    
T  198892 tctccaaaatggacatgtattttgaaacggaggga 198858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 1 - 135
Target Start/End: Original strand, 46694250 - 46694384
Alignment:
Q  1 aatagaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtacaatt 100  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||    
T  46694250 aataaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttgattagtgcaatt 46694349  T
Q  101 tctccaaaatggacatgtattttgaaacggaggga 135  Q
    ||||||||| |||||||||||||||||||||||||    
T  46694350 tctccaaaaaggacatgtattttgaaacggaggga 46694384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 118; E-Value: 6e-60
Query Start/End: Original strand, 6 - 135
Target Start/End: Original strand, 19241813 - 19241942
Alignment:
Q  6 aatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtacaatttctcc 105  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||    
T  19241813 aatgaaataataaatgattaagggtattatagaaaacacacatatattttcatcaaaaataacaaaatttatttggtttcttggttagtgcaatttcacc 19241912  T
Q  106 aaaatggacatgtattttgaaacggaggga 135  Q
    ||||||||||||||||||||||||||||||    
T  19241913 aaaatggacatgtattttgaaacggaggga 19241942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 1 - 135
Target Start/End: Complemental strand, 36881417 - 36881285
Alignment:
Q  1 aatagaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtacaatt 100  Q
    |||| ||||||||||||||| ||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  36881417 aataaaatgaaataataaataattaagggtattatagaaaacacaca--tattttcatcaaaaataacaaaatttatttggtttcttggttagtgcaatt 36881320  T
Q  101 tctccaaaatggacatgtattttgaaacggaggga 135  Q
    |||||||||||||||||||||||||||||||||||    
T  36881319 tctccaaaatggacatgtattttgaaacggaggga 36881285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 111; E-Value: 9e-56
Query Start/End: Original strand, 1 - 131
Target Start/End: Complemental strand, 3383213 - 3383083
Alignment:
Q  1 aatagaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtacaatt 100  Q
    |||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||    
T  3383213 aataaaatgaaataataaatgtttaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttactgcaatt 3383114  T
Q  101 tctccaaaatggacatgtattttgaaacgga 131  Q
    |||||||||||||||| ||||||||||||||    
T  3383113 tctccaaaatggacatatattttgaaacgga 3383083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 111; E-Value: 9e-56
Query Start/End: Original strand, 1 - 135
Target Start/End: Original strand, 23088071 - 23088205
Alignment:
Q  1 aatagaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtacaatt 100  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  23088071 aataaaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtgcaatt 23088170  T
Q  101 tctccaaaatggacatgtattttgaaacggaggga 135  Q
    ||| |||||| ||||| ||||||||||| ||||||    
T  23088171 tcttcaaaatagacatatattttgaaacagaggga 23088205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 111; E-Value: 9e-56
Query Start/End: Original strand, 9 - 135
Target Start/End: Complemental strand, 29375267 - 29375141
Alignment:
Q  9 gaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtacaatttctccaaa 108  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| | |||||||||||||    
T  29375267 gaaataataaatggttaagggtattatagaaaacacacacatattttcatcaaaaataagaaaatttatttggtttcttggttactgcaatttctccaaa 29375168  T
Q  109 atggacatgtattttgaaacggaggga 135  Q
    |||||||||||||||||||||||||||    
T  29375167 atggacatgtattttgaaacggaggga 29375141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 1 - 135
Target Start/End: Complemental strand, 43750274 - 43750140
Alignment:
Q  1 aatagaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtacaatt 100  Q
    ||||||||||||||||||||| ||||| ||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||| | |||||    
T  43750274 aatagaatgaaataataaatggttaagtgtattatagaaaacacacatataatttcatcaaaaataacaaaatttatttggtttcttggttactccaatt 43750175  T
Q  101 tctccaaaatggacatgtattttgaaacggaggga 135  Q
    ||||||||||||||||||||||||||||| |||||    
T  43750174 tctccaaaatggacatgtattttgaaacgaaggga 43750140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 34 - 131
Target Start/End: Original strand, 32835129 - 32835226
Alignment:
Q  34 atagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtacaatttctccaaaatggacatgtattttgaaacgga 131  Q
    |||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||| | ||||||||||||||||||||||||||||||||||||    
T  32835129 atagaaaacacacacataatttcatcaaaaataacaaaatttatttgttttcttggttattgcaatttctccaaaatggacatgtattttgaaacgga 32835226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 17 - 123
Target Start/End: Complemental strand, 13702890 - 13702784
Alignment:
Q  17 aaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtacaatttctccaaaatggacat 116  Q
    ||||| |||| |||||||||||||||| ||| ||| |||||||||||||| ||||||||||||||||||||||||| | ||||||||||||||| | |||    
T  13702890 aaatggttaaaggtattatagaaaacaaacatataatttcatcaaaaatatcaaaatttatttggtttcttggttactgcaatttctccaaaataggcat 13702791  T
Q  117 gtatttt 123  Q
    |||||||    
T  13702790 gtatttt 13702784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 60 - 135
Target Start/End: Original strand, 27707363 - 27707438
Alignment:
Q  60 aaaaataacaaaatttatttggtttcttggttagtacaatttctccaaaatggacatgtattttgaaacggaggga 135  Q
    ||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||| ||||||||||||    
T  27707363 aaaaataacaaaatttatttggtttcttggttactgcaatttctccaaaatggacatgtatttcgaaacggaggga 27707438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 19897067 - 19897152
Alignment:
Q  1 aatagaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttct 86  Q
    ||||||||||||||||||| || |||||||||||||||||| ||||| | | |||||| ||||||||||||||||||||| |||||    
T  19897067 aatagaatgaaataataaaagagtaagggtattatagaaaaaacacaaagaatttcataaaaaataacaaaatttatttgatttct 19897152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 3 - 79
Target Start/End: Complemental strand, 37781072 - 37780996
Alignment:
Q  3 tagaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttattt 79  Q
    ||||||||||||||||||| ||||  ||||||||||||| ||||||| | ||||||||||||||| |||||||||||    
T  37781072 tagaatgaaataataaatggttaatagtattatagaaaaaacacacagaatttcatcaaaaataataaaatttattt 37780996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 85 - 135
Target Start/End: Complemental strand, 12094635 - 12094585
Alignment:
Q  85 cttggttagtacaatttctccaaaatggacatgtattttgaaacggaggga 135  Q
    |||||||| | ||||||||||||||||||||||||||||||||||||||||    
T  12094635 cttggttactgcaatttctccaaaatggacatgtattttgaaacggaggga 12094585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 85 - 135
Target Start/End: Complemental strand, 19911562 - 19911512
Alignment:
Q  85 cttggttagtacaatttctccaaaatggacatgtattttgaaacggaggga 135  Q
    |||||||| | |||||||||||||||| |||||||||||||||||||||||    
T  19911562 cttggttactgcaatttctccaaaatgaacatgtattttgaaacggaggga 19911512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 53 - 135
Target Start/End: Complemental strand, 37293522 - 37293440
Alignment:
Q  53 tttcatcaaaaataacaaaatttatttggtttcttggttagtacaatttctccaaaatggacatgtattttgaaacggaggga 135  Q
    ||||||||||||| |||| ||||||||| || ||||||  ||  ||||||| ||||||||||| ||||| |||||||||||||    
T  37293522 tttcatcaaaaatgacaacatttatttgattccttggtatgtgtaatttcttcaaaatggacaagtattgtgaaacggaggga 37293440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 85 - 135
Target Start/End: Original strand, 44277455 - 44277505
Alignment:
Q  85 cttggttagtacaatttctccaaaatggacatgtattttgaaacggaggga 135  Q
    |||||||| | ||||||||||||||| ||||||||||||||||||||||||    
T  44277455 cttggttactgcaatttctccaaaatagacatgtattttgaaacggaggga 44277505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 1 - 115
Target Start/End: Complemental strand, 54086690 - 54086577
Alignment:
Q  1 aatagaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtacaatt 100  Q
    |||||||||||||||||| ||| |||||||||||||||||| | ||| | | ||||||||| ||| |||| ||||||||| || |||||   ||  ||||    
T  54086690 aatagaatgaaataataa-tgagtaagggtattatagaaaaaatacaaagaatttcatcaataatgacaacatttatttgattccttggcatgtgtaatt 54086592  T
Q  101 tctccaaaatggaca 115  Q
    ||| |||||||||||    
T  54086591 tcttcaaaatggaca 54086577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 10 - 87
Target Start/End: Original strand, 1455297 - 1455374
Alignment:
Q  10 aaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttctt 87  Q
    |||||||||||| | ||| | ||||||||| | ||||| ||| ||| |||||||||||||||||||||||| ||||||    
T  1455297 aaataataaatggtgaagagaattatagaagaaacacaaataattttatcaaaaataacaaaatttatttgatttctt 1455374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 53 - 121
Target Start/End: Original strand, 48820444 - 48820512
Alignment:
Q  53 tttcatcaaaaataacaaaatttatttggtttcttggttagtacaatttctccaaaatggacatgtatt 121  Q
    |||||||||||||||||||||||||||||||| |||| ||    ||||||||||||||  |||||||||    
T  48820444 tttcatcaaaaataacaaaatttatttggtttattggataccgtaatttctccaaaataaacatgtatt 48820512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 1 - 128
Target Start/End: Original strand, 18356007 - 18356134
Alignment:
Q  1 aatagaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtacaatt 100  Q
    ||||||||||||| |||||||| |||||||||||||||||| ||||| | | ||||| ||||| | |||| || |||||  || |||||   ||  ||||    
T  18356007 aatagaatgaaatgataaatgagtaagggtattatagaaaaaacacaaagaatttcaccaaaactgacaacatgtatttaattccttggcatgtgtaatt 18356106  T
Q  101 tctccaaaatggacatgtattttgaaac 128  Q
    | | ||||||||| ||||||| ||||||    
T  18356107 ttttcaaaatggatatgtattgtgaaac 18356134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 69 - 135
Target Start/End: Complemental strand, 48963223 - 48963159
Alignment:
Q  69 aaaatttatttggtttcttggttagtacaatttctccaaaatggacatgtattttgaaacggaggga 135  Q
    |||| ||||||| ||| ||||||||  ||||||||||||||| || |||||||||||||||||||||    
T  48963223 aaaaattatttgatttattggttag--caatttctccaaaatagatatgtattttgaaacggaggga 48963159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 97 - 135
Target Start/End: Original strand, 19912174 - 19912212
Alignment:
Q  97 aatttctccaaaatggacatgtattttgaaacggaggga 135  Q
    |||||||| ||||||||||||||||||||||||||||||    
T  19912174 aatttctctaaaatggacatgtattttgaaacggaggga 19912212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 24064361 - 24064283
Alignment:
Q  1 aatagaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttattt 79  Q
    |||||||| ||||||||||||  |||||||||||||||||| |||||   | ||| || ||| ||||||||||||||||    
T  24064361 aatagaataaaataataaatgggtaagggtattatagaaaaaacacagtgaattttataaaatataacaaaatttattt 24064283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 85 - 135
Target Start/End: Complemental strand, 38805298 - 38805248
Alignment:
Q  85 cttggttagtacaatttctccaaaatggacatgtattttgaaacggaggga 135  Q
    |||||||| | ||||||||| |||||||||||||||||| |||||||||||    
T  38805298 cttggttactgcaatttctctaaaatggacatgtattttaaaacggaggga 38805248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 97 - 135
Target Start/End: Original strand, 38806341 - 38806379
Alignment:
Q  97 aatttctccaaaatggacatgtattttgaaacggaggga 135  Q
    |||||||| ||||||||||||||||||||||||||||||    
T  38806341 aatttctctaaaatggacatgtattttgaaacggaggga 38806379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 209 - 281
Target Start/End: Complemental strand, 32070779 - 32070710
Alignment:
Q  209 aggaaaatgctaaatagtgcccttggggcattggttaaaagaacaataatgaaaatattgtgttggaaagtgg 281  Q
    |||||||||||||| |||| | ||| ||||| ||||||||||||||||||  ||||||||||||| |||||||    
T  32070779 aggaaaatgctaaa-agtgtctttgaggcatcggttaaaagaacaataat--aaatattgtgttgaaaagtgg 32070710  T

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Target: chr3; HSP #29
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 210 - 279
Target Start/End: Original strand, 32385582 - 32385651
Alignment:
Q  210 ggaaaatgctaaatagtgcccttggggcattggttaaaagaacaataatgaaaatattgtgttggaaagt 279  Q
    ||||||||||||| |||| | ||  |||||||||||| |||||||||||   ||||||||||||||||||    
T  32385582 ggaaaatgctaaagagtgtctttaaggcattggttaagagaacaataatagtaatattgtgttggaaagt 32385651  T

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Target: chr3; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 4 - 47
Target Start/End: Complemental strand, 6901698 - 6901655
Alignment:
Q  4 agaatgaaataataaatgattaagggtattatagaaaacacaca 47  Q
    ||||||||||||||||||| ||||||||||| |||||| |||||    
T  6901698 agaatgaaataataaatgagtaagggtattagagaaaaaacaca 6901655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 9 - 72
Target Start/End: Complemental strand, 17755284 - 17755221
Alignment:
Q  9 gaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaa 72  Q
    |||||||||||||||||| | |||||||||||| ||||| |||  ||||| |||||||| ||||    
T  17755284 gaaataataaatgattaaagatattatagaaaaaacacaaataaattcataaaaaataaaaaaa 17755221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 9 - 72
Target Start/End: Complemental strand, 19056604 - 19056541
Alignment:
Q  9 gaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaa 72  Q
    |||||||||||||||||| | |||||||||||| ||||| |||  ||||| |||||||| ||||    
T  19056604 gaaataataaatgattaaagatattatagaaaaaacacaaataaattcataaaaaataaaaaaa 19056541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 97 - 132
Target Start/End: Complemental strand, 44276816 - 44276781
Alignment:
Q  97 aatttctccaaaatggacatgtattttgaaacggag 132  Q
    |||||||| |||||||||||||||||||||||||||    
T  44276816 aatttctctaaaatggacatgtattttgaaacggag 44276781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 10 - 88
Target Start/End: Complemental strand, 44522567 - 44522491
Alignment:
Q  10 aaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttg 88  Q
    |||||||||||| ||||  ||||||||||||| |||||  |  |||||| |||||||| |||||||||||| |||||||    
T  44522567 aaataataaatggttaaaagtattatagaaaaaacaca--tgatttcataaaaaataataaaatttatttgatttcttg 44522491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 97 - 135
Target Start/End: Original strand, 12095423 - 12095461
Alignment:
Q  97 aatttctccaaaatggacatgtattttgaaacggaggga 135  Q
    |||||||| ||||||||||| ||||||||||||||||||    
T  12095423 aatttctctaaaatggacatatattttgaaacggaggga 12095461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 52805166 - 52805244
Alignment:
Q  1 aatagaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttattt 79  Q
    |||| ||| ||||||||||||  |||| ||||||||||||| |  || | | ||||||||||||| |||||||||||||    
T  52805166 aatataataaaataataaatgtgtaagagtattatagaaaaaatgcaaacaatttcatcaaaaatgacaaaatttattt 52805244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 237 - 281
Target Start/End: Original strand, 6822805 - 6822847
Alignment:
Q  237 cattggttaaaagaacaataatgaaaatattgtgttggaaagtgg 281  Q
    |||||||||| ||||||||||  ||||||||||||||||||||||    
T  6822805 cattggttaagagaacaataa--aaaatattgtgttggaaagtgg 6822847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 208 - 281
Target Start/End: Complemental strand, 9189356 - 9189283
Alignment:
Q  208 aaggaaaatgctaaatagtgcccttggggcattggttaaaagaacaataatgaaaatattgtgttggaaagtgg 281  Q
    |||| ||||| |||| ||||||||| |||  ||||||||  ||||||||||  ||||||| |||||||||||||    
T  9189356 aagggaaatgttaaagagtgcccttagggtgttggttaagtgaacaataatagaaatattatgttggaaagtgg 9189283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 9 - 50
Target Start/End: Original strand, 27707136 - 27707177
Alignment:
Q  9 gaaataataaatgattaagggtattatagaaaacacacacat 50  Q
    ||||||||||||| |||||| |||||||||||||||| ||||    
T  27707136 gaaataataaatggttaaggatattatagaaaacacatacat 27707177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 85 - 129
Target Start/End: Complemental strand, 4235803 - 4235760
Alignment:
Q  85 cttggttagtacaatttctccaaaatggacatgtattttgaaacg 129  Q
    |||||||||| ||||||||||||||  ||||||||||||||||||    
T  4235803 cttggttagtgcaatttctccaaaa-cgacatgtattttgaaacg 4235760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0054 (Bit Score: 107; Significance: 2e-53; HSPs: 1)
Name: scaffold0054
Description:

Target: scaffold0054; HSP #1
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 1 - 135
Target Start/End: Complemental strand, 45591 - 45457
Alignment:
Q  1 aatagaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtacaatt 100  Q
    |||||||| |||||||||||| ||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||| || |||||    
T  45591 aatagaataaaataataaatggttaagggtattatagaaaatacacacataatttcatcaaaaataacaaaatttatttggtttcttggttggtgcaatt 45492  T
Q  101 tctccaaaatggacatgtattttgaaacggaggga 135  Q
    ||||||||||| |||||||||||||||||||||||    
T  45491 tctccaaaatgaacatgtattttgaaacggaggga 45457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1770 (Bit Score: 78; Significance: 4e-36; HSPs: 1)
Name: scaffold1770
Description:

Target: scaffold1770; HSP #1
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 1 - 135
Target Start/End: Complemental strand, 299 - 173
Alignment:
Q  1 aatagaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtacaatt 100  Q
    |||| |||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||        ||||| | |||||    
T  299 aataaaatgaaataataaatggttaagggtattatagaaaacacacacatattttcataaaaaataacaaaatttattt--------ggttactgcaatt 208  T
Q  101 tctccaaaatggacatgtattttgaaacggaggga 135  Q
    |||||||| |||| |||||||||||||||||||||    
T  207 tctccaaagtggatatgtattttgaaacggaggga 173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0062 (Bit Score: 72; Significance: 2e-32; HSPs: 1)
Name: scaffold0062
Description:

Target: scaffold0062; HSP #1
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 1 - 123
Target Start/End: Original strand, 405 - 525
Alignment:
Q  1 aatagaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtacaatt 100  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||  || ||| |||||||||||||||||||||||| ||| ||| ||| | |||||    
T  405 aatagaatgaaataataaatgattaagggtattataaaaaacacaca--taattttatcaaaaataacaaaatttatttgattttttgattactgcaatt 502  T
Q  101 tctccaaaatggacatgtatttt 123  Q
    || |||||||| |||||||||||    
T  503 tcgccaaaatgaacatgtatttt 525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056 (Bit Score: 60; Significance: 2e-25; HSPs: 1)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 70961 - 70874
Alignment:
Q  1 aatagaatgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttg 88  Q
    ||||||||||||||||||||| |||||||| ||| |||||| ||||||| | |||||||||||||||||||||||||||| |||||||    
T  70961 aatagaatgaaataataaatggttaagggtgttacagaaaaaacacacagaatttcatcaaaaataacaaaatttatttgatttcttg 70874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025 (Bit Score: 45; Significance: 2e-16; HSPs: 1)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 65303 - 65375
Alignment:
Q  1 aatagaatgaaataataaatgattaagggtattatag-aaaacacacacatattttcatcaaaaataacaaaa 72  Q
    ||||||||||||||||||||| ||||||||||||||| |||| ||||| ||| ||||||||||||||| ||||    
T  65303 aatagaatgaaataataaatggttaagggtattatagaaaaaaacacatataatttcatcaaaaataataaaa 65375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0257 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 2)
Name: scaffold0257
Description:

Target: scaffold0257; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 85 - 135
Target Start/End: Complemental strand, 23520 - 23470
Alignment:
Q  85 cttggttagtacaatttctccaaaatggacatgtattttgaaacggaggga 135  Q
    |||||||| | ||||||||||||||||||||||||||||||||||||||||    
T  23520 cttggttactgcaatttctccaaaatggacatgtattttgaaacggaggga 23470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0257; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 97 - 144
Target Start/End: Original strand, 23872 - 23919
Alignment:
Q  97 aatttctccaaaatggacatgtattttgaaacggagggattactagtt 144  Q
    |||||||| |||||||||||||||||||||||||| ||| || |||||    
T  23872 aatttctctaaaatggacatgtattttgaaacggatggagtaatagtt 23919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0169 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0169
Description:

Target: scaffold0169; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 208 - 253
Target Start/End: Original strand, 8983 - 9028
Alignment:
Q  208 aaggaaaatgctaaatagtgcccttggggcattggttaaaagaaca 253  Q
    |||||||||| |||||||||| |||||| |||||||||||| ||||    
T  8983 aaggaaaatgttaaatagtgctcttgggacattggttaaaataaca 9028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 213 - 280
Target Start/End: Complemental strand, 73569 - 73501
Alignment:
Q  213 aaatgctaaatagtgcccttggggcattggttaaaa-gaacaataatgaaaatattgtgttggaaagtg 280  Q
    |||||||||| |||| || | || |||| ||||||| ||||||||||  ||||||||||||||||||||    
T  73569 aaatgctaaagagtgtccataggacattagttaaaaagaacaataattgaaatattgtgttggaaagtg 73501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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