View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF3308_low_62 (Length: 240)

Name: NF3308_low_62
Description: NF3308
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF3308_low_62
NF3308_low_62
[»] chr6 (60 HSPs)
chr6 (16-218)||(33631745-33631948)
chr6 (73-223)||(13353199-13353350)
chr6 (73-223)||(33796324-33796475)
chr6 (74-203)||(12330134-12330264)
chr6 (73-203)||(8026387-8026518)
chr6 (79-203)||(4868767-4868893)
chr6 (74-203)||(6542898-6543028)
chr6 (83-203)||(33494547-33494668)
chr6 (69-223)||(2736336-2736492)
chr6 (73-203)||(9705018-9705150)
chr6 (73-159)||(4868576-4868663)
chr6 (83-161)||(11721913-11721992)
chr6 (69-171)||(30256807-30256909)
chr6 (118-216)||(7638790-7638888)
chr6 (79-203)||(30256582-30256707)
chr6 (74-153)||(8566964-8567043)
chr6 (83-203)||(19712722-19712845)
chr6 (73-224)||(21690720-21690872)
chr6 (83-217)||(11085589-11085724)
chr6 (73-147)||(13740914-13740989)
chr6 (73-147)||(13746414-13746489)
chr6 (73-203)||(27653215-27653346)
chr6 (74-203)||(6054168-6054298)
chr6 (73-223)||(6400790-6400932)
chr6 (79-159)||(9705258-9705339)
chr6 (73-160)||(19639111-19639199)
chr6 (69-159)||(2736166-2736257)
chr6 (73-147)||(16722818-16722893)
chr6 (85-203)||(24554127-24554245)
chr6 (69-223)||(32290722-32290877)
chr6 (83-203)||(8001504-8001626)
chr6 (74-183)||(13740680-13740790)
chr6 (74-183)||(13746180-13746290)
chr6 (159-217)||(31961028-31961086)
chr6 (69-216)||(3713336-3713484)
chr6 (143-215)||(3921627-3921699)
chr6 (73-160)||(6400618-6400706)
chr6 (69-147)||(2753252-2753331)
chr6 (79-169)||(15082133-15082223)
chr6 (73-159)||(16570157-16570244)
chr6 (69-147)||(17147671-17147750)
chr6 (99-170)||(20373595-20373666)
chr6 (73-147)||(27656456-27656531)
chr6 (79-201)||(30849359-30849482)
chr6 (120-218)||(3680058-3680156)
chr6 (74-159)||(25065093-25065179)
chr6 (70-143)||(28867972-28868046)
chr6 (73-153)||(27772712-27772793)
chr6 (83-203)||(5572571-5572691)
chr6 (74-153)||(12330296-12330375)
chr6 (69-108)||(7638641-7638680)
chr6 (99-153)||(8026628-8026683)
chr6 (79-153)||(12329949-12330024)
chr6 (73-147)||(19712950-19713025)
chr6 (16-50)||(33631571-33631605)
chr6 (149-223)||(34345473-34345546)
chr6 (73-153)||(5572389-5572470)
chr6 (73-153)||(27772944-27773025)
chr6 (119-159)||(4161845-4161885)
chr6 (119-159)||(4223465-4223505)
[»] chr8 (71 HSPs)
chr8 (69-217)||(41790653-41790801)
chr8 (73-223)||(24532356-24532507)
chr8 (79-223)||(20301265-20301410)
chr8 (79-223)||(21087897-21088042)
chr8 (74-217)||(11232370-11232514)
chr8 (73-216)||(39052871-39053015)
chr8 (73-194)||(11232158-11232280)
chr8 (79-203)||(5932139-5932264)
chr8 (70-203)||(4828063-4828197)
chr8 (74-223)||(12317045-12317195)
chr8 (74-203)||(12688071-12688201)
chr8 (117-223)||(31197658-31197763)
chr8 (73-203)||(19256775-19256906)
chr8 (82-223)||(37001233-37001378)
chr8 (74-203)||(8084126-8084256)
chr8 (79-216)||(15042826-15042966)
chr8 (68-160)||(37001457-37001550)
chr8 (80-215)||(37868526-37868662)
chr8 (120-219)||(10614878-10614977)
chr8 (79-203)||(3157514-3157640)
chr8 (83-184)||(16962220-16962322)
chr8 (83-203)||(20094750-20094870)
chr8 (73-176)||(17469816-17469920)
chr8 (69-188)||(29005858-29005978)
chr8 (73-159)||(5931948-5932035)
chr8 (73-159)||(35682780-35682867)
chr8 (86-159)||(27204975-27205049)
chr8 (86-159)||(27205073-27205147)
chr8 (86-159)||(27205171-27205245)
chr8 (73-178)||(34842676-34842782)
chr8 (73-153)||(19256591-19256672)
chr8 (74-169)||(5590357-5590453)
chr8 (82-216)||(8466665-8466801)
chr8 (73-171)||(10884062-10884161)
chr8 (69-160)||(12688301-12688393)
chr8 (73-223)||(16050027-16050178)
chr8 (83-153)||(24075311-24075382)
chr8 (73-143)||(38447442-38447513)
chr8 (120-218)||(10615440-10615538)
chr8 (83-147)||(4828301-4828366)
chr8 (73-153)||(17477063-17477144)
chr8 (73-160)||(18004094-18004182)
chr8 (155-223)||(18004264-18004332)
chr8 (73-159)||(39960189-39960277)
chr8 (73-159)||(42846604-42846692)
chr8 (73-147)||(3157338-3157413)
chr8 (73-147)||(8929015-8929090)
chr8 (73-159)||(10449998-10450085)
chr8 (73-147)||(26800523-26800598)
chr8 (74-203)||(28213058-28213188)
chr8 (67-188)||(36917409-36917531)
chr8 (82-147)||(38475754-38475820)
chr8 (134-203)||(5676011-5676080)
chr8 (150-223)||(7669495-7669568)
chr8 (99-171)||(8716138-8716211)
chr8 (119-200)||(10615114-10615195)
chr8 (118-159)||(31827398-31827439)
chr8 (73-153)||(39743527-39743608)
chr8 (80-215)||(42049629-42049766)
chr8 (118-201)||(6463002-6463086)
chr8 (83-138)||(34843125-34843181)
chr8 (73-147)||(35385822-35385898)
chr8 (116-203)||(38476080-38476168)
chr8 (73-159)||(15042669-15042756)
chr8 (80-158)||(15686040-15686119)
chr8 (85-143)||(16050271-16050329)
chr8 (82-159)||(22638178-22638256)
chr8 (83-203)||(26208203-26208325)
chr8 (153-223)||(35682951-35683021)
chr8 (79-159)||(25325650-25325731)
chr8 (116-153)||(34653192-34653229)
[»] chr7 (77 HSPs)
chr7 (69-203)||(25620130-25620265)
chr7 (69-216)||(28080659-28080806)
chr7 (73-223)||(36277161-36277312)
chr7 (79-183)||(3038059-3038164)
chr7 (73-203)||(29469603-29469734)
chr7 (73-223)||(21861292-21861443)
chr7 (69-217)||(18826429-18826578)
chr7 (83-223)||(10903093-10903234)
chr7 (120-203)||(33834237-33834320)
chr7 (73-203)||(34027391-34027522)
chr7 (120-223)||(36993243-36993346)
chr7 (69-203)||(48661510-48661645)
chr7 (73-223)||(1596592-1596742)
chr7 (73-170)||(48243425-48243523)
chr7 (73-217)||(4886327-4886472)
chr7 (73-195)||(17202177-17202300)
chr7 (74-203)||(26239870-26240001)
chr7 (79-203)||(31892155-31892281)
chr7 (74-159)||(48243060-48243146)
chr7 (79-223)||(4506936-4507081)
chr7 (77-203)||(33996269-33996393)
chr7 (73-168)||(2544437-2544533)
chr7 (73-159)||(6634853-6634940)
chr7 (85-203)||(31257222-31257341)
chr7 (73-159)||(34027625-34027712)
chr7 (74-160)||(36993072-36993159)
chr7 (122-220)||(10882177-10882275)
chr7 (114-200)||(21821846-21821932)
chr7 (73-160)||(21054951-21055039)
chr7 (75-223)||(22574605-22574750)
chr7 (85-183)||(11743038-11743137)
chr7 (73-203)||(31485614-31485745)
chr7 (69-159)||(31892381-31892472)
chr7 (116-171)||(40121911-40121966)
chr7 (74-223)||(2404343-2404493)
chr7 (119-220)||(5871749-5871851)
chr7 (74-147)||(32278896-32278970)
chr7 (73-178)||(40746263-40746369)
chr7 (79-160)||(47710447-47710529)
chr7 (79-160)||(47722103-47722185)
chr7 (73-153)||(29469838-29469919)
chr7 (84-171)||(23796010-23796097)
chr7 (73-147)||(3392980-3393055)
chr7 (73-147)||(21861527-21861602)
chr7 (79-161)||(23796181-23796264)
chr7 (73-203)||(26562028-26562159)
chr7 (80-220)||(5871893-5872033)
chr7 (73-159)||(43688159-43688245)
chr7 (118-159)||(7786253-7786294)
chr7 (114-171)||(47955334-47955391)
chr7 (114-171)||(47955415-47955472)
chr7 (114-171)||(47955496-47955553)
chr7 (114-171)||(47955577-47955634)
chr7 (114-171)||(47955658-47955715)
chr7 (114-171)||(47955739-47955796)
chr7 (86-153)||(14540957-14541025)
chr7 (80-159)||(15317557-15317637)
chr7 (99-170)||(30727343-30727415)
chr7 (80-171)||(47849576-47849668)
chr7 (116-171)||(6782903-6782958)
chr7 (83-153)||(10882011-10882081)
chr7 (79-153)||(11211684-11211758)
chr7 (142-189)||(20305358-20305405)
chr7 (74-160)||(36276989-36277076)
chr7 (120-203)||(44874533-44874616)
chr7 (69-158)||(6001435-6001525)
chr7 (73-154)||(31485429-31485510)
chr7 (73-145)||(32879627-32879701)
chr7 (72-153)||(44874351-44874433)
chr7 (82-202)||(48417470-48417592)
chr7 (79-147)||(1596832-1596901)
chr7 (73-160)||(4268052-4268141)
chr7 (74-159)||(5522878-5522966)
chr7 (134-203)||(9689055-9689124)
chr7 (73-153)||(40746496-40746577)
chr7 (74-157)||(2401359-2401443)
chr7 (74-157)||(2544216-2544300)
[»] chr1 (76 HSPs)
chr1 (73-223)||(26176906-26177057)
chr1 (69-223)||(25145655-25145810)
chr1 (73-223)||(4112941-4113092)
chr1 (73-223)||(16162931-16163082)
chr1 (119-218)||(51460382-51460481)
chr1 (74-223)||(2859562-2859712)
chr1 (75-223)||(4098338-4098486)
chr1 (79-223)||(27413351-27413496)
chr1 (116-223)||(35772071-35772178)
chr1 (82-223)||(39348287-39348429)
chr1 (69-204)||(8870864-8871000)
chr1 (69-159)||(40079146-40079237)
chr1 (74-221)||(26173393-26173541)
chr1 (119-203)||(30369880-30369964)
chr1 (74-159)||(20208527-20208611)
chr1 (121-218)||(35892103-35892200)
chr1 (73-196)||(17452790-17452914)
chr1 (73-160)||(35772262-35772350)
chr1 (79-218)||(38668129-38668269)
chr1 (69-159)||(26177137-26177228)
chr1 (74-196)||(51589805-51589928)
chr1 (80-201)||(26346926-26347047)
chr1 (74-203)||(51588991-51589121)
chr1 (74-170)||(3169765-3169862)
chr1 (73-153)||(17452684-17452765)
chr1 (114-218)||(33156773-33156878)
chr1 (74-147)||(39808465-39808538)
chr1 (79-159)||(52650770-52650851)
chr1 (118-198)||(17402626-17402706)
chr1 (74-216)||(38733151-38733293)
chr1 (118-172)||(29265997-29266051)
chr1 (125-203)||(51460005-51460083)
chr1 (74-171)||(51589225-51589323)
chr1 (153-223)||(52961426-52961496)
chr1 (74-179)||(9499245-9499350)
chr1 (116-185)||(25255353-25255421)
chr1 (74-170)||(35892290-35892387)
chr1 (142-182)||(12489171-12489211)
chr1 (80-171)||(40316037-40316129)
chr1 (74-153)||(52961581-52961661)
chr1 (69-223)||(7307715-7307870)
chr1 (82-195)||(11234223-11234338)
chr1 (73-147)||(25137314-25137389)
chr1 (164-223)||(25713248-25713307)
chr1 (141-216)||(32783223-32783298)
chr1 (73-182)||(3477152-3477262)
chr1 (80-160)||(4098161-4098242)
chr1 (150-223)||(4112710-4112783)
chr1 (100-203)||(12376627-12376732)
chr1 (84-160)||(33157230-33157307)
chr1 (80-147)||(31181524-31181592)
chr1 (99-162)||(31432226-31432290)
chr1 (73-147)||(2859403-2859478)
chr1 (114-157)||(11924961-11925004)
chr1 (83-145)||(12244975-12245038)
chr1 (73-147)||(15986344-15986419)
chr1 (73-147)||(21626350-21626425)
chr1 (74-160)||(25145483-25145570)
chr1 (69-147)||(26865369-26865448)
chr1 (116-223)||(31496306-31496413)
chr1 (73-147)||(38080603-38080677)
chr1 (73-159)||(42586438-42586524)
chr1 (85-171)||(50882674-50882761)
chr1 (69-159)||(16163161-16163254)
chr1 (74-159)||(38733381-38733467)
chr1 (73-145)||(855979-856052)
chr1 (120-169)||(2120123-2120172)
chr1 (119-203)||(12325514-12325599)
chr1 (73-153)||(17402712-17402793)
chr1 (134-171)||(23436562-23436599)
chr1 (83-159)||(41035826-41035903)
chr1 (74-125)||(17412335-17412387)
chr1 (69-97)||(19484158-19484186)
chr1 (80-147)||(31004448-31004516)
chr1 (80-159)||(42351859-42351939)
chr1 (80-147)||(52907389-52907457)
[»] chr2 (57 HSPs)
chr2 (69-223)||(2029763-2029918)
chr2 (73-223)||(14466345-14466496)
chr2 (81-203)||(40379399-40379522)
chr2 (114-215)||(21383612-21383714)
chr2 (118-203)||(93309-93394)
chr2 (74-203)||(2324239-2324369)
chr2 (116-217)||(16419309-16419410)
chr2 (134-223)||(40149171-40149260)
chr2 (81-203)||(15124738-15124861)
chr2 (73-203)||(17719398-17719529)
chr2 (74-203)||(5509078-5509208)
chr2 (79-216)||(33606231-33606369)
chr2 (79-203)||(36352114-36352239)
chr2 (69-162)||(2029998-2030092)
chr2 (74-159)||(16419501-16419587)
chr2 (69-216)||(14927096-14927245)
chr2 (79-199)||(24395868-24395988)
chr2 (83-171)||(28407780-28407869)
chr2 (68-159)||(5711438-5711530)
chr2 (73-203)||(5711629-5711761)
chr2 (83-153)||(19191615-19191686)
chr2 (69-171)||(37840331-37840434)
chr2 (81-159)||(40379208-40379287)
chr2 (118-203)||(93582-93667)
chr2 (74-203)||(17525289-17525423)
chr2 (70-170)||(17854917-17855018)
chr2 (81-153)||(40149008-40149081)
chr2 (69-199)||(32356380-32356510)
chr2 (83-157)||(37769944-37770019)
chr2 (74-159)||(15124547-15124633)
chr2 (73-172)||(27036401-27036498)
chr2 (73-153)||(2324472-2324553)
chr2 (83-171)||(29718336-29718425)
chr2 (73-145)||(32884105-32884178)
chr2 (84-159)||(17719575-17719651)
chr2 (74-159)||(5851680-5851767)
chr2 (69-223)||(37812438-37812588)
chr2 (116-170)||(10571012-10571066)
chr2 (117-218)||(13210569-13210671)
chr2 (73-138)||(16533545-16533611)
chr2 (66-159)||(19570973-19571067)
chr2 (134-223)||(2375098-2375187)
chr2 (68-160)||(19544369-19544461)
chr2 (143-218)||(21840151-21840226)
chr2 (155-223)||(34893506-34893574)
chr2 (70-157)||(40718208-40718296)
chr2 (83-157)||(5509321-5509396)
chr2 (74-196)||(15464768-15464891)
chr2 (69-147)||(17525110-17525189)
chr2 (73-167)||(27897597-27897691)
chr2 (135-194)||(31700936-31700995)
chr2 (74-159)||(25082536-25082622)
chr2 (74-147)||(42639625-42639699)
chr2 (79-147)||(12343761-12343830)
chr2 (150-218)||(19571133-19571202)
chr2 (163-203)||(16533401-16533441)
chr2 (74-196)||(21591780-21591903)
[»] chr5 (71 HSPs)
chr5 (79-223)||(9368599-9368744)
chr5 (74-203)||(15480321-15480451)
chr5 (74-201)||(24528539-24528667)
chr5 (69-223)||(24531593-24531748)
chr5 (73-203)||(41666947-41667079)
chr5 (79-223)||(6919364-6919508)
chr5 (79-203)||(6413612-6413737)
chr5 (83-223)||(25258236-25258377)
chr5 (83-223)||(25322026-25322167)
chr5 (74-189)||(2063703-2063818)
chr5 (73-203)||(24346691-24346823)
chr5 (116-203)||(18333654-18333741)
chr5 (121-223)||(43117694-43117796)
chr5 (117-218)||(32908892-32908993)
chr5 (125-223)||(17150403-17150501)
chr5 (73-171)||(8081100-8081200)
chr5 (73-203)||(24270060-24270191)
chr5 (69-216)||(38731780-38731928)
chr5 (69-147)||(95277-95356)
chr5 (73-203)||(8098316-8098446)
chr5 (73-203)||(21209876-21210007)
chr5 (73-159)||(41666756-41666843)
chr5 (134-203)||(95456-95525)
chr5 (73-159)||(19705901-19705988)
chr5 (69-159)||(28510085-28510176)
chr5 (74-171)||(1564554-1564652)
chr5 (69-194)||(20225035-20225161)
chr5 (73-145)||(42295577-42295650)
chr5 (73-165)||(15480555-15480650)
chr5 (69-143)||(6413441-6413516)
chr5 (85-202)||(13296683-13296800)
chr5 (140-218)||(16704658-16704736)
chr5 (74-147)||(18333476-18333550)
chr5 (145-215)||(20510819-20510889)
chr5 (74-178)||(24487625-24487730)
chr5 (73-153)||(27132998-27133079)
chr5 (68-202)||(6637595-6637731)
chr5 (83-153)||(7607602-7607673)
chr5 (69-147)||(17352446-17352525)
chr5 (90-160)||(25258092-25258163)
chr5 (90-160)||(25321882-25321953)
chr5 (85-203)||(29909676-29909795)
chr5 (79-202)||(30770226-30770345)
chr5 (74-160)||(38976932-38977019)
chr5 (82-147)||(7369731-7369797)
chr5 (118-203)||(26137299-26137385)
chr5 (74-147)||(37782061-37782135)
chr5 (79-147)||(9368834-9368903)
chr5 (117-170)||(13701056-13701109)
chr5 (117-220)||(17423807-17423911)
chr5 (73-160)||(24346499-24346587)
chr5 (80-146)||(170563-170630)
chr5 (69-108)||(3859359-3859398)
chr5 (74-160)||(13296891-13296978)
chr5 (175-218)||(15590039-15590082)
chr5 (83-197)||(19522095-19522210)
chr5 (73-159)||(20510641-20510728)
chr5 (116-182)||(14314655-14314721)
chr5 (79-160)||(21306891-21306973)
chr5 (79-160)||(21314729-21314811)
chr5 (73-142)||(30758315-30758385)
chr5 (69-142)||(30770065-30770139)
chr5 (74-147)||(37656948-37657022)
chr5 (80-144)||(60092-60157)
chr5 (83-147)||(8287810-8287874)
chr5 (69-153)||(16707030-16707115)
chr5 (80-144)||(17899474-17899539)
chr5 (73-161)||(43117880-43117969)
chr5 (119-223)||(7133945-7134048)
chr5 (163-203)||(8081304-8081344)
chr5 (73-160)||(24269869-24269956)
[»] chr4 (78 HSPs)
chr4 (69-223)||(22231243-22231398)
chr4 (73-223)||(40717376-40717527)
chr4 (73-218)||(34357970-34358116)
chr4 (69-223)||(52559561-52559718)
chr4 (73-203)||(35788657-35788789)
chr4 (73-203)||(50543520-50543653)
chr4 (80-203)||(7926333-7926457)
chr4 (85-203)||(12869218-12869337)
chr4 (69-223)||(35796912-35797067)
chr4 (70-203)||(1518159-1518293)
chr4 (73-218)||(35819068-35819214)
chr4 (73-218)||(53814869-53815015)
chr4 (134-223)||(4905671-4905760)
chr4 (73-201)||(11036703-11036832)
chr4 (74-204)||(5846145-5846276)
chr4 (120-223)||(36686076-36686179)
chr4 (73-171)||(53828510-53828609)
chr4 (71-223)||(30565968-30566122)
chr4 (82-171)||(35609698-35609788)
chr4 (74-171)||(50543317-50543415)
chr4 (45-159)||(22863441-22863559)
chr4 (116-223)||(4645684-4645791)
chr4 (114-201)||(6666592-6666679)
chr4 (73-171)||(21498352-21498451)
chr4 (73-159)||(22231072-22231159)
chr4 (73-159)||(22845446-22845533)
chr4 (73-159)||(35788892-35788979)
chr4 (87-216)||(24513301-24513431)
chr4 (137-223)||(28245696-28245782)
chr4 (83-203)||(9685406-9685527)
chr4 (73-153)||(21498793-21498874)
chr4 (73-145)||(28245539-28245612)
chr4 (79-162)||(5398472-5398555)
chr4 (117-201)||(22445495-22445579)
chr4 (116-203)||(40716575-40716663)
chr4 (116-203)||(14783142-14783229)
chr4 (84-170)||(17111573-17111659)
chr4 (73-159)||(22827536-22827623)
chr4 (73-171)||(25052850-25052949)
chr4 (134-217)||(30530103-30530186)
chr4 (73-147)||(39902574-39902649)
chr4 (69-159)||(52559798-52559889)
chr4 (83-216)||(6218212-6218346)
chr4 (73-146)||(9279225-9279299)
chr4 (73-153)||(53814679-53814760)
chr4 (69-161)||(2516195-2516286)
chr4 (73-144)||(53828303-53828375)
chr4 (70-153)||(54054810-54054894)
chr4 (83-153)||(9685640-9685711)
chr4 (73-147)||(21684996-21685071)
chr4 (74-203)||(21646456-21646586)
chr4 (121-171)||(52827412-52827462)
chr4 (119-203)||(8902672-8902757)
chr4 (73-153)||(20821971-20822052)
chr4 (120-203)||(4464341-4464425)
chr4 (129-217)||(24226589-24226677)
chr4 (163-223)||(27634251-27634311)
chr4 (120-159)||(7926604-7926643)
chr4 (155-218)||(9908771-9908834)
chr4 (69-112)||(32333957-32334000)
chr4 (69-108)||(40717257-40717296)
chr4 (74-147)||(5398223-5398296)
chr4 (121-167)||(23209888-23209934)
chr4 (177-223)||(25324204-25324250)
chr4 (79-132)||(28246111-28246165)
chr4 (73-142)||(31254423-31254493)
chr4 (69-161)||(11036508-11036601)
chr4 (134-203)||(13555432-13555501)
chr4 (79-147)||(35796753-35796822)
chr4 (79-167)||(37836084-37836173)
chr4 (118-159)||(41187931-41187972)
chr4 (82-147)||(50870492-50870557)
chr4 (120-173)||(52827468-52827521)
chr4 (134-203)||(54054993-54055062)
chr4 (73-140)||(12869047-12869115)
chr4 (120-196)||(25323995-25324071)
chr4 (117-189)||(32002366-32002438)
chr4 (84-203)||(43742998-43743118)
[»] scaffold0692 (2 HSPs)
scaffold0692 (74-223)||(5689-5839)
scaffold0692 (79-159)||(5543-5624)
[»] chr3 (65 HSPs)
chr3 (73-203)||(54567890-54568021)
chr3 (82-223)||(4155331-4155473)
chr3 (43-195)||(54368481-54368637)
chr3 (73-223)||(20327784-20327935)
chr3 (73-203)||(1723031-1723162)
chr3 (73-218)||(35038368-35038514)
chr3 (73-203)||(11589783-11589914)
chr3 (74-219)||(49629604-49629750)
chr3 (69-216)||(12930069-12930218)
chr3 (43-203)||(16239556-16239721)
chr3 (73-203)||(16926904-16927035)
chr3 (120-217)||(26272265-26272362)
chr3 (73-163)||(20327609-20327700)
chr3 (83-217)||(45828027-45828162)
chr3 (74-169)||(22729099-22729195)
chr3 (73-159)||(4155557-4155644)
chr3 (80-217)||(13574861-13575000)
chr3 (73-163)||(20303059-20303150)
chr3 (73-159)||(35038193-35038280)
chr3 (74-170)||(39269330-39269427)
chr3 (73-160)||(8018966-8019054)
chr3 (116-203)||(20303340-20303427)
chr3 (73-171)||(45138958-45139057)
chr3 (80-153)||(50052544-50052619)
chr3 (73-178)||(9272959-9273065)
chr3 (79-159)||(50083079-50083161)
chr3 (74-170)||(17001409-17001506)
chr3 (155-223)||(22775569-22775638)
chr3 (79-215)||(29215758-29215894)
chr3 (117-209)||(8142596-8142688)
chr3 (74-157)||(9273194-9273278)
chr3 (68-159)||(17001241-17001333)
chr3 (70-153)||(18757837-18757921)
chr3 (69-160)||(39620320-39620412)
chr3 (79-153)||(472065-472140)
chr3 (73-171)||(17638233-17638331)
chr3 (79-161)||(31317233-31317315)
chr3 (69-159)||(31317460-31317551)
chr3 (80-158)||(45828251-45828330)
chr3 (99-160)||(24866221-24866283)
chr3 (118-203)||(26753476-26753561)
chr3 (83-147)||(27670403-27670468)
chr3 (116-223)||(33640087-33640195)
chr3 (118-161)||(27086634-27086677)
chr3 (69-179)||(29575869-29575980)
chr3 (152-223)||(34659172-34659243)
chr3 (81-202)||(39620099-39620221)
chr3 (69-147)||(43781577-43781656)
chr3 (79-153)||(45138807-45138882)
chr3 (114-152)||(1353488-1353526)
chr3 (79-147)||(13741112-13741182)
chr3 (74-171)||(23708211-23708309)
chr3 (74-171)||(23726667-23726765)
chr3 (74-171)||(23745123-23745221)
chr3 (74-171)||(24063648-24063746)
chr3 (73-115)||(30138062-30138104)
chr3 (73-115)||(30147613-30147655)
chr3 (74-147)||(38791461-38791535)
chr3 (73-157)||(6487334-6487419)
chr3 (116-153)||(13574689-13574726)
chr3 (80-132)||(27484851-27484904)
chr3 (163-203)||(19954407-19954447)
chr3 (163-203)||(24866132-24866172)
chr3 (69-168)||(30179698-30179798)
chr3 (121-201)||(37246810-37246890)
[»] scaffold0519 (2 HSPs)
scaffold0519 (74-217)||(1915-2059)
scaffold0519 (73-147)||(2149-2224)
[»] scaffold0129 (1 HSPs)
scaffold0129 (74-223)||(14302-14452)
[»] scaffold0092 (1 HSPs)
scaffold0092 (79-203)||(5659-5784)
[»] scaffold0045 (1 HSPs)
scaffold0045 (80-223)||(41141-41284)
[»] scaffold0048 (2 HSPs)
scaffold0048 (73-203)||(81840-81971)
scaffold0048 (114-147)||(82116-82149)
[»] scaffold0400 (1 HSPs)
scaffold0400 (73-223)||(3842-3994)
[»] scaffold0365 (1 HSPs)
scaffold0365 (73-223)||(4486-4638)
[»] scaffold0334 (1 HSPs)
scaffold0334 (73-153)||(4434-4515)
[»] scaffold0766 (1 HSPs)
scaffold0766 (74-153)||(6273-6353)
[»] scaffold0005 (2 HSPs)
scaffold0005 (116-203)||(56501-56588)
scaffold0005 (74-159)||(288656-288742)
[»] scaffold0481 (1 HSPs)
scaffold0481 (70-171)||(3458-3560)
[»] scaffold0047 (1 HSPs)
scaffold0047 (79-203)||(12651-12776)
[»] scaffold0542 (1 HSPs)
scaffold0542 (173-217)||(5728-5772)
[»] scaffold0181 (1 HSPs)
scaffold0181 (100-159)||(20964-21024)
[»] scaffold0027 (1 HSPs)
scaffold0027 (69-159)||(121547-121639)


Alignment Details
Target: chr6 (Bit Score: 132; Significance: 1e-68; HSPs: 60)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 16 - 218
Target Start/End: Complemental strand, 33631948 - 33631745
Alignment:
Q  16 caagggataaagaattagtattttgtaagtgttaagagtctcacatcct-gataatgacctgataatgtgtttataagtgggaacaatcctcacttcata 114  Q
    ||||||||||||||||||||||||||||||||||||| |||||     | | | ||||||||| |||||||||||||||||||||||||||||| |||||    
T  33631948 caagggataaagaattagtattttgtaagtgttaagaatctcatcggataggtgatgacctgacaatgtgtttataagtgggaacaatcctcacctcata 33631849  T
Q  115 accggttttgtggggttgagttaggcccaaccatgatttttaagatgatatcagagcatcttcaagatctattgggccacctgctatcaaatttctgcta 214  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||| |||||| |||||  |||||||||    
T  33631848 accggttttgtggggttgagttaggtccaaccatgatttttaagatgatatcagagcatctccaagatctattgggtcacctgatatcaggtttctgcta 33631749  T
Q  215 tcgg 218  Q
    ||||    
T  33631748 tcgg 33631745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 73 - 223
Target Start/End: Original strand, 13353199 - 13353350
Alignment:
Q  73 cctgataatgtgtttataagtgggaacaatcctcacttcataa-ccggttttgtggggttgagttaggcccaaccatgatttttaagatgatatcagagc 171  Q
    ||||| ||||||||||||||||||  |||||||||| | | || ||||||||||||||||| ||||||||||||||  |||| ||||||| |||||||||    
T  13353199 cctgacaatgtgtttataagtgggggcaatcctcaccttacaagccggttttgtggggttgtgttaggcccaaccaccatttctaagatggtatcagagc 13353298  T
Q  172 atcttcaagatctattgggccacctgctatcaaatttctgctatcggaccac 223  Q
     ||| ||||||| ||||||||||||| |||||  |||| |||||||| ||||    
T  13353299 ctctccaagatccattgggccacctgttatcaggtttccgctatcgggccac 13353350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 73 - 223
Target Start/End: Original strand, 33796324 - 33796475
Alignment:
Q  73 cctgataatgtgtttataagtgggaacaatcctcacttcataa-ccggttttgtggggttgagttaggcccaaccatgatttttaagatgatatcagagc 171  Q
    ||||| ||||||||||||||||||  |||||||||| | | || ||||||||||||||||| ||||||||||||||  |||| ||||||| |||||||||    
T  33796324 cctgacaatgtgtttataagtgggggcaatcctcaccttacaagccggttttgtggggttgtgttaggcccaaccaccatttctaagatggtatcagagc 33796423  T
Q  172 atcttcaagatctattgggccacctgctatcaaatttctgctatcggaccac 223  Q
     ||| ||||||| ||||||||||||| |||||  |||| |||||||| ||||    
T  33796424 ctctccaagatccattgggccacctgttatcaggtttccgctatcgggccac 33796475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 74 - 203
Target Start/End: Complemental strand, 12330264 - 12330134
Alignment:
Q  74 ctgataatgtgtttataagtgggaacaatcctcacttcataa-ccggttttgtggggttgagttaggcccaaccatgatttttaagatgatatcagagca 172  Q
    |||| ||||||||||||||||||  ||| |||||| ||| || ||||||||||| ||||| |||||||||||||| ||||| ||| ||| |||||||||     
T  12330264 ctgacaatgtgtttataagtgggggcaaccctcacctcacaagccggttttgtgaggttgtgttaggcccaaccacgatttctaatatggtatcagagcc 12330165  T
Q  173 tcttcaagatctattgggccacctgctatca 203  Q
    ||| ||||||| |||||||||||||||||||    
T  12330164 tctccaagatccattgggccacctgctatca 12330134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 73 - 203
Target Start/End: Original strand, 8026387 - 8026518
Alignment:
Q  73 cctgataatgtgtttataagtgggaacaatcctcacttcataa-ccggttttgtggggttgagttaggcccaaccatgatttttaagatgatatcagagc 171  Q
    ||||| ||| ||||||||||||||  |||||||||| ||| || ||||||||||||||||| |||||||||||||| ||||| ||| ||| |||||||||    
T  8026387 cctgacaatttgtttataagtgggggcaatcctcacctcacaagccggttttgtggggttgtgttaggcccaaccacgatttctaatatggtatcagagc 8026486  T
Q  172 atcttcaagatctattgggccacctgctatca 203  Q
     |||||| ||| | |||||||||||| |||||    
T  8026487 ctcttcacgatttgttgggccacctgttatca 8026518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 79 - 203
Target Start/End: Complemental strand, 4868893 - 4868767
Alignment:
Q  79 aatgtgtttataagtgggaacaatcctcacttcataa-ccggttttgtggggttgagttaggcccaaccatgatttttaagatgatatcagagcat-ctt 176  Q
    ||||||||||||||||||  |||||||||| ||| || ||||||||||||||||| |||||||||||||| ||||| ||||||| ||||||||| | ||     
T  4868893 aatgtgtttataagtgggggcaatcctcacctcacaagccggttttgtggggttgtgttaggcccaaccacgatttctaagatggtatcagagcctcctc 4868794  T
Q  177 caagatctattgggccacctgctatca 203  Q
    |||||||   |||||||||||||||||    
T  4868793 caagatccgctgggccacctgctatca 4868767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 74 - 203
Target Start/End: Complemental strand, 6543028 - 6542898
Alignment:
Q  74 ctgataatgtgtttataagtgggaacaatcctcacttcataa-ccggttttgtggggttgagttaggcccaaccatgatttttaagatgatatcagagca 172  Q
    |||| ||||||||||||||||||  ||||| |||| ||| || ||||||||||||||||| ||||| |||||||| |||||  |||||| |||||||||     
T  6543028 ctgacaatgtgtttataagtgggggcaatcatcacctcagaagccggttttgtggggttgtgttagacccaaccacgatttcaaagatggtatcagagcc 6542929  T
Q  173 tcttcaagatctattgggccacctgctatca 203  Q
    ||||||||||| |||||| ||| ||||||||    
T  6542928 tcttcaagatccattgggtcacttgctatca 6542898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 83 - 203
Target Start/End: Original strand, 33494547 - 33494668
Alignment:
Q  83 tgtttataagtgggaacaatcctcacttcataa-ccggttttgtggggttgagttaggcccaaccatgatttttaagatgatatcagagcatcttcaaga 181  Q
    ||||||||||||||  |||||||||| ||| || ||||||||||||||||| ||||||||||||||  |||| ||||||| ||||||| | ||||| |||    
T  33494547 tgtttataagtgggggcaatcctcacctcacaagccggttttgtggggttgtgttaggcccaaccaccatttctaagatggtatcagaacctcttcgaga 33494646  T
Q  182 tctattgggccacctgctatca 203  Q
    || |||||| ||||||||||||    
T  33494647 tccattgggtcacctgctatca 33494668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 69 - 223
Target Start/End: Complemental strand, 2736492 - 2736336
Alignment:
Q  69 atgacctgataatgtgtttataagtgggaacaatcctcacttcataac-cggttttgtggggttgagttaggcccaaccatgatttttaagatgatatca 167  Q
    ||||||||||||||||||||||||||||  |||| ||||| ||| ||  ||||||||| || ||| |||| ||| ||||| ||||| ||| |||||||||    
T  2736492 atgacctgataatgtgtttataagtgggggcaattctcacatcacaagtcggttttgttggattgtgttaagcctaaccacgatttctaaaatgatatca 2736393  T
Q  168 gagcatc-ttcaagatctattgggccacctgctatcaaatttctgctatcggaccac 223  Q
    |||| |  ||||||||||||||||||||||||||| |  |||| | |||||||||||    
T  2736392 gagcctgattcaagatctattgggccacctgctattaggtttccgttatcggaccac 2736336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 73 - 203
Target Start/End: Original strand, 9705018 - 9705150
Alignment:
Q  73 cctgataatgtgtttataagtgggaacaatcctcacttcataac-cggttttgtggggttgagttaggcccaaccatgatttttaagatgatatcagagc 171  Q
    ||||| ||||||||||||||||||  ||||| |||| ||| ||  |||||||||||||||| ||||||||||||||  |||| ||||||| |||||||||    
T  9705018 cctgacaatgtgtttataagtgggggcaatcatcacctcacaagtcggttttgtggggttgtgttaggcccaaccaccatttctaagatggtatcagagc 9705117  T
Q  172 at-cttcaagatctattgggccacctgctatca 203  Q
     | || |||||| | ||||||||||||||||||    
T  9705118 ctcctccaagatttgttgggccacctgctatca 9705150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 73 - 159
Target Start/End: Complemental strand, 4868663 - 4868576
Alignment:
Q  73 cctgataatgtgtttataagtgggaacaatcctcacttcataa-ccggttttgtggggttgagttaggcccaaccatgatttttaaga 159  Q
    ||||| ||||||||||||||||||  |||||||||| ||| || ||||||||||||||||| |||||||||||||| ||||| |||||    
T  4868663 cctgacaatgtgtttataagtgggggcaatcctcacctcacaagccggttttgtggggttgtgttaggcccaaccacgatttctaaga 4868576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 83 - 161
Target Start/End: Original strand, 11721913 - 11721992
Alignment:
Q  83 tgtttataagtgggaacaatcctcacttcataa-ccggttttgtggggttgagttaggcccaaccatgatttttaagatg 161  Q
    ||||||||||||||  |||||||||| |||||| ||||||||||||||||| |||||||||||||| ||||| |||||||    
T  11721913 tgtttataagtgggggcaatcctcacctcataagccggttttgtggggttgtgttaggcccaaccacgatttctaagatg 11721992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 69 - 171
Target Start/End: Original strand, 30256807 - 30256909
Alignment:
Q  69 atgacctgataatgtgtttataagtgggaacaatcctcacttcataa-ccggttttgtggggttgagttaggcccaaccatgatttttaagatgatatca 167  Q
    ||||||||| ||| ||||||||||||||  |||||||||| ||| || ||||||||||||||||| |||||||||||||| ||||| ||| ||| |||||    
T  30256807 atgacctgacaatatgtttataagtgggg-caatcctcacctcacaagccggttttgtggggttgtgttaggcccaaccacgatttctaatatggtatca 30256905  T
Q  168 gagc 171  Q
    ||||    
T  30256906 gagc 30256909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 118 - 216
Target Start/End: Complemental strand, 7638888 - 7638790
Alignment:
Q  118 ggttttgtggggttgagttaggcccaaccatgatttttaagatgatatcagagcatcttcaagatctattgggccacctgctatcaaatttctgctatc 216  Q
    ||||||||| ||||| |||||| ||||| ||||||| ||||| ||||||||||| ||| |||||||||||||  ||||||||||||  |||| ||||||    
T  7638888 ggttttgtgcggttgtgttaggtccaactatgatttctaagaagatatcagagcttctccaagatctattggatcacctgctatcaggtttccgctatc 7638790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 79 - 203
Target Start/End: Original strand, 30256582 - 30256707
Alignment:
Q  79 aatgtgtttataagtgggaacaatcctcacttcataa-ccggttttgtggggttgagttaggcccaaccatgatttttaagatgatatcagagcatcttc 177  Q
    ||||||||||||| ||||  |||||||||  ||| || ||||||||||||||||| |||||||||||||| ||||| |||| || ||||||||| | | |    
T  30256582 aatgtgtttataactgggggcaatcctcaactcacaaaccggttttgtggggttgtgttaggcccaaccacgatttctaaggtggtatcagagcctttcc 30256681  T
Q  178 aagatctattgggccacctgctatca 203  Q
    || ||| |||||||| | ||||||||    
T  30256682 aaaatccattgggccgcatgctatca 30256707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 74 - 153
Target Start/End: Complemental strand, 8567043 - 8566964
Alignment:
Q  74 ctgataatgtgtttataagtgggaacaatcctcacttcataa-ccggttttgtggggttgagttaggcccaaccatgattt 153  Q
    |||| ||||||||||||||||||| |||||||||| ||| || ||||||||||||||||| |||||||||||||| |||||    
T  8567043 ctgacaatgtgtttataagtggga-caatcctcacctcacaaaccggttttgtggggttgtgttaggcccaaccacgattt 8566964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 83 - 203
Target Start/End: Original strand, 19712722 - 19712845
Alignment:
Q  83 tgtttataagtgggaacaatcctcacttcataa-ccggttttgtggggttgagt--taggcccaaccatgatttttaagatgatatcagagcatcttcaa 179  Q
    ||||||||||||||  |||||||||| ||| || ||||||||||||||||| ||  ||||||||||||  |||| ||||||| ||||||||| ||||||     
T  19712722 tgtttataagtgggggcaatcctcacctcacaagccggttttgtggggttgtgtgttaggcccaaccaccatttctaagatggtatcagagcctcttcac 19712821  T
Q  180 gatctattgggccacctgctatca 203  Q
    |||   |||||||||||| |||||    
T  19712822 gattctttgggccacctgttatca 19712845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 73 - 224
Target Start/End: Original strand, 21690720 - 21690872
Alignment:
Q  73 cctgataatgtgtttataagtgggaacaatcctcacttcataa-ccggttttgtggggttgagttaggcccaaccatgatttttaagatgatatcagagc 171  Q
    ||||| ||| ||||||||||||||  |||||||||| ||| || ||| ||||||||||||| ||||||| |||||| ||||| ||| ||| ||||| |||    
T  21690720 cctgacaatttgtttataagtgggggcaatcctcacctcacaagccgattttgtggggttgtgttaggctcaaccacgatttctaatatggtatcaaagc 21690819  T
Q  172 atcttcaagatctattgggccacctgctatcaaatttctgctatcggaccaca 224  Q
     |||||| |||   |||||||||||| |||||  |||| | |||||| |||||    
T  21690820 ctcttcacgattctttgggccacctgttatcatgtttccgttatcgggccaca 21690872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 83 - 217
Target Start/End: Original strand, 11085589 - 11085724
Alignment:
Q  83 tgtttataagtgggaacaatcctcacttcataa-ccggttttgtggggttgagttaggcccaaccatgatttttaagatgatatcagagcatcttcaaga 181  Q
    ||||||||||||||  |||| ||||||||| || ||||||||||| ||||| |||||| |||| || ||||| ||||||| | | ||||| ||| |||||    
T  11085589 tgtttataagtgggggcaattctcacttcacaagccggttttgtgcggttgtgttaggtccaatcacgatttctaagatggttttagagcctctccaaga 11085688  T
Q  182 tctattgggccacctgctatcaaatttctgctatcg 217  Q
    |   ||||||||||||||||||  |||| |||||||    
T  11085689 tacgttgggccacctgctatcaggtttccgctatcg 11085724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 73 - 147
Target Start/End: Original strand, 13740914 - 13740989
Alignment:
Q  73 cctgataatgtgtttataagtgggaacaatcctcacttcataa-ccggttttgtggggttgagttaggcccaacca 147  Q
    ||||| ||| ||||||||||||||| |||||||||||||| ||  |||||||||||||||| ||||||||||||||    
T  13740914 cctgacaatttgtttataagtgggagcaatcctcacttcacaagtcggttttgtggggttgtgttaggcccaacca 13740989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 73 - 147
Target Start/End: Original strand, 13746414 - 13746489
Alignment:
Q  73 cctgataatgtgtttataagtgggaacaatcctcacttcataa-ccggttttgtggggttgagttaggcccaacca 147  Q
    ||||| ||| ||||||||||||||| |||||||||||||| ||  |||||||||||||||| ||||||||||||||    
T  13746414 cctgacaatttgtttataagtgggagcaatcctcacttcacaagtcggttttgtggggttgtgttaggcccaacca 13746489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 73 - 203
Target Start/End: Original strand, 27653215 - 27653346
Alignment:
Q  73 cctgataatgtgtttataagtgggaacaatcctcacttcataac-cggttttgtggggttgagttaggcccaaccatgatttttaagatgatatcagagc 171  Q
    ||||| ||| ||||||||||||||   ||||||||| ||| ||  |||||||||||| ||| |||||||||||||| ||||| ||| ||| |||||||||    
T  27653215 cctgacaatttgtttataagtgggggaaatcctcacctcacaagtcggttttgtgggattgtgttaggcccaaccacgatttctaatatggtatcagagc 27653314  T
Q  172 atcttcaagatctattgggccacctgctatca 203  Q
     |||||| |||   |||||||||||| |||||    
T  27653315 ctcttcacgattgtttgggccacctgttatca 27653346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 74 - 203
Target Start/End: Original strand, 6054168 - 6054298
Alignment:
Q  74 ctgataatgtgtttataagtgggaacaatcctcacttcataac-cggttttgtggggttgagttaggcccaaccatgatttttaagatgatatcagagca 172  Q
    |||| ||| |||||||||||| | |||||| |||| ||||||  | |||||||||| | | ||||| | |||||| ||||| ||||||||||||||| |     
T  6054168 ctgacaatctgtttataagtgaggacaatcatcacctcataagtcagttttgtgggatcgtgttagactcaaccacgatttctaagatgatatcagaacc 6054267  T
Q  173 tcttcaagatctattgggccacctgctatca 203  Q
    ||||||||||  ||| |||||||||||||||    
T  6054268 tcttcaagattcattaggccacctgctatca 6054298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 73 - 223
Target Start/End: Complemental strand, 6400932 - 6400790
Alignment:
Q  73 cctgataatgtgtttataagtgggaacaatcctcacttcataa-ccggttttgtggggttgagttaggcccaaccatgatttttaagatgatatcagagc 171  Q
    ||||| ||| |||||||||||||   |||||||||| ||| || |||||||||||||||        ||||||||| ||||||||||||| ||||| |||    
T  6400932 cctgacaatatgtttataagtggaggcaatcctcacctcacaagccggttttgtggggt--------gcccaaccacgatttttaagatggtatcaaagc 6400841  T
Q  172 atcttcaagatctattgggccacctgctatcaaatttctgctatcggaccac 223  Q
     ||| ||| |||||| ||| ||||||||||||  ||||||||||||||||||    
T  6400840 ctctccaaaatctat-gggtcacctgctatcaggtttctgctatcggaccac 6400790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 79 - 159
Target Start/End: Original strand, 9705258 - 9705339
Alignment:
Q  79 aatgtgtttataagtgggaacaatcctcacttcataa-ccggttttgtggggttgagttaggcccaaccatgatttttaaga 159  Q
    ||||||||||||||||||  |||||||||| ||| || ||||||||||||||||| ||||| |||||||| ||||| |||||    
T  9705258 aatgtgtttataagtgggggcaatcctcacctcacaagccggttttgtggggttgtgttagacccaaccacgatttctaaga 9705339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 73 - 160
Target Start/End: Complemental strand, 19639199 - 19639111
Alignment:
Q  73 cctgataatgtgtttataagtgggaacaatcctcacttca-taaccggttttgtggggttgagttaggcccaaccatgatttttaagat 160  Q
    ||||| |||||||||||||||||| ||||||||||| |||  ||||||||| |||||| || |||||| ||||||| ||||| ||||||    
T  19639199 cctgacaatgtgtttataagtggggacaatcctcacctcacaaaccggtttagtggggctgtgttaggtccaaccacgatttctaagat 19639111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 69 - 159
Target Start/End: Complemental strand, 2736257 - 2736166
Alignment:
Q  69 atgacctgataatgtgtttataagtgggaacaatcctcacttcat-aaccggttttgtggggttgagttaggcccaaccatgatttttaaga 159  Q
    ||||||||| |||||||||||||||||| ||||||||||| |||| ||| | |||||| || ||| ||||| |||||||| ||||| |||||    
T  2736257 atgacctgacaatgtgtttataagtggggacaatcctcacctcataaacagattttgtaggattgtgttagacccaaccacgatttctaaga 2736166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 73 - 147
Target Start/End: Complemental strand, 16722893 - 16722818
Alignment:
Q  73 cctgataatgtgtttataagtgggaacaatcctcacttcataa-ccggttttgtggggttgagttaggcccaacca 147  Q
    ||||||||| ||||||||||||||| |||| ||||| ||| || ||| ||||||||||||| ||||||||||||||    
T  16722893 cctgataatctgtttataagtgggagcaattctcacctcacaagccgattttgtggggttgtgttaggcccaacca 16722818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 85 - 203
Target Start/End: Original strand, 24554127 - 24554245
Alignment:
Q  85 tttataagtgggaacaatcctcacttcataa-ccggttttgtggggttgagttaggcccaaccatgatttttaagatgatatcagagcatcttcaagatc 183  Q
    ||||||||||||  ||||| |||| ||| || |||||||||||| |||| ||||| | ||||||| |||| ||| ||| ||||||||  |||||||||||    
T  24554127 tttataagtgggggcaatcttcacctcacaagccggttttgtggagttgtgttagtctcaaccataatttctaacatggtatcagagtgtcttcaagatc 24554226  T
Q  184 tattgggccacctgctatca 203  Q
     ||| |||||||||||||||    
T  24554227 catt-ggccacctgctatca 24554245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 69 - 223
Target Start/End: Original strand, 32290722 - 32290877
Alignment:
Q  69 atgacctgataatgtgtttataagtgggaacaatcctcacttcataa-ccggttttgtggggttgagttaggcccaaccatgatttttaagatgatatca 167  Q
    |||||||||||||||||||||||||||||  ||| | ||| ||  ||  |  |||||| |||||| |||||||| ||| | ||||| ||||||| ||| |    
T  32290722 atgacctgataatgtgtttataagtgggagtaattcccacctcgcaagtcaattttgtagggttgtgttaggccaaacaacgatttctaagatggtatta 32290821  T
Q  168 gagcatcttcaagatctattgggccacctgctatcaaatttctgctatcggaccac 223  Q
    |||||||| ||| ||| || ||||||||| |||||| ||||  |||||||| ||||    
T  32290822 gagcatctccaatatccatcgggccacctactatcagattttcgctatcgggccac 32290877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 83 - 203
Target Start/End: Complemental strand, 8001626 - 8001504
Alignment:
Q  83 tgtttataagtgggaacaatcctcacttcataac-cggttttgtggggttgagttaggcccaaccatgatttttaagatgatatcagag-catcttcaag 180  Q
    ||||||||||||||  ||||| |||| ||||||  || |||||| |||||| ||||||||||||||  |||| ||||||| |||||||| |  ||| |||    
T  8001626 tgtttataagtgggggcaatcttcacctcataagtcgattttgttgggttgtgttaggcccaaccacaatttctaagatggtatcagagtctccttaaag 8001527  T
Q  181 atctattgggccacctgctatca 203  Q
    |||  ||||||||||||||||||    
T  8001526 atccgttgggccacctgctatca 8001504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 74 - 183
Target Start/End: Original strand, 13740680 - 13740790
Alignment:
Q  74 ctgataatgtgtttataagtgggaacaatcctcacttcataa-ccggttttgtggggttgagttaggcccaaccatgatttttaagatgatatcagagca 172  Q
    |||| |||||||||||||||||  ||||||||| | ||||||  |||||||||| ||||| ||||||| |||||| ||||| ||| || |||| |||||     
T  13740680 ctgacaatgtgtttataagtggagacaatcctcgcctcataagtcggttttgtgaggttgtgttaggctcaaccacgatttctaatattatattagagcc 13740779  T
Q  173 tcttcaagatc 183  Q
    ||| |||||||    
T  13740780 tctgcaagatc 13740790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 74 - 183
Target Start/End: Original strand, 13746180 - 13746290
Alignment:
Q  74 ctgataatgtgtttataagtgggaacaatcctcacttcataa-ccggttttgtggggttgagttaggcccaaccatgatttttaagatgatatcagagca 172  Q
    |||| |||||||||||||||||  ||||||||| | ||||||  |||||||||| ||||| ||||||| |||||| ||||| ||| || |||| |||||     
T  13746180 ctgacaatgtgtttataagtggagacaatcctcgcctcataagtcggttttgtgaggttgtgttaggctcaaccacgatttctaatattatattagagcc 13746279  T
Q  173 tcttcaagatc 183  Q
    ||| |||||||    
T  13746280 tctgcaagatc 13746290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 159 - 217
Target Start/End: Original strand, 31961028 - 31961086
Alignment:
Q  159 atgatatcagagcatcttcaagatctattgggccacctgctatcaaatttctgctatcg 217  Q
    ||||||||||||| ||| ||||||| |||||||||||||||||||  ||||||||||||    
T  31961028 atgatatcagagcctctccaagatccattgggccacctgctatcaggtttctgctatcg 31961086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 69 - 216
Target Start/End: Original strand, 3713336 - 3713484
Alignment:
Q  69 atgacctgataatgtgtttataagtgggaacaatcctcacttcataa-ccggttttgtggggttgagttaggcccaaccatgatttttaagatgatatca 167  Q
    ||||||||| ||||||||||||||| |   |||||||||| ||| || ||| ||||||  ||||| ||||||| ||||||  |||| ||||||||||  |    
T  3713336 atgacctgacaatgtgtttataagttgaggcaatcctcacatcaaaagccgattttgtaaggttgtgttaggcacaaccacaatttctaagatgatacga 3713435  T
Q  168 gagcatcttcaagatctattgggccacctgctatcaaatttctgctatc 216  Q
    |||| ||| |||||   ||||| ||||||| |||||| |||| ||||||    
T  3713436 gagcctctccaagacacattggaccacctggtatcaagtttccgctatc 3713484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 143 - 215
Target Start/End: Original strand, 3921627 - 3921699
Alignment:
Q  143 aaccatgatttttaagatgatatcagagcatcttcaagatctattgggccacctgctatcaaatttctgctat 215  Q
    ||||||||||| ||| ||| ||||||||| ||||||||||| |||||  ||||||||||||| |||| |||||    
T  3921627 aaccatgatttctaatatggtatcagagcctcttcaagatccattggatcacctgctatcaagtttccgctat 3921699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 73 - 160
Target Start/End: Complemental strand, 6400706 - 6400618
Alignment:
Q  73 cctgataatgtgtttataagtgggaacaatcctcacttcataac-cggttttgtggggttgagttaggcccaaccatgatttttaagat 160  Q
    ||||| |||||||||||||||||   |||||||||| ||| ||  |||||||||||||||| ||||| |||||||| | ||||||||||    
T  6400706 cctgacaatgtgtttataagtggaggcaatcctcacatcacaagtcggttttgtggggttgtgttagacccaaccacggtttttaagat 6400618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 69 - 147
Target Start/End: Original strand, 2753252 - 2753331
Alignment:
Q  69 atgacctgataatgtgtttataagtgggaacaatcctcacttcataac-cggttttgtggggttgagttaggcccaacca 147  Q
    |||| |||| ||||||||||||||||||   ||||||||| ||| ||  |||||||||||||||| ||||||||||||||    
T  2753252 atgatctgacaatgtgtttataagtgggggtaatcctcacctcacaaggcggttttgtggggttgtgttaggcccaacca 2753331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 79 - 169
Target Start/End: Complemental strand, 15082223 - 15082133
Alignment:
Q  79 aatgtgtttataagtgggaacaatcctcacttcataa-ccggttttgtggggttgagttaggcccaaccatgatttttaagatgatatcaga 169  Q
    ||||||||||||||||| |||| ||||||| ||| || ||||||||||||| ||| ||||||||||| || ||||| ||| ||| |||||||    
T  15082223 aatgtgtttataagtgg-aacagtcctcacctcacaagccggttttgtgggattgtgttaggcccaaacacgatttctaatatggtatcaga 15082133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 73 - 159
Target Start/End: Original strand, 16570157 - 16570244
Alignment:
Q  73 cctgataatgtgtttataagtgggaacaatcctcacttcataac-cggttttgtggggttgagttaggcccaaccatgatttttaaga 159  Q
    ||||| |||||||||||||| |||   ||||||||| | | ||  |||||||||||||||| |||||||||||||||||||| |||||    
T  16570157 cctgacaatgtgtttataagcgggggtaatcctcacgtaacaagtcggttttgtggggttgtgttaggcccaaccatgatttctaaga 16570244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 69 - 147
Target Start/End: Complemental strand, 17147750 - 17147671
Alignment:
Q  69 atgacctgataatgtgtttataagtgggaacaatcctcacttcataa-ccggttttgtggggttgagttaggcccaacca 147  Q
    ||||||||| ||||| ||||||||||||  |||||||||| ||| || ||||||||||||||||  |||||| |||||||    
T  17147750 atgacctgacaatgtatttataagtgggggcaatcctcacctcacaagccggttttgtggggttatgttaggtccaacca 17147671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 99 - 170
Target Start/End: Original strand, 20373595 - 20373666
Alignment:
Q  99 caatcctcacttcataaccggttttgtggggttgagttaggcccaaccatgatttttaagatgatatcagag 170  Q
    |||||||||| ||| || |  ||||||||||||| |||||||||||||| ||||| ||||||| ||||||||    
T  20373595 caatcctcacctcacaagccattttgtggggttgtgttaggcccaaccacgatttataagatggtatcagag 20373666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 73 - 147
Target Start/End: Original strand, 27656456 - 27656531
Alignment:
Q  73 cctgataatgtgtttataagtgggaacaatcctcacttcataa-ccggttttgtggggttgagttaggcccaacca 147  Q
    ||||| ||| ||||||||||||||   ||||||||| ||| || ||||||||||||||||| ||||||||||||||    
T  27656456 cctgacaatttgtttataagtgggggaaatcctcacctcacaagccggttttgtggggttgtgttaggcccaacca 27656531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 79 - 201
Target Start/End: Complemental strand, 30849482 - 30849359
Alignment:
Q  79 aatgtgtttataagtgggaacaatcctcacttcataa-ccggttttgtggggttgagttaggcccaaccatgatttttaagatgatatcagagcatcttc 177  Q
    |||||| |||||||||||| |||||||||| ||  || ||||||||||||||||| | ||| || ||  | ||||| ||||||||||||| ||   |||     
T  30849482 aatgtgcttataagtgggagcaatcctcacatcgcaagccggttttgtggggttgtgctagacctaattacgatttctaagatgatatcaaagtcccttt 30849383  T
Q  178 aagatctattgggccacctgctat 201  Q
    |||||| ||||| |||||||||||    
T  30849382 aagatccattggaccacctgctat 30849359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 120 - 218
Target Start/End: Original strand, 3680058 - 3680156
Alignment:
Q  120 ttttgtggggttgagttaggcccaaccatgatttttaagatgatatcagagcatcttcaagatctattgggccacctgctatcaaatttctgctatcgg 218  Q
    ||||||||||||| ||||||||||||||  |||| ||||||| ||||||| | ||| ||| ||| || ||| |||||||||| |  |||| ||||||||    
T  3680058 ttttgtggggttgtgttaggcccaaccacaatttctaagatggtatcagaccctctccaaaatccatcgggtcacctgctattaggtttccgctatcgg 3680156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 74 - 159
Target Start/End: Complemental strand, 25065179 - 25065093
Alignment:
Q  74 ctgataatgtgtttataagtgggaacaatcctcacttcataa-ccggttttgtggggttgagttaggcccaaccatgatttttaaga 159  Q
    |||| ||| ||||||||||| ||  |||||||||| ||| || ||||||||||||||||| |||||||||||| | ||||| |||||    
T  25065179 ctgacaatatgtttataagtaggggcaatcctcacctcacaagccggttttgtggggttgtgttaggcccaactacgatttctaaga 25065093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 70 - 143
Target Start/End: Complemental strand, 28868046 - 28867972
Alignment:
Q  70 tgacctgataatgtgtttataagtgggaacaatcctcacttcataa-ccggttttgtggggttgagttaggccca 143  Q
    |||||||| ||| | ||||||||||||  |||||||||| ||| || ||||||||||||||||| ||||||||||    
T  28868046 tgacctgacaatttatttataagtgggggcaatcctcacctcacaagccggttttgtggggttgtgttaggccca 28867972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 73 - 153
Target Start/End: Original strand, 27772712 - 27772793
Alignment:
Q  73 cctgataatgtgtttataagtgggaacaatcctcacttcataa-ccggttttgtggggttgagttaggcccaaccatgattt 153  Q
    ||||| ||| ||||||||||||||  |||||||||| ||| || |||||||||||| |||| |||||| ||||||| |||||    
T  27772712 cctgacaatttgtttataagtgggggcaatcctcacctcacaagccggttttgtggagttgtgttaggtccaaccacgattt 27772793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 83 - 203
Target Start/End: Complemental strand, 5572691 - 5572571
Alignment:
Q  83 tgtttataagtgggaacaatcctcacttcataaccggttttgtggggttgagttaggcccaaccatgatttttaagatgatatcagagcatcttcaagat 182  Q
    ||||||||||||||  | |||||||| ||| || | | |||||||||||  ||| |||||||||| ||||| ||| ||| ||||||||| |||||| |||    
T  5572691 tgtttataagtgggggccatcctcacctcacaagccggtttgtggggttttgttcggcccaaccacgatttctaatatggtatcagagcctcttcacgat 5572592  T
Q  183 ctattgggccacctgctatca 203  Q
       ||||||| |||| |||||    
T  5572591 tctttgggccgcctgttatca 5572571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 74 - 153
Target Start/End: Complemental strand, 12330375 - 12330296
Alignment:
Q  74 ctgataatgtgtttataagtgggaacaatcctcacttcataa-ccggttttgtggggttgagttaggcccaaccatgattt 153  Q
    |||| ||||||||||||||||||  |||||||||  ||| || ||||||||||| ||||| |||||||||||||| |||||    
T  12330375 ctgacaatgtgtttataagtgggg-caatcctcatctcacaagccggttttgtgaggttgtgttaggcccaaccacgattt 12330296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 69 - 108
Target Start/End: Complemental strand, 7638680 - 7638641
Alignment:
Q  69 atgacctgataatgtgtttataagtgggaacaatcctcac 108  Q
    ||||||||||||||||||||||||||||  ||||||||||    
T  7638680 atgacctgataatgtgtttataagtgggggcaatcctcac 7638641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 99 - 153
Target Start/End: Original strand, 8026628 - 8026683
Alignment:
Q  99 caatcctcacttcataa-ccggttttgtggggttgagttaggcccaaccatgattt 153  Q
    |||||||||| ||| || ||||||||||||||||| |||||||||||||| |||||    
T  8026628 caatcctcacctcacaagccggttttgtggggttgtgttaggcccaaccacgattt 8026683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 79 - 153
Target Start/End: Complemental strand, 12330024 - 12329949
Alignment:
Q  79 aatgtgtttataagtgggaacaatcctcacttcataaccgg-ttttgtggggttgagttaggcccaaccatgattt 153  Q
    ||||||||||||||||||  |||||||||| ||| || | | ||||||| ||||| |||||||||||||| |||||    
T  12330024 aatgtgtttataagtgggggcaatcctcacctcacaagctgattttgtgaggttgtgttaggcccaaccacgattt 12329949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #54
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 73 - 147
Target Start/End: Original strand, 19712950 - 19713025
Alignment:
Q  73 cctgataatgtgtttataagtgggaacaatcctcacttcataa-ccggttttgtggggttgagttaggcccaacca 147  Q
    ||||| ||| ||||||||||||||  |||| ||||| ||| || ||||||||||||| ||| ||||||||||||||    
T  19712950 cctgacaatttgtttataagtgggggcaattctcacctcacaagccggttttgtgggattgtgttaggcccaacca 19713025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #55
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 16 - 50
Target Start/End: Complemental strand, 33631605 - 33631571
Alignment:
Q  16 caagggataaagaattagtattttgtaagtgttaa 50  Q
    |||||||||||||||||||||||||||||| ||||    
T  33631605 caagggataaagaattagtattttgtaagttttaa 33631571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #56
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 149 - 223
Target Start/End: Original strand, 34345473 - 34345546
Alignment:
Q  149 gatttttaagatgatatcagagcatcttcaagatctattgggccacctgctatcaaatttctgctatcggaccac 223  Q
    ||||| |||||| |||||||||| |||| || |||||||| ||||||||||||||  |||| | |||||||||||    
T  34345473 gatttctaagataatatcagagcctctttaa-atctattgagccacctgctatcaggtttcagttatcggaccac 34345546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #57
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 73 - 153
Target Start/End: Complemental strand, 5572470 - 5572389
Alignment:
Q  73 cctgataatgtgtttataagtgggaacaatcctcacttcataac-cggttttgtggggttgagttaggcccaaccatgattt 153  Q
    ||||| ||| ||||||||||| ||  | |||||||| ||| ||  |||||||||||||||| |||||||||||||| |||||    
T  5572470 cctgacaatttgtttataagttggggccatcctcacctcacaagtcggttttgtggggttgtgttaggcccaaccacgattt 5572389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #58
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 73 - 153
Target Start/End: Original strand, 27772944 - 27773025
Alignment:
Q  73 cctgataatgtgtttataagtgggaacaatcctcacttcataa-ccggttttgtggggttgagttaggcccaaccatgattt 153  Q
    ||||| ||| ||||||||||||||  |||||||||| ||| || | ||||||||||| ||| |||| |||||||||| ||||    
T  27772944 cctgacaatttgtttataagtgggggcaatcctcacctcacaagctggttttgtgggattgtgttaagcccaaccataattt 27773025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #59
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 119 - 159
Target Start/End: Complemental strand, 4161885 - 4161845
Alignment:
Q  119 gttttgtggggttgagttaggcccaaccatgatttttaaga 159  Q
    |||||||||||||| |||||||||||||| ||||| |||||    
T  4161885 gttttgtggggttgtgttaggcccaaccacgatttctaaga 4161845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #60
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 119 - 159
Target Start/End: Complemental strand, 4223505 - 4223465
Alignment:
Q  119 gttttgtggggttgagttaggcccaaccatgatttttaaga 159  Q
    |||||||||||||| |||||||||||||| ||||| |||||    
T  4223505 gttttgtggggttgtgttaggcccaaccacgatttctaaga 4223465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 86; Significance: 3e-41; HSPs: 71)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 69 - 217
Target Start/End: Original strand, 41790653 - 41790801
Alignment:
Q  69 atgacctgataatgtgtttataagtgggaacaatcctcacttcataa-ccggttttgtggggttgagttaggcccaaccatgatttttaagatgatatca 167  Q
    ||||||||| |||||||||||||||||| ||||||||||| |||||| ||||||||||||| ||| |||||||||||||| ||||| ||||||| |||||    
T  41790653 atgacctgacaatgtgtttataagtggggacaatcctcacctcataagccggttttgtggg-ttgtgttaggcccaaccacgatttctaagatggtatca 41790751  T
Q  168 gagcatcttcaagatctattgggccacctgctatcaaatttctgctatcg 217  Q
    |||| ||||||||||| |||||||||||||||||||  |||| |||||||    
T  41790752 gagcctcttcaagatccattgggccacctgctatcaggtttccgctatcg 41790801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 73 - 223
Target Start/End: Complemental strand, 24532507 - 24532356
Alignment:
Q  73 cctgataatgtgtttataagtgggaacaatcctcacttcataa-ccggttttgtggggttgagttaggcccaaccatgatttttaagatgatatcagagc 171  Q
    ||||| ||||||||||||||||||  ||||| |||| ||| || ||||||||||||||||| |||||||||||||||||||| ||||||| |||||||||    
T  24532507 cctgacaatgtgtttataagtgggggcaatcatcacctcacaagccggttttgtggggttgtgttaggcccaaccatgatttctaagatggtatcagagc 24532408  T
Q  172 atcttcaagatctattgggccacctgctatcaaatttctgctatcggaccac 223  Q
      |||||||||| |||||||||||||||||||  |||| |||||||| ||||    
T  24532407 cccttcaagatccattgggccacctgctatcaggtttccgctatcgggccac 24532356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 79 - 223
Target Start/End: Original strand, 20301265 - 20301410
Alignment:
Q  79 aatgtgtttataagtgggaacaatcctcacttcataa-ccggttttgtggggttgagttaggcccaaccatgatttttaagatgatatcagagcatcttc 177  Q
    ||||||||||||||||||  ||||||| || ||| || || |||||||| ||||| |||||||||||||| ||||| ||||||| ||||||||| |||||    
T  20301265 aatgtgtttataagtgggggcaatcctaacctcacaagcccgttttgtgaggttgtgttaggcccaaccacgatttctaagatggtatcagagcctcttc 20301364  T
Q  178 aagatctattgggccacctgctatcaaatttctgctatcggaccac 223  Q
    |||||| |||||||||||||||||||  |||| |||||||||||||    
T  20301365 aagatccattgggccacctgctatcaggtttccgctatcggaccac 20301410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 79 - 223
Target Start/End: Original strand, 21087897 - 21088042
Alignment:
Q  79 aatgtgtttataagtgggaacaatcctcacttcataa-ccggttttgtggggttgagttaggcccaaccatgatttttaagatgatatcagagcatcttc 177  Q
    ||||||||||||||||||  ||||||| || ||| || || |||||||| ||||| |||||||||||||| ||||| ||||||| ||||||||| |||||    
T  21087897 aatgtgtttataagtgggggcaatcctaacctcacaagcccgttttgtgaggttgtgttaggcccaaccacgatttctaagatggtatcagagcctcttc 21087996  T
Q  178 aagatctattgggccacctgctatcaaatttctgctatcggaccac 223  Q
    |||||| |||||||||||||||||||  |||| |||||||||||||    
T  21087997 aagatccattgggccacctgctatcaggtttccgctatcggaccac 21088042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 74 - 217
Target Start/End: Complemental strand, 11232514 - 11232370
Alignment:
Q  74 ctgataatgtgtttataagtgggaacaatcctcacttcataa-ccggttttgtggggttgagttaggcccaaccatgatttttaagatgatatcagagca 172  Q
    |||| ||||||||||||||||||  |||||||||| | | || ||||||||||||||||| ||||||||||||||  |||| ||||||| |||||||||     
T  11232514 ctgacaatgtgtttataagtgggggcaatcctcaccttacaagccggttttgtggggttgtgttaggcccaaccaccatttctaagatggtatcagagcc 11232415  T
Q  173 tcttcaagatctattgggccacctgctatcaaatttctgctatcg 217  Q
    ||| ||||||| ||||||||||||| |||||  |||| |||||||    
T  11232414 tctccaagatccattgggccacctgttatcaggtttccgctatcg 11232370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 73 - 216
Target Start/End: Complemental strand, 39053015 - 39052871
Alignment:
Q  73 cctgataatgtgtttataagtgggaacaatcctcacttcataa-ccggttttgtggggttgagttaggcccaaccatgatttttaagatgatatcagagc 171  Q
    ||||| ||||||||||||||||||  |||||||||| ||| || ||||||||||||||||| |||||||||||| | ||||| ||||||| ||| |||||    
T  39053015 cctgacaatgtgtttataagtgggggcaatcctcacctcacaagccggttttgtggggttgtgttaggcccaacaacgatttctaagatggtattagagc 39052916  T
Q  172 atcttcaagatctattgggccacctgctatcaaatttctgctatc 216  Q
     ||| ||||||| ||| |||| ||||||||||  |||| ||||||    
T  39052915 ctctccaagatccatttggccccctgctatcaggtttccgctatc 39052871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 73 - 194
Target Start/End: Complemental strand, 11232280 - 11232158
Alignment:
Q  73 cctgataatgtgtttataagtgggaacaatcctcacttcataa-ccggttttgtggggttgagttaggcccaaccatgatttttaagatgatatcagagc 171  Q
    ||||| ||||||||||||||||||  |||||||||| | | || ||||||||||||||||| ||||||||||||||  |||| ||||||| |||||||||    
T  11232280 cctgacaatgtgtttataagtgggggcaatcctcaccttacaagccggttttgtggggttgtgttaggcccaaccaccatttctaagatggtatcagagc 11232181  T
Q  172 atcttcaagatctattgggccac 194  Q
     ||| ||||||| ||||||||||    
T  11232180 ctctccaagatccattgggccac 11232158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 79 - 203
Target Start/End: Complemental strand, 5932264 - 5932139
Alignment:
Q  79 aatgtgtttataagtgggaacaatcctcacttcataa-ccggttttgtggggttgagttaggcccaaccatgatttttaagatgatatcagagcatcttc 177  Q
    ||||||||||||||||||  ||| |||||| ||| || || |||||||||||||| ||||||||||||||  |||||||||||| ||||||||| ||| |    
T  5932264 aatgtgtttataagtgggggcaagcctcacctcacaagcctgttttgtggggttgtgttaggcccaaccaccatttttaagatggtatcagagcctctcc 5932165  T
Q  178 aagatctattgggccacctgctatca 203  Q
    |||||| ||||| |||||| ||||||    
T  5932164 aagatccattggaccacctactatca 5932139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 70 - 203
Target Start/End: Original strand, 4828063 - 4828197
Alignment:
Q  70 tgacctgataatgtgtttataagtgggaacaatcctcacttcataa-ccggttttgtggggttgagttaggcccaaccatgatttttaagatgatatcag 168  Q
    |||| ||| ||| |||||||||||||| ||||||||||| ||| || ||||||||||||||||| |||||||||||||| ||| | ||| ||| ||||||    
T  4828063 tgacatgacaatttgtttataagtggggacaatcctcacctcacaagccggttttgtggggttgtgttaggcccaaccacgatctctaatatggtatcag 4828162  T
Q  169 agcatcttcaagatctattgggccacctgctatca 203  Q
    ||| |||||| |||   |||||||||||| |||||    
T  4828163 agcctcttcacgattctttgggccacctgttatca 4828197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 74 - 223
Target Start/End: Original strand, 12317045 - 12317195
Alignment:
Q  74 ctgataatgtgtttataagtgggaacaatcctcacttcataaccgg-ttttgtggggttgagttaggcccaaccatgatttttaagatgatatcagagca 172  Q
    |||| ||||||||||||||||||  |||||||||| |||||| | | ||||||||| ||| |||||||||||||| ||||| ||||||| ||||||||      
T  12317045 ctgacaatgtgtttataagtgggggcaatcctcacctcataagctgattttgtgggattgtgttaggcccaaccacgatttctaagatggtatcagagac 12317144  T
Q  173 tcttcaagatctattgggccacctgctatcaaatttctgctatcggaccac 223  Q
    |||||| |||   |||||||||||| |||||  |||| | |||||||||||    
T  12317145 tcttcacgattctttgggccacctgttatcaggtttccgttatcggaccac 12317195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 74 - 203
Target Start/End: Original strand, 12688071 - 12688201
Alignment:
Q  74 ctgataatgtgtttataagtgggaacaatcctcacttcataa-ccggttttgtggggttgagttaggcccaaccatgatttttaagatgatatcagagca 172  Q
    ||||||||||||||||||||| |  |||||| ||| ||| || |||||||||||| |||  ||||| | ||| || ||||| ||||||||||| |||||     
T  12688071 ctgataatgtgtttataagtgagggcaatccccacctcacaagccggttttgtggagttatgttagactcaaacacgatttctaagatgatattagagcc 12688170  T
Q  173 tcttcaagatctattgggccacctgctatca 203  Q
    ||||||||||| |||||||||||||||||||    
T  12688171 tcttcaagatccattgggccacctgctatca 12688201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 117 - 223
Target Start/End: Original strand, 31197658 - 31197763
Alignment:
Q  117 cggttttgtggggttgagttaggcccaaccatgatttttaagatgatatcagagcatcttcaagatctattgggccacctgctatcaaatttctgctatc 216  Q
    ||||||||| |||||| |||||||||||||| ||||| ||||||| ||||||||| ||| | ||||| |||||||||||||||||||  |||| ||||||    
T  31197658 cggttttgtagggttgtgttaggcccaacca-gatttctaagatggtatcagagcctctccgagatccattgggccacctgctatcaggtttccgctatc 31197756  T
Q  217 ggaccac 223  Q
    |||||||    
T  31197757 ggaccac 31197763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 73 - 203
Target Start/End: Complemental strand, 19256906 - 19256775
Alignment:
Q  73 cctgataatgtgtttataagtgggaacaatcctcacttcataacc-ggttttgtggggttgagttaggcccaaccatgatttttaagatgatatcagagc 171  Q
    ||||| ||| ||||||||||||||  |||||||||| ||| || | ||||||||||||||| |||||||||||||| ||||| ||| ||| |||||||||    
T  19256906 cctgacaatttgtttataagtgggggcaatcctcacctcacaagcaggttttgtggggttgtgttaggcccaaccacgatttctaatatggtatcagagc 19256807  T
Q  172 atcttcaagatctattgggccacctgctatca 203  Q
     |||||| |||   |||||||||||| |||||    
T  19256806 ctcttcacgattctttgggccacctgttatca 19256775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 82 - 223
Target Start/End: Original strand, 37001233 - 37001378
Alignment:
Q  82 gtgtttataagtgggaacaatcctcacttcataa-ccggttttgtggggttgagttaggcccaaccatgatttttaagatgatatcagagcatct---tc 177  Q
    ||||||||| |||||  |||||||||| ||| || |||||||||||| |||| |||||||||||||| |||||  |||||| ||||||||| |||   ||    
T  37001233 gtgtttataggtgggggcaatcctcacctcacaagccggttttgtggagttgtgttaggcccaaccacgatttcaaagatggtatcagagcctcttcatc 37001332  T
Q  178 aagatctattgggccacctgctatcaaatttctgctatcggaccac 223  Q
    |||||| ||||||||||||||| |||  |||| |||||||| ||||    
T  37001333 aagatccattgggccacctgctgtcaggtttccgctatcgggccac 37001378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 74 - 203
Target Start/End: Original strand, 8084126 - 8084256
Alignment:
Q  74 ctgataatgtgtttataagtgggaacaatcctcacttcataa-ccggttttgtggggttgagttaggcccaaccatgatttttaagatgatatcagagca 172  Q
    |||| ||||| ||||||||||||  |||||||||| ||| || | ||||||| || |||| ||||| |||||||| ||||| ||||||| |||||||||     
T  8084126 ctgacaatgtatttataagtgggggcaatcctcacctcacaagctggttttgcggagttgtgttagacccaaccacgatttctaagatggtatcagagcc 8084225  T
Q  173 tcttcaagatctattgggccacctgctatca 203  Q
    ||| ||||||| |||||||||| ||||||||    
T  8084226 tctccaagatccattgggccacatgctatca 8084256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 79 - 216
Target Start/End: Complemental strand, 15042966 - 15042826
Alignment:
Q  79 aatgtgtttataagtgggaacaatcctcacttcataa-ccggttttgtggggttgagttaggcccaaccatgatttttaagatgatatcagagc--atct 175  Q
    ||||||||||||||||||  ||||||| || || ||| ||||||||||||||||| |||||||| ||||| ||||| ||||||| ||||| |||   |||    
T  15042966 aatgtgtttataagtgggggcaatccttacctcgtaaaccggttttgtggggttgtgttaggcctaaccacgatttctaagatgttatcatagcctctct 15042867  T
Q  176 tcaagatctattgggccacctgctatcaaatttctgctatc 216  Q
     ||||||  |||||||||||||||||||  |||| ||||||    
T  15042866 ccaagattcattgggccacctgctatcaggtttccgctatc 15042826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 68 - 160
Target Start/End: Original strand, 37001457 - 37001550
Alignment:
Q  68 aatgacctgataatgtgtttataagtgggaacaatcctcacttcataa-ccggttttgtggggttgagttaggcccaaccatgatttttaagat 160  Q
    |||| ||||| || ||||||||||||||| ||||||||||| ||| || ||||||||||||||||| |||||||||||||| ||||| ||||||    
T  37001457 aatggcctgacaaagtgtttataagtggggacaatcctcacatcacaagccggttttgtggggttgtgttaggcccaaccacgatttctaagat 37001550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 80 - 215
Target Start/End: Complemental strand, 37868662 - 37868526
Alignment:
Q  80 atgtgtttataagtgggaacaatcctcacttcataacc-ggttttgtggggttgagttaggcccaaccatgatttttaagatgatatcagagcatcttca 178  Q
    |||||||||| | ||||  |||||||||| ||| || | ||||||||||  ||| |||||||| ||||| ||||||||||||| ||||| ||| ||| ||    
T  37868662 atgtgtttattaatgggggcaatcctcacctcacaagctggttttgtggaattgtgttaggcctaaccacgatttttaagatggtatcatagcctctcca 37868563  T
Q  179 agatctattgggccacctgctatcaaatttctgctat 215  Q
    ||||| ||||||||||| |||||||| |||| |||||    
T  37868562 agatccattgggccacccgctatcaagtttccgctat 37868526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 120 - 219
Target Start/End: Complemental strand, 10614977 - 10614878
Alignment:
Q  120 ttttgtggggttgagttaggcccaaccatgatttttaagatgatatcagagcatcttcaagatctattgggccacctgctatcaaatttctgctatcgga 219  Q
    |||||||||||||  |||||| |||||| ||||| ||||||||||||| ||| ||| ||||||| ||||| |||||||| ||||| ||| ||||||||||    
T  10614977 ttttgtggggttgtattaggctcaaccacgatttataagatgatatcatagcctctccaagatccattggaccacctgcaatcaagtttttgctatcgga 10614878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 79 - 203
Target Start/End: Complemental strand, 3157640 - 3157514
Alignment:
Q  79 aatgtgtttataagtgggaa-caatcctcacttcataa-ccggttttgtggggttgagttaggcccaaccatgatttttaagatgatatcagagcatctt 176  Q
    ||||| ||||||||||||   |||||||||| ||| || || |||||||||||||| ||||||| ||||||  |||| ||||||||||||||||| |||     
T  3157640 aatgtatttataagtggggggcaatcctcacctcacaagccagttttgtggggttgtgttaggctcaaccaccatttataagatgatatcagagcctctc 3157541  T
Q  177 caagatctattgggccacctgctatca 203  Q
    ||| ||| ||||| |||||||||||||    
T  3157540 caaaatccattggaccacctgctatca 3157514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 83 - 184
Target Start/End: Complemental strand, 16962322 - 16962220
Alignment:
Q  83 tgtttataagtgggaacaatcctcacttcataa-ccggttttgtggggttgagttaggcccaaccatgatttttaagatgatatcagagcatcttcaaga 181  Q
    |||||||||||||||||||| ||||| ||| || ||||||||||||| ||| |||||| |||||||  |||||||||||  |||||||| |||| |||||    
T  16962322 tgtttataagtgggaacaattctcacctcacaaaccggttttgtgggattgtgttaggtccaaccacaatttttaagattgtatcagagtatctccaaga 16962223  T
Q  182 tct 184  Q
    |||    
T  16962222 tct 16962220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 83 - 203
Target Start/End: Complemental strand, 20094870 - 20094750
Alignment:
Q  83 tgtttataagtgggaacaatcctcacttcataa-ccggttttgtggggttgagttaggcccaaccatgatttttaagatgatatcagagcatcttcaaga 181  Q
    |||||||| |||||  |||||||||| | | || |||||||||||||||||  ||||||||||||| ||||| |||| || ||||||||  |||||||||    
T  20094870 tgtttatatgtgggggcaatcctcaccttacaagccggttttgtggggttgt-ttaggcccaaccacgatttataagttggtatcagagtttcttcaaga 20094772  T
Q  182 tctattgggccacctgctatca 203  Q
    || |||||||||||| ||||||    
T  20094771 tccattgggccacctcctatca 20094750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 73 - 176
Target Start/End: Original strand, 17469816 - 17469920
Alignment:
Q  73 cctgataatgtgtttataagtgggaacaatcctcacttcataa-ccggttttgtggggttgagttaggcccaaccatgatttttaagatgatatcagagc 171  Q
    ||||| ||| ||||||||||||||  |||||||||| ||| || ||||||||||||||||| ||||||| |||||| ||||| ||| ||| |||||||||    
T  17469816 cctgacaatttgtttataagtgggggcaatcctcacctcacaagccggttttgtggggttgtgttaggctcaaccacgatttctaatatggtatcagagc 17469915  T
Q  172 atctt 176  Q
     ||||    
T  17469916 ctctt 17469920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 69 - 188
Target Start/End: Original strand, 29005858 - 29005978
Alignment:
Q  69 atgacctgataatgtgtttataagtgggaacaatcctcacttcataa-ccggttttgtggggttgagttaggcccaaccatgatttttaagatgatatca 167  Q
    ||||||||| ||| ||||||||||||||||||||||||||||||||| |||  ||| || ||||| ||||| |||||||| ||||| ||||| | ||| |    
T  29005858 atgacctgacaatatgtttataagtgggaacaatcctcacttcataagccgaatttatgaggttgtgttagacccaaccacgatttctaagacggtatta 29005957  T
Q  168 gagcatcttcaagatctattg 188  Q
    |||  || |||||||| ||||    
T  29005958 gagtctcctcaagatccattg 29005978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 73 - 159
Target Start/End: Complemental strand, 5932035 - 5931948
Alignment:
Q  73 cctgataatgtgtttataagtgggaacaatcctcacttcataa-ccggttttgtggggttgagttaggcccaaccatgatttttaaga 159  Q
    ||||| ||||||||||||||||||  |||||||||| ||| || ||||||||||||||||  ||||||||||||||  ||||||||||    
T  5932035 cctgacaatgtgtttataagtgggggcaatcctcacctcacaagccggttttgtggggttatgttaggcccaaccaccatttttaaga 5931948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 73 - 159
Target Start/End: Complemental strand, 35682867 - 35682780
Alignment:
Q  73 cctgataatgtgtttataagtgggaacaatcctcacttcataa-ccggttttgtggggttgagttaggcccaaccatgatttttaaga 159  Q
    ||||| ||||||||||||||||||  |||||||||| ||  || ||||||||||||||||| |||||||||||||| ||||| |||||    
T  35682867 cctgacaatgtgtttataagtgggggcaatcctcacctcgcaagccggttttgtggggttgtgttaggcccaaccacgatttctaaga 35682780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 86 - 159
Target Start/End: Original strand, 27204975 - 27205049
Alignment:
Q  86 ttataagtgggaacaatcctcacttcataa-ccggttttgtggggttgagttaggcccaaccatgatttttaaga 159  Q
    |||||||||||  |||||||||| |||||| ||||||||||||||||| |||||||||||||| ||||| |||||    
T  27204975 ttataagtgggggcaatcctcacctcataagccggttttgtggggttgtgttaggcccaaccacgatttctaaga 27205049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 86 - 159
Target Start/End: Original strand, 27205073 - 27205147
Alignment:
Q  86 ttataagtgggaacaatcctcacttcataa-ccggttttgtggggttgagttaggcccaaccatgatttttaaga 159  Q
    |||||||||||  |||||||||| |||||| ||||||||||||||||| |||||||||||||| ||||| |||||    
T  27205073 ttataagtgggggcaatcctcacctcataagccggttttgtggggttgtgttaggcccaaccacgatttctaaga 27205147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 86 - 159
Target Start/End: Original strand, 27205171 - 27205245
Alignment:
Q  86 ttataagtgggaacaatcctcacttcataa-ccggttttgtggggttgagttaggcccaaccatgatttttaaga 159  Q
    |||||||||||  |||||||||| |||||| ||||||||||||||||| |||||||||||||| ||||| |||||    
T  27205171 ttataagtgggggcaatcctcacctcataagccggttttgtggggttgtgttaggcccaaccacgatttctaaga 27205245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 73 - 178
Target Start/End: Original strand, 34842676 - 34842782
Alignment:
Q  73 cctgataatgtgtttataagtgggaacaatcctcacttcataac-cggttttgtggggttgagttaggcccaaccatgatttttaagatgatatcagagc 171  Q
    ||||| ||| ||||||||||||||  |||||||||| |||||   |||||||||||||||| ||||||| |||||| ||||| ||| ||| |||||||||    
T  34842676 cctgacaatttgtttataagtgggggcaatcctcacctcataggtcggttttgtggggttgtgttaggctcaaccacgatttctaatatggtatcagagc 34842775  T
Q  172 atcttca 178  Q
     ||||||    
T  34842776 ctcttca 34842782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 73 - 153
Target Start/End: Complemental strand, 19256672 - 19256591
Alignment:
Q  73 cctgataatgtgtttataagtgggaacaatcctcacttcataa-ccggttttgtggggttgagttaggcccaaccatgattt 153  Q
    ||||| ||| ||||||||||||||  |||||||||| ||| || ||||||||||||||||| |||||||||||||| |||||    
T  19256672 cctgacaatttgtttataagtgggggcaatcctcacctcacaagccggttttgtggggttgtgttaggcccaaccacgattt 19256591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 74 - 169
Target Start/End: Complemental strand, 5590453 - 5590357
Alignment:
Q  74 ctgataatgtgtttataagtgggaacaatcctcacttcataa-ccggttttgtggggttgagttaggcccaaccatgatttttaagatgatatcaga 169  Q
    |||| |||||||||| |||||||  |||||||||||||| || ||||||||||| ||||| ||||||||||||||  |||| ||| ||| |||||||    
T  5590453 ctgacaatgtgtttacaagtgggggcaatcctcacttcacaagccggttttgtgaggttgtgttaggcccaaccacaatttctaaaatggtatcaga 5590357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 82 - 216
Target Start/End: Complemental strand, 8466801 - 8466665
Alignment:
Q  82 gtgtttataagtgggaacaatcctcacttcataacc-ggttttgtggggttgagttaggcccaaccatgatttttaagatgatatcagagcatc-ttcaa 179  Q
    ||||||||||||||| ||||||||||| ||| || | |||||| |||||||| ||  | ||||||||  |||| ||||||| ||||| ||| |  |||||    
T  8466801 gtgtttataagtggggacaatcctcacctcacaagctggttttatggggttgtgtacgacccaaccacaatttctaagatggtatcaaagcttggttcaa 8466702  T
Q  180 gatctattgggccacctgctatcaaatttctgctatc 216  Q
    |||| |||||||||||||||||||  |||| ||||||    
T  8466701 gatccattgggccacctgctatcaggtttccgctatc 8466665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 73 - 171
Target Start/End: Original strand, 10884062 - 10884161
Alignment:
Q  73 cctgataatgtgtttataagtgggaa-caatcctcacttcataa-ccggttttgtggggttgagttaggcccaaccatgatttttaagatgatatcagag 170  Q
    ||||| ||||||||||||||||||   |||||||||| ||| || ||||||||||||| ||| |||||||||||||| ||||| ||||||| ||||||||    
T  10884062 cctgacaatgtgtttataagtggggggcaatcctcacctcacaagccggttttgtggg-ttgtgttaggcccaaccacgatttctaagatggtatcagag 10884160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 69 - 160
Target Start/End: Original strand, 12688301 - 12688393
Alignment:
Q  69 atgacctgataatgtgtttataagtgggaacaatcctcacttcataa-ccggttttgtggggttgagttaggcccaaccatgatttttaagat 160  Q
    ||||||||| ||||||||||||||||||  ||||||| || ||| || || |||||||||||||| | |||| ||||||||||||| ||||||    
T  12688301 atgacctgacaatgtgtttataagtgggggcaatccttacctcacaagccagttttgtggggttgtgataggtccaaccatgatttctaagat 12688393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 73 - 223
Target Start/End: Original strand, 16050027 - 16050178
Alignment:
Q  73 cctgataatgtgtttataagtgggaacaatcctcacttcataac-cggttttgtggggttgagttaggcccaaccatgatttttaagatgatatcagagc 171  Q
    ||||||||| ||||||||||||    |||||||||| ||| ||  | |||||||||||||| ||||| |||||||| || || ||| ||| |||||||||    
T  16050027 cctgataatttgtttataagtgaaggcaatcctcacctcacaagtcagttttgtggggttgtgttagacccaaccacgacttctaatatggtatcagagc 16050126  T
Q  172 atcttcaagatctattgggccacctgctatcaaatttctgctatcggaccac 223  Q
     |||||| |||   |||||||||||| ||||| ||||| | |||||| ||||    
T  16050127 ctcttcacgattctttgggccacctgttatcagatttccgttatcgggccac 16050178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 83 - 153
Target Start/End: Complemental strand, 24075382 - 24075311
Alignment:
Q  83 tgtttataagtgggaacaatcctcacttcataa-ccggttttgtggggttgagttaggcccaaccatgattt 153  Q
    ||||||||||||||  |||||||||| ||| || ||||||||||||||||| |||||||||||||| |||||    
T  24075382 tgtttataagtgggggcaatcctcacctcacaagccggttttgtggggttgtgttaggcccaaccacgattt 24075311  T

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Target: chr8; HSP #38
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 73 - 143
Target Start/End: Complemental strand, 38447513 - 38447442
Alignment:
Q  73 cctgataatgtgtttataagtgggaacaatcctcacttcataa-ccggttttgtggggttgagttaggccca 143  Q
    ||||| ||||||||||||||||||  |||||||||| ||| || ||||||||||||||||| ||||||||||    
T  38447513 cctgacaatgtgtttataagtgggggcaatcctcacctcacaagccggttttgtggggttgtgttaggccca 38447442  T

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Target: chr8; HSP #39
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 120 - 218
Target Start/End: Original strand, 10615440 - 10615538
Alignment:
Q  120 ttttgtggggttgagttaggcccaaccatgatttttaagatgatatcagagcatcttcaagatctattgggccacctgctatcaaatttctgctatcgg 218  Q
    ||||||||||||| |||||| | |||||| |||| ||||||| ||||||||| ||| ||||||| ||||  ||||||| |||||  |||| ||||||||    
T  10615440 ttttgtggggttgtgttaggtcaaaccataatttctaagatggtatcagagcctctccaagatccattgtaccacctgatatcaggtttccgctatcgg 10615538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 83 - 147
Target Start/End: Original strand, 4828301 - 4828366
Alignment:
Q  83 tgtttataagtgggaacaatcctcacttcataa-ccggttttgtggggttgagttaggcccaacca 147  Q
    ||||||||||||||  |||||||||| ||| || ||||||||||||||||| ||||||||||||||    
T  4828301 tgtttataagtgggggcaatcctcacctcacaagccggttttgtggggttgtgttaggcccaacca 4828366  T

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Target: chr8; HSP #41
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 73 - 153
Target Start/End: Original strand, 17477063 - 17477144
Alignment:
Q  73 cctgataatgtgtttataagtgggaacaatcctcacttcataa-ccggttttgtggggttgagttaggcccaaccatgattt 153  Q
    ||||| ||| ||||||||||||||  |||||||||| ||| || ||||||||||||||||| ||||||| |||||| |||||    
T  17477063 cctgacaatttgtttataagtgggggcaatcctcacctcacaagccggttttgtggggttgtgttaggctcaaccacgattt 17477144  T

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Target: chr8; HSP #42
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 73 - 160
Target Start/End: Complemental strand, 18004182 - 18004094
Alignment:
Q  73 cctgataatgtgtttataagtgggaacaatcctcacttcataac-cggttttgtggggttgagttaggcccaaccatgatttttaagat 160  Q
    ||||| ||| ||||||||||||||  ||||||||||  |||||  |||||||||| ||||| |||||||||||||| ||||| ||||||    
T  18004182 cctgacaatatgtttataagtgggggcaatcctcaccccataagtcggttttgtgaggttgtgttaggcccaaccaagatttctaagat 18004094  T

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Target: chr8; HSP #43
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 155 - 223
Target Start/End: Complemental strand, 18004332 - 18004264
Alignment:
Q  155 taagatgatatcagagcatcttcaagatctattgggccacctgctatcaaatttctgctatcggaccac 223  Q
    ||||||| ||||||||| ||| ||||||| |||||||||||||||||||  |||| |||||||| ||||    
T  18004332 taagatggtatcagagcctctccaagatccattgggccacctgctatcaggtttccgctatcgggccac 18004264  T

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Target: chr8; HSP #44
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 73 - 159
Target Start/End: Original strand, 39960189 - 39960277
Alignment:
Q  73 cctgataatgtgtttataagtgggaa-caatcctcacttcataa-ccggttttgtggggttgagttaggcccaaccatgatttttaaga 159  Q
    ||||| ||| ||||||||||||||   |||||||||| ||| || ||||||||||||||||| |||||||||||||| ||||| |||||    
T  39960189 cctgaaaatttgtttataagtggggggcaatcctcacctcacaagccggttttgtggggttgtgttaggcccaaccacgatttctaaga 39960277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 73 - 159
Target Start/End: Complemental strand, 42846692 - 42846604
Alignment:
Q  73 cctgataatgtgtttataagtgg-gaacaatcctcacttcataa-ccggttttgtggggttgagttaggcccaaccatgatttttaaga 159  Q
    ||||| ||| ||||||||||||| |  |||||||||| ||| || ||||||||||||||||| |||||||||||||| ||||| |||||    
T  42846692 cctgacaatttgtttataagtggagggcaatcctcacctcacaagccggttttgtggggttgtgttaggcccaaccacgatttctaaga 42846604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 73 - 147
Target Start/End: Complemental strand, 3157413 - 3157338
Alignment:
Q  73 cctgataatgtgtttataagtgggaa-caatcctcacttcataaccggttttgtggggttgagttaggcccaacca 147  Q
    ||||| ||||||||||||||||||   |||||||||| ||| || | |||||||||||||| ||||||||||||||    
T  3157413 cctgacaatgtgtttataagtggggggcaatcctcacctcacaagctgttttgtggggttgtgttaggcccaacca 3157338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 73 - 147
Target Start/End: Original strand, 8929015 - 8929090
Alignment:
Q  73 cctgataatgtgtttataagtgggaacaatcctcacttcataa-ccggttttgtggggttgagttaggcccaacca 147  Q
    ||||| ||||||||||||| ||||  |||||| ||| ||| || ||||||||||||||||| ||||||||||||||    
T  8929015 cctgacaatgtgtttataactgggggcaatccgcacctcacaagccggttttgtggggttgtgttaggcccaacca 8929090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 73 - 159
Target Start/End: Original strand, 10449998 - 10450085
Alignment:
Q  73 cctgataatgtgtttataagtgggaacaatcctcacttcataa-ccggttttgtggggttgagttaggcccaaccatgatttttaaga 159  Q
    ||||| |||||||||||||||| |  |||||||||| ||| || |||||||||| |||||| ||||||| |||||| ||||| |||||    
T  10449998 cctgacaatgtgtttataagtgtgggcaatcctcacctcagaagccggttttgtagggttgtgttaggctcaaccacgatttctaaga 10450085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 73 - 147
Target Start/End: Complemental strand, 26800598 - 26800523
Alignment:
Q  73 cctgataatgtgtttataagtgggaacaatcctcacttcataa-ccggttttgtggggttgagttaggcccaacca 147  Q
    ||||||||| ||| ||||||||||  ||||||||||  || || ||||||||||||||||| ||||||||||||||    
T  26800598 cctgataatttgtctataagtgggggcaatcctcaccacacaagccggttttgtggggttgtgttaggcccaacca 26800523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 74 - 203
Target Start/End: Complemental strand, 28213188 - 28213058
Alignment:
Q  74 ctgataatgtgtttataagtgggaacaatcctcacttcataa-ccggttttgtggggttgagttaggcccaaccatgatttttaagatgatatcagagca 172  Q
    |||| |||||||||||||||| |  |||||||||| ||| || ||  ||| | ||||||| |||||||||||||| ||||| ||| ||| ||||||| |     
T  28213188 ctgacaatgtgtttataagtgcgg-caatcctcacctcacaagccaatttggcggggttgtgttaggcccaaccacgatttctaatatggtatcagatcc 28213090  T
Q  173 t-cttcaagatctattgggccacctgctatca 203  Q
    | || |||||||| ||||||||||||||||||    
T  28213089 tcctccaagatctgttgggccacctgctatca 28213058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 67 - 188
Target Start/End: Complemental strand, 36917531 - 36917409
Alignment:
Q  67 taatgacctgataatgtgtttataagtgggaacaatcctcacttcataac-cggttttgtggggttgagttaggcccaaccatgatttttaagatgatat 165  Q
    ||||| ||||| ||||| ||||||||||||   ||||||||| ||| ||  | |||||||||||||| |||| || ||||||  |||| ||||||| |||    
T  36917531 taatggcctgacaatgtatttataagtgggggtaatcctcacatcacaagtcagttttgtggggttgtgttaagcacaaccaccatttctaagatggtat 36917432  T
Q  166 cagagcatcttcaagatctattg 188  Q
    |||||| ||| ||||||| ||||    
T  36917431 cagagcctctccaagatccattg 36917409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 82 - 147
Target Start/End: Original strand, 38475754 - 38475820
Alignment:
Q  82 gtgtttataagtgggaacaatcctcacttcataa-ccggttttgtggggttgagttaggcccaacca 147  Q
    |||||||||||||||  |||||||||| ||| || |||||||||| |||||| ||||||||||||||    
T  38475754 gtgtttataagtgggggcaatcctcacctcacaagccggttttgtagggttgtgttaggcccaacca 38475820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 134 - 203
Target Start/End: Complemental strand, 5676080 - 5676011
Alignment:
Q  134 gttaggcccaaccatgatttttaagatgatatcagagcatcttcaagatctattgggccacctgctatca 203  Q
    |||||| ||||||| ||||| ||||||||||||||||  ||||||||||  | | |||||||||||||||    
T  5676080 gttaggtccaaccacgatttctaagatgatatcagagtctcttcaagattcactaggccacctgctatca 5676011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 150 - 223
Target Start/End: Original strand, 7669495 - 7669568
Alignment:
Q  150 atttttaagatgatatcagagcatcttcaagatctattgggccacctgctatcaaatttctgctatcggaccac 223  Q
    |||||||||||| ||||| ||  ||||||||||| |||| ||||||||||||||  ||||  ||||||||||||    
T  7669495 atttttaagatggtatcaaagtctcttcaagatccattgagccacctgctatcaggtttccactatcggaccac 7669568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 99 - 171
Target Start/End: Original strand, 8716138 - 8716211
Alignment:
Q  99 caatcctcacttcataa-ccggttttgtggggttgagttaggcccaaccatgatttttaagatgatatcagagc 171  Q
    |||||||||| |||||| ||| ||||||||||||| ||||| |||||||| ||||| ||| ||| |||||||||    
T  8716138 caatcctcacctcataagccgattttgtggggttgtgttagacccaaccaagatttctaatatggtatcagagc 8716211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 119 - 200
Target Start/End: Complemental strand, 10615195 - 10615114
Alignment:
Q  119 gttttgtggggttgagttaggcccaaccatgatttttaagatgatatcagagcatcttcaagatctattgggccacctgcta 200  Q
    |||||||||||||| |||| |||||||||  |||| ||||||| | ||||||| ||| || |||||||||  ||||||||||    
T  10615195 gttttgtggggttgcgttaagcccaaccacaatttctaagatggtgtcagagcctctccatgatctattgaaccacctgcta 10615114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 118 - 159
Target Start/End: Original strand, 31827398 - 31827439
Alignment:
Q  118 ggttttgtggggttgagttaggcccaaccatgatttttaaga 159  Q
    ||||||||||||||  ||||||||||||||||||||||||||    
T  31827398 ggttttgtggggttatgttaggcccaaccatgatttttaaga 31827439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 73 - 153
Target Start/End: Original strand, 39743527 - 39743608
Alignment:
Q  73 cctgataatgtgtttataagtgggaacaatcctcacttcataa-ccggttttgtggggttgagttaggcccaaccatgattt 153  Q
    ||||| ||| ||||||||||| ||  |||||||||| ||| || ||| ||||||||||||| |||||||||||||| |||||    
T  39743527 cctgacaatttgtttataagttggggcaatcctcacctcacaagccgattttgtggggttgtgttaggcccaaccacgattt 39743608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 80 - 215
Target Start/End: Complemental strand, 42049766 - 42049629
Alignment:
Q  80 atgtgtttataagtgggaacaatcctcacttcataa-ccggttttgtggggttgagttaggcccaaccatgatttttaagatgatatcagagcatcttc- 177  Q
    |||||||||||||||||  ||||||||||  || || ||||||||||| ||||| | |||||| ||||| ||||| |||||||  |||||| | || ||     
T  42049766 atgtgtttataagtgggggcaatcctcaccccacaagccggttttgtgaggttgtggtaggcctaaccacgatttctaagatggcatcagaacctcctca 42049667  T
Q  178 aagatctattgggccacctgctatcaaatttctgctat 215  Q
    ||||||  ||||||| ||||||| | |||||| |||||    
T  42049666 aagatccgttgggccgcctgctacctaatttccgctat 42049629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 118 - 201
Target Start/End: Original strand, 6463002 - 6463086
Alignment:
Q  118 ggttttgtggggttgagttaggcccaaccatgatttttaagatgatatcagagcat-cttcaagatctattgggccacctgctat 201  Q
    ||||||||| ||||| |||| |||||||||  |||||||||||||||||||| | | || |||||||| ||| ||||||| ||||    
T  6463002 ggttttgtgcggttgtgttatgcccaaccacaatttttaagatgatatcagaacctcctccaagatcttttgtgccaccttctat 6463086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 83 - 138
Target Start/End: Original strand, 34843125 - 34843181
Alignment:
Q  83 tgtttataagtgggaacaatcctcacttcataa-ccggttttgtggggttgagttag 138  Q
    ||||||||||||||| |||||||||| ||| || ||||||||||||||||| |||||    
T  34843125 tgtttataagtgggagcaatcctcacctcacaagccggttttgtggggttgtgttag 34843181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 73 - 147
Target Start/End: Complemental strand, 35385898 - 35385822
Alignment:
Q  73 cctgataatgtgtttataagtgggaa-caatcctcacttcataa-ccggttttgtggggttgagttaggcccaacca 147  Q
    ||||||||| ||||||||||||||   |||||||||| |||||| ||||||||||||||||| |||| || ||||||    
T  35385898 cctgataatatgtttataagtggggggcaatcctcacctcataagccggttttgtggggttgtgttaagctcaacca 35385822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 116 - 203
Target Start/End: Original strand, 38476080 - 38476168
Alignment:
Q  116 ccggttttgtggggttgagttaggcccaaccatgatttttaagatgatatcagagcat-cttcaagatctattgggccacctgctatca 203  Q
    ||||||||||||| ||  ||||||||||||||  |||| ||||||| ||||||||| | || ||||||| |||||||||| | ||||||    
T  38476080 ccggttttgtgggattatgttaggcccaaccacaatttctaagatggtatcagagcctcctccaagatccattgggccacttactatca 38476168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #64
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 73 - 159
Target Start/End: Complemental strand, 15042756 - 15042669
Alignment:
Q  73 cctgataatgtgtttataagtgggaacaatcctcacttcataa-ccggttttgtggggttgagttaggcccaaccatgatttttaaga 159  Q
    ||||| ||||||||||||||||||  ||||| |||| ||  || ||| ||||||||||||| ||||||| |||||| ||||| |||||    
T  15042756 cctgacaatgtgtttataagtgggggcaatcatcacctcgcaaaccgattttgtggggttgtgttaggctcaaccacgatttctaaga 15042669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #65
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 80 - 158
Target Start/End: Complemental strand, 15686119 - 15686040
Alignment:
Q  80 atgtgtttataagtgggaacaatcctcacttcataa-ccggttttgtggggttgagttaggcccaaccatgatttttaag 158  Q
    ||||||||||||||||||| ||| ||||| ||| || ||||||||||||| ||| ||||| | |||||| ||||| ||||    
T  15686119 atgtgtttataagtgggaaaaattctcacctcacaagccggttttgtgggattgtgttagactcaaccacgatttctaag 15686040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #66
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 85 - 143
Target Start/End: Original strand, 16050271 - 16050329
Alignment:
Q  85 tttataagtgggaacaatcctcacttcataaccggttttgtggggttgagttaggccca 143  Q
    |||||||||| | ||||||||||| ||| | ||||||||||||||||| ||||| ||||    
T  16050271 tttataagtgaggacaatcctcacctcaaagccggttttgtggggttgtgttagaccca 16050329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #67
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 82 - 159
Target Start/End: Complemental strand, 22638256 - 22638178
Alignment:
Q  82 gtgtttataagtgggaacaatcctcacttcataa-ccggttttgtggggttgagttaggcccaaccatgatttttaaga 159  Q
    |||||||||||| ||  ||||||||||  || || ||||||||||||||||| |||| ||||||||| ||||| |||||    
T  22638256 gtgtttataagtaggggcaatcctcaccacacaagccggttttgtggggttgtgttaagcccaaccacgatttctaaga 22638178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #68
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 83 - 203
Target Start/End: Complemental strand, 26208325 - 26208203
Alignment:
Q  83 tgtttataagtgggaacaatcctcacttcataa-ccggttttgtggggttgagttaggcccaaccatgatttttaagatgatatcagagcatcttc-aag 180  Q
    ||||||||||||||  |||||  ||| |||||| || ||||| |||||||| |||||| ||| |||  |||| ||||||| ||||||||| |  || |||    
T  26208325 tgtttataagtgggggcaatctccacatcataagccagttttatggggttgtgttaggtccatccacaatttctaagatggtatcagagccttctctaag 26208226  T
Q  181 atctattgggccacctgctatca 203  Q
    |||  ||||||||||||||||||    
T  26208225 atccgttgggccacctgctatca 26208203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #69
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 153 - 223
Target Start/End: Complemental strand, 35683021 - 35682951
Alignment:
Q  153 tttaagatgatatcagagcatcttcaagatctattgggccacctgctatcaaatttctgctatcggaccac 223  Q
    ||||| ||| ||||| ||||||| ||||||| ||||||||||||||||| |  |||| |||||||| ||||    
T  35683021 tttaatatggtatcatagcatctccaagatccattgggccacctgctattaggtttccgctatcgggccac 35682951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #70
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 79 - 159
Target Start/End: Original strand, 25325650 - 25325731
Alignment:
Q  79 aatgtgtttataagtgggaacaatcctcacttcataa-ccggttttgtggggttgagttaggcccaaccatgatttttaaga 159  Q
    ||||||||||||||||||  |||||||| | ||| || || ||||||||| ||||  ||||||||||||| ||||| |||||    
T  25325650 aatgtgtttataagtgggtgcaatcctctcctcacaagccagttttgtggagttgttttaggcccaaccacgatttctaaga 25325731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #71
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 116 - 153
Target Start/End: Original strand, 34653192 - 34653229
Alignment:
Q  116 ccggttttgtggggttgagttaggcccaaccatgattt 153  Q
    ||||||||||||||||| |||||||||||||| |||||    
T  34653192 ccggttttgtggggttgtgttaggcccaaccacgattt 34653229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 80; Significance: 1e-37; HSPs: 77)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 69 - 203
Target Start/End: Original strand, 25620130 - 25620265
Alignment:
Q  69 atgacctgataatgtgtttataagtgggaacaatcctcacttcataa-ccggttttgtggggttgagttaggcccaaccatgatttttaagatgatatca 167  Q
    ||||||||| ||||||||||||||||||  |||||||||| ||| || ||||||||||||||||| |||||||||||||| ||||| ||||||| |||||    
T  25620130 atgacctgacaatgtgtttataagtgggggcaatcctcacctcacaagccggttttgtggggttgtgttaggcccaaccacgatttctaagatggtatca 25620229  T
Q  168 gagcatcttcaagatctattgggccacctgctatca 203  Q
    |||| ||| ||||||| |||||||||||||||||||    
T  25620230 gagcctctccaagatccattgggccacctgctatca 25620265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 69 - 216
Target Start/End: Original strand, 28080659 - 28080806
Alignment:
Q  69 atgacctgataatgtgtttataagtgggaacaatcctcacttcataac-cggttttgtggggttgagttaggcccaaccatgatttttaagatgatatca 167  Q
    ||||||||| ||||||||||||||| ||  ||||  |||||||| ||  |||||||||||||||  |||||  ||||||| ||||| |||||||||||||    
T  28080659 atgacctgacaatgtgtttataagtaggg-caattttcacttcacaagtcggttttgtggggttatgttagatccaaccacgatttctaagatgatatca 28080757  T
Q  168 gagcatcttcaagatctattgggccacctgctatcaaatttctgctatc 216  Q
    |||| |||||||||||||||||||||||||||||||| |||| ||||||    
T  28080758 gagcctcttcaagatctattgggccacctgctatcaagtttccgctatc 28080806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 73 - 223
Target Start/End: Complemental strand, 36277312 - 36277161
Alignment:
Q  73 cctgataatgtgtttataagtgggaacaatcctcacttcataac-cggttttgtggggttgagttaggcccaaccatgatttttaagatgatatcagagc 171  Q
    ||||| ||||||||||||||||||  |||||||||| ||| ||  || ||||||||||||| ||||| |||||||| ||||| ||||||| |||||||||    
T  36277312 cctgacaatgtgtttataagtgggggcaatcctcacctcacaagtcgattttgtggggttgtgttagtcccaaccacgatttctaagatgttatcagagc 36277213  T
Q  172 atcttcaagatctattgggccacctgctatcaaatttctgctatcggaccac 223  Q
     ||| ||||||| |||||||||||| ||||||  |||| |||||||||||||    
T  36277212 ctctccaagatccattgggccacctactatcaggtttccgctatcggaccac 36277161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 79 - 183
Target Start/End: Complemental strand, 3038164 - 3038059
Alignment:
Q  79 aatgtgtttataagtgggaacaatcctcacttcataa-ccggttttgtggggttgagttaggcccaaccatgatttttaagatgatatcagagcatcttc 177  Q
    ||||||||||||||||||  |||||||||| ||| || ||||||||||||||||| |||||||||||||||||||| |||||| |||||||||| |||||    
T  3038164 aatgtgtttataagtgggggcaatcctcacgtcacaagccggttttgtggggttgtgttaggcccaaccatgatttctaagataatatcagagcctcttc 3038065  T
Q  178 aagatc 183  Q
    ||||||    
T  3038064 aagatc 3038059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 73 - 203
Target Start/End: Original strand, 29469603 - 29469734
Alignment:
Q  73 cctgataatgtgtttataagtgggaacaatcctcacttcataa-ccggttttgtggggttgagttaggcccaaccatgatttttaagatgatatcagagc 171  Q
    ||||| ||||||||||||||||||  |||||||||| | | || ||||||||||||||||| |||||||||||||| ||||| ||| ||| |||||||||    
T  29469603 cctgacaatgtgtttataagtgggggcaatcctcaccttacaagccggttttgtggggttgtgttaggcccaaccacgatttctaatatggtatcagagc 29469702  T
Q  172 atcttcaagatctattgggccacctgctatca 203  Q
     ||| ||||||| ||||||||||||| |||||    
T  29469703 ctctccaagatccattgggccacctgttatca 29469734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 73 - 223
Target Start/End: Original strand, 21861292 - 21861443
Alignment:
Q  73 cctgataatgtgtttataagtgggaacaatcctcacttcataa-ccggttttgtggggttgagttaggcccaaccatgatttttaagatgatatcagagc 171  Q
    ||||| |||||||||||||||| |  |||||||||| | | || ||||||||||||| ||| ||||||||||||||  |||| ||||||| |||||||||    
T  21861292 cctgacaatgtgtttataagtgagggcaatcctcaccttacaagccggttttgtgggattgtgttaggcccaaccaccatttctaagatggtatcagagc 21861391  T
Q  172 atcttcaagatctattgggccacctgctatcaaatttctgctatcggaccac 223  Q
     ||| ||||||| ||||||||||||| |||||  |||| |||||||| ||||    
T  21861392 ctctccaagatccattgggccacctgttatcaggtttccgctatcgggccac 21861443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 69 - 217
Target Start/End: Complemental strand, 18826578 - 18826429
Alignment:
Q  69 atgacctgataatgtgtttataagtgggaacaatcctcacttcataaccgg-ttttgtggggttgagttaggcccaaccatgatttttaagatgatatca 167  Q
    ||||||||| ||||||||||||||||||   ||| ||||  ||| || | | ||||||||||||| ||||||  ||||||| |||| |||||||||||||    
T  18826578 atgacctgacaatgtgtttataagtgggggtaattctcaactcacaagctgattttgtggggttgtgttaggttcaaccataatttctaagatgatatca 18826479  T
Q  168 gagcatcttcaagatctattgggccacctgctatcaaatttctgctatcg 217  Q
    |||| ||||||||||| | || |||| ||||||||||||||| |||||||    
T  18826478 gagcctcttcaagatccactgagccatctgctatcaaatttccgctatcg 18826429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 83 - 223
Target Start/End: Original strand, 10903093 - 10903234
Alignment:
Q  83 tgtttataagtgggaacaatcctcacttcataa-ccggttttgtggggttgagttaggcccaaccatgatttttaagatgatatcagagcatcttcaaga 181  Q
    ||||||||||| ||   ||||||||| ||| || |||||||||||| |||| ||||| |||||||| ||||  ||| ||||||||||||| ||| |||||    
T  10903093 tgtttataagtaggggtaatcctcacctcacaagccggttttgtggagttgtgttagccccaaccacgattactaaaatgatatcagagcttctccaaga 10903192  T
Q  182 tctattgggccacctgctatcaaatttctgctatcggaccac 223  Q
    || ||||||||||||| |||||  |||| |||||||||||||    
T  10903193 tccattgggccacctgttatcatgtttccgctatcggaccac 10903234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 120 - 203
Target Start/End: Original strand, 33834237 - 33834320
Alignment:
Q  120 ttttgtggggttgagttaggcccaaccatgatttttaagatgatatcagagcatcttcaagatctattgggccacctgctatca 203  Q
    ||||||||||||| ||||||||||||||  |||| ||||||| ||||||||| ||| ||||||| |||||||||||||||||||    
T  33834237 ttttgtggggttgtgttaggcccaaccaccatttctaagatggtatcagagcctctccaagatccattgggccacctgctatca 33834320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 73 - 203
Target Start/End: Original strand, 34027391 - 34027522
Alignment:
Q  73 cctgataatgtgtttataagtgggaacaatcctcacttcataa-ccggttttgtggggttgagttaggcccaaccatgatttttaagatgatatcagagc 171  Q
    ||||| ||| ||||||||||||||  |||||||||| ||| || ||||||||||||||||| |||||||||||||| ||||| ||| ||| ||| |||||    
T  34027391 cctgacaatttgtttataagtgggggcaatcctcacctcacaagccggttttgtggggttgtgttaggcccaaccacgatttctaatatggtattagagc 34027490  T
Q  172 atcttcaagatctattgggccacctgctatca 203  Q
     |||||| |||   |||||||||||| |||||    
T  34027491 ctcttcacgattctttgggccacctgttatca 34027522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 120 - 223
Target Start/End: Complemental strand, 36993346 - 36993243
Alignment:
Q  120 ttttgtggggttgagttaggcccaaccatgatttttaagatgatatcagagcatcttcaagatctattgggccacctgctatcaaatttctgctatcgga 219  Q
    ||||||||  ||| |||||  ||||||||||||| ||||||| ||||||||| ||||||||||| |||||||||| |||||||| ||||| ||||| |||    
T  36993346 ttttgtggaattgtgttagatccaaccatgatttctaagatggtatcagagcctcttcaagatccattgggccacgtgctatcagatttccgctattgga 36993247  T
Q  220 ccac 223  Q
    ||||    
T  36993246 ccac 36993243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 69 - 203
Target Start/End: Complemental strand, 48661645 - 48661510
Alignment:
Q  69 atgacctgataatgtgtttataagtgggaacaatcctcacttcataa-ccggttttgtggggttgagttaggcccaaccatgatttttaagatgatatca 167  Q
    ||||||||| ||||| |||||| |||||  |||||||||| ||| || ||||||||||| | ||| ||||| |||||||| ||||| ||| |||||||||    
T  48661645 atgacctgacaatgtatttataggtgggggcaatcctcacctcacaagccggttttgtgagattgtgttagacccaaccacgatttctaatatgatatca 48661546  T
Q  168 gagcatcttcaagatctattgggccacctgctatca 203  Q
    |||| |||| |||| | |||| ||||||||||||||    
T  48661545 gagcctctttaagaaccattgagccacctgctatca 48661510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 73 - 223
Target Start/End: Original strand, 1596592 - 1596742
Alignment:
Q  73 cctgataatgtgtttataagtgggaacaatcctcacttcataaccggttttgtggggttgagttaggcccaaccatgatttttaagatgatatcagagca 172  Q
    ||||| |||||||| |||||||||  |||||||||| | | || | | |||||||||||| |||||||| |||||  |||| ||||||| |||||||||     
T  1596592 cctgacaatgtgttaataagtgggggcaatcctcaccttacaagccggtttgtggggttgtgttaggcctaaccacaatttctaagatggtatcagagcc 1596691  T
Q  173 tcttcaagatctattgggccacctgctatcaaatttctgctatcggaccac 223  Q
    ||| ||||||| |||||||||| || |||||  |||| |||||||| ||||    
T  1596692 tctccaagatccattgggccacatgttatcaggtttccgctatcgggccac 1596742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 73 - 170
Target Start/End: Complemental strand, 48243523 - 48243425
Alignment:
Q  73 cctgataatgtgtttataagtgggaacaatcctcacttcataa-ccggttttgtggggttgagttaggcccaaccatgatttttaagatgatatcagag 170  Q
    ||||| ||||||||||||||||||  |||||||||  | | || ||||||||||||||||| ||||| |||||||||||||||||||||| ||||||||    
T  48243523 cctgacaatgtgtttataagtgggggcaatcctcatcttacaagccggttttgtggggttgtgttagacccaaccatgatttttaagatggtatcagag 48243425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 73 - 217
Target Start/End: Original strand, 4886327 - 4886472
Alignment:
Q  73 cctgataatgtgtttataagtgggaacaatcctcacttcataa-ccggttttgtggggttgagttaggcccaaccatgatttttaagatgatatcagagc 171  Q
    ||||| ||| ||||||| | ||||  |||||||||| ||| || ||||||| | | ||||| |||||||||||||| ||||| ||||||| |||||| |     
T  4886327 cctgacaatatgtttattaatgggggcaatcctcacctcacaagccggtttggcgaggttgtgttaggcccaaccacgatttctaagatggtatcagggt 4886426  T
Q  172 atcttcaagatctattgggccacctgctatcaaatttctgctatcg 217  Q
     ||| ||||||| |||||||||||||||||||| ||||| ||||||    
T  4886427 ctctccaagatccattgggccacctgctatcaagtttctactatcg 4886472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 73 - 195
Target Start/End: Original strand, 17202177 - 17202300
Alignment:
Q  73 cctgataatgtgtttataagtgggaacaatcctcacttcataa-ccggttttgtggggttgagttaggcccaaccatgatttttaagatgatatcagagc 171  Q
    ||||| ||| ||||||||||||||  |||| ||||  ||| || ||||||||||||||||| |||||||||||||| ||||||||| ||| |||||||||    
T  17202177 cctgacaatttgtttataagtgggggcaattctcatctcacaagccggttttgtggggttgtgttaggcccaaccacgatttttaatatggtatcagagc 17202276  T
Q  172 atcttcaagatctattgggccacc 195  Q
     |||||| |||   ||||||||||    
T  17202277 ctcttcatgattctttgggccacc 17202300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 74 - 203
Target Start/End: Complemental strand, 26240001 - 26239870
Alignment:
Q  74 ctgataatgtgtttataagtgggaacaatcctcacttcataac-cggttttgtggggttgagttaggcccaaccatgatttttaagatgatatcagagca 172  Q
    |||| ||||||||||||||||||  |||||||||| ||| ||  |||| ||||||||||| ||||| ||||||||  |||| ||||||| |||||||||     
T  26240001 ctgacaatgtgtttataagtgggggcaatcctcacctcacaagtcggtattgtggggttgtgttagacccaaccacaatttctaagatggtatcagagcc 26239902  T
Q  173 t-cttcaagatctattgggccacctgctatca 203  Q
    | || |||||||  ||||||||||||||||||    
T  26239901 tcctccaagatccgttgggccacctgctatca 26239870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 79 - 203
Target Start/End: Original strand, 31892155 - 31892281
Alignment:
Q  79 aatgtgtttataagtgggaacaatcctcacttcataa-ccggttttgtggggttgagttaggcccaa-ccatgatttttaagatgatatcagagcatctt 176  Q
    ||||| |||||||||||| ||||||||||| ||| || |||||||||||| |||  ||||||||||| ||  ||| | |||||||  |||||||| |||     
T  31892155 aatgtatttataagtggggacaatcctcacctcacaagccggttttgtggagttatgttaggcccaaaccccgatctctaagatggaatcagagcctctc 31892254  T
Q  177 caagatctattgggccacctgctatca 203  Q
    ||||| |||||||||||||||||||||    
T  31892255 caagacctattgggccacctgctatca 31892281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 74 - 159
Target Start/End: Complemental strand, 48243146 - 48243060
Alignment:
Q  74 ctgataatgtgtttataagtgggaacaatcctcacttcataa-ccggttttgtggggttgagttaggcccaaccatgatttttaaga 159  Q
    |||| ||||||||||||||||||  |||||||||| ||| || ||||||||||||||||| |||||||||||||| ||||| |||||    
T  48243146 ctgacaatgtgtttataagtgggggcaatcctcacctcacaagccggttttgtggggttgtgttaggcccaaccacgatttgtaaga 48243060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 79 - 223
Target Start/End: Original strand, 4506936 - 4507081
Alignment:
Q  79 aatgtgtttataagtgggaacaatcctcacttcataac-cggttttgtggggttgagttaggcccaaccatgatttttaagatgatatcagagcatcttc 177  Q
    |||||||||||| || | | |||||||||| ||| ||  ||||||| |||||||| ||||| |||||| | ||||| ||||||  ||||||||| | |||    
T  4506936 aatgtgtttatacgttgcagcaatcctcacctcacaagtcggttttatggggttgtgttagacccaactacgatttctaagattgtatcagagccttttc 4507035  T
Q  178 aagatctattgggccacctgctatcaaatttctgctatcggaccac 223  Q
    |||||| |||||| |||||||||||| ||||| | |||| ||||||    
T  4507036 aagatccattgggtcacctgctatcagatttccgttatcagaccac 4507081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 77 - 203
Target Start/End: Complemental strand, 33996393 - 33996269
Alignment:
Q  77 ataatgtgtttataagtgggaacaatcctcacttcataac-cggttttgtggggttgagttaggcccaaccatgatttttaagatgatatcagagcatct 175  Q
    ||||||| ||||||||||||  ||||| |||| ||| ||  ||||||||||| |||| |||||||||||||| ||||| ||||||| ||||||||| |||    
T  33996393 ataatgtatttataagtgggggcaatcttcacctcacaagtcggttttgtggagttgtgttaggcccaaccacgatttctaagatggtatcagagcctct 33996294  T
Q  176 tcaagatctattgggccacctgctatca 203  Q
     |   ||| |||||||||||||||||||    
T  33996293 cc---atccattgggccacctgctatca 33996269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 73 - 168
Target Start/End: Complemental strand, 2544533 - 2544437
Alignment:
Q  73 cctgataatgtgtttataagtgggaacaatcctcacttcataac-cggttttgtggggttgagttaggcccaaccatgatttttaagatgatatcag 168  Q
    ||||| ||| ||||||||||||||  |||||||||| ||| ||  |||||||||||||||| |||||||||||||| ||||||||| ||| ||||||    
T  2544533 cctgacaatttgtttataagtgggggcaatcctcacctcacaagtcggttttgtggggttgtgttaggcccaaccacgatttttaatatggtatcag 2544437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 73 - 159
Target Start/End: Original strand, 6634853 - 6634940
Alignment:
Q  73 cctgataatgtgtttataagtgggaacaatcctcacttcataaccg-gttttgtggggttgagttaggcccaaccatgatttttaaga 159  Q
    ||||| ||| ||||||||||||||  |||||||||| |||||| |  |||||||||||||| |||||||||||||||||||| |||||    
T  6634853 cctgacaatttgtttataagtgggggcaatcctcacctcataagctagttttgtggggttgtgttaggcccaaccatgatttctaaga 6634940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 85 - 203
Target Start/End: Complemental strand, 31257341 - 31257222
Alignment:
Q  85 tttataagtgggaacaatcctcacttcataa-ccggttttgtggggttgagttaggcccaaccatgatttttaagatgatatcagagcatcttcaagatc 183  Q
    ||||||||||||  ||||||| | |||| || ||||||||||||||||| |||||||||||||| ||||| ||| ||| ||||||||| |||||| |||     
T  31257341 tttataagtgggggcaatccttaattcacaagccggttttgtggggttgtgttaggcccaaccacgatttctaatatggtatcagagcttcttcacgatt 31257242  T
Q  184 tattgggccacctgctatca 203  Q
      |||||||| ||| |||||    
T  31257241 ctttgggccatctgttatca 31257222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 73 - 159
Target Start/End: Original strand, 34027625 - 34027712
Alignment:
Q  73 cctgataatgtgtttataagtgggaacaatcctcacttcataa-ccggttttgtggggttgagttaggcccaaccatgatttttaaga 159  Q
    ||||| ||| ||||||||||||||  |||||||||||||| || ||||||||||||||||| ||||||||||| || ||||| |||||    
T  34027625 cctgacaatttgtttataagtgggggcaatcctcacttcacaagccggttttgtggggttgtgttaggcccaatcacgatttctaaga 34027712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 74 - 160
Target Start/End: Complemental strand, 36993159 - 36993072
Alignment:
Q  74 ctgataatgtgtttataagtgggaacaatcctcacttcataacc-ggttttgtggggttgagttaggcccaaccatgatttttaagat 160  Q
    |||| ||||||||||||||| ||| |||| ||||| ||| || | ||||||||||||||| |||||||||||||||||||| ||||||    
T  36993159 ctgacaatgtgtttataagtaggagcaatgctcacctcacaagctggttttgtggggttgtgttaggcccaaccatgatttctaagat 36993072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 122 - 220
Target Start/End: Complemental strand, 10882275 - 10882177
Alignment:
Q  122 ttgtggggttgagttaggcccaaccatgatttttaagatgatatcagagcatcttcaagatctattgggccacctgctatcaaatttctgctatcggac 220  Q
    ||||||||||| |||||||||||||| ||||| ||||||| ||||||||| |||||| |||   |||||||||||| |||||  |||| | ||||||||    
T  10882275 ttgtggggttgtgttaggcccaaccacgatttctaagatggtatcagagcctcttcacgattctttgggccacctgttatcaggtttccgttatcggac 10882177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 114 - 200
Target Start/End: Original strand, 21821846 - 21821932
Alignment:
Q  114 aaccggttttgtggggttgagttaggcccaaccatgatttttaagatgatatcagagcatcttcaagatctattgggccacctgcta 200  Q
    ||||| ||||||||| ||| |||||||||||||| ||||| ||||||| ||||||||| ||||||||||   |||||||| ||||||    
T  21821846 aaccgattttgtgggattgtgttaggcccaaccacgatttctaagatggtatcagagcctcttcaagatacgttgggccaactgcta 21821932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 73 - 160
Target Start/End: Complemental strand, 21055039 - 21054951
Alignment:
Q  73 cctgataatgtgtttataagtgggaacaatcctcacttcataa-ccggttttgtggggttgagttaggcccaaccatgatttttaagat 160  Q
    ||||| ||| ||||||||||||||  |||||||||| ||| || ||||||||||||||||| ||||||||||||||  |||| ||||||    
T  21055039 cctgacaatatgtttataagtgggggcaatcctcacctcacaagccggttttgtggggttgtgttaggcccaaccaccatttctaagat 21054951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 75 - 223
Target Start/End: Original strand, 22574605 - 22574750
Alignment:
Q  75 tgataatgtgtttataagtgggaacaatcctcacttcataa-ccggttttgtggggttgagttaggcccaaccatgatttttaagatgatatcagagcat 173  Q
    ||||||| |||||||||||| || |||| ||||| ||| || |||||||||||||     ||||||| ||||||  |||| || |||| ||| ||||  |    
T  22574605 tgataatctgtttataagtgagagcaattctcacctcacaagccggttttgtgggc----gttaggctcaaccacaatttctatgatggtataagagtct 22574700  T
Q  174 cttcaagatctattgggccacctgctatcaaatttctgctatcggaccac 223  Q
    || ||||||| |||||||||||||||||||  |||| |||||||||||||    
T  22574701 ctccaagatccattgggccacctgctatcaggtttcagctatcggaccac 22574750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 85 - 183
Target Start/End: Original strand, 11743038 - 11743137
Alignment:
Q  85 tttataagtgggaacaatcctcacttcataa-ccggttttgtggggttgagttaggcccaaccatgatttttaagatgatatcagagcatcttcaagatc 183  Q
    ||||||| ||||| ||||| |||| ||| || ||||||||||||  ||| ||||| |  ||||| ||||||||||||||||||||||| |||||||||||    
T  11743038 tttataaatgggagcaatcatcacatcacaaaccggttttgtggaattgtgttagacttaaccacgatttttaagatgatatcagagcctcttcaagatc 11743137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 73 - 203
Target Start/End: Complemental strand, 31485745 - 31485614
Alignment:
Q  73 cctgataatgtgtttataagtgggaacaatcctcacttcataa-ccggttttgtggggttgagttaggcccaaccatgatttttaagatgatatcagagc 171  Q
    ||||| ||||| ||||||||||||  |||||||||| | | || |||||||||||  |||| |||||||| |||||  |||| ||||||| ||| |||||    
T  31485745 cctgacaatgtttttataagtgggggcaatcctcacctgacaagccggttttgtgaagttgtgttaggcctaaccacaatttctaagatggtataagagc 31485646  T
Q  172 atcttcaagatctattgggccacctgctatca 203  Q
      || ||||||| |||||||||||| ||||||    
T  31485645 cgctacaagatccattgggccacctactatca 31485614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 69 - 159
Target Start/End: Original strand, 31892381 - 31892472
Alignment:
Q  69 atgacctgataatgtgtttataagtgggaacaatcctcacttcataa-ccggttttgtggggttgagttaggcccaaccatgatttttaaga 159  Q
    ||||| ||| ||||| |||||||||||| |||||| |||| ||| || |||||||||||||| || |||||||||||||| ||||| |||||    
T  31892381 atgacatgacaatgtatttataagtggggacaatcttcacctcacaagccggttttgtggggatgtgttaggcccaaccacgatttctaaga 31892472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 116 - 171
Target Start/End: Complemental strand, 40121966 - 40121911
Alignment:
Q  116 ccggttttgtggggttgagttaggcccaaccatgatttttaagatgatatcagagc 171  Q
    ||||||||||||||||| |||||||||||||| ||||| ||||||| |||||||||    
T  40121966 ccggttttgtggggttgtgttaggcccaaccacgatttctaagatggtatcagagc 40121911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 74 - 223
Target Start/End: Complemental strand, 2404493 - 2404343
Alignment:
Q  74 ctgataatgtgtttataagtgggaacaatcctcacttcataac-cggttttgtggggttgagttaggcccaaccatgatttttaagatgatatcagagca 172  Q
    |||| ||||||||||||||| ||  ||||||||||  || ||  ||||||| | ||| || |||| || |||||| ||||| ||||||| |||||||||     
T  2404493 ctgacaatgtgtttataagtaggggcaatcctcaccccacaagtcggttttatagggctgtgttaagctcaaccacgatttctaagatggtatcagagcc 2404394  T
Q  173 tcttcaagatctattgggccacctgctatcaaatttctgctatcggaccac 223  Q
    ||||| | ||| |||||| ||||||||||||  |||| ||||| |||||||    
T  2404393 tcttcgaaatccattgggtcacctgctatcaggtttccgctattggaccac 2404343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 119 - 220
Target Start/End: Complemental strand, 5871851 - 5871749
Alignment:
Q  119 gttttgtggggttgagttaggcccaaccatgatttttaagatgatatcagagcat-cttcaagatctattgggccacctgctatcaaatttctgctatcg 217  Q
    ||||||| |||||| ||||| |||||||| ||||| ||||||||||||||||| | | | |||||| |||| | ||||| |||||| |||| ||||||||    
T  5871851 gttttgtagggttgtgttagtcccaaccacgatttctaagatgatatcagagcctccgttaagatccattgagtcacctactatcatatttttgctatcg 5871752  T
Q  218 gac 220  Q
    |||    
T  5871751 gac 5871749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 74 - 147
Target Start/End: Complemental strand, 32278970 - 32278896
Alignment:
Q  74 ctgataatgtgtttataagtgggaacaatcctcacttcataa-ccggttttgtggggttgagttaggcccaacca 147  Q
    |||| |||||||||||||||||| |||||| |||| |||||| ||||||||||| ||||| ||||||| ||||||    
T  32278970 ctgacaatgtgtttataagtggggacaatcgtcacctcataagccggttttgtgaggttgtgttaggctcaacca 32278896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 73 - 178
Target Start/End: Original strand, 40746263 - 40746369
Alignment:
Q  73 cctgataatgtgtttataagtgggaacaatcctcacttcataa-ccggttttgtggggttgagttaggcccaaccatgatttttaagatgatatcagagc 171  Q
    ||||| ||| |||||||||||| |  |||||||||| |||||| ||| ||||||||||||| ||||||||||||||  |||| ||| ||| ||| |||||    
T  40746263 cctgacaatttgtttataagtgagggcaatcctcacctcataagccgattttgtggggttgtgttaggcccaaccacaatttctaatatggtattagagc 40746362  T
Q  172 atcttca 178  Q
     ||||||    
T  40746363 ctcttca 40746369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 79 - 160
Target Start/End: Original strand, 47710447 - 47710529
Alignment:
Q  79 aatgtgtttataagtgggaacaatcctcacttcataa-ccggttttgtggggttgagttaggcccaaccatgatttttaagat 160  Q
    ||||||||||||||||||  |||||||||| ||| || || |||||||||||||| ||||||||||||||  |||| ||||||    
T  47710447 aatgtgtttataagtgggggcaatcctcacctcacaagccagttttgtggggttgtgttaggcccaaccaccatttctaagat 47710529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 79 - 160
Target Start/End: Original strand, 47722103 - 47722185
Alignment:
Q  79 aatgtgtttataagtgggaacaatcctcacttcataa-ccggttttgtggggttgagttaggcccaaccatgatttttaagat 160  Q
    ||||||||||||||||||  |||||||||| ||| || || |||||||||||||| ||||||||||||||  |||| ||||||    
T  47722103 aatgtgtttataagtgggggcaatcctcacctcacaagccagttttgtggggttgtgttaggcccaaccaccatttctaagat 47722185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 73 - 153
Target Start/End: Original strand, 29469838 - 29469919
Alignment:
Q  73 cctgataatgtgtttataagtgggaacaatcctcacttcataa-ccggttttgtggggttgagttaggcccaaccatgattt 153  Q
    ||||| ||||||||||||||||||  |||||||||| | | || |||||||||||| |||| |||||||||||||| |||||    
T  29469838 cctgacaatgtgtttataagtgggggcaatcctcaccttacaagccggttttgtggagttgtgttaggcccaaccacgattt 29469919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 84 - 171
Target Start/End: Complemental strand, 23796097 - 23796010
Alignment:
Q  84 gtttataagtgggaacaatcctcacttcataa-ccggttttgtggggttgagttaggcccaaccatgatttttaagatgatatcagagc 171  Q
    |||||||||||||  |||||||||| ||| || ||| |||| ||||| || ||||||| |||||||||||||||||||| |||||||||    
T  23796097 gtttataagtgggg-caatcctcacctcacaagccgattttatggggatgtgttaggctcaaccatgatttttaagatggtatcagagc 23796010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 73 - 147
Target Start/End: Original strand, 3392980 - 3393055
Alignment:
Q  73 cctgataatgtgtttataagtgggaacaatcctcacttcataa-ccggttttgtggggttgagttaggcccaacca 147  Q
    ||||| |||||||||||||||||| | ||| ||||| ||| || ||| ||||||||||||| ||||||||||||||    
T  3392980 cctgacaatgtgtttataagtggggaaaattctcacctcacaagccgattttgtggggttgtgttaggcccaacca 3393055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 73 - 147
Target Start/End: Original strand, 21861527 - 21861602
Alignment:
Q  73 cctgataatgtgtttataagtgggaacaatcctcacttcataa-ccggttttgtggggttgagttaggcccaacca 147  Q
    ||||| ||||||||||||||||||  |||||||||| | | || ||| ||||||||||||| ||||||||||||||    
T  21861527 cctgacaatgtgtttataagtgggggcaatcctcaccttacaagccgattttgtggggttgtgttaggcccaacca 21861602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 79 - 161
Target Start/End: Complemental strand, 23796264 - 23796181
Alignment:
Q  79 aatgtgtttataagtgggaacaatcctcacttcataaccgg-ttttgtggggttgagttaggcccaaccatgatttttaagatg 161  Q
    ||||||||||||||||||  ||||| |||| ||| ||   | ||||||||||||| ||||||| ||||||||||||||||||||    
T  23796264 aatgtgtttataagtgggggcaatcatcacctcacaaattgattttgtggggttgtgttaggctcaaccatgatttttaagatg 23796181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 73 - 203
Target Start/End: Complemental strand, 26562159 - 26562028
Alignment:
Q  73 cctgataatgtgtttataagtgggaacaatcctcacttcataa-ccggttttgtggggttgagttaggcccaaccatgatttttaagatgatatcagagc 171  Q
    ||||| ||| ||||||||||||||  ||||| |||| ||| || ||||||||||||||||  ||||||| ||||||  |||| ||| ||| ||||||||     
T  26562159 cctgacaatttgtttataagtgggggcaatcttcacctcacaagccggttttgtggggttatgttaggctcaaccaccatttctaatatggtatcagagt 26562060  T
Q  172 atcttcaagatctattgggccacctgctatca 203  Q
     |||||| |||   |||||||||||| |||||    
T  26562059 ctcttcacgattctttgggccacctgttatca 26562028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 80 - 220
Target Start/End: Complemental strand, 5872033 - 5871893
Alignment:
Q  80 atgtgtttataagtgggaacaatcctcacttcataa-ccggttttgtggggttgagttaggcccaaccatgatttttaagatgatatcagagcat-cttc 177  Q
    |||||||| ||||||||  |||||| ||||||| || ||| |||||| |||| | || || |||||||| ||||| ||||||||||||||||| | | |     
T  5872033 atgtgtttttaagtgggg-caatccccacttcacaagccgattttgtagggtagtgt-agtcccaaccacgatttctaagatgatatcagagcctgcgtt 5871936  T
Q  178 aagatctattgggccacctgctatcaaatttctgctatcggac 220  Q
    |||||| |||| | |||||||||||| ||||| ||||||||||    
T  5871935 aagatccattgagtcacctgctatcatatttccgctatcggac 5871893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 73 - 159
Target Start/End: Complemental strand, 43688245 - 43688159
Alignment:
Q  73 cctgataatgtgtttataagtgggaacaatcctcacttcataaccggttttgtggggttgagttaggcccaaccatgatttttaaga 159  Q
    ||||| ||||||||||||||||||  ||||||| || ||  || | | |||||||||||| |||||||||||||| ||||| |||||    
T  43688245 cctgacaatgtgtttataagtgggggcaatccttacctctcaagccggtttgtggggttgtgttaggcccaaccacgatttctaaga 43688159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 118 - 159
Target Start/End: Complemental strand, 7786294 - 7786253
Alignment:
Q  118 ggttttgtggggttgagttaggcccaaccatgatttttaaga 159  Q
    ||||||||||||||| |||||||||||||||||||| |||||    
T  7786294 ggttttgtggggttgtgttaggcccaaccatgatttctaaga 7786253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 114 - 171
Target Start/End: Complemental strand, 47955391 - 47955334
Alignment:
Q  114 aaccggttttgtggggttgagttaggcccaaccatgatttttaagatgatatcagagc 171  Q
    |||||||||||||||||||  ||||||||||| |||| || ||||||| |||||||||    
T  47955391 aaccggttttgtggggttgcattaggcccaacaatgaattctaagatggtatcagagc 47955334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 114 - 171
Target Start/End: Complemental strand, 47955472 - 47955415
Alignment:
Q  114 aaccggttttgtggggttgagttaggcccaaccatgatttttaagatgatatcagagc 171  Q
    |||||||||||||||||||  ||||||||||| |||| || ||||||| |||||||||    
T  47955472 aaccggttttgtggggttgcattaggcccaacaatgaattctaagatggtatcagagc 47955415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 114 - 171
Target Start/End: Complemental strand, 47955553 - 47955496
Alignment:
Q  114 aaccggttttgtggggttgagttaggcccaaccatgatttttaagatgatatcagagc 171  Q
    |||||||||||||||||||  ||||||||||| |||| || ||||||| |||||||||    
T  47955553 aaccggttttgtggggttgcattaggcccaacaatgaattctaagatggtatcagagc 47955496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 114 - 171
Target Start/End: Complemental strand, 47955634 - 47955577
Alignment:
Q  114 aaccggttttgtggggttgagttaggcccaaccatgatttttaagatgatatcagagc 171  Q
    |||||||||||||||||||  ||||||||||| |||| || ||||||| |||||||||    
T  47955634 aaccggttttgtggggttgcattaggcccaacaatgaattctaagatggtatcagagc 47955577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 114 - 171
Target Start/End: Complemental strand, 47955715 - 47955658
Alignment:
Q  114 aaccggttttgtggggttgagttaggcccaaccatgatttttaagatgatatcagagc 171  Q
    |||||||||||||||||||  ||||||||||| |||| || ||||||| |||||||||    
T  47955715 aaccggttttgtggggttgcattaggcccaacaatgaattctaagatggtatcagagc 47955658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 114 - 171
Target Start/End: Complemental strand, 47955796 - 47955739
Alignment:
Q  114 aaccggttttgtggggttgagttaggcccaaccatgatttttaagatgatatcagagc 171  Q
    |||||||||||||||||||  ||||||||||| |||| || ||||||| |||||||||    
T  47955796 aaccggttttgtggggttgcattaggcccaacaatgaattctaagatggtatcagagc 47955739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 86 - 153
Target Start/End: Complemental strand, 14541025 - 14540957
Alignment:
Q  86 ttataagtgggaacaatcctcacttcataac-cggttttgtggggttgagttaggcccaaccatgattt 153  Q
    |||||||||||  |||||| ||| ||||||  |||||||||||||||| ||||||||||||||| ||||    
T  14541025 ttataagtgggggcaatccacacctcataagtcggttttgtggggttgtgttaggcccaaccatcattt 14540957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 80 - 159
Target Start/End: Original strand, 15317557 - 15317637
Alignment:
Q  80 atgtgtttataagtgggaacaatcctcacttcataaccg-gttttgtggggttgagttaggcccaaccatgatttttaaga 159  Q
    |||||||||||||||||  |||||||||| ||| || |  ||||||||| |||| ||||||||||||||| |||| |||||    
T  15317557 atgtgtttataagtgggggcaatcctcacctcacaaactagttttgtggtgttgtgttaggcccaaccataatttctaaga 15317637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 99 - 170
Target Start/End: Complemental strand, 30727415 - 30727343
Alignment:
Q  99 caatcctcacttcataa-ccggttttgtggggttgagttaggcccaaccatgatttttaagatgatatcagag 170  Q
    |||||||||| ||| || ||||||||||| ||||||||||| ||| ||||  |||||||||||| ||||||||    
T  30727415 caatcctcacctcacaagccggttttgtgaggttgagttagtcccgaccagaatttttaagatggtatcagag 30727343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 80 - 171
Target Start/End: Original strand, 47849576 - 47849668
Alignment:
Q  80 atgtgtttataagtgggaacaatcctcacttcataacc-ggttttgtggggttgagttaggcccaaccatgatttttaagatgatatcagagc 171  Q
    |||||||||||||| ||  |||||||||| ||| |||| ||||||||||| ||| ||||||| ||||||  |  ||||||||| |||||||||    
T  47849576 atgtgtttataagttggggcaatcctcacctcacaacccggttttgtgggcttgtgttaggctcaaccacaaagtttaagatggtatcagagc 47849668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 116 - 171
Target Start/End: Original strand, 6782903 - 6782958
Alignment:
Q  116 ccggttttgtggggttgagttaggcccaaccatgatttttaagatgatatcagagc 171  Q
    ||||||||||||||||| ||||||| |||||| ||||| ||| ||| |||||||||    
T  6782903 ccggttttgtggggttgtgttaggctcaaccacgatttctaacatggtatcagagc 6782958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 83 - 153
Target Start/End: Complemental strand, 10882081 - 10882011
Alignment:
Q  83 tgtttataagtgggaacaatcctcacttcataa-ccggttttgtggggttgagttaggcccaaccatgattt 153  Q
    ||||||||||||||  |||||||||| ||| || |||||||||||||||| | ||||||||||||| |||||    
T  10882081 tgtttataagtgggggcaatcctcacctcacaagccggttttgtggggttta-ttaggcccaaccacgattt 10882011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 79 - 153
Target Start/End: Complemental strand, 11211758 - 11211684
Alignment:
Q  79 aatgtgtttataagtgggaacaatcctcacttcataa-ccggttttgtggggttgagttaggcccaaccatgattt 153  Q
    ||||| ||||||||||||  |||||||||| ||| || ||||||||||||||||| ||| |||||||||| |||||    
T  11211758 aatgtctttataagtgggg-caatcctcacctcacaagccggttttgtggggttgtgttgggcccaaccacgattt 11211684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 142 - 189
Target Start/End: Original strand, 20305358 - 20305405
Alignment:
Q  142 caaccatgatttttaagatgatatcagagcatcttcaagatctattgg 189  Q
    |||||| ||||||||||||| ||||||||| ||||||||||| |||||    
T  20305358 caaccacgatttttaagatggtatcagagcctcttcaagatccattgg 20305405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 74 - 160
Target Start/End: Complemental strand, 36277076 - 36276989
Alignment:
Q  74 ctgataatgtgtttataagtgggaacaatcctcacttcataa-ccggttttgtggggttgagttaggcccaaccatgatttttaagat 160  Q
    |||| |||||||||||||||||| ||||| ||||| ||| || | |||||| |||| ||| |||||||| ||||| ||||| ||||||    
T  36277076 ctgacaatgtgtttataagtggggacaattctcacctcacaagcaggttttatgggattgtgttaggcctaaccacgatttctaagat 36276989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 120 - 203
Target Start/End: Complemental strand, 44874616 - 44874533
Alignment:
Q  120 ttttgtggggttgagttaggcccaaccatgatttttaagatgatatcagagcatcttcaagatctattgggccacctgctatca 203  Q
    |||| |||| ||| |||||||| |||||  || | ||||||| ||||||||  ||||||||||| |||||| ||||||||||||    
T  44874616 ttttatgggcttgtgttaggccaaaccacaatgtctaagatggtatcagagtctcttcaagatccattgggtcacctgctatca 44874533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 69 - 158
Target Start/End: Complemental strand, 6001525 - 6001435
Alignment:
Q  69 atgacctgataatgtgtttataagtgggaacaatcctcacttca-taaccggttttgtggggttgagttaggcccaaccatgatttttaag 158  Q
    ||||||||| ||| ||||||||||||||  |||||||||| |||  ||||| |||||| |||||  ||||  |||||||| ||||||||||    
T  6001525 atgacctgacaatatgtttataagtgggggcaatcctcacctcagaaaccgattttgtagggttatgttaaacccaaccacgatttttaag 6001435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 73 - 154
Target Start/End: Complemental strand, 31485510 - 31485429
Alignment:
Q  73 cctgataatgtgtttataagtgggaacaatcctcacttca-taaccggttttgtggggttgagttaggcccaaccatgatttt 154  Q
    ||||| ||||||||||||||||||  |||||||||| |||  ||| ||||||||| ||||| |||||| ||||||| ||||||    
T  31485510 cctgacaatgtgtttataagtgggggcaatcctcacatcacaaactggttttgtgaggttgtgttagg-ccaaccacgatttt 31485429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 73 - 145
Target Start/End: Complemental strand, 32879701 - 32879627
Alignment:
Q  73 cctgataatgtgtttataagtgggaa-caatcctcacttcataa-ccggttttgtggggttgagttaggcccaac 145  Q
    ||||| ||||||||||||||||||   |||||||||| ||| || ||||||||| ||||||| ||||||||||||    
T  32879701 cctgacaatgtgtttataagtggggggcaatcctcacctcacaagccggttttgcggggttgtgttaggcccaac 32879627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 72 - 153
Target Start/End: Complemental strand, 44874433 - 44874351
Alignment:
Q  72 acctgataatgtgtttataagtgggaacaatcctcacttca-taaccggttttgtggggttgagttaggcccaaccatgattt 153  Q
    |||||| ||||||||||||||||||   ||||||||| |||  ||||| ||||||  ||||| |||||||||||||| |||||    
T  44874433 acctgacaatgtgtttataagtgggggaaatcctcacctcacaaaccgattttgtatggttgtgttaggcccaaccacgattt 44874351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #70
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 82 - 202
Target Start/End: Complemental strand, 48417592 - 48417470
Alignment:
Q  82 gtgtttataagtgggaacaatcctcacttcataa-ccggttttgtggggttgagttaggcccaaccatgatttttaagatgatatcagag-catcttcaa 179  Q
    ||||||||||||| || ||||| | || ||| || || |||||||||||||| ||||||||||||||  |||| | ||||| ||| |||| | ||| |      
T  48417592 gtgtttataagtgagagcaatcttgacctcacaaaccagttttgtggggttgtgttaggcccaaccacaatttcttagatggtattagagccttctcctt 48417493  T
Q  180 gatctattgggccacctgctatc 202  Q
    |||| ||||||||||||||||||    
T  48417492 gatccattgggccacctgctatc 48417470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #71
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 79 - 147
Target Start/End: Original strand, 1596832 - 1596901
Alignment:
Q  79 aatgtgtttataagtgggaacaatcctcacttcataa-ccggttttgtggggttgagttaggcccaacca 147  Q
    ||||| ||||||||||||  |||||||||| | | || |||||||||| |||||| ||||||||||||||    
T  1596832 aatgtttttataagtgggggcaatcctcaccttacaagccggttttgtagggttgtgttaggcccaacca 1596901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #72
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 73 - 160
Target Start/End: Original strand, 4268052 - 4268141
Alignment:
Q  73 cctgataatgtgtttataagtgggaacaatcctcacttcataa-ccggttttgt-ggggttgagttaggcccaaccatgatttttaagat 160  Q
    ||||| ||| ||||||||||||||  ||||| |||| ||| || |||||||| | ||||||| |||||||||||||| ||||| ||||||    
T  4268052 cctgacaatttgtttataagtgggggcaatcatcacctcaaaagccggtttttttggggttgtgttaggcccaaccaagatttctaagat 4268141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #73
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 74 - 159
Target Start/End: Original strand, 5522878 - 5522966
Alignment:
Q  74 ctgataatgtgtttataagtgggaacaatcctcacttcataa-ccggt--tttgtggggttgagttaggcccaaccatgatttttaaga 159  Q
    |||| ||||||||| ||||||||| ||||| |||| ||| || |||||  |||||| ||||| |||| ||||||||| |||||||||||    
T  5522878 ctgacaatgtgtttttaagtgggagcaatcttcacctcacaagccggtattttgtgaggttgtgttacgcccaaccacgatttttaaga 5522966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #74
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 134 - 203
Target Start/End: Complemental strand, 9689124 - 9689055
Alignment:
Q  134 gttaggcccaaccatgatttttaagatgatatcagagcatcttcaagatctattgggccacctgctatca 203  Q
    ||||||||||||||  |||| | | ||| ||||||||| ||| ||||||| ||||| |||||||||||||    
T  9689124 gttaggcccaaccacaatttctgatatggtatcagagcctctccaagatccattggaccacctgctatca 9689055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #75
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 73 - 153
Target Start/End: Original strand, 40746496 - 40746577
Alignment:
Q  73 cctgataatgtgtttataagtgggaacaatcctcacttcataa-ccggttttgtggggttgagttaggcccaaccatgattt 153  Q
    ||||| ||| ||||||||||||||   ||||| ||| ||| || || |||||||| ||||| ||||||||||||||||||||    
T  40746496 cctgacaatttgtttataagtgggggaaatccacacctcacaagccagttttgtgaggttgtgttaggcccaaccatgattt 40746577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #76
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 74 - 157
Target Start/End: Original strand, 2401359 - 2401443
Alignment:
Q  74 ctgataatgtgtttataagtgggaacaatcctcacttcataa-ccggttttgtggggttgagttaggcccaaccatgatttttaa 157  Q
    |||| |||||||||||||||| | |||||| |||||||| ||  || ||||||| | ||| ||||||| |||||| |||||||||    
T  2401359 ctgacaatgtgtttataagtgtggacaatcttcacttcacaagtcgattttgtgagattgtgttaggctcaaccacgatttttaa 2401443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #77
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 74 - 157
Target Start/End: Complemental strand, 2544300 - 2544216
Alignment:
Q  74 ctgataatgtgtttataagtgggaacaatcctcacttcataa-ccggttttgtggggttgagttaggcccaaccatgatttttaa 157  Q
    |||| ||| ||||||||||||||  ||||| |||| | | || || |||||||||||||| ||||||||| |||| |||||||||    
T  2544300 ctgacaatttgtttataagtgggggcaatcttcaccttacaagccagttttgtggggttgtgttaggccctaccacgatttttaa 2544216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 80; Significance: 1e-37; HSPs: 76)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 73 - 223
Target Start/End: Original strand, 26176906 - 26177057
Alignment:
Q  73 cctgataatgtgtttataagtgggaacaatcctcacttcataa-ccggttttgtggggttgagttaggcccaaccatgatttttaagatgatatcagagc 171  Q
    ||||| |||||| ||||||||| |  |||||||||| ||| || ||||||||||||||||| |||||||||||||  ||||| |||||||||||||||||    
T  26176906 cctgacaatgtgcttataagtgagggcaatcctcacctcaaaaaccggttttgtggggttgtgttaggcccaaccgcgatttctaagatgatatcagagc 26177005  T
Q  172 atcttcaagatctattgggccacctgctatcaaatttctgctatcggaccac 223  Q
     ||| ||||||| ||||||||||||||||||| ||||| |||||||||||||    
T  26177006 ctctccaagatccattgggccacctgctatcagatttccgctatcggaccac 26177057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 69 - 223
Target Start/End: Complemental strand, 25145810 - 25145655
Alignment:
Q  69 atgacctgataatgtgtttataagtgggaacaatcctcacttcataa-ccggttttgtggggttgagttaggcccaaccatgatttttaagatgatatca 167  Q
    ||||||||| ||||| ||||| ||||||  |||||||||| ||| || |||| |||||||||||| |||||||||||||||||||| |||||||||||||    
T  25145810 atgacctgacaatgtatttattagtgggggcaatcctcacctcacaagccggatttgtggggttgtgttaggcccaaccatgatttctaagatgatatca 25145711  T
Q  168 gagcatcttcaagatctattgggccacctgctatcaaatttctgctatcggaccac 223  Q
    |||| ||| ||||||||||||  |||||||||||||  |||| | |||||||||||    
T  25145710 gagcctctccaagatctattgacccacctgctatcaggtttccgttatcggaccac 25145655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 73 - 223
Target Start/End: Complemental strand, 4113092 - 4112941
Alignment:
Q  73 cctgataatgtgtttataagtgggaacaatcctcacttcataa-ccggttttgtggggttgagttaggcccaaccatgatttttaagatgatatcagagc 171  Q
    ||||| ||||||||||||||||||  |||||||||| ||| || ||||||||||||||||| |||||||||||||| ||||| ||||||| |||| ||||    
T  4113092 cctgacaatgtgtttataagtgggggcaatcctcacctcacaagccggttttgtggggttgtgttaggcccaaccacgatttctaagatggtatcggagc 4112993  T
Q  172 atcttcaagatctattgggccacctgctatcaaatttctgctatcggaccac 223  Q
     ||| ||||||| |||| ||||||  ||||||  |||| ||||| |||||||    
T  4112992 ctctccaagatccattgagccaccatctatcaggtttccgctattggaccac 4112941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 73 - 223
Target Start/End: Original strand, 16162931 - 16163082
Alignment:
Q  73 cctgataatgtgtttataagtgggaacaatcctcacttcataa-ccggttttgtggggttgagttaggcccaaccatgatttttaagatgatatcagagc 171  Q
    ||||| ||||||||| |||||||| |||| |||||| |||||| ||| ||||||||||||| ||||| | ||||||  |||||||||||||||||| |||    
T  16162931 cctgacaatgtgtttttaagtggggacaaacctcacctcataaaccgattttgtggggttgtgttagactcaaccacaatttttaagatgatatcaaagc 16163030  T
Q  172 atcttcaagatctattgggccacctgctatcaaatttctgctatcggaccac 223  Q
     ||| ||||||| | |||||||||||||||||  |||| |||||||| ||||    
T  16163031 ctctccaagatccaatgggccacctgctatcaggtttccgctatcgggccac 16163082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 119 - 218
Target Start/End: Complemental strand, 51460481 - 51460382
Alignment:
Q  119 gttttgtggggttgagttaggcccaaccatgatttttaagatgatatcagagcatcttcaagatctattgggccacctgctatcaaatttctgctatcgg 218  Q
    |||||||||||||| ||||||||||||||| |||| ||| ||||||||||||| ||| ||||||| |||||||||||||||||||  |||| ||||||||    
T  51460481 gttttgtggggttgtgttaggcccaaccataatttctaaaatgatatcagagcctctccaagatccattgggccacctgctatcaggtttccgctatcgg 51460382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 74 - 223
Target Start/End: Complemental strand, 2859712 - 2859562
Alignment:
Q  74 ctgataatgtgtttataagtgggaacaatcctcacttcataa-ccggttttgtggggttgagttaggcccaaccatgatttttaagatgatatcagagca 172  Q
    |||| ||||||||||| ||||||   ||||||||| ||| || ||||||||||| ||||| ||||| ||||||||| |||| ||||||| ||| |||||     
T  2859712 ctgacaatgtgtttattagtgggggtaatcctcacctcacaagccggttttgtgaggttgtgttagccccaaccatcatttctaagatggtattagagcc 2859613  T
Q  173 tcttcaagatctattgggccacctgctatcaaatttctgctatcggaccac 223  Q
    ||||||||||| |||||||||||| |||| |  ||||||||||||| ||||    
T  2859612 tcttcaagatccattgggccaccttctattaggtttctgctatcgggccac 2859562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 75 - 223
Target Start/End: Complemental strand, 4098486 - 4098338
Alignment:
Q  75 tgataatgtgtttataagtgggaacaatcctcacttcataacc-ggttttgtggggttgagttaggcccaaccatgatttttaagatgatatcagagcat 173  Q
    ||||||||||||||||||||||  |||||||||| | | ||   ||||||||||| ||| |||||||||||||| ||||| |||| || ||||||||  |    
T  4098486 tgataatgtgtttataagtgggggcaatcctcaccttacaagttggttttgtggg-ttgtgttaggcccaaccacgatttctaagttggtatcagagact 4098388  T
Q  174 cttcaagatctattgggccacctgctatcaaatttctgctatcggaccac 223  Q
    |||||||||| |||||||||||||| ||||  ||||||||||||| ||||    
T  4098387 cttcaagatccattgggccacctgcaatcaggtttctgctatcgggccac 4098338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 79 - 223
Target Start/End: Original strand, 27413351 - 27413496
Alignment:
Q  79 aatgtgtttataagtgggaacaatcctcacttcataa-ccggttttgtggggttgagttaggcccaaccatgatttttaagatgatatcagagcatcttc 177  Q
    ||||||| ||||| |||  ||||||||||| ||| || ||| ||||||| ||||| |||||| ||||||| ||||| ||||||||||||||||| ||| |    
T  27413351 aatgtgtgtataactggagacaatcctcacctcacaagccgattttgtgaggttgtgttaggtccaaccacgatttctaagatgatatcagagcctctcc 27413450  T
Q  178 aagatctattgggccacctgctatcaaatttctgctatcggaccac 223  Q
    |||||||||| | ||||||| ||||| ||||| |||||||| ||||    
T  27413451 aagatctattagaccacctgttatcagatttccgctatcgggccac 27413496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 116 - 223
Target Start/End: Original strand, 35772071 - 35772178
Alignment:
Q  116 ccggttttgtggggttgagttaggcccaaccatgatttttaagatgatatcagagcatcttcaagatctattgggccacctgctatcaaatttctgctat 215  Q
    ||||||||||||||||| |||||||||||||| ||||| ||||||| ||||||||| |  |||||||| ||||||||| |||||||||  |||| |||||    
T  35772071 ccggttttgtggggttgtgttaggcccaaccacgatttctaagatggtatcagagccttctcaagatccattgggccatctgctatcaggtttccgctat 35772170  T
Q  216 cggaccac 223  Q
    ||| ||||    
T  35772171 cgggccac 35772178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 82 - 223
Target Start/End: Complemental strand, 39348429 - 39348287
Alignment:
Q  82 gtgtttataagtgggaacaatcctcacttcataa-ccggttttgtggggttgagttaggcccaaccatgatttttaagatgatatcagagcat-cttcaa 179  Q
    |||||||||||||||  |||||||||| ||| || ||||||||||||||||| ||||||||||| || ||||| ||||||| ||||||||| | || |||    
T  39348429 gtgtttataagtgggggcaatcctcacctcacaaaccggttttgtggggttgtgttaggcccaa-cacgatttctaagatggtatcagagcctcctccaa 39348331  T
Q  180 gatctattgggccacctgctatcaaatttctgctatcggaccac 223  Q
    | || |||||||||||||||||||  ||||  ||||||||||||    
T  39348330 ggtccattgggccacctgctatcaggtttccactatcggaccac 39348287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 69 - 204
Target Start/End: Complemental strand, 8871000 - 8870864
Alignment:
Q  69 atgacctgataatgtgtttataagtgggaacaatcctcacttcataa-ccggttttgtggggttgagttaggcccaaccatgatttttaagatgatatca 167  Q
    |||| |||| ||||||||||||||| ||  |||| ||||| |||||| ||| ||||||||||||| |||||| |||||||  |||| ||||||| |||||    
T  8871000 atgatctgacaatgtgtttataagttggggcaattctcacctcataagccgtttttgtggggttgtgttaggtccaaccaccatttctaagatggtatca 8870901  T
Q  168 gagcatcttcaagatctattgggccacctgctatcaa 204  Q
    |||  ||| ||| ||| ||||||||||||||||||||    
T  8870900 gagtctctccaatatccattgggccacctgctatcaa 8870864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 69 - 159
Target Start/End: Original strand, 40079146 - 40079237
Alignment:
Q  69 atgacctgataatgtgtttataagtgggaacaatcctcacttcataa-ccggttttgtggggttgagttaggcccaaccatgatttttaaga 159  Q
    ||||||||| ||||||||||||||||||  |||||||||| ||| || ||||||||||||||||| |||||||||||||| ||||| |||||    
T  40079146 atgacctgacaatgtgtttataagtgggggcaatcctcacctcacaagccggttttgtggggttgtgttaggcccaaccacgatttctaaga 40079237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 74 - 221
Target Start/End: Complemental strand, 26173541 - 26173393
Alignment:
Q  74 ctgataatgtgtttataagtgggaacaatcctcacttcataa-ccggttttgtggggttgagttaggcccaaccatgatttttaagatgatatcagagca 172  Q
    |||| ||||||||||||||||||  |||| ||||| |  ||| ||||||||||||||||| |||||| |||||||   ||| ||| |||||||||||||     
T  26173541 ctgacaatgtgtttataagtgggggcaattctcaccttgtaagccggttttgtggggttgtgttaggtccaaccaccctttctaaaatgatatcagagcc 26173442  T
Q  173 tcttcaagatctattgggccacctgctatcaaatttctgctatcggacc 221  Q
    ||||| | ||| || || |||||||||||||  |||| |||||||||||    
T  26173441 tcttcgatatccatcggaccacctgctatcaggtttccgctatcggacc 26173393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 119 - 203
Target Start/End: Original strand, 30369880 - 30369964
Alignment:
Q  119 gttttgtggggttgagttaggcccaaccatgatttttaagatgatatcagagcatcttcaagatctattgggccacctgctatca 203  Q
    |||||||||||||| |||||||||||||| ||||| ||||||  ||||||||| ||| ||||||| |||||| ||||||||||||    
T  30369880 gttttgtggggttgtgttaggcccaaccacgatttctaagattgtatcagagcctctccaagatccattgggtcacctgctatca 30369964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 74 - 159
Target Start/End: Complemental strand, 20208611 - 20208527
Alignment:
Q  74 ctgataatgtgtttataagtgggaacaatcctcacttcataaccggttttgtggggttgagttaggcccaaccatgatttttaaga 159  Q
    |||| ||||||||||||||||||  |||||||||| ||||| |||| |||||||||||| |||||||||||||| ||||| |||||    
T  20208611 ctgacaatgtgtttataagtgggggcaatcctcacctcatagccgg-tttgtggggttgtgttaggcccaaccacgatttctaaga 20208527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 121 - 218
Target Start/End: Original strand, 35892103 - 35892200
Alignment:
Q  121 tttgtggggttgagttaggcccaaccatgatttttaagatgatatcagagcatcttcaagatctattgggccacctgctatcaaatttctgctatcgg 218  Q
    |||||||||||| |||| ||||| ||| ||||| ||||| | ||||||||  ||||||||||  |||||||||| |||||||| ||||||||||||||    
T  35892103 tttgtggggttgtgttaagcccatccacgatttctaagaaggtatcagagtctcttcaagattcattgggccacttgctatcatatttctgctatcgg 35892200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 73 - 196
Target Start/End: Complemental strand, 17452914 - 17452790
Alignment:
Q  73 cctgataatgtgtttataagtgggaacaatcctcacttcataa-ccggttttgtggggttgagttaggcccaaccatgatttttaagatgatatcagagc 171  Q
    ||||| ||||| ||||||||||||  ||||| |||| ||| || ||||||||||||||||| |||||||| ||||| ||||| ||||||| ||| |||||    
T  17452914 cctgacaatgtatttataagtgggggcaatcttcacctcacaagccggttttgtggggttgtgttaggcctaaccacgatttctaagatggtattagagc 17452815  T
Q  172 atcttcaagatctattgggccacct 196  Q
     |||  || ||| ||||||||||||    
T  17452814 ctctctaaaatccattgggccacct 17452790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 73 - 160
Target Start/End: Original strand, 35772262 - 35772350
Alignment:
Q  73 cctgataatgtgtttataagtgggaacaatcctcacttcataa-ccggttttgtggggttgagttaggcccaaccatgatttttaagat 160  Q
    ||||| ||||||||||||||||||  ||||||| || ||| || ||||||||||||||||| |||||||||||||| ||||| ||||||    
T  35772262 cctgacaatgtgtttataagtgggggcaatccttacctcagaagccggttttgtggggttgtgttaggcccaaccacgatttctaagat 35772350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 79 - 218
Target Start/End: Original strand, 38668129 - 38668269
Alignment:
Q  79 aatgtgtttataagtgggaacaatcctcacttcataa-ccggttttgtggggttgagttaggcccaaccatgatttttaagatgatatcagagcatcttc 177  Q
    ||||||||||||||||||  ||||| |||  ||| || ||  ||||||||||||| ||||||||||| ||  |||| ||||||| ||||||||| ||| |    
T  38668129 aatgtgtttataagtgggggcaatcatcatctcacaagccaattttgtggggttgtgttaggcccaatcacaatttctaagatggtatcagagcctctcc 38668228  T
Q  178 aagatctattgggccacctgctatcaaatttctgctatcgg 218  Q
    | |||| |||||| |||||| |||||  |||||||||||||    
T  38668229 atgatccattgggtcacctgttatcaggtttctgctatcgg 38668269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 69 - 159
Target Start/End: Original strand, 26177137 - 26177228
Alignment:
Q  69 atgacctgataatgtgtttataagtgggaacaatcctcacttcataa-ccggttttgtggggttgagttaggcccaaccatgatttttaaga 159  Q
    ||||||||| || |||||||||||||||  |||||||||| ||| || || |||||||||||||| |||||||||||||| ||||| |||||    
T  26177137 atgacctgacaacgtgtttataagtgggggcaatcctcacctcaaaaaccagttttgtggggttgtgttaggcccaaccacgatttctaaga 26177228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 74 - 196
Target Start/End: Original strand, 51589805 - 51589928
Alignment:
Q  74 ctgataatgtgtttataagtgggaacaatcctcacttcataa-ccggttttgtggggttgagttaggcccaaccatgatttttaagatgatatcagagca 172  Q
    |||| ||| |||||||||||| |  |||||||||| ||| || ||| ||||||||||||| |||||||||||||| ||||| ||| ||| |||||||||     
T  51589805 ctgacaatttgtttataagtgagggcaatcctcacctcacaagccgattttgtggggttgtgttaggcccaaccacgatttctaatatggtatcagagcc 51589904  T
Q  173 tcttcaagatctattgggccacct 196  Q
    |||||| |||   |||||||||||    
T  51589905 tcttcacgattctttgggccacct 51589928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 80 - 201
Target Start/End: Complemental strand, 26347047 - 26346926
Alignment:
Q  80 atgtgtttataagtgggaacaatcctcacttcataa-ccggttttgtggggttgagttaggcccaaccatgatttttaagatgatatcagagcatcttca 178  Q
    ||||||||||||||||  ||||||||||| ||| || || |||||||||||||| ||||| | || ||| ||||| ||||||||||||||||| || |||    
T  26347047 atgtgtttataagtggagacaatcctcacctcacaagcccgttttgtggggttgtgttagcctca-ccacgatttctaagatgatatcagagcctcctca 26346949  T
Q  179 agatctattgggccacctgctat 201  Q
    | |||  |||| |||||||||||    
T  26346948 aaatccgttggaccacctgctat 26346926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 74 - 203
Target Start/End: Original strand, 51588991 - 51589121
Alignment:
Q  74 ctgataatgtgtttataagtgggaacaatcctcacttcataa-ccggttttgtggggttgagttaggcccaaccatgatttttaagatgatatcagagca 172  Q
    |||| ||| |||||||||||| |  |||||||||| ||| || ||||||||||||||||| ||||||||||||||  |||| ||| ||| ||||| |||     
T  51588991 ctgacaatttgtttataagtgagggcaatcctcacctcacaagccggttttgtggggttgtgttaggcccaaccaccatttctaatatggtatcaaagcc 51589090  T
Q  173 tcttcaagatctattgggccacctgctatca 203  Q
    |||||| |||   |||||||||||| |||||    
T  51589091 tcttcacgattctttgggccacctgttatca 51589121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 74 - 170
Target Start/End: Original strand, 3169765 - 3169862
Alignment:
Q  74 ctgataatgtgtttataagtgggaacaatcctcacttcataa-ccggttttgtggggttgagttaggcccaaccatgatttttaagatgatatcagag 170  Q
    |||| ||| ||||||||||||||  ||||| |||| ||| || ||||||||||||||||| |||||||||||||| ||||| ||| ||| ||||||||    
T  3169765 ctgacaatttgtttataagtgggggcaatcttcacctcacaagccggttttgtggggttgtgttaggcccaaccacgatttctaatatggtatcagag 3169862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 73 - 153
Target Start/End: Complemental strand, 17452765 - 17452684
Alignment:
Q  73 cctgataatgtgtttataagtgggaacaatcctcacttcataa-ccggttttgtggggttgagttaggcccaaccatgattt 153  Q
    ||||| ||||| ||||||||||||  |||||||||| ||| || ||||||||||||||||| |||||||||||||| |||||    
T  17452765 cctgacaatgtatttataagtgggggcaatcctcacctcacaagccggttttgtggggttgtgttaggcccaaccacgattt 17452684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 114 - 218
Target Start/End: Original strand, 33156773 - 33156878
Alignment:
Q  114 aaccggttttgtggggttgagttaggcccaaccatgatttttaagatgatatcagagcat-cttcaagatctattgggccacctgctatcaaatttctgc 212  Q
    ||||||||||||||||||| |||||||||||||| ||||| ||||||| ||| ||||| | || |||||||  ||||  ||||||||||||  |||| ||    
T  33156773 aaccggttttgtggggttgtgttaggcccaaccacgatttctaagatggtattagagcctactccaagatccgttggttcacctgctatcaggtttccgc 33156872  T
Q  213 tatcgg 218  Q
    ||||||    
T  33156873 tatcgg 33156878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 74 - 147
Target Start/End: Original strand, 39808465 - 39808538
Alignment:
Q  74 ctgataatgtgtttataagtgggaacaatcctcacttcataaccggttttgtggggttgagttaggcccaacca 147  Q
    |||| |||||||||||||||||| |||||||||||  |  |||||||||||||||| || ||||||||||||||    
T  39808465 ctgacaatgtgtttataagtggggacaatcctcacccccaaaccggttttgtggggctgtgttaggcccaacca 39808538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 79 - 159
Target Start/End: Complemental strand, 52650851 - 52650770
Alignment:
Q  79 aatgtgtttataagtgggaacaatcctcacttcataacc-ggttttgtggggttgagttaggcccaaccatgatttttaaga 159  Q
    ||||||||||||||||||  |||||||||| ||| || | ||||||||||||||| ||||||||||||||| |||| |||||    
T  52650851 aatgtgtttataagtgggggcaatcctcacctcacaagctggttttgtggggttgtgttaggcccaaccataatttctaaga 52650770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 118 - 198
Target Start/End: Original strand, 17402626 - 17402706
Alignment:
Q  118 ggttttgtggggttgagttaggcccaaccatgatttttaagatgatatcagagcatcttcaagatctattgggccacctgc 198  Q
    ||||| || |||||| ||||||||| |||| ||||||||||||| ||||||||||||| ||||||| ||||| | ||||||    
T  17402626 ggtttcgtagggttgtgttaggcccgaccacgatttttaagatggtatcagagcatctccaagatccattggactacctgc 17402706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 74 - 216
Target Start/End: Original strand, 38733151 - 38733293
Alignment:
Q  74 ctgataatgtgtttataagtgggaacaatcctcacttcataac-cggttttgtggggttgagttaggcccaaccatgatttttaagatgatatcagagca 172  Q
    |||| ||||||||||||||||||| |||| ||||  ||| ||  |||||||||| | ||| ||||||  |||||| ||||| ||||||| ||||||||      
T  38733151 ctgacaatgtgtttataagtggga-caattctcatctcacaagtcggttttgtgagattgtgttaggttcaaccacgatttctaagatggtatcagagtc 38733249  T
Q  173 tcttcaagatctattgggccacctgctatcaaatttctgctatc 216  Q
    ||| ||||||| ||||| |||||||||||||  |||| ||||||    
T  38733250 tctccaagatccattggaccacctgctatcaggtttccgctatc 38733293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 118 - 172
Target Start/End: Original strand, 29265997 - 29266051
Alignment:
Q  118 ggttttgtggggttgagttaggcccaaccatgatttttaagatgatatcagagca 172  Q
    ||||||||||||||| |||||||||||||| ||||| ||||||| ||||||||||    
T  29265997 ggttttgtggggttgtgttaggcccaaccacgatttctaagatggtatcagagca 29266051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 125 - 203
Target Start/End: Complemental strand, 51460083 - 51460005
Alignment:
Q  125 tggggttgagttaggcccaaccatgatttttaagatgatatcagagcatcttcaagatctattgggccacctgctatca 203  Q
    |||||||| ||||||||||||||  |||| ||||||| ||| || || ||| ||||||| |||||||||||||||||||    
T  51460083 tggggttgtgttaggcccaaccacaatttctaagatggtattagcgcctctccaagatccattgggccacctgctatca 51460005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 74 - 171
Target Start/End: Original strand, 51589225 - 51589323
Alignment:
Q  74 ctgataatgtgtttataagtgggaacaatcctcacttcataa-ccggttttgtggggttgagttaggcccaaccatgatttttaagatgatatcagagc 171  Q
    |||| ||| |||||||||||| |  |||||||||| ||| || ||||||||||||||||| |||||||| ||||| ||||| ||| ||| |||||||||    
T  51589225 ctgacaatttgtttataagtgagggcaatcctcacctcacaagccggttttgtggggttgtgttaggcctaaccacgatttctaatatggtatcagagc 51589323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 153 - 223
Target Start/End: Original strand, 52961426 - 52961496
Alignment:
Q  153 tttaagatgatatcagagcatcttcaagatctattgggccacctgctatcaaatttctgctatcggaccac 223  Q
    |||||| || ||||||||| ||||||||||| |||||||||||||||||||  |||| |||||||| ||||    
T  52961426 tttaagttggtatcagagcctcttcaagatccattgggccacctgctatcaggtttccgctatcgggccac 52961496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 74 - 179
Target Start/End: Original strand, 9499245 - 9499350
Alignment:
Q  74 ctgataatgtgtttataagtgggaacaatcctcacttcataaccggttttgtggggttgagttaggcccaaccatgatttttaagatgatatcagagcat 173  Q
    |||| ||| ||||||||||| ||  ||||| |||| ||| ||||||||||||||||||| ||| | | |||||| ||||| ||| ||||||||||||  |    
T  9499245 ctgacaatatgtttataagtaggggcaatcttcacctcacaaccggttttgtggggttgtgttcgactcaaccacgatttctaaaatgatatcagagtct 9499344  T
Q  174 cttcaa 179  Q
    ||||||    
T  9499345 cttcaa 9499350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 116 - 185
Target Start/End: Original strand, 25255353 - 25255421
Alignment:
Q  116 ccggttttgtggggttgagttaggcccaaccatgatttttaagatgatatcagagcatcttcaagatcta 185  Q
    ||||||||||||||||| |||||||||||||| ||||| ||||||| ||||||| | ||||||| |||||    
T  25255353 ccggttttgtggggttgtgttaggcccaaccacgatttctaagatg-tatcagatcctcttcaatatcta 25255421  T

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Target: chr1; HSP #37
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 74 - 170
Target Start/End: Original strand, 35892290 - 35892387
Alignment:
Q  74 ctgataatgtgtttataagtgggaacaatcctcacttcataacc-ggttttgtggggttgagttaggcccaaccatgatttttaagatgatatcagag 170  Q
    |||| ||||| ||||||||||||  |||| ||||| ||| |||| ||||||||||||||  ||||||| ||||||| |||| ||||||| ||||||||    
T  35892290 ctgacaatgtatttataagtgggggcaatactcacctcacaacccggttttgtggggttctgttaggctcaaccataatttctaagatggtatcagag 35892387  T

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Target: chr1; HSP #38
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 142 - 182
Target Start/End: Complemental strand, 12489211 - 12489171
Alignment:
Q  142 caaccatgatttttaagatgatatcagagcatcttcaagat 182  Q
    |||||||||||||||||||| ||||||||||||||||||||    
T  12489211 caaccatgatttttaagatggtatcagagcatcttcaagat 12489171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 80 - 171
Target Start/End: Complemental strand, 40316129 - 40316037
Alignment:
Q  80 atgtgtttataagtgggaacaatcctcacttcataa-ccggttttgtggggttgagttaggcccaaccatgatttttaagatgatatcagagc 171  Q
    |||||||||||||||||  |||||||||| |||||| ||||||||||| ||||| |||||  ||||||| ||||| ||| ||| ||| |||||    
T  40316129 atgtgtttataagtggggtcaatcctcacctcataagccggttttgtgaggttgtgttagatccaaccacgatttctaacatggtattagagc 40316037  T

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Target: chr1; HSP #40
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 74 - 153
Target Start/End: Original strand, 52961581 - 52961661
Alignment:
Q  74 ctgataatgtgtttataagtgggaacaatcctcacttcataa-ccggttttgtggggttgagttaggcccaaccatgattt 153  Q
    |||| |||||||||||||||| |  |||||||||| ||| || |||||||| |||||||| |||||| |||||||||||||    
T  52961581 ctgacaatgtgtttataagtgagggcaatcctcacctcaaaagccggttttatggggttgtgttaggtccaaccatgattt 52961661  T

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Target: chr1; HSP #41
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 69 - 223
Target Start/End: Original strand, 7307715 - 7307870
Alignment:
Q  69 atgacctgataatgtgtttataagtgggaacaatcctcacttcataac-cggttttgtggggttgagttaggcccaaccatgatttttaagatgatatca 167  Q
    ||||||| | |||||||||||||||||   |||| ||||| ||| ||  ||||||||| || ||  |||||||| |||||| |||| |||||||||||||    
T  7307715 atgacctaacaatgtgtttataagtggaggcaattctcacctcacaagtcggttttgttggattatgttaggcctaaccataatttctaagatgatatca 7307814  T
Q  168 gagcatcttcaagatctattgggccacctgctatcaaatttctgctatcggaccac 223  Q
     ||   |||||||||| |||||| |  |||||||||  |||| ||||| |||||||    
T  7307815 tagtcacttcaagatccattgggtcgtctgctatcaggtttccgctattggaccac 7307870  T

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Target: chr1; HSP #42
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 82 - 195
Target Start/End: Original strand, 11234223 - 11234338
Alignment:
Q  82 gtgtttataagtgggaacaatcctcacttcataa-ccggttttgtggggttgagttaggcccaaccatgatttttaagatgatatcagagcat-cttcaa 179  Q
    ||||||||||||||| ||| | ||||| |||||| |||||||||||||||||  |||||||||||||  | || ||||||| ||| ||||| | || |||    
T  11234223 gtgtttataagtggggacagttctcacctcataagccggttttgtggggttgtattaggcccaaccacaaattataagatggtattagagcctcctccaa 11234322  T
Q  180 gatctattgggccacc 195  Q
    ||||  ||||||||||    
T  11234323 gatccgttgggccacc 11234338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 73 - 147
Target Start/End: Complemental strand, 25137389 - 25137314
Alignment:
Q  73 cctgataatgtgtttataagtgggaacaatcctcacttcataa-ccggttttgtggggttgagttaggcccaacca 147  Q
    ||||| ||| |||||||||||  |  |||||||||| |||||| ||||||||||||||||| ||||||||||||||    
T  25137389 cctgacaatttgtttataagtatgggcaatcctcacctcataagccggttttgtggggttgtgttaggcccaacca 25137314  T

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Target: chr1; HSP #44
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 164 - 223
Target Start/End: Original strand, 25713248 - 25713307
Alignment:
Q  164 atcagagcatcttcaagatctattgggccacctgctatcaaatttctgctatcggaccac 223  Q
    |||||||| ||| ||||||| |||||||||||||||||||| |||| |||||||| ||||    
T  25713248 atcagagcctctccaagatccattgggccacctgctatcaagtttccgctatcgggccac 25713307  T

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Target: chr1; HSP #45
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 141 - 216
Target Start/End: Complemental strand, 32783298 - 32783223
Alignment:
Q  141 ccaaccatgatttttaagatgatatcagagcatcttcaagatctattgggccacctgctatcaaatttctgctatc 216  Q
    ||||||| ||||| ||||||| ||||||||  ||||||||||| ||||  |||||||||||||  |||||||||||    
T  32783298 ccaaccacgatttctaagatggtatcagagtctcttcaagatccattgtaccacctgctatcaggtttctgctatc 32783223  T

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Target: chr1; HSP #46
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 73 - 182
Target Start/End: Complemental strand, 3477262 - 3477152
Alignment:
Q  73 cctgataatgtgtttataagtgggaacaatcctcacttcataa-ccggttttgtggggttgagttaggcccaaccatgatttttaagatgatatcagagc 171  Q
    ||||||||||||||||||||||||  | ||||| || |||||| ||| || ||||||||||  |||||| ||| || ||||| |||||||| || ||||     
T  3477262 cctgataatgtgtttataagtgggggcgatccttacctcataacccgattgtgtggggttgtattaggcacaatcacgatttctaagatgacataagagt 3477163  T
Q  172 atcttcaagat 182  Q
     ||||||||||    
T  3477162 ctcttcaagat 3477152  T

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Target: chr1; HSP #47
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 80 - 160
Target Start/End: Complemental strand, 4098242 - 4098161
Alignment:
Q  80 atgtgtttataagtgggaacaatcctcacttcataa-ccggttttgtggggttgagttaggcccaaccatgatttttaagat 160  Q
    |||||||||||||||||  |||||||| ||||| || ||||||||||| | ||| ||||||||||||||  |||| ||||||    
T  4098242 atgtgtttataagtgggggcaatcctctcttcacaaaccggttttgtgtgattgtgttaggcccaaccacaatttctaagat 4098161  T

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Target: chr1; HSP #48
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 150 - 223
Target Start/End: Complemental strand, 4112783 - 4112710
Alignment:
Q  150 atttttaagatgatatcagagcatcttcaagatctattgggccacctgctatcaaatttctgctatcggaccac 223  Q
    |||| ||||||| ||||||||| ||| ||||||| ||||| |||||||||||||  |||| ||||||| |||||    
T  4112783 atttctaagatggtatcagagcctctccaagatccattggaccacctgctatcaggtttccgctatcgaaccac 4112710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 100 - 203
Target Start/End: Complemental strand, 12376732 - 12376627
Alignment:
Q  100 aatcctcacttcataa-ccggttttgtggggttgagttaggcccaaccatgatttttaagatgatatcagagcat-cttcaagatctattgggccacctg 197  Q
    ||||||||| ||| || ||| |||| ||||||||||||||| ||||| | ||||| |||| || ||| ||||||| | | |||||| |||||||||||||    
T  12376732 aatcctcacctcacaagccgtttttatggggttgagttaggtccaacgacgatttctaagttggtattagagcatccgttaagatccattgggccacctg 12376633  T
Q  198 ctatca 203  Q
    ||||||    
T  12376632 ctatca 12376627  T

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Target: chr1; HSP #50
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 84 - 160
Target Start/End: Original strand, 33157230 - 33157307
Alignment:
Q  84 gtttataagtgggaacaatcctcacttcataac-cggttttgtggggttgagttaggcccaaccatgatttttaagat 160  Q
    ||||||||||||| ||||||| ||| || |||  |||||||||||||||| ||||||||||| || ||||| ||||||    
T  33157230 gtttataagtggggacaatccccacctcgtaagtcggttttgtggggttgtgttaggcccaatcacgatttctaagat 33157307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 80 - 147
Target Start/End: Complemental strand, 31181592 - 31181524
Alignment:
Q  80 atgtgtttataagtgggaacaatcctcacttcataacc-ggttttgtggggttgagttaggcccaacca 147  Q
    |||||||||||||||||  |||||||||| ||| || | |||||| |||||||| ||||||||||||||    
T  31181592 atgtgtttataagtgggggcaatcctcacctcacaagctggttttatggggttgtgttaggcccaacca 31181524  T

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Target: chr1; HSP #52
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 99 - 162
Target Start/End: Complemental strand, 31432290 - 31432226
Alignment:
Q  99 caatcctcacttcataa-ccggttttgtggggttgagttaggcccaaccatgatttttaagatga 162  Q
    |||||||||| ||| || ||||||||||||||||| | |||||||||||| ||||| ||||||||    
T  31432290 caatcctcacctcacaagccggttttgtggggttgtgctaggcccaaccacgatttctaagatga 31432226  T

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Target: chr1; HSP #53
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 73 - 147
Target Start/End: Complemental strand, 2859478 - 2859403
Alignment:
Q  73 cctgataatgtgtttataagtgggaacaatcctcacttcataa-ccggttttgtggggttgagttaggcccaacca 147  Q
    ||||| ||||||||||||||||||  ||||||| || ||| || |||||| |||| ||||| ||||||||||||||    
T  2859478 cctgacaatgtgtttataagtgggggcaatccttacctcacaagccggttctgtgaggttgtgttaggcccaacca 2859403  T

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Target: chr1; HSP #54
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 114 - 157
Target Start/End: Original strand, 11924961 - 11925004
Alignment:
Q  114 aaccggttttgtggggttgagttaggcccaaccatgatttttaa 157  Q
    ||||||||||||| ||||| |||||||||||||| |||||||||    
T  11924961 aaccggttttgtgaggttgtgttaggcccaaccacgatttttaa 11925004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 83 - 145
Target Start/End: Complemental strand, 12245038 - 12244975
Alignment:
Q  83 tgtttataagtgggaacaatcctcacttcataa-ccggttttgtggggttgagttaggcccaac 145  Q
    ||||||||||||||  |||||||||| ||| || ||||||||||||||||| |||||| |||||    
T  12245038 tgtttataagtgggggcaatcctcacctcacaagccggttttgtggggttgtgttaggtccaac 12244975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 73 - 147
Target Start/End: Complemental strand, 15986419 - 15986344
Alignment:
Q  73 cctgataatgtgtttataagtgggaacaatcctcacttcataa-ccggttttgtggggttgagttaggcccaacca 147  Q
    ||||| ||||||||||||||||||  |||||||||| ||| || | ||| ||||||||||| |||||| |||||||    
T  15986419 cctgacaatgtgtttataagtgggggcaatcctcacctcacaagctggtattgtggggttgtgttaggtccaacca 15986344  T

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Target: chr1; HSP #57
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 73 - 147
Target Start/End: Complemental strand, 21626425 - 21626350
Alignment:
Q  73 cctgataatgtgtttataagtgggaacaatcctcacttcataa-ccggttttgtggggttgagttaggcccaacca 147  Q
    ||||| ||| ||||||||||||||  | |||||||||||| || |||||||||||||| ||  |||||||||||||    
T  21626425 cctgacaatatgtttataagtgggggccatcctcacttcaaaatccggttttgtggggctgttttaggcccaacca 21626350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 74 - 160
Target Start/End: Complemental strand, 25145570 - 25145483
Alignment:
Q  74 ctgataatgtgtttataagtgggaacaatcctcacttcataa-ccggttttgtggggttgagttaggcccaaccatgatttttaagat 160  Q
    |||| ||||||||||| ||||||  |||||||||| ||| ||  |||||||||| ||||| ||||| |||||||| ||||| ||||||    
T  25145570 ctgacaatgtgtttattagtgggggcaatcctcacctcacaagtcggttttgtgaggttgtgttagacccaaccacgatttctaagat 25145483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 69 - 147
Target Start/End: Complemental strand, 26865448 - 26865369
Alignment:
Q  69 atgacctgataatgtgtttataagtgggaacaatcctcacttcataa-ccggttttgtggggttgagttaggcccaacca 147  Q
    ||||||||| ||||| ||||||||||||  |||||| ||| ||| || |||||||||||||||||  |||||| ||||||    
T  26865448 atgacctgacaatgtatttataagtgggggcaatccccacctcacaagccggttttgtggggttgtattaggctcaacca 26865369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 116 - 223
Target Start/End: Complemental strand, 31496413 - 31496306
Alignment:
Q  116 ccggttttgtggggttgagttaggcccaaccatgatttttaagatgatatcagagcatcttcaagatctattgggccacctgctatcaaatttctgctat 215  Q
    |||||||| |||||||| ||||| | ||| || ||||| ||||||  ||| ||||  |||| |||||| ||||| |||||||||||||  || | |||||    
T  31496413 ccggttttatggggttgtgttagactcaatcacgatttctaagatagtattagagtctctttaagatccattggaccacctgctatcaggttcccgctat 31496314  T
Q  216 cggaccac 223  Q
    ||||||||    
T  31496313 cggaccac 31496306  T

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Target: chr1; HSP #61
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 73 - 147
Target Start/End: Original strand, 38080603 - 38080677
Alignment:
Q  73 cctgataatgtgtttataagtgggaacaatcctcacttcataa-ccggttttgtggggttgagttaggcccaacca 147  Q
    ||||| ||||||||||||| ||||  |||||||||| ||| || || |||||||||||||| ||||||||||||||    
T  38080603 cctgacaatgtgtttataattgggg-caatcctcacctcacaagccagttttgtggggttgtgttaggcccaacca 38080677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 73 - 159
Target Start/End: Complemental strand, 42586524 - 42586438
Alignment:
Q  73 cctgataatgtgtttataagtgggaacaatcctcacttcataa-ccggttttgtggggttgagttaggcccaaccatgatttttaaga 159  Q
    ||||| ||||||| ||||||||||  |||||||||| ||| || ||  ||||||||||||| |||||||||||||| ||||| |||||    
T  42586524 cctgacaatgtgtatataagtgggg-caatcctcacctcacaagccaattttgtggggttgtgttaggcccaaccacgatttctaaga 42586438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 85 - 171
Target Start/End: Original strand, 50882674 - 50882761
Alignment:
Q  85 tttataagtgggaacaatcctcacttcataac-cggttttgtggggttgagttaggcccaaccatgatttttaagatgatatcagagc 171  Q
    |||||||||| ||||||||||||  ||| ||  ||||||||||| ||||  || |||||||||| ||||||||||||| ||| |||||    
T  50882674 tttataagtgagaacaatcctcatctcacaagtcggttttgtggagttgtattcggcccaaccaagatttttaagatggtataagagc 50882761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 69 - 159
Target Start/End: Original strand, 16163161 - 16163254
Alignment:
Q  69 atgacctgataatgtgtttataagtgggaacaatcctcacttcataa-ccggttttgtggggt--tgagttaggcccaaccatgatttttaaga 159  Q
    ||||| ||| ||||||||||||||||||  ||||| |||| ||| || |||||||||||||||  |  ||||||||||||||  ||||||||||    
T  16163161 atgacttgacaatgtgtttataagtgggggcaatcttcacctcacaatccggttttgtggggttatatgttaggcccaaccacaatttttaaga 16163254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 74 - 159
Target Start/End: Original strand, 38733381 - 38733467
Alignment:
Q  74 ctgataatgtgtttataagtgggaacaatcctcacttcataa-ccggttttgtggggttgagttaggcccaaccatgatttttaaga 159  Q
    |||| ||| |||||||||||| |  |||||||||| |||||  ||||||||||| ||||| |||||||||||| | ||||| |||||    
T  38733381 ctgacaatatgtttataagtgagggcaatcctcacctcataggccggttttgtgaggttgtgttaggcccaacaacgatttctaaga 38733467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 73 - 145
Target Start/End: Original strand, 855979 - 856052
Alignment:
Q  73 cctgataatgtgtttataagtgggaacaatcctcacttcataa-ccggttttgtggggttgagttaggcccaac 145  Q
    ||||| |||||||||||| ||||| ||||||||||| ||| || | ||||||||| | ||| ||||||||||||    
T  855979 cctgacaatgtgtttatacgtggggacaatcctcacctcacaagctggttttgtgagattgtgttaggcccaac 856052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 120 - 169
Target Start/End: Original strand, 2120123 - 2120172
Alignment:
Q  120 ttttgtggggttgagttaggcccaaccatgatttttaagatgatatcaga 169  Q
    ||||||||||||| |||||| |||| || ||||| |||||||||||||||    
T  2120123 ttttgtggggttgtgttaggtccaatcacgatttctaagatgatatcaga 2120172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 119 - 203
Target Start/End: Complemental strand, 12325599 - 12325514
Alignment:
Q  119 gttttgtggggttgagttaggcccaaccatgatttttaagatgatatcagagcat-cttcaagatctattgggccacctgctatca 203  Q
    ||||||||||||||||||||| ||||| |   ||| ||| ||| ||| ||||||| | | |||||| |||||||||||||||||||    
T  12325599 gttttgtggggttgagttaggtccaacgacagtttctaacatggtattagagcatccgttaagatccattgggccacctgctatca 12325514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 73 - 153
Target Start/End: Original strand, 17402712 - 17402793
Alignment:
Q  73 cctgataatgtgtttataagtgggaacaatcctcacttcataa-ccggttttgtggggttgagttaggcccaaccatgattt 153  Q
    ||||| ||| ||||||||||||||  |||||||||| ||| || |||||||| |||| ||| ||||| ||| ||||||||||    
T  17402712 cctgacaatttgtttataagtgggggcaatcctcacctcaaaatccggttttttgggattgcgttagacccgaccatgattt 17402793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 134 - 171
Target Start/End: Complemental strand, 23436599 - 23436562
Alignment:
Q  134 gttaggcccaaccatgatttttaagatgatatcagagc 171  Q
    |||| ||||||||| |||||||||||||||||||||||    
T  23436599 gttaagcccaaccacgatttttaagatgatatcagagc 23436562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 83 - 159
Target Start/End: Complemental strand, 41035903 - 41035826
Alignment:
Q  83 tgtttataagtgggaacaatcctcacttcataa-ccggttttgtggggttgagttaggcccaaccatgatttttaaga 159  Q
    ||||||||||||||  |||||||||| ||| || ||||||||||||| ||| |||||| ||||| | ||||| |||||    
T  41035903 tgtttataagtgggggcaatcctcacctcacaagccggttttgtgggattgtgttaggtccaactacgatttctaaga 41035826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 74 - 125
Target Start/End: Original strand, 17412335 - 17412387
Alignment:
Q  74 ctgataatgtgtttataagtgggaacaatcctcacttcat-aaccggttttgt 125  Q
    ||||||||||||||||||||||| ||||||| ||| || | ||||||||||||    
T  17412335 ctgataatgtgtttataagtggggacaatccgcacctcgtaaaccggttttgt 17412387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 69 - 97
Target Start/End: Original strand, 19484158 - 19484186
Alignment:
Q  69 atgacctgataatgtgtttataagtggga 97  Q
    |||||||||||||||||||||||||||||    
T  19484158 atgacctgataatgtgtttataagtggga 19484186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #74
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 80 - 147
Target Start/End: Complemental strand, 31004516 - 31004448
Alignment:
Q  80 atgtgtttataagtgggaacaatcctcacttcataa-ccggttttgtggggttgagttaggcccaacca 147  Q
    |||||||||||||||||  |||||||||| ||| || | |||||||| |||||| ||||| ||||||||    
T  31004516 atgtgtttataagtgggggcaatcctcacctcacaagctggttttgttgggttgcgttagacccaacca 31004448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #75
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 80 - 159
Target Start/End: Complemental strand, 42351939 - 42351859
Alignment:
Q  80 atgtgtttataagtgggaacaatcctcacttcataa-ccggttttgtggggttgagttaggcccaaccatgatttttaaga 159  Q
    ||||||||||||||||   | |||||||| ||| || || ||||||||| |||| ||| |||||||||||||||| |||||    
T  42351939 atgtgtttataagtggaggccatcctcacctcacaagccagttttgtggtgttgtgttgggcccaaccatgatttctaaga 42351859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #76
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 80 - 147
Target Start/End: Original strand, 52907389 - 52907457
Alignment:
Q  80 atgtgtttataagtgggaacaatcctcacttcataa-ccggttttgtggggttgagttaggcccaacca 147  Q
    |||||||||||||||||  |||||||||| ||| || | ||||||||||||||| || || ||||||||    
T  52907389 atgtgtttataagtgggggcaatcctcacctcacaagctggttttgtggggttgtgtaagacccaacca 52907457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 76; Significance: 3e-35; HSPs: 57)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 69 - 223
Target Start/End: Original strand, 2029763 - 2029918
Alignment:
Q  69 atgacctgataatgtgtttataagtgggaacaatcctcacttcataa-ccggttttgtggggttgagttaggcccaaccatgatttttaagatgatatca 167  Q
    ||||||||| |||||||||||||||||   |||||||||| ||| || |||||||||||||||||  ||||||||||||| ||||| ||||||| |||||    
T  2029763 atgacctgacaatgtgtttataagtggaggcaatcctcacctcacaagccggttttgtggggttgttttaggcccaaccacgatttctaagatggtatca 2029862  T
Q  168 gagcatcttcaagatctattgggccacctgctatcaaatttctgctatcggaccac 223  Q
    |||| ||| ||||||| ||||||||||||||||| |  |||| |||||||||||||    
T  2029863 gagcctctccaagatccattgggccacctgctattaggtttccgctatcggaccac 2029918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 73 - 223
Target Start/End: Complemental strand, 14466496 - 14466345
Alignment:
Q  73 cctgataatgtgtttataagtgggaacaatcctcacttcataa-ccggttttgtggggttgagttaggcccaaccatgatttttaagatgatatcagagc 171  Q
    ||||| ||||||||||||||||||| |||||||||| | | || ||||||||||||||||| ||||||||||||||  |||| ||||||| |||||||||    
T  14466496 cctgacaatgtgtttataagtgggagcaatcctcaccttacaagccggttttgtggggttgtgttaggcccaaccaccatttctaagatggtatcagagc 14466397  T
Q  172 atcttcaagatctattgggccacctgctatcaaatttctgctatcggaccac 223  Q
     ||| ||||||| |||||||||| || |||||  |||| |||||||| ||||    
T  14466396 ctctccaagatccattgggccacttgttatcaggtttccgctatcgggccac 14466345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 81 - 203
Target Start/End: Complemental strand, 40379522 - 40379399
Alignment:
Q  81 tgtgtttataagtgggaacaatcctcacttcataa-ccggttttgtggggttgagttaggcccaaccatgatttttaagatgatatcagagcatcttcaa 179  Q
    ||||||||||||||||  |||||||||| ||| || ||||||||||||||||| |||||||||||||| ||||| ||||||| ||||||||| | | |||    
T  40379522 tgtgtttataagtgggggcaatcctcacctcacaagccggttttgtggggttgtgttaggcccaaccacgatttctaagatggtatcagagcctttccaa 40379423  T
Q  180 gatctattgggccacctgctatca 203  Q
    |||| ||| |||||||||||||||    
T  40379422 gatccattaggccacctgctatca 40379399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 114 - 215
Target Start/End: Complemental strand, 21383714 - 21383612
Alignment:
Q  114 aaccggttttgtggggttgagttaggcccaaccatgatttttaagatgatatcagagcat-cttcaagatctattgggccacctgctatcaaatttctgc 212  Q
    ||||||||||||||| |||||||||||||||||| ||||| ||||||| ||||||||| | || |||||||| ||||||||||||||||||| |||||||    
T  21383714 aaccggttttgtgggattgagttaggcccaaccacgatttctaagatggtatcagagcctcctccaagatctgttgggccacctgctatcaagtttctgc 21383615  T
Q  213 tat 215  Q
    |||    
T  21383614 tat 21383612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 118 - 203
Target Start/End: Complemental strand, 93394 - 93309
Alignment:
Q  118 ggttttgtggggttgagttaggcccaaccatgatttttaagatgatatcagagcatcttcaagatctattgggccacctgctatca 203  Q
    ||||||||||||||| |||||||||||||| ||||||||||||| ||||||||| ||| ||||||| |||||||||||||||||||    
T  93394 ggttttgtggggttgtgttaggcccaaccacgatttttaagatggtatcagagcctctccaagatccattgggccacctgctatca 93309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 74 - 203
Target Start/End: Original strand, 2324239 - 2324369
Alignment:
Q  74 ctgataatgtgtttataagtgggaacaatcctcacttcataa-ccggttttgtggggttgagttaggcccaaccatgatttttaagatgatatcagagca 172  Q
    |||| ||| ||||||||||||||  |||||||||| ||| || ||||||||||||||||| |||||||||||||| ||||||||| ||| |||||||||     
T  2324239 ctgacaatttgtttataagtgggggcaatcctcacctcacaagccggttttgtggggttgtgttaggcccaaccacgatttttaatatggtatcagagcc 2324338  T
Q  173 tcttcaagatctattgggccacctgctatca 203  Q
    |||||| |||   |||||||||||| |||||    
T  2324339 tcttcacgattgtttgggccacctgttatca 2324369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 116 - 217
Target Start/End: Original strand, 16419309 - 16419410
Alignment:
Q  116 ccggttttgtggggttgagttaggcccaaccatgatttttaagatgatatcagagcatcttcaagatctattgggccacctgctatcaaatttctgctat 215  Q
    |||||||||||||||||  ||||||||||||| ||||| ||||||| ||||||||| ||| ||||||| |||||||||||||||||||  |||| |||||    
T  16419309 ccggttttgtggggttgtattaggcccaaccacgatttctaagatggtatcagagcctctccaagatccattgggccacctgctatcaggtttccgctat 16419408  T
Q  216 cg 217  Q
    ||    
T  16419409 cg 16419410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 134 - 223
Target Start/End: Complemental strand, 40149260 - 40149171
Alignment:
Q  134 gttaggcccaaccatgatttttaagatgatatcagagcatcttcaagatctattgggccacctgctatcaaatttctgctatcggaccac 223  Q
    ||||||||||||||  |||| ||||||| ||||||||| ||||||||||| |||||| |||||||||||| ||||| |||||||||||||    
T  40149260 gttaggcccaaccacaatttctaagatggtatcagagcctcttcaagatccattgggtcacctgctatcagatttcagctatcggaccac 40149171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 81 - 203
Target Start/End: Complemental strand, 15124861 - 15124738
Alignment:
Q  81 tgtgtttataagtgggaacaatcctcacttcataac-cggttttgtggggttgagttaggcccaaccatgatttttaagatgatatcagagcatcttcaa 179  Q
    |||||||||||||| |  ||||| |||||||| ||  |||||||||||||||| ||||| |||||||| ||||| ||||||| ||||||||  ||| |||    
T  15124861 tgtgtttataagtgagggcaatcttcacttcacaattcggttttgtggggttgtgttagacccaaccacgatttctaagatggtatcagagtctctccaa 15124762  T
Q  180 gatctattgggccacctgctatca 203  Q
    |||| ||||| |||||||||||||    
T  15124761 gatccattggaccacctgctatca 15124738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 73 - 203
Target Start/End: Original strand, 17719398 - 17719529
Alignment:
Q  73 cctgataatgtgtttataagtgggaacaatcctcacttcataa-ccggttttgtggggttgagttaggcccaaccatgatttttaagatgatatcagagc 171  Q
    ||||| ||||||||||||||||||  |||||||||| ||| || |||||||||| |||||| ||| ||||||||||  |||| ||||||| ||||| ||     
T  17719398 cctgacaatgtgtttataagtgggggcaatcctcacctcacaagccggttttgtcgggttgtgttcggcccaaccacaatttctaagatggtatcaaagt 17719497  T
Q  172 atcttcaagatctattgggccacctgctatca 203  Q
     ||| ||||||| ||| |||||||||||||||    
T  17719498 ctctccaagatccatttggccacctgctatca 17719529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 74 - 203
Target Start/End: Original strand, 5509078 - 5509208
Alignment:
Q  74 ctgataatgtgtttataagtgggaacaatcctcacttcataacc-ggttttgtggggttgagttaggcccaaccatgatttttaagatgatatcagagca 172  Q
    |||| ||| ||||||||||||||   ||||||||| ||| || | ||||||||||||||| |||||||||||||||||||| ||| ||| |||||||||     
T  5509078 ctgacaatttgtttataagtgggggtaatcctcacctcacaagctggttttgtggggttgtgttaggcccaaccatgatttctaatatggtatcagagcc 5509177  T
Q  173 tcttcaagatctattgggccacctgctatca 203  Q
    |||||| |||   |||||||||||| |||||    
T  5509178 tcttcacgattctttgggccacctgttatca 5509208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 79 - 216
Target Start/End: Complemental strand, 33606369 - 33606231
Alignment:
Q  79 aatgtgtttataagtgggaacaatcctcacttcataa-ccggttttgtggggttgagttaggcccaaccatgatttttaagatgatatcagagcatcttc 177  Q
    ||||||||||||||||||   ||||||||| ||| || || ||||||||| |||  ||||||| |||||| ||||| ||||||||||||| ||  |||||    
T  33606369 aatgtgtttataagtgggggtaatcctcacctcacaagccagttttgtggcgttatgttaggcacaaccacgatttctaagatgatatcaaagtctcttc 33606270  T
Q  178 aagatctattgggccacctgctatcaaatttctgctatc 216  Q
    ||||||||||||| ||| ||||||||  |||| ||||||    
T  33606269 aagatctattgggtcacttgctatcaggtttccgctatc 33606231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 79 - 203
Target Start/End: Complemental strand, 36352239 - 36352114
Alignment:
Q  79 aatgtgtttataagtgggaacaatcctcacttcataa-ccggttttgtggggttgagttaggcccaaccatgatttttaagatgatatcagagcatcttc 177  Q
    ||||||||||||||||||  ||||| |||| ||| || ||||||||||||||||| ||||||  ||||||  |||||||||||| ||| ||||  |||||    
T  36352239 aatgtgtttataagtgggggcaatcatcacctcaaaagccggttttgtggggttgtgttaggttcaaccacaatttttaagatggtattagagtctcttc 36352140  T
Q  178 aagatctattgggccacctgctatca 203  Q
    |||||| || |||||||||| |||||    
T  36352139 aagatccatcgggccacctgttatca 36352114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 69 - 162
Target Start/End: Original strand, 2029998 - 2030092
Alignment:
Q  69 atgacctgataatgtgtttataagtgggaacaatcctcacttcataa-ccggttttgtggggttgagttaggcccaaccatgatttttaagatga 162  Q
    ||||||||| |||||||||||||||||   |||||||||| ||| || |||||||||||||||||  ||||||||||||| ||||| ||||||||    
T  2029998 atgacctgacaatgtgtttataagtggaggcaatcctcacctcacaagccggttttgtggggttgttttaggcccaaccacgatttctaagatga 2030092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 74 - 159
Target Start/End: Original strand, 16419501 - 16419587
Alignment:
Q  74 ctgataatgtgtttataagtgggaacaatcctcacttcataa-ccggttttgtggggttgagttaggcccaaccatgatttttaaga 159  Q
    |||| ||||||||||||||||||  |||||||||| ||| || ||||||||||||||||| |||||||||||||| ||||| |||||    
T  16419501 ctgacaatgtgtttataagtgggggcaatcctcacctcacaagccggttttgtggggttgtgttaggcccaaccacgatttctaaga 16419587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 69 - 216
Target Start/End: Original strand, 14927096 - 14927245
Alignment:
Q  69 atgacctgataatgtgtttataagtgggaacaatcctcacttcataa-ccggttttgtggggttgagttaggcccaaccatgatttttaagatgatatca 167  Q
    ||||||||| ||||||||||||||||||  |||||||||| ||||||  | | |||||| ||||| ||||||| |||||| ||||| |||||| | ||||    
T  14927096 atgacctgacaatgtgtttataagtgggggcaatcctcacctcataagtcagctttgtgtggttgtgttaggctcaaccacgatttctaagataacatca 14927195  T
Q  168 gagcat-cttcaagatctattgggccacctgctatcaaatttctgctatc 216  Q
    |||| | ||||| ||||  ||||| ||||||||||||  |||||| ||||    
T  14927196 gagcctccttcatgatccgttgggacacctgctatcaggtttctgttatc 14927245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 79 - 199
Target Start/End: Original strand, 24395868 - 24395988
Alignment:
Q  79 aatgtgtttataagtgggaacaatcctcacttcataac-cggttttgtggggttgagttaggcccaaccatgatttttaagatgatatcagagcatcttc 177  Q
    ||||||||||| ||||||  |||||||||| ||| ||  || ||||||||||||| |||||||| ||||| ||||| ||||| | ||||||||| |||||    
T  24395868 aatgtgtttatgagtgggg-caatcctcacctcacaaatcgattttgtggggttgtgttaggccaaaccacgatttctaagagggtatcagagcctcttc 24395966  T
Q  178 aagatctattgggccacctgct 199  Q
    |||||| ||||| |||||||||    
T  24395967 aagatccattggaccacctgct 24395988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 83 - 171
Target Start/End: Complemental strand, 28407869 - 28407780
Alignment:
Q  83 tgtttataagtgggaacaatcctcacttcataa-ccggttttgtggggttgagttaggcccaaccatgatttttaagatgatatcagagc 171  Q
    ||||||||||||||  |||||||||| ||| || |||||||||||| |||| |||||||||||||| ||||| ||||||| |||||||||    
T  28407869 tgtttataagtgggggcaatcctcacctcacaagccggttttgtggagttgtgttaggcccaaccacgatttctaagatggtatcagagc 28407780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 68 - 159
Target Start/End: Complemental strand, 5711530 - 5711438
Alignment:
Q  68 aatgacctgataatgtgtttataagtgggaacaatcctcacttcataa-ccggttttgtggggttgagttaggcccaaccatgatttttaaga 159  Q
    |||| ||||| ||||||||||||||||||  |||||||||| | | || ||||||||||||||||| |||||||||||||| ||||| |||||    
T  5711530 aatggcctgacaatgtgtttataagtgggggcaatcctcacctaacaagccggttttgtggggttgtgttaggcccaaccacgatttctaaga 5711438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 73 - 203
Target Start/End: Complemental strand, 5711761 - 5711629
Alignment:
Q  73 cctgataatgtgtttataagtgggaacaatcctcacttcataa-ccggttttgtggggttgagttaggcccaaccatgatttttaagatgatatcagagc 171  Q
    ||||| ||||||||||||||||||  ||||| |||| | | || ||||||||||||||||| ||||||||||||||  |||| ||||||  |||||||||    
T  5711761 cctgacaatgtgtttataagtgggggcaatcatcaccttaaaagccggttttgtggggttgtgttaggcccaaccaccatttctaagatagtatcagagc 5711662  T
Q  172 at-cttcaagatctattgggccacctgctatca 203  Q
     | || |||||||  |||| |||||||||||||    
T  5711661 ctcctccaagatccgttggaccacctgctatca 5711629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 83 - 153
Target Start/End: Complemental strand, 19191686 - 19191615
Alignment:
Q  83 tgtttataagtgggaacaatcctcacttcataa-ccggttttgtggggttgagttaggcccaaccatgattt 153  Q
    |||||||||||||| ||||||||||| ||| || ||||||||||||||||| |||||||||||||| |||||    
T  19191686 tgtttataagtggggacaatcctcacctcacaagccggttttgtggggttgtgttaggcccaaccacgattt 19191615  T

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Target: chr2; HSP #22
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 69 - 171
Target Start/End: Original strand, 37840331 - 37840434
Alignment:
Q  69 atgacctgataatgtgtttataagtgggaacaatcctcacttcataa-ccggttttgtggggttgagttaggcccaaccatgatttttaagatgatatca 167  Q
    ||||||||| |||||||||||||||||   ||||| |||| ||| || ||||||||||||||||| ||| ||||||||||  |||||||||||| ||| |    
T  37840331 atgacctgacaatgtgtttataagtggaggcaatcatcacctcacaagccggttttgtggggttgtgttgggcccaaccacaatttttaagatggtatta 37840430  T
Q  168 gagc 171  Q
    ||||    
T  37840431 gagc 37840434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 81 - 159
Target Start/End: Complemental strand, 40379287 - 40379208
Alignment:
Q  81 tgtgtttataagtgggaacaatcctcacttcataa-ccggttttgtggggttgagttaggcccaaccatgatttttaaga 159  Q
    ||||||||||||||||  |||||||||| ||| || ||||||||||||||||| |||||||||||||| ||||| |||||    
T  40379287 tgtgtttataagtgggggcaatcctcacctcacaagccggttttgtggggttgtgttaggcccaaccacgatttctaaga 40379208  T

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Target: chr2; HSP #24
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 118 - 203
Target Start/End: Complemental strand, 93667 - 93582
Alignment:
Q  118 ggttttgtggggttgagttaggcccaaccatgatttttaagatgatatcagagcatcttcaagatctattgggccacctgctatca 203  Q
    ||||||||||||||| |||||||||||||| ||||| ||||||| ||||||| | | | ||||||| |||||| ||||| ||||||    
T  93667 ggttttgtggggttgtgttaggcccaaccacgatttctaagatggtatcagaacctttccaagatccattgggtcacctactatca 93582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 74 - 203
Target Start/End: Complemental strand, 17525423 - 17525289
Alignment:
Q  74 ctgataatgtgtttataagtgggaacaatcctcacttcataa-ccggttttgtggggttgagttaggcccaacc------atgatttttaagatgatatc 166  Q
    |||| ||||||||||||||||||  |||||||||| ||| || ||||||||||||| ||| | |||||||||||      |||| || |||||||||||     
T  17525423 ctgacaatgtgtttataagtgggggcaatcctcacctcacaagccggttttgtgggattgtg-taggcccaaccacgagaatgaattctaagatgatata 17525325  T
Q  167 agagcatcttcaagatctattgggccacctgctatca 203  Q
    ||||| ||||||| ||| |||||||||||||||||||    
T  17525324 agagcctcttcaa-atccattgggccacctgctatca 17525289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 70 - 170
Target Start/End: Complemental strand, 17855018 - 17854917
Alignment:
Q  70 tgacctgataatgtgtttataagtgggaacaatcctcacttcataa-ccggttttgtggggttgagttaggcccaaccatgatttttaagatgatatcag 168  Q
    |||||||| ||| |||||||||||| |  |||||||||| ||| || ||||||||||||||||| | ||| |||||||| ||||| ||| ||||||||||    
T  17855018 tgacctgacaatttgtttataagtgagggcaatcctcacctcacaagccggttttgtggggttgtgctagacccaaccacgatttctaatatgatatcag 17854919  T
Q  169 ag 170  Q
    ||    
T  17854918 ag 17854917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 81 - 153
Target Start/End: Complemental strand, 40149081 - 40149008
Alignment:
Q  81 tgtgtttataagtgggaacaatcctcacttcataa-ccggttttgtggggttgagttaggcccaaccatgattt 153  Q
    |||||||||||||||| ||||||||||| ||| || ||| ||||||||||||| |||||| |||||||||||||    
T  40149081 tgtgtttataagtggggacaatcctcacctcacaagccgattttgtggggttgtgttaggtccaaccatgattt 40149008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 69 - 199
Target Start/End: Original strand, 32356380 - 32356510
Alignment:
Q  69 atgacctgataatgtgtttataagtgggaacaatcctcacttcataa-ccggttttgtggggttgagttaggcccaaccatgatttttaagatgatatca 167  Q
    ||||| ||| ||||||||||||||||||  ||||||||||  || || || ||||||||| |||| |||||||||||| | || || |||| || |||||    
T  32356380 atgacatgacaatgtgtttataagtgggggcaatcctcacc-cacaagccagttttgtggagttgtgttaggcccaactacgaattctaagttggtatca 32356478  T
Q  168 gagcatcttcaagatctattgggccacctgct 199  Q
    |||| ||||||| ||  |||||||||||||||    
T  32356479 gagcctcttcaatattcattgggccacctgct 32356510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 83 - 157
Target Start/End: Complemental strand, 37770019 - 37769944
Alignment:
Q  83 tgtttataagtgggaacaatcctcacttcataa-ccggttttgtggggttgagttaggcccaaccatgatttttaa 157  Q
    ||||||||||||||  ||||| |||| |||||| ||||||||||||||||| ||||| |||||||| |||||||||    
T  37770019 tgtttataagtgggggcaatcttcacctcataagccggttttgtggggttgtgttagacccaaccacgatttttaa 37769944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 74 - 159
Target Start/End: Complemental strand, 15124633 - 15124547
Alignment:
Q  74 ctgataatgtgtttataagtgggaacaatcctcacttcataa-ccggttttgtggggttgagttaggcccaaccatgatttttaaga 159  Q
    |||| ||| ||||||||||||||  |||||| ||| |||||| ||| ||||||||||||| ||||| |||||||| |||||||||||    
T  15124633 ctgacaatatgtttataagtgggggcaatccccacctcataagccgattttgtggggttgtgttagacccaaccacgatttttaaga 15124547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 73 - 172
Target Start/End: Complemental strand, 27036498 - 27036401
Alignment:
Q  73 cctgataatgtgtttataagtgggaacaatcctcacttcataa-ccggttttgtggggttgagttaggcccaaccatgatttttaagatgatatcagagc 171  Q
    ||||| ||| ||||||||||||||  |||||| |   |||||| |||||||||| |||||| |||||||||||||||||||| ||| ||| |||||||||    
T  27036498 cctgacaatttgtttataagtgggggcaatcccc---tcataagccggttttgtagggttgtgttaggcccaaccatgatttctaatatggtatcagagc 27036402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 73 - 153
Target Start/End: Original strand, 2324472 - 2324553
Alignment:
Q  73 cctgataatgtgtttataagtgggaacaatcctcacttcataa-ccggttttgtggggttgagttaggcccaaccatgattt 153  Q
    ||||| ||| ||||||||||||||  |||||||||| ||| || ||||||||||||||||| ||||||| |||||| |||||    
T  2324472 cctgacaatttgtttataagtgggggcaatcctcacctcacaagccggttttgtggggttgtgttaggctcaaccacgattt 2324553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 83 - 171
Target Start/End: Original strand, 29718336 - 29718425
Alignment:
Q  83 tgtttataagtgggaacaatcctcacttcataa-ccggttttgtggggttgagttaggcccaaccatgatttttaagatgatatcagagc 171  Q
    |||||||||||| |  |||||||||| ||| || ||||||||||||||||| |||||||| ||||| ||||| |||| || |||||||||    
T  29718336 tgtttataagtgagggcaatcctcacctcacaagccggttttgtggggttgtgttaggcctaaccacgatttctaagttggtatcagagc 29718425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 73 - 145
Target Start/End: Original strand, 32884105 - 32884178
Alignment:
Q  73 cctgataatgtgtttataagtgggaacaatcctcacttcataa-ccggttttgtggggttgagttaggcccaac 145  Q
    ||||| ||| ||||||||||||||  |||||||||| ||| || ||||||||||||||||| ||||||||||||    
T  32884105 cctgacaatttgtttataagtgggggcaatcctcacctcacaagccggttttgtggggttgtgttaggcccaac 32884178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 84 - 159
Target Start/End: Original strand, 17719575 - 17719651
Alignment:
Q  84 gtttataagtgggaacaatcctcacttcataa-ccggttttgtggggttgagttaggcccaaccatgatttttaaga 159  Q
    |||||||||||||  ||||||| || ||| || ||||||||||||||||| |||||||||||||| ||||| |||||    
T  17719575 gtttataagtgggggcaatcctgacctcacaaaccggttttgtggggttgtgttaggcccaaccacgatttctaaga 17719651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 74 - 159
Target Start/End: Complemental strand, 5851767 - 5851680
Alignment:
Q  74 ctgataatgtgtttataagtgggaacaatcctcacttcataa-ccggttttgtgg-ggttgagttaggcccaaccatgatttttaaga 159  Q
    |||| ||||| |||||||||||| ||||||||||| ||| || |||||||||||| ||||| |||||| |||||||| |||| |||||    
T  5851767 ctgacaatgtatttataagtggggacaatcctcacctcacaagccggttttgtggaggttgtgttaggtccaaccatcatttctaaga 5851680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 69 - 223
Target Start/End: Complemental strand, 37812588 - 37812438
Alignment:
Q  69 atgacctgataatgtgtttataagtgggaacaatcctcacttcataac-cggttttgtggggttgagttaggcccaaccatgatttttaagatgatatca 167  Q
    ||||||||| ||||||||||||||||||  |||||||||| ||| ||  || ||||||  || |||||||||||| |     | ||  || ||| ||||     
T  37812588 atgacctgacaatgtgtttataagtgggggcaatcctcacctcacaagtcgattttgtaaggatgagttaggcccca-----aattacaacatggtatcg 37812494  T
Q  168 gagcatcttcaagatctattgggccacctgctatcaaatttctgctatcggaccac 223  Q
    |||| ||| ||||||| |||||||||||||||||||  ||||||||||||| ||||    
T  37812493 gagcctctccaagatccattgggccacctgctatcaggtttctgctatcgggccac 37812438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 116 - 170
Target Start/End: Original strand, 10571012 - 10571066
Alignment:
Q  116 ccggttttgtggggttgagttaggcccaaccatgatttttaagatgatatcagag 170  Q
    ||||||||||||||||| ||||||| |||||| ||||| ||||||| ||||||||    
T  10571012 ccggttttgtggggttgtgttaggctcaaccacgatttctaagatggtatcagag 10571066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 117 - 218
Target Start/End: Original strand, 13210569 - 13210671
Alignment:
Q  117 cggttttgtggggttgagttaggcccaaccatgatttttaagatgatatcagag-catcttcaagatctattgggccacctgctatcaaatttctgctat 215  Q
    |||||||||||||| | ||||||||||||||  | || ||||||| |||||||| |  || ||||||| |||||||||| |||||||| |||||  ||||    
T  13210569 cggttttgtggggtcgtgttaggcccaaccacaaattctaagatggtatcagagactcctccaagatccattgggccacatgctatcagatttcctctat 13210668  T
Q  216 cgg 218  Q
    |||    
T  13210669 cgg 13210671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 73 - 138
Target Start/End: Original strand, 16533545 - 16533611
Alignment:
Q  73 cctgataatgtgtttataagtgggaacaatcctcacttcataa-ccggttttgtggggttgagttag 138  Q
    ||||| ||||||||||||||||||  |||||||||||||| || ||||||||||| ||||| |||||    
T  16533545 cctgacaatgtgtttataagtgggggcaatcctcacttcacaagccggttttgtgaggttgtgttag 16533611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 66 - 159
Target Start/End: Complemental strand, 19571067 - 19570973
Alignment:
Q  66 ataatgacctgataatgtgtttataagtgggaacaatcctcacttcataa-ccggttttgtggggttgagttaggcccaaccatgatttttaaga 159  Q
    ||||||| ||||  |||||||||||||||||  |||||||||| ||||||  || ||||||||  ||| |||||||||||||| ||||| |||||    
T  19571067 ataatgaactgaacatgtgtttataagtgggggcaatcctcacctcataagtcgattttgtggaattgtgttaggcccaaccacgatttctaaga 19570973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 134 - 223
Target Start/End: Complemental strand, 2375187 - 2375098
Alignment:
Q  134 gttaggcccaaccatgatttttaagatgatatcagagcatcttcaagatctattgggccacctgctatcaaatttctgctatcggaccac 223  Q
    ||||||| ||| || ||||||||||||||||||||||  | |||| |||  |||||| |||||||||||| ||||  | |||||||||||    
T  2375187 gttaggctcaatcaagatttttaagatgatatcagagtcttttcaggattcattgggtcacctgctatcagattttcgttatcggaccac 2375098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 68 - 160
Target Start/End: Complemental strand, 19544461 - 19544369
Alignment:
Q  68 aatgacctgataatgtgtttataagtgggaacaatcctcacttcataa-ccggttttgtggggttgagttaggcccaaccatgatttttaagat 160  Q
    |||||||||||||||||||||||||||||  |||| ||||| ||| || |||||||||||| | |  |||||| ||||||| ||||| ||||||    
T  19544461 aatgacctgataatgtgtttataagtgggggcaat-ctcacctcacaagccggttttgtggagctatgttaggtccaaccacgatttctaagat 19544369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 143 - 218
Target Start/End: Original strand, 21840151 - 21840226
Alignment:
Q  143 aaccatgatttttaagatgatatcagagcatct-tcaagatctattgggccacctgctatcaaatttctgctatcgg 218  Q
    ||||||||||||| | ||  ||| ||||||||| | |||||||||||  ||||||||||||||||||||||||||||    
T  21840151 aaccatgattttttaaatagtattagagcatctgttaagatctattga-ccacctgctatcaaatttctgctatcgg 21840226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 155 - 223
Target Start/End: Original strand, 34893506 - 34893574
Alignment:
Q  155 taagatgatatcagagcatcttcaagatctattgggccacctgctatcaaatttctgctatcggaccac 223  Q
    ||||||| ||||||||| ||| ||||||| |||||||||||| ||||||  |||  |||||||||||||    
T  34893506 taagatggtatcagagcctctccaagatccattgggccacctactatcaggttttcgctatcggaccac 34893574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 70 - 157
Target Start/End: Complemental strand, 40718296 - 40718208
Alignment:
Q  70 tgacctgataatgtgtttataagtgggaacaatcctcacttcataa-ccggttttgtggggttgagttaggcccaaccatgatttttaa 157  Q
    |||||| | ||| |||||||||||| |  ||||| |||| ||| || |||||||||||| |||| ||||||||||||||| ||||||||    
T  40718296 tgacctaacaatttgtttataagtgagggcaatcatcacctcacaaaccggttttgtggagttgtgttaggcccaaccatcatttttaa 40718208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 83 - 157
Target Start/End: Original strand, 5509321 - 5509396
Alignment:
Q  83 tgtttataagtgggaacaatcctcacttcataa-ccggttttgtggggttgagttaggcccaaccatgatttttaa 157  Q
    ||||||||||||||  ||||||||||  || || ||||||||||||||| | |||||| ||||||| |||||||||    
T  5509321 tgtttataagtgggggcaatcctcaccccacaagccggttttgtggggtagtgttaggtccaaccacgatttttaa 5509396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 74 - 196
Target Start/End: Original strand, 15464768 - 15464891
Alignment:
Q  74 ctgataatgtgtttataagtgggaacaatcctcacttcataa-ccggttttgtggggttgagttaggcccaaccatgatttttaagatgatatcagagca 172  Q
    |||| ||||||| | ||||||||  |||||||||| ||| || || |||||||||||||| |||||||  ||||| || || | ||||| |||| |||||    
T  15464768 ctgacaatgtgtatttaagtgggggcaatcctcacctcacaaaccagttttgtggggttgtgttaggcttaaccacgacttattagatggtatcggagca 15464867  T
Q  173 tcttcaagatctattgggccacct 196  Q
    ||||||| ||  ||||| ||||||    
T  15464868 tcttcaaaattcattggaccacct 15464891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 69 - 147
Target Start/End: Complemental strand, 17525189 - 17525110
Alignment:
Q  69 atgacctgataatgtgtttataagtgggaacaatcctcacttcataa-ccggttttgtggggttgagttaggcccaacca 147  Q
    ||||||||| ||||||||||||| |||||| |||||||||  || || ||||||||||||  ||| || |||||||||||    
T  17525189 atgacctgacaatgtgtttataaatgggaagaatcctcaccgcacaagccggttttgtggaattgtgtcaggcccaacca 17525110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 73 - 167
Target Start/End: Complemental strand, 27897691 - 27897597
Alignment:
Q  73 cctgataatgtgtttataagtgggaacaatcctcacttcataac-cggttttgtggggttgagttaggcccaaccatgatttttaagatgatatca 167  Q
    ||||| ||| ||||||||||||||  |||| ||||| ||| ||  |||||||||||||||| ||||||||||||||  |||| ||||||| |||||    
T  27897691 cctgacaatttgtttataagtgggg-caattctcacctcacaagtcggttttgtggggttgtgttaggcccaaccaccatttctaagatggtatca 27897597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 135 - 194
Target Start/End: Complemental strand, 31700995 - 31700936
Alignment:
Q  135 ttaggcccaaccatgatttttaagatgatatcagagcatcttcaagatctattgggccac 194  Q
    ||||||||||||| ||||| ||||||| ||| ||||| ||| ||||||| ||||||||||    
T  31700995 ttaggcccaaccacgatttctaagatggtattagagcctctccaagatccattgggccac 31700936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 74 - 159
Target Start/End: Complemental strand, 25082622 - 25082536
Alignment:
Q  74 ctgataatgtgtttataagtgggaacaatcctcacttcataa-ccggttttgtggggttgagttaggcccaaccatgatttttaaga 159  Q
    |||| ||||||||||||||| ||  ||||| |||| ||| || || |||||||||||||| |||||| ||||||| ||||| |||||    
T  25082622 ctgacaatgtgtttataagtaggggcaatcatcacctcacaagccagttttgtggggttgtgttaggtccaaccacgatttctaaga 25082536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 74 - 147
Target Start/End: Complemental strand, 42639699 - 42639625
Alignment:
Q  74 ctgataatgtgtttataagtgggaacaatcctcacttcataacc-ggttttgtggggttgagttaggcccaacca 147  Q
    |||| ||||||||||||| |||| |||||| |||| ||| || | ||||||||||||||| ||||| ||||||||    
T  42639699 ctgacaatgtgtttataaatggggacaatcgtcacctcacaagctggttttgtggggttgtgttagacccaacca 42639625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 79 - 147
Target Start/End: Complemental strand, 12343830 - 12343761
Alignment:
Q  79 aatgtgtttataagtgggaacaatcctcacttcataac-cggttttgtggggttgagttaggcccaacca 147  Q
    |||||| |||||||||||  |||||||||| ||||||  | |||||||||||||| ||||| ||||||||    
T  12343830 aatgtgcttataagtgggggcaatcctcacatcataagtcagttttgtggggttgtgttagacccaacca 12343761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 150 - 218
Target Start/End: Complemental strand, 19571202 - 19571133
Alignment:
Q  150 atttttaagatgatatcagagcatcttc-aagatctattgggccacctgctatcaaatttctgctatcgg 218  Q
    |||||||| ||| ||||||||| ||||| |||||  |||||||||||| ||||||| ||| |||||||||    
T  19571202 atttttaatatggtatcagagcctcttctaagattcattgggccacctactatcaagtttttgctatcgg 19571133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 163 - 203
Target Start/End: Original strand, 16533401 - 16533441
Alignment:
Q  163 tatcagagcatcttcaagatctattgggccacctgctatca 203  Q
    ||||||||| ||||||||||| ||||||| |||||||||||    
T  16533401 tatcagagcctcttcaagatccattgggctacctgctatca 16533441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 74 - 196
Target Start/End: Original strand, 21591780 - 21591903
Alignment:
Q  74 ctgataatgtgtttataagtgggaa-caatcctcacttcataac-cggttttgtggggttgagttaggcccaaccatgatttttaagatgatatcagagc 171  Q
    |||| ||| ||||||||||||||   ||||| |||| ||||||  ||||||| |||||||| |||||||||||||| ||||| |||| || || |||||     
T  21591780 ctgacaatttgtttataagtggggggcaatcttcacctcataagtcggttttatggggttgtgttaggcccaaccacgatttctaagttggtagcagagt 21591879  T
Q  172 atcttcaagatctattgggccacct 196  Q
     |||||| ||| | |||||||||||    
T  21591880 ctcttcacgat-tcttgggccacct 21591903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 74; Significance: 4e-34; HSPs: 71)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 79 - 223
Target Start/End: Original strand, 9368599 - 9368744
Alignment:
Q  79 aatgtgtttataagtgggaacaatcctcacttcataa-ccggttttgtggggttgagttaggcccaaccatgatttttaagatgatatcagagcatcttc 177  Q
    |||||||||||||||||   |||||||||| ||| || ||||||||||||||||| ||||||||||||||| |||| |||| || ||||||||| |||||    
T  9368599 aatgtgtttataagtggaggcaatcctcacctcacaagccggttttgtggggttgtgttaggcccaaccataatttctaaggtggtatcagagcctcttc 9368698  T
Q  178 aagatctattgggccacctgctatcaaatttctgctatcggaccac 223  Q
    |||||| |||||||||||||||||||  |||| ||||| |||||||    
T  9368699 aagatccattgggccacctgctatcaggtttccgctattggaccac 9368744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 74 - 203
Target Start/End: Original strand, 15480321 - 15480451
Alignment:
Q  74 ctgataatgtgtttataagtgggaacaatcctcacttcataacc-ggttttgtggggttgagttaggcccaaccatgatttttaagatgatatcagagca 172  Q
    |||| ||||||||||||||||||  |||||||||| ||| || | ||||||||||||||  |||||||||||||| ||||| ||||||| |||||||||     
T  15480321 ctgacaatgtgtttataagtgggggcaatcctcacctcacaagctggttttgtggggttctgttaggcccaaccacgatttctaagatggtatcagagcc 15480420  T
Q  173 tcttcaagatctattgggccacctgctatca 203  Q
    ||||||||||| |||||||||||||||||||    
T  15480421 tcttcaagatccattgggccacctgctatca 15480451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 74 - 201
Target Start/End: Original strand, 24528539 - 24528667
Alignment:
Q  74 ctgataatgtgtttataagtgggaacaatcctcacttcataa-ccggttttgtggggttgagttaggcccaaccatgatttttaagatgatatcagagca 172  Q
    |||| ||||||||||||||||||  |||||||||| ||| || ||||||||||||||||| |||||||||||||||||||| ||||||| |||||||||     
T  24528539 ctgacaatgtgtttataagtgggggcaatcctcacctcacaagccggttttgtggggttgtgttaggcccaaccatgatttctaagatggtatcagagcc 24528638  T
Q  173 tcttcaagatctattgggccacctgctat 201  Q
    ||| || |||| ||||| |||||||||||    
T  24528639 tctccatgatccattggaccacctgctat 24528667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 69 - 223
Target Start/End: Original strand, 24531593 - 24531748
Alignment:
Q  69 atgacctgataatgtgtttataagtgggaacaatcctcacttcataa-ccggttttgtggggttgagttaggcccaaccatgatttttaagatgatatca 167  Q
    ||||||||| ||||||||||||||||||  |||||||||| ||| || ||| ||||||||||||| |||| ||||||||| ||||| ||||||| |||||    
T  24531593 atgacctgacaatgtgtttataagtgggggcaatcctcacctcacaagccgattttgtggggttgtgttatgcccaaccacgatttctaagatggtatca 24531692  T
Q  168 gagcatcttcaagatctattgggccacctgctatcaaatttctgctatcggaccac 223  Q
    |||| |||  | |||| |||||||||||||||||||  |||||| ||||| |||||    
T  24531693 gagcctctctatgatccattgggccacctgctatcagttttctgttatcgaaccac 24531748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 73 - 203
Target Start/End: Complemental strand, 41667079 - 41666947
Alignment:
Q  73 cctgataatgtgtttataagtgggaacaatcctcacttcataa-ccggttttgtggggttgagttaggcccaaccatgatttttaagatgatatcagagc 171  Q
    ||||| ||||||||||||||||||  |||||||||| ||| || ||||||||||||||||| |||||||||||||| ||||| ||||||| |||||||||    
T  41667079 cctgacaatgtgtttataagtgggggcaatcctcacctcacaagccggttttgtggggttgtgttaggcccaaccacgatttctaagatggtatcagagc 41666980  T
Q  172 at-cttcaagatctattgggccacctgctatca 203  Q
     | || |||||||  ||||||||||||||||||    
T  41666979 ctcctccaagatccgttgggccacctgctatca 41666947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 79 - 223
Target Start/End: Complemental strand, 6919508 - 6919364
Alignment:
Q  79 aatgtgtttataagtgggaacaatcctcacttcataaccggttttgtggggttgagttaggcccaaccatgatttttaagatgatatcagagcatcttca 178  Q
    |||||||||||||||||| ||||| ||||| ||| || | |||||||| ||||| ||||||| |||||| ||||||||||||| ||||| ||| ||||||    
T  6919508 aatgtgtttataagtggggacaattctcacctcacaagcagttttgtgaggttgtgttaggctcaaccacgatttttaagatggtatcaaagcctcttca 6919409  T
Q  179 agatctattgggccacctgctatcaaatttctgctatcggaccac 223  Q
    ||||| |||| | || |||||||||  |||| ||| |||||||||    
T  6919408 agatccattgagtcatctgctatcaggtttccgctttcggaccac 6919364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 79 - 203
Target Start/End: Complemental strand, 6413737 - 6413612
Alignment:
Q  79 aatgtgtttataagtgggaacaatcctcacttcataa-ccggttttgtggggttgagttaggcccaaccatgatttttaagatgatatcagagcatcttc 177  Q
    ||||||||||||||| || ||||||||||| |||||| |||||||| |||||||| ||||  |||||| | ||||| ||| ||| ||||| ||| |||||    
T  6413737 aatgtgtttataagtagggacaatcctcacctcataagccggttttttggggttgtgttaaacccaacaacgatttctaatatggtatcaaagcctcttc 6413638  T
Q  178 aagatctattgggccacctgctatca 203  Q
    |||||| |||||||||||||||||||    
T  6413637 aagatccattgggccacctgctatca 6413612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 83 - 223
Target Start/End: Complemental strand, 25258377 - 25258236
Alignment:
Q  83 tgtttataagtgggaacaatcctcacttcataac-cggttttgtggggttgagttaggcccaaccatgatttttaagatgatatcagagcatcttcaaga 181  Q
    ||||||| ||||||  |||||||||| ||| ||  |||||||||||||||| ||||  | |||||| ||||| ||||||| ||||||||| ||| |||||    
T  25258377 tgtttatcagtgggggcaatcctcacctcacaagtcggttttgtggggttgtgttaaactcaaccacgatttctaagatggtatcagagcttctccaaga 25258278  T
Q  182 tctattgggccacctgctatcaaatttctgctatcggaccac 223  Q
    || |||||||||||||||||||  |||| |||||||||||||    
T  25258277 tccattgggccacctgctatcaggtttccgctatcggaccac 25258236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 83 - 223
Target Start/End: Complemental strand, 25322167 - 25322026
Alignment:
Q  83 tgtttataagtgggaacaatcctcacttcataac-cggttttgtggggttgagttaggcccaaccatgatttttaagatgatatcagagcatcttcaaga 181  Q
    ||||||| ||||||  |||||||||| ||| ||  |||||||||||||||| ||||  | |||||| ||||| ||||||| ||||||||| ||| |||||    
T  25322167 tgtttatcagtgggggcaatcctcacctcacaagtcggttttgtggggttgtgttaaactcaaccacgatttctaagatggtatcagagcttctccaaga 25322068  T
Q  182 tctattgggccacctgctatcaaatttctgctatcggaccac 223  Q
    || |||||||||||||||||||  |||| |||||||||||||    
T  25322067 tccattgggccacctgctatcaggtttccgctatcggaccac 25322026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 74 - 189
Target Start/End: Complemental strand, 2063818 - 2063703
Alignment:
Q  74 ctgataatgtgtttataagtgggaacaatcctcacttcataac-cggttttgtggggttgagttaggcccaaccatgatttttaagatgatatcagagca 172  Q
    |||| ||||||||||||||||||  ||||||||||| || ||  |||||||||||||||| |||||||||||||| ||||| ||||||| |||||||||     
T  2063818 ctgacaatgtgtttataagtgggggcaatcctcact-cacaagtcggttttgtggggttgtgttaggcccaaccacgatttctaagatggtatcagagcc 2063720  T
Q  173 tcttcaagatctattgg 189  Q
    ||||||||||| |||||    
T  2063719 tcttcaagatccattgg 2063703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 73 - 203
Target Start/End: Complemental strand, 24346823 - 24346691
Alignment:
Q  73 cctgataatgtgtttataagtgggaacaatcctcacttcataa-ccggttttgtggggttgagttaggcccaaccatgatttttaagatgatatcagagc 171  Q
    ||||| ||||| ||||||||||||   ||| ||||| ||| || ||||||||||||||||| ||||| |||||||| ||||||||||||| |||||||||    
T  24346823 cctgacaatgtatttataagtgggggtaatactcacctcacaagccggttttgtggggttgtgttagacccaaccacgatttttaagatggtatcagagc 24346724  T
Q  172 at-cttcaagatctattgggccacctgctatca 203  Q
     | || ||||||| |||||||||||||||||||    
T  24346723 ctcctccaagatccattgggccacctgctatca 24346691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 116 - 203
Target Start/End: Complemental strand, 18333741 - 18333654
Alignment:
Q  116 ccggttttgtggggttgagttaggcccaaccatgatttttaagatgatatcagagcatcttcaagatctattgggccacctgctatca 203  Q
    ||||||||||||||||| |||||||||||||| || || ||||||| ||||||||| ||||||||||| || ||||||||||||||||    
T  18333741 ccggttttgtggggttgtgttaggcccaaccacgaattctaagatggtatcagagcctcttcaagatccatcgggccacctgctatca 18333654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 121 - 223
Target Start/End: Original strand, 43117694 - 43117796
Alignment:
Q  121 tttgtggggttgagttaggcccaaccatgatttttaagatgatatcagagcatcttcaagatctattgggccacctgctatcaaatttctgctatcggac 220  Q
    |||||||||||| |||||||||||| | ||||| ||||||  ||||||||| | | |||||||||||||||||||||||||||  |||| ||||||||||    
T  43117694 tttgtggggttgtgttaggcccaacaacgatttctaagatagtatcagagcctttccaagatctattgggccacctgctatcaggtttccgctatcggac 43117793  T
Q  221 cac 223  Q
    |||    
T  43117794 cac 43117796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 117 - 218
Target Start/End: Complemental strand, 32908993 - 32908892
Alignment:
Q  117 cggttttgtggggttgagttaggcccaaccatgatttttaagatgatatcagagcatcttcaagatctattgggccacctgctatcaaatttctgctatc 216  Q
    |||||||||||||||| ||||| | ||||||  |||| ||||||||||| ||||| ||||||||||| ||||||||| |||||||||  |||||||||||    
T  32908993 cggttttgtggggttgtgttagactcaaccacaatttctaagatgatattagagcctcttcaagatccattgggccatctgctatcaggtttctgctatc 32908894  T
Q  217 gg 218  Q
    ||    
T  32908893 gg 32908892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 125 - 223
Target Start/End: Complemental strand, 17150501 - 17150403
Alignment:
Q  125 tggggttgagttaggcccaaccatgatttttaagatgatatcagagcatcttcaagatctattgggccacctgctatcaaatttctgctatcggaccac 223  Q
    |||||||| ||||||| |||| | ||||||||||||| ||||||||| ||||||||||| |||||||||||| ||||||  |||| |||||||| ||||    
T  17150501 tggggttgtgttaggctcaactacgatttttaagatggtatcagagcctcttcaagatccattgggccacctactatcaggtttccgctatcgggccac 17150403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 73 - 171
Target Start/End: Complemental strand, 8081200 - 8081100
Alignment:
Q  73 cctgataatgtgtttataagtgggaa-caatcctcacttcataa-ccggttttgtggggttgagttaggcccaaccatgatttttaagatgatatcagag 170  Q
    ||||| ||||||||||||||||||   |||||||||  ||| || ||||||||||||||||| |||||||||||||||||||| ||||||| ||||||||    
T  8081200 cctgacaatgtgtttataagtggggggcaatcctcatctcacaagccggttttgtggggttgtgttaggcccaaccatgatttctaagatggtatcagag 8081101  T
Q  171 c 171  Q
    |    
T  8081100 c 8081100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 73 - 203
Target Start/End: Complemental strand, 24270191 - 24270060
Alignment:
Q  73 cctgataatgtgtttataagtgggaacaatcctcacttcataa-ccggttttgtggggttgagttaggcccaaccatgatttttaagatgatatcagagc 171  Q
    ||||| ||||| ||||||||||||   ||| ||||| ||| || ||||||||||||||||| ||||| || ||||| ||||||||||||| |||||||||    
T  24270191 cctgacaatgtatttataagtgggggtaatactcacctcacaagccggttttgtggggttgtgttagacc-aaccacgatttttaagatggtatcagagc 24270093  T
Q  172 atcttc-aagatctattgggccacctgctatca 203  Q
     || || |||||| |||||||||||||||||||    
T  24270092 ctcctccaagatccattgggccacctgctatca 24270060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 69 - 216
Target Start/End: Complemental strand, 38731928 - 38731780
Alignment:
Q  69 atgacctgataatgtgtttataagtgggaacaatcctcacttcataac-cggttttgtggggttgagttaggcccaaccatgatttttaagatgatatca 167  Q
    |||| |||| |||||||||||||||| ||||||||||||| ||| ||  || ||||||| ||||| ||||||| ||||||  |||| ||||||| |||||    
T  38731928 atgatctgacaatgtgtttataagtgagaacaatcctcacctcacaagtcgattttgtgaggttgtgttaggcacaaccaccatttctaagatgctatca 38731829  T
Q  168 gagcatcttcaagatctattgggccacctgctatcaaatttctgctatc 216  Q
     ||| ||||||| ||  |||| || |||||||||||  |||||||||||    
T  38731828 tagcctcttcaaaattcattgagctacctgctatcaggtttctgctatc 38731780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 69 - 147
Target Start/End: Complemental strand, 95356 - 95277
Alignment:
Q  69 atgacctgataatgtgtttataagtgggaacaatcctcacttcataa-ccggttttgtggggttgagttaggcccaacca 147  Q
    ||||||||| |||||||||||||||||| ||||||||||  ||| || ||||||||||||||||| ||||||||||||||    
T  95356 atgacctgacaatgtgtttataagtggggacaatcctcatctcacaagccggttttgtggggttgtgttaggcccaacca 95277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 73 - 203
Target Start/End: Original strand, 8098316 - 8098446
Alignment:
Q  73 cctgataatgtgtttataagtgggaacaatcctcacttcataa-ccggttttgtggggttgagttaggcccaaccatgatttttaagatgatatcagagc 171  Q
    ||||| ||| ||||||||||||||  |||||||||| ||| || ||||||||||||||||| |||| ||||||||| ||||| ||| ||| |||||||||    
T  8098316 cctgacaatttgtttataagtgggg-caatcctcacctcacaagccggttttgtggggttgtgttaagcccaaccacgatttctaatatggtatcagagc 8098414  T
Q  172 atcttcaagatctattgggccacctgctatca 203  Q
     |||||| |||   |||||||||||| |||||    
T  8098415 ctcttcacgattctttgggccacctgttatca 8098446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 73 - 203
Target Start/End: Complemental strand, 21210007 - 21209876
Alignment:
Q  73 cctgataatgtgtttataagtgggaacaatcctcacttcataa-ccggttttgtggggttgagttaggcccaaccatgatttttaagatgatatcagagc 171  Q
    ||||| ||| |||||||||||||| ||||| ||||| ||| || ||||||||||||||||| |||| ||||||||| ||||| ||| ||| ||| |||||    
T  21210007 cctgacaatttgtttataagtggggacaattctcacctcacaagccggttttgtggggttgtgttaagcccaaccacgatttctaatatggtattagagc 21209908  T
Q  172 atcttcaagatctattgggccacctgctatca 203  Q
     |||||| |||   |||||||||||| |||||    
T  21209907 ctcttcacgattctttgggccacctgttatca 21209876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 73 - 159
Target Start/End: Complemental strand, 41666843 - 41666756
Alignment:
Q  73 cctgataatgtgtttataagtgggaacaatcctcacttcataa-ccggttttgtggggttgagttaggcccaaccatgatttttaaga 159  Q
    ||||| ||||||||||||||||||  |||||||||| ||| || ||||||||||||||||| |||||||||||||| ||||| |||||    
T  41666843 cctgacaatgtgtttataagtgggggcaatcctcacctcacaagccggttttgtggggttgtgttaggcccaaccacgatttctaaga 41666756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 134 - 203
Target Start/End: Complemental strand, 95525 - 95456
Alignment:
Q  134 gttaggcccaaccatgatttttaagatgatatcagagcatcttcaagatctattgggccacctgctatca 203  Q
    |||||||||||||| ||||| ||||||| ||||||||| ||| ||||||| |||||||||||||||||||    
T  95525 gttaggcccaaccacgatttctaagatggtatcagagcctctccaagatccattgggccacctgctatca 95456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 73 - 159
Target Start/End: Original strand, 19705901 - 19705988
Alignment:
Q  73 cctgataatgtgtttataagtgggaacaatcctcacttcataa-ccggttttgtggggttgagttaggcccaaccatgatttttaaga 159  Q
    ||||| ||||||||||||||||||  |||||||||| | |||| |||||||||||| |||| |||||||||||||| ||||| |||||    
T  19705901 cctgacaatgtgtttataagtgggggcaatcctcaccttataagccggttttgtggagttgtgttaggcccaaccacgatttctaaga 19705988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 69 - 159
Target Start/End: Original strand, 28510085 - 28510176
Alignment:
Q  69 atgacctgataatgtgtttataagtgggaacaatcctcacttcataa-ccggttttgtggggttgagttaggcccaaccatgatttttaaga 159  Q
    ||||||||| ||||||||||||||||    |||||||||  |||||| ||||||||||||||||| |||||||||||||| ||||| |||||    
T  28510085 atgacctgacaatgtgtttataagtgaaggcaatcctcatctcataagccggttttgtggggttgtgttaggcccaaccacgatttctaaga 28510176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 74 - 171
Target Start/End: Complemental strand, 1564652 - 1564554
Alignment:
Q  74 ctgataatgtgtttataagtgggaacaatcctcacttcataac-cggttttgtggggttgagttaggcccaaccatgatttttaagatgatatcagagc 171  Q
    |||| |||||| |||||||||||  |||||||||| ||| ||  | |||||||||||||| ||||||| |||||| ||||| |||||||||||||||||    
T  1564652 ctgacaatgtgattataagtgggggcaatcctcacatcacaagacagttttgtggggttgtgttaggctcaaccacgatttctaagatgatatcagagc 1564554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 69 - 194
Target Start/End: Original strand, 20225035 - 20225161
Alignment:
Q  69 atgacctgataatgtgtttataagtgggaacaatcctcacttcataac-cggttttgtggggttgagttaggcccaaccatgatttttaagatgatatca 167  Q
    ||||||||| | ||||||||||| || | ||||||||||| ||| ||  || ||||||||||||| ||||||  |||||| ||||| ||| |||||||||    
T  20225035 atgacctgacagtgtgtttataaatgaggacaatcctcacctcacaagtcgattttgtggggttgtgttaggttcaaccacgatttctaaaatgatatca 20225134  T
Q  168 gagcatcttcaagatctattgggccac 194  Q
     ||| ||||||||||| |||| |||||    
T  20225135 tagcctcttcaagatccattgtgccac 20225161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 73 - 145
Target Start/End: Original strand, 42295577 - 42295650
Alignment:
Q  73 cctgataatgtgtttataagtgggaacaatcctcacttcataa-ccggttttgtggggttgagttaggcccaac 145  Q
    ||||||||| ||||||||||||||| |||||||||| ||| || |||||||||||| |||| ||||||||||||    
T  42295577 cctgataatttgtttataagtgggagcaatcctcacctcacaagccggttttgtggagttgtgttaggcccaac 42295650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 73 - 165
Target Start/End: Original strand, 15480555 - 15480650
Alignment:
Q  73 cctgataatgtgtttataagtggg--aacaatcctcacttcataa-ccggttttgtggggttgagttaggcccaaccatgatttttaagatgatat 165  Q
    ||||| || |||||||||||||||  | |||||||||| ||| || ||||||||||||||||| ||||||||||||||  |||| |||||||||||    
T  15480555 cctgacaacgtgtttataagtgggggatcaatcctcacctcacaagccggttttgtggggttgtgttaggcccaaccacaatttctaagatgatat 15480650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 69 - 143
Target Start/End: Complemental strand, 6413516 - 6413441
Alignment:
Q  69 atgacctgataatgtgtttataagtgggaacaatcctcacttcataa-ccggttttgtggggttgagttaggccca 143  Q
    ||||||||| ||||||||||||||||||  |||||||||| |||||| ||| ||||||||||||| ||||| ||||    
T  6413516 atgacctgacaatgtgtttataagtgggggcaatcctcacctcataagccgattttgtggggttgtgttagaccca 6413441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 85 - 202
Target Start/End: Original strand, 13296683 - 13296800
Alignment:
Q  85 tttataagtgggaacaatcctcacttcataa-ccggttttgtggggttgagttaggcccaaccatgatttttaagatgatatcagagcatcttcaagatc 183  Q
    ||||||||||||  |||||||||| ||| || || |||||||||| ||| |||||||||||||| ||||| ||||||| |||| |||| |||||| |||     
T  13296683 tttataagtgggggcaatcctcacctcacaagccagttttgtggg-ttgtgttaggcccaaccacgatttctaagatggtatcggagcctcttcacgatt 13296781  T
Q  184 tattgggccacctgctatc 202  Q
      |||||||||||| ||||    
T  13296782 ctttgggccacctgttatc 13296800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 140 - 218
Target Start/End: Complemental strand, 16704736 - 16704658
Alignment:
Q  140 cccaaccatgatttttaagatgatatcagagcatcttcaagatctattgggccacctgctatcaaatttctgctatcgg 218  Q
    |||||||||||||| ||| ||||||||||||| ||||||| |||  |||||| |||||||||||  |||| ||||||||    
T  16704736 cccaaccatgatttctaaaatgatatcagagcttcttcaatatcctttgggctacctgctatcatgtttcagctatcgg 16704658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 74 - 147
Target Start/End: Complemental strand, 18333550 - 18333476
Alignment:
Q  74 ctgataatgtgtttataagtgggaacaatcctcacttcataa-ccggttttgtggggttgagttaggcccaacca 147  Q
    |||| ||||||||||||||||||   ||||||||| ||| || ||||||||||||||||| ||||||||||||||    
T  18333550 ctgacaatgtgtttataagtgggggtaatcctcacctcacaagccggttttgtggggttgtgttaggcccaacca 18333476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 145 - 215
Target Start/End: Complemental strand, 20510889 - 20510819
Alignment:
Q  145 ccatgatttttaagatgatatcagagcatcttcaagatctattgggccacctgctatcaaatttctgctat 215  Q
    ||||||||||||||||| ||||||||| ||| ||||||| | ||||| |||||||||||  ||||||||||    
T  20510889 ccatgatttttaagatggtatcagagcgtctccaagatccactgggctacctgctatcaggtttctgctat 20510819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 74 - 178
Target Start/End: Complemental strand, 24487730 - 24487625
Alignment:
Q  74 ctgataatgtgtttataagtgggaacaatcctcacttcataa-ccggttttgtggggttgagttaggcccaaccatgatttttaagatgatatcagagca 172  Q
    |||| ||| ||||||||||||||   ||||||||| ||| || ||||||||||| ||||| |||| ||||||||| ||||| ||| ||| |||||||||     
T  24487730 ctgaaaatatgtttataagtgggggtaatcctcacctcacaagccggttttgtgaggttgtgttaagcccaaccacgatttctaatatggtatcagagcc 24487631  T
Q  173 tcttca 178  Q
    ||||||    
T  24487630 tcttca 24487625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 73 - 153
Target Start/End: Complemental strand, 27133079 - 27132998
Alignment:
Q  73 cctgataatgtgtttataagtgggaacaatcctcacttcataa-ccggttttgtggggttgagttaggcccaaccatgattt 153  Q
    ||||| ||| |||||||||||| |  |||||||||| ||| || ||||||||||||||||| |||||||||||||| |||||    
T  27133079 cctgacaatttgtttataagtgagggcaatcctcacctcacaagccggttttgtggggttgtgttaggcccaaccacgattt 27132998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 68 - 202
Target Start/End: Original strand, 6637595 - 6637731
Alignment:
Q  68 aatgacctgataatgtgtttataagtgggaacaatcctcacttcataaccggttttgtggggttgagttaggcccaaccatgattt-ttaagatgatatc 166  Q
    |||| ||||| ||||||||||||||||||   ||||||||| ||| || | | |||| |||||||  ||| ||||||||| ||||| |||||||| ||||    
T  6637595 aatggcctgacaatgtgtttataagtgggggtaatcctcacctcacaagccggtttgcggggttgtattaagcccaaccacgatttattaagatggtatc 6637694  T
Q  167 agagcat-cttcaagatctattgggccacctgctatc 202  Q
    ||||| | || || ||||| ||||||||| |||||||    
T  6637695 agagcctcctccacgatctgttgggccacttgctatc 6637731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 83 - 153
Target Start/End: Original strand, 7607602 - 7607673
Alignment:
Q  83 tgtttataagtgggaacaatcctcacttcataa-ccggttttgtggggttgagttaggcccaaccatgattt 153  Q
    |||||||||||||  |||||| |||| ||| || |||||||||||| |||| ||||||||||||||||||||    
T  7607602 tgtttataagtggagacaatcttcacctcacaagccggttttgtggagttgtgttaggcccaaccatgattt 7607673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 69 - 147
Target Start/End: Complemental strand, 17352525 - 17352446
Alignment:
Q  69 atgacctgataatgtgtttataagtgggaacaatcctcacttcataa-ccggttttgtggggttgagttaggcccaacca 147  Q
    ||||||||| ||||||||||||||||||  ||||| |||| ||| || ||||||||||| ||||| ||||||| ||||||    
T  17352525 atgacctgacaatgtgtttataagtgggggcaatcatcacctcacaagccggttttgtgaggttgcgttaggctcaacca 17352446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 90 - 160
Target Start/End: Complemental strand, 25258163 - 25258092
Alignment:
Q  90 aagtgggaacaatcctcacttcataa-ccggttttgtggggttgagttaggcccaaccatgatttttaagat 160  Q
    |||||||  |||||||||| ||| || ||||||||||||||||| |||||||||||||| ||||| ||||||    
T  25258163 aagtgggggcaatcctcacctcacaagccggttttgtggggttgtgttaggcccaaccacgatttctaagat 25258092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 90 - 160
Target Start/End: Complemental strand, 25321953 - 25321882
Alignment:
Q  90 aagtgggaacaatcctcacttcataa-ccggttttgtggggttgagttaggcccaaccatgatttttaagat 160  Q
    |||||||  |||||||||| ||| || ||||||||||||||||| |||||||||||||| ||||| ||||||    
T  25321953 aagtgggggcaatcctcacctcacaagccggttttgtggggttgtgttaggcccaaccacgatttctaagat 25321882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 85 - 203
Target Start/End: Complemental strand, 29909795 - 29909676
Alignment:
Q  85 tttataagtgggaacaatcctcacttcataa-ccggttttgtggggttgagttaggcccaaccatgatttttaagatgatatcagagcatcttcaagatc 183  Q
    |||||||||||   |||||||||| ||| || |||||||||||| |||| ||||||||||||||  |||| ||| |||| |||||||| |||||| |||     
T  29909795 tttataagtggaggcaatcctcacctcacaagccggttttgtggagttgtgttaggcccaaccaccatttctaatatgacatcagagcctcttcacgatt 29909696  T
Q  184 tattgggccacctgctatca 203  Q
      ||| |||||||| |||||    
T  29909695 ctttgagccacctgttatca 29909676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 79 - 202
Target Start/End: Complemental strand, 30770345 - 30770226
Alignment:
Q  79 aatgtgtttataagtgggaacaatcctcacttcataacc-ggttttgtggggttgagttaggcccaaccatgatttttaagatgatatcagagcatcttc 177  Q
    ||||||||||||||||||  |||||||||| |||||| | ||||||||  || ||||| |||||| |    |||||  |||||| ||||||||| ||| |    
T  30770345 aatgtgtttataagtgggggcaatcctcacctcataagctggttttgtaaggatgagtcaggcccca----gatttc-aagatggtatcagagcctctcc 30770251  T
Q  178 aagatctattgggccacctgctatc 202  Q
    |||||| ||||||||||||||||||    
T  30770250 aagatccattgggccacctgctatc 30770226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 74 - 160
Target Start/End: Original strand, 38976932 - 38977019
Alignment:
Q  74 ctgataatgtgtttataagtgggaacaatcctcacttca-taaccggttttgtggggttgagttaggcccaaccatgatttttaagat 160  Q
    |||| ||||||||||||||| || ||||||||||| |||  |||||||||||||| | || ||||||| |||||| ||||| ||||||    
T  38976932 ctgacaatgtgtttataagttgggacaatcctcacctcacaaaccggttttgtggaggtgtgttaggcacaaccacgatttctaagat 38977019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 82 - 147
Target Start/End: Original strand, 7369731 - 7369797
Alignment:
Q  82 gtgtttataagtgggaacaatcctcacttcataa-ccggttttgtggggttgagttaggcccaacca 147  Q
    |||||||||||||||  || ||||||| ||| || ||||||||||||||||| ||||||||||||||    
T  7369731 gtgtttataagtgggggcagtcctcacctcacaagccggttttgtggggttgtgttaggcccaacca 7369797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 118 - 203
Target Start/End: Complemental strand, 26137385 - 26137299
Alignment:
Q  118 ggttttgtggggttgagttaggcccaaccatgatttttaagatgatatcagagcat-cttcaagatctattgggccacctgctatca 203  Q
    ||||||||||| ||  |||||||||||||| ||||| |||| || ||||||||| | || |||||| | ||||||||||||||||||    
T  26137385 ggttttgtgggattatgttaggcccaaccacgatttctaaggtggtatcagagcctactccaagatttgttgggccacctgctatca 26137299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 74 - 147
Target Start/End: Complemental strand, 37782135 - 37782061
Alignment:
Q  74 ctgataatgtgtttataagtgggaacaatcctcacttcataacc-ggttttgtggggttgagttaggcccaacca 147  Q
    |||| ||||||||||||||||||  ||||| |||| ||| || | |||||||||| |||||||||||||||||||    
T  37782135 ctgacaatgtgtttataagtgggggcaatcatcacctcacaagctggttttgtggagttgagttaggcccaacca 37782061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 79 - 147
Target Start/End: Original strand, 9368834 - 9368903
Alignment:
Q  79 aatgtgtttataagtgggaacaatcctcacttcataa-ccggttttgtggggttgagttaggcccaacca 147  Q
    ||||||||||||||||||  |||| ||||||||| || ||| || |||||||||| ||||||||||||||    
T  9368834 aatgtgtttataagtgggggcaattctcacttcacaagccgattatgtggggttgtgttaggcccaacca 9368903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 117 - 170
Target Start/End: Complemental strand, 13701109 - 13701056
Alignment:
Q  117 cggttttgtggggttgagttaggcccaaccatgatttttaagatgatatcagag 170  Q
    |||||||||||||| | |||||||| ||||| ||||| ||||||||||||||||    
T  13701109 cggttttgtggggtcgtgttaggcctaaccacgatttctaagatgatatcagag 13701056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 117 - 220
Target Start/End: Complemental strand, 17423911 - 17423807
Alignment:
Q  117 cggttttgtggggttgagttaggcccaaccatgatttttaagatgatatcagagcatcttc-aagatctattgggccacctgctatcaaatttctgctat 215  Q
    |||||||||||||||  ||||| | |||||| || || ||||||| ||||| ||| ||||| ||||||| ||| |||||||||||||   |||| |||||    
T  17423911 cggttttgtggggttatgttagcctcaaccacgacttctaagatggtatcaaagcctcttcaaagatctgttgagccacctgctatccggtttccgctat 17423812  T
Q  216 cggac 220  Q
    |||||    
T  17423811 cggac 17423807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 73 - 160
Target Start/End: Complemental strand, 24346587 - 24346499
Alignment:
Q  73 cctgataatgtgtttataagtgggaacaatcctcacttcataa-ccggttttgtggggttgagttaggcccaaccatgatttttaagat 160  Q
    ||||| ||||||||||||||||||   ||||||||| ||| || |||||||| |||||||| ||||||| ||||||  |||| ||||||    
T  24346587 cctgacaatgtgtttataagtgggggtaatcctcacctcacaagccggttttatggggttgtgttaggctcaaccacaatttctaagat 24346499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 80 - 146
Target Start/End: Complemental strand, 170630 - 170563
Alignment:
Q  80 atgtgtttataagtgggaacaatcctcacttcataa-ccggttttgtggggttgagttaggcccaacc 146  Q
    |||||||||||||||||  || ||||||| ||| || ||||||||||| ||||| |||||||||||||    
T  170630 atgtgtttataagtgggggcagtcctcacctcacaagccggttttgtgaggttgtgttaggcccaacc 170563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 69 - 108
Target Start/End: Complemental strand, 3859398 - 3859359
Alignment:
Q  69 atgacctgataatgtgtttataagtgggaacaatcctcac 108  Q
    |||||||||||||||||||||||||| | |||||||||||    
T  3859398 atgacctgataatgtgtttataagtgaggacaatcctcac 3859359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 74 - 160
Target Start/End: Original strand, 13296891 - 13296978
Alignment:
Q  74 ctgataatgtgtttataagtgggaacaatcctcacttcataa-ccggttttgtggggttgagttaggcccaaccatgatttttaagat 160  Q
    |||| ||| ||||||||||||||  ||| |||||| ||| || ||||||||||||| ||| ||||| |||||||| ||||| ||||||    
T  13296891 ctgacaatttgtttataagtgggggcaaccctcacctcacaaaccggttttgtgggattgtgttagacccaaccacgatttctaagat 13296978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 175 - 218
Target Start/End: Original strand, 15590039 - 15590082
Alignment:
Q  175 ttcaagatctattgggccacctgctatcaaatttctgctatcgg 218  Q
    |||||||| ||||||||||||||||||||| |||| ||||||||    
T  15590039 ttcaagatttattgggccacctgctatcaagtttccgctatcgg 15590082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 83 - 197
Target Start/End: Original strand, 19522095 - 19522210
Alignment:
Q  83 tgtttataagtgggaacaatcctcacttcataa-ccggttttgtggggttgagttaggcccaaccatgatttttaagatgatatcagagcatcttcaaga 181  Q
    ||||||| ||||||  |||||||||| ||| || |||||||||||||||||  || | |||||||| ||||| ||| ||| ||||||| | |||||| ||    
T  19522095 tgtttattagtgggggcaatcctcacctcacaagccggttttgtggggttgtatttgacccaaccacgatttctaatatggtatcagaacctcttcacga 19522194  T
Q  182 tctattgggccacctg 197  Q
    |   ||||||||||||    
T  19522195 ttatttgggccacctg 19522210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 73 - 159
Target Start/End: Complemental strand, 20510728 - 20510641
Alignment:
Q  73 cctgataatgtgtttataagtgggaacaatcctcacttcataa-ccggttttgtggggttgagttaggcccaaccatgatttttaaga 159  Q
    ||||| ||| ||||||||||||||  |||||||||| ||| || || ||||||||| |||| ||||||||||| || ||||| |||||    
T  20510728 cctgacaatatgtttataagtgggggcaatcctcacctcaaaaaccagttttgtggagttgtgttaggcccaaacacgatttctaaga 20510641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 116 - 182
Target Start/End: Original strand, 14314655 - 14314721
Alignment:
Q  116 ccggttttgtggggttgagttaggcccaaccatgatttttaagatgatatcagagcatcttcaagat 182  Q
    ||||||||||||||||| ||||||||||| ||  | ||||||||||  |||||||| | ||||||||    
T  14314655 ccggttttgtggggttgtgttaggcccaatcacaaattttaagatggaatcagagcctattcaagat 14314721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 79 - 160
Target Start/End: Original strand, 21306891 - 21306973
Alignment:
Q  79 aatgtgtttataagtgggaacaatcctcacttcataa-ccggttttgtggggttgagttaggcccaaccatgatttttaagat 160  Q
    ||||| ||||||||||||  |||||||||| ||| || ||||| ||||||| ||| ||||| |||||||| ||||| ||||||    
T  21306891 aatgtatttataagtgggggcaatcctcacctcacaagccggtattgtgggattgtgttagacccaaccacgatttctaagat 21306973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 79 - 160
Target Start/End: Original strand, 21314729 - 21314811
Alignment:
Q  79 aatgtgtttataagtgggaacaatcctcacttcataa-ccggttttgtggggttgagttaggcccaaccatgatttttaagat 160  Q
    ||||| ||||||||||||  |||||||||| ||| || ||||| ||||||| ||| ||||| |||||||| ||||| ||||||    
T  21314729 aatgtatttataagtgggggcaatcctcacctcacaagccggtattgtgggattgtgttagacccaaccacgatttctaagat 21314811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 73 - 142
Target Start/End: Complemental strand, 30758385 - 30758315
Alignment:
Q  73 cctgataatgtgtttataagtgggaacaatcctcacttcataa-ccggttttgtggggttgagttaggccc 142  Q
    ||||| |||||||||||||| |||  |||||||||| |||||| ||||||||||  || ||||||||||||    
T  30758385 cctgacaatgtgtttataagggggggcaatcctcacctcataagccggttttgtaaggatgagttaggccc 30758315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 69 - 142
Target Start/End: Complemental strand, 30770139 - 30770065
Alignment:
Q  69 atgacctgataatgtgtttataagtgggaacaatcctcacttcataa-ccggttttgtggggttgagttaggccc 142  Q
    ||||||||| ||||| |||| |||||||  |||||||||| |||||| ||||||||||  || ||||||||||||    
T  30770139 atgacctgacaatgtttttaaaagtgggggcaatcctcacctcataaaccggttttgtaaggatgagttaggccc 30770065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #63
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 74 - 147
Target Start/End: Complemental strand, 37657022 - 37656948
Alignment:
Q  74 ctgataatgtgtttataagtgggaacaatcctcacttcataac-cggttttgtggggttgagttaggcccaacca 147  Q
    |||| ||||||||||||||||||   |||||| || ||| ||  ||||||||||||||| |||||||||||||||    
T  37657022 ctgacaatgtgtttataagtgggggtaatccttacctcacaagtcggttttgtggggttaagttaggcccaacca 37656948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #64
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 80 - 144
Target Start/End: Original strand, 60092 - 60157
Alignment:
Q  80 atgtgtttataagtgggaacaatcctcacttcataa-ccggttttgtggggttgagttaggcccaa 144  Q
    |||||||||||||||||  |||||||||| ||| || ||||||||||||||||  ||||| |||||    
T  60092 atgtgtttataagtgggggcaatcctcacctcacaagccggttttgtggggttatgttagacccaa 60157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #65
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 83 - 147
Target Start/End: Original strand, 8287810 - 8287874
Alignment:
Q  83 tgtttataagtgggaacaatcctcacttcataa-ccggttttgtggggttgagttaggcccaacca 147  Q
    ||||||||||||||  |||||| ||| ||| || ||||||||||||||||| ||||||||||||||    
T  8287810 tgtttataagtgggg-caatccccacctcacaagccggttttgtggggttgtgttaggcccaacca 8287874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #66
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 69 - 153
Target Start/End: Complemental strand, 16707115 - 16707030
Alignment:
Q  69 atgacctgataatgtgtttataagtgggaacaatcctcacttcataa-ccggttttgtggggttgagttaggcccaaccatgattt 153  Q
    |||||||||  |||||||||||||||||  ||||||| || ||| || | |||||||  |||||| |||||||||||||| |||||    
T  16707115 atgacctgaacatgtgtttataagtgggggcaatcctaacctcacaagctggttttgcagggttgtgttaggcccaaccacgattt 16707030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #67
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 80 - 144
Target Start/End: Complemental strand, 17899539 - 17899474
Alignment:
Q  80 atgtgtttataagtgggaacaatcctcacttcat-aaccggttttgtggggttgagttaggcccaa 144  Q
    |||||||||||||||||  |||||||||| |||| | ||| ||||||| || ||||||||||||||    
T  17899539 atgtgtttataagtgggggcaatcctcacctcatgagccgattttgtgaggatgagttaggcccaa 17899474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #68
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 73 - 161
Target Start/End: Original strand, 43117880 - 43117969
Alignment:
Q  73 cctgataatgtgtttataagtgggaacaatcctcacttcataa-ccggttttgtggggttgagttaggcccaaccatgatttttaagatg 161  Q
    ||||| ||||||||||||| || |  |||||||||  ||| || |||||||| | |||||| |||||||||||| | |||||||||||||    
T  43117880 cctgacaatgtgtttataaatgagggcaatcctcatctcacaagccggttttatagggttgtgttaggcccaacaacgatttttaagatg 43117969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #69
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 119 - 223
Target Start/End: Complemental strand, 7134048 - 7133945
Alignment:
Q  119 gttttgtggggttgagttaggcccaaccatgatttttaagatgatatcagagcatcttcaagatctattgggccacctgctatcaaatttctgctatcgg 218  Q
    |||||||||||||| | |||||| |||||  |||| ||| ||||||||||||| ||| |||||||||   |  ||||||||||||| |||| || ||| |    
T  7134048 gttttgtggggttgtgctaggcc-aaccacaatttctaatatgatatcagagcctctccaagatctaccagatcacctgctatcaagtttccgcaatcag 7133950  T
Q  219 accac 223  Q
    |||||    
T  7133949 accac 7133945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #70
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 163 - 203
Target Start/End: Complemental strand, 8081344 - 8081304
Alignment:
Q  163 tatcagagcatcttcaagatctattgggccacctgctatca 203  Q
    ||||||||| ||| ||||||| |||||||||||||||||||    
T  8081344 tatcagagcttctccaagatcgattgggccacctgctatca 8081304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #71
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 73 - 160
Target Start/End: Complemental strand, 24269956 - 24269869
Alignment:
Q  73 cctgataatgtgtttataagtgggaacaatcctcacttcataa-ccggttttgtggggttgagttaggcccaaccatgatttttaagat 160  Q
    ||||| ||||||||||||||||||   ||||||||| ||| || |||||||| |||||||| ||||||| ||||||  |||| ||||||    
T  24269956 cctgacaatgtgtttataagtggg-gtaatcctcacctcacaagccggttttatggggttgtgttaggctcaaccacaatttctaagat 24269869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 72; Significance: 7e-33; HSPs: 78)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 69 - 223
Target Start/End: Complemental strand, 22231398 - 22231243
Alignment:
Q  69 atgacctgataatgtgtttataagtgggaacaatcctcacttcataa-ccggttttgtggggttgagttaggcccaaccatgatttttaagatgatatca 167  Q
    ||||||||| ||| | ||||||||||||  |||||||||| ||| || ||||||||||||||||| |||||||||||||| ||||| ||||||| |||||    
T  22231398 atgacctgagaatatatttataagtgggggcaatcctcacctcacaagccggttttgtggggttgtgttaggcccaaccacgatttctaagatggtatca 22231299  T
Q  168 gagcatcttcaagatctattgggccacctgctatcaaatttctgctatcggaccac 223  Q
    |||| ||| ||| ||| |||||||||||||||||||  |||| |||||||| ||||    
T  22231298 gagcctctccaaaatccattgggccacctgctatcaggtttccgctatcgggccac 22231243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 73 - 223
Target Start/End: Complemental strand, 40717527 - 40717376
Alignment:
Q  73 cctgataatgtgtttataagtgggaacaatcctcacttcataac-cggttttgtggggttgagttaggcccaaccatgatttttaagatgatatcagagc 171  Q
    ||||||||| ||||||||||||||  |||||||||| ||| ||  |||||||||||||||| |||||||||||||| ||||| ||||||| |||||||||    
T  40717527 cctgataatttgtttataagtgggggcaatcctcacctcaaaagtcggttttgtggggttgtgttaggcccaaccacgatttctaagatggtatcagagc 40717428  T
Q  172 atcttcaagatctattgggccacctgctatcaaatttctgctatcggaccac 223  Q
     ||| ||| ||| |||||||||||||| ||||  |||| |||||||||||||    
T  40717427 ctctccaatatccattgggccacctgccatcaggtttccgctatcggaccac 40717376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 73 - 218
Target Start/End: Complemental strand, 34358116 - 34357970
Alignment:
Q  73 cctgataatgtgtttataagtgggaacaatcctcacttcataa-ccggttttgtggggttgagttaggcccaaccatgatttttaagatgatatcagagc 171  Q
    ||||| ||||||||||||| ||||  |||||||||| ||| || ||||||||||||||||| ||||||| ||| || ||||| |||||||||||||||||    
T  34358116 cctgacaatgtgtttataaatgggggcaatcctcacatcagaagccggttttgtggggttgtgttaggctcaaacacgatttctaagatgatatcagagc 34358017  T
Q  172 atcttcaagatctattgggccacctgctatcaaatttctgctatcgg 218  Q
     ||| |||||||||||||||||| || |||||  |||| ||||||||    
T  34358016 ctctacaagatctattgggccacttgttatcaggtttccgctatcgg 34357970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 69 - 223
Target Start/End: Original strand, 52559561 - 52559718
Alignment:
Q  69 atgacctgataatgtgtttataagtgggaacaatcctcacttcataa-ccggttttgtggggttgagttaggcccaaccatgatttttaagatgatatca 167  Q
    ||||||||| ||||||||||||||||||  ||||| |||| ||| || ||||||||||||||||| |||||||||||||||||||| ||||||  |||||    
T  52559561 atgacctgacaatgtgtttataagtgggggcaatcatcacctcacaagccggttttgtggggttgtgttaggcccaaccatgatttctaagatagtatca 52559660  T
Q  168 gagcatcttc-aagat-ctattgggccacctgctatcaaatttctgctatcggaccac 223  Q
    |||| || || ||||| |  ||||||||||||||||||| ||| || |||||| ||||    
T  52559661 gagcctcctcaaagatccgtttgggccacctgctatcaagtttatgttatcgggccac 52559718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 73 - 203
Target Start/End: Original strand, 35788657 - 35788789
Alignment:
Q  73 cctgataatgtgtttataagtgggaacaatcctcacttcataa-ccggttttgtggggttgagttaggcccaaccatgatttttaagatgatatcagagc 171  Q
    ||||| ||||||||||||||||||  |||||||||| ||| || |||||||| |||||||| |||||||||||||| ||||| ||||||| |||||||||    
T  35788657 cctgacaatgtgtttataagtgggggcaatcctcacctcacaagccggttttatggggttgtgttaggcccaaccacgatttctaagatggtatcagagc 35788756  T
Q  172 at-cttcaagatctattgggccacctgctatca 203  Q
     | || |||||||  ||||||||||||||||||    
T  35788757 ctcctccaagatccgttgggccacctgctatca 35788789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 73 - 203
Target Start/End: Complemental strand, 50543653 - 50543520
Alignment:
Q  73 cctgataatgtgtttataagtgggaacaatcctcacttcataa-ccggttttgtggggttgagttaggcccaaccatgatttttaagatgatatcagagc 171  Q
    ||||| ||||||| ||||||||||  |||||||||| ||| || |||||||||||| |||| |||||||||||||| ||||| |||||||||||||||||    
T  50543653 cctgacaatgtgtgtataagtgggggcaatcctcacctcacaagccggttttgtggagttgtgttaggcccaaccacgatttctaagatgatatcagagc 50543554  T
Q  172 atcttcaagatc--tattgggccacctgctatca 203  Q
     ||| |||||||  |||| | |||||||||||||    
T  50543553 ctctccaagatccatatttgaccacctgctatca 50543520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 80 - 203
Target Start/End: Original strand, 7926333 - 7926457
Alignment:
Q  80 atgtgtttataagtgggaacaatcctcacttcataa-ccggttttgtggggttgagttaggcccaaccatgatttttaagatgatatcagagcatcttca 178  Q
    |||||||||||||||||  || |||||||  || || |||||||||||||| || |||||||||||||| |||||  |||||| ||||||||| ||| ||    
T  7926333 atgtgtttataagtgggggcattcctcacaacacaagccggttttgtggggctgtgttaggcccaaccaagatttcgaagatggtatcagagcctctcca 7926432  T
Q  179 agatctattgggccacctgctatca 203  Q
    ||||| |||||||||||||||||||    
T  7926433 agatccattgggccacctgctatca 7926457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 85 - 203
Target Start/End: Complemental strand, 12869337 - 12869218
Alignment:
Q  85 tttataagtgggaacaatcctcacttcataac-cggttttgtggggttgagttaggcccaaccatgatttttaagatgatatcagagcatcttcaagatc 183  Q
    |||||||||||| ||||||||||| ||||||  |||||||||||||||| |||||||||||||| ||||| ||||||| ||||||||  |||||| |||     
T  12869337 tttataagtggggacaatcctcacctcataagacggttttgtggggttgtgttaggcccaaccacgatttctaagatggtatcagagtctcttcacgatt 12869238  T
Q  184 tattgggccacctgctatca 203  Q
    | |||| ||||||| |||||    
T  12869237 ttttggcccacctgttatca 12869218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 69 - 223
Target Start/End: Complemental strand, 35797067 - 35796912
Alignment:
Q  69 atgacctgataatgtgtttataagtgggaacaatcctcacttcataa-ccggttttgtggggttgagttaggcccaaccatgatttttaagatgatatca 167  Q
    ||||| ||| ||| ||||||||||||||  |||||||||| ||| || || |||||||||||||| |||| ||||||| |  |||| ||||||| |||||    
T  35797067 atgacatgacaatatgtttataagtgggggcaatcctcacctcacaaaccagttttgtggggttgtgttaagcccaactaccatttctaagatggtatca 35796968  T
Q  168 gagcatcttcaagatctattgggccacctgctatcaaatttctgctatcggaccac 223  Q
    |||| ||||| ||||| ||||| | |||||||||||  |||| |||||||| ||||    
T  35796967 gagcctcttcgagatccattggactacctgctatcaggtttccgctatcgggccac 35796912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 70 - 203
Target Start/End: Original strand, 1518159 - 1518293
Alignment:
Q  70 tgacctgataatgtgtttataagtgggaacaatcctcacttcataa-ccggttttgtggggttgagttaggcccaaccatgatttttaagatgatatcag 168  Q
    |||||||| ||| ||||||||||||||  |||||||||  ||| || ||||||||||||||||| |||||||| ||||| ||||| ||||||| ||||||    
T  1518159 tgacctgacaatttgtttataagtgggggcaatcctcagctcacaagccggttttgtggggttgtgttaggcctaaccacgatttctaagatggtatcag 1518258  T
Q  169 agcatcttcaagatctattgggccacctgctatca 203  Q
    ||| | |||| |||   |||||||||||| |||||    
T  1518259 agccttttcacgattctttgggccacctgttatca 1518293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 73 - 218
Target Start/End: Complemental strand, 35819214 - 35819068
Alignment:
Q  73 cctgataatgtgtttataagtgggaacaatcctcacttcataa-ccggttttgtggggttgagttaggcccaaccatgatttttaagatgatatcagagc 171  Q
    ||||| ||| |||||||| |||||  |||||||| | ||| || || |||||||| ||||| |||||||||||||| |||||||||||||  |||||||     
T  35819214 cctgacaatttgtttatatgtgggggcaatcctcgcctcacaagccagttttgtgaggttgtgttaggcccaaccacgatttttaagatggcatcagagt 35819115  T
Q  172 atcttcaagatctattgggccacctgctatcaaatttctgctatcgg 218  Q
     |||  |||||| |||||||||||||||||||  |||| ||||||||    
T  35819114 ctctctaagatccattgggccacctgctatcaggtttccgctatcgg 35819068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 73 - 218
Target Start/End: Complemental strand, 53815015 - 53814869
Alignment:
Q  73 cctgataatgtgtttataagtgggaacaatcctcacttcataac-cggttttgtggggttgagttaggcccaaccatgatttttaagatgatatcagagc 171  Q
    ||||| ||| ||||||||||||||  |||||||||| ||| ||  |||||||||||||||| |||| ||||||||| ||||| ||| ||| |||||||||    
T  53815015 cctgacaatttgtttataagtgggggcaatcctcacctcacaagtcggttttgtggggttgtgttaagcccaaccacgatttctaatatggtatcagagc 53814916  T
Q  172 atcttcaagatctattgggccacctgctatcaaatttctgctatcgg 218  Q
     |||||| |||   |||||||||||| |||||  |||||| ||||||    
T  53814915 ctcttcacgattctttgggccacctgttatcaggtttctgttatcgg 53814869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 134 - 223
Target Start/End: Complemental strand, 4905760 - 4905671
Alignment:
Q  134 gttaggcccaaccatgatttttaagatgatatcagagcatcttcaagatctattgggccacctgctatcaaatttctgctatcggaccac 223  Q
    ||||||| |||||||||||| ||||||||||||||||| ||| |||| || ||||||||||||||||| |  ||||||||||||| ||||    
T  4905760 gttaggctcaaccatgatttctaagatgatatcagagcctctccaagctccattgggccacctgctattaggtttctgctatcgggccac 4905671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 73 - 201
Target Start/End: Complemental strand, 11036832 - 11036703
Alignment:
Q  73 cctgataatgtgtttataagtgggaacaatcctcacttcataa-ccggttttgtggggttgagttaggcccaaccatgatttttaagatgatatcagagc 171  Q
    ||||| ||||||||||||||||||  |||||||||| ||| || ||| || |||||||||| |||||||| |||||  |||||||||||| |||||||||    
T  11036832 cctgacaatgtgtttataagtgggggcaatcctcacctcacaagccgattgtgtggggttgtgttaggcctaaccacaatttttaagatggtatcagagc 11036733  T
Q  172 atcttcaagatctattgggccacctgctat 201  Q
      ||  |||||| |||||||||||| ||||    
T  11036732 cactctaagatccattgggccacctactat 11036703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 74 - 204
Target Start/End: Original strand, 5846145 - 5846276
Alignment:
Q  74 ctgataatgtgtttataagtgggaacaatcctcacttcataa-ccggttttgtggggttgagttaggcccaaccatgatttttaagatgatatcagagca 172  Q
    |||| ||| ||||||||||||||  |||||||||| |||||| ||||||||||||||||| ||||||| |||||| ||||| ||| ||| ||||| | |     
T  5846145 ctgacaatttgtttataagtgggggcaatcctcacctcataagccggttttgtggggttgcgttaggctcaaccacgatttctaatatggtatcaaaacc 5846244  T
Q  173 tcttcaagatctattgggccacctgctatcaa 204  Q
    |||||| |||   |||||||||||| ||||||    
T  5846245 tcttcacgattctttgggccacctgttatcaa 5846276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 120 - 223
Target Start/End: Complemental strand, 36686179 - 36686076
Alignment:
Q  120 ttttgtggggttgagttaggcccaaccatgatttttaagatgatatcagagcatcttcaagatctattgggccacctgctatcaaatttctgctatcgga 219  Q
    ||||||||| ||| |||| ||||||||||||||||||||||  ||| ||||| ||||||||||  | |||||||||||||||||  |||| ||||||||     
T  36686179 ttttgtgggattgtgttatgcccaaccatgatttttaagatagtataagagcctcttcaagattcaatgggccacctgctatcaggtttccgctatcggg 36686080  T
Q  220 ccac 223  Q
    ||||    
T  36686079 ccac 36686076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 73 - 171
Target Start/End: Complemental strand, 53828609 - 53828510
Alignment:
Q  73 cctgataatgtgtttataagtgggaacaatcctcacttcataa-ccggttttgtggggttgagttaggcccaaccatgatttttaagatgatatcagagc 171  Q
    ||||| ||| ||||||||||||||  |||||||||| |||||| ||| ||||||||||||| ||||||||||||||  |||| ||||||| |||||||||    
T  53828609 cctgacaatttgtttataagtgggggcaatcctcacctcataagccgattttgtggggttgtgttaggcccaaccacaatttctaagatggtatcagagc 53828510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 71 - 223
Target Start/End: Complemental strand, 30566122 - 30565968
Alignment:
Q  71 gacctgataatgtgtttataagtgggaacaatcctcacttcataa-ccggttttgtggggttgagttaggcccaaccatgatttttaagatgatatcaga 169  Q
    ||||||| ||||||||||||||||||| |||| ||||| |||||| || ||||||| || ||| |||| ||||||||| | ||| | ||||| ||| |||    
T  30566122 gacctgacaatgtgtttataagtgggagcaattctcacatcataagccagttttgtaggtttgtgttaagcccaaccacgttttcttagatggtatgaga 30566023  T
Q  170 gcatcttc-aagatctattgggccacctgctatcaaatttctgctatcggaccac 223  Q
    || || || |||||| ||||| |||| ||||||||| |||| |||||||| ||||    
T  30566022 gcctcctctaagatccattggaccacttgctatcaagtttcggctatcgggccac 30565968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 82 - 171
Target Start/End: Complemental strand, 35609788 - 35609698
Alignment:
Q  82 gtgtttataagtgggaacaatcctcacttcataa-ccggttttgtggggttgagttaggcccaaccatgatttttaagatgatatcagagc 171  Q
    |||||||||||||||  |||||||||| ||| || ||||||||||||||||| || || |||||||||||||| ||||||| |||||||||    
T  35609788 gtgtttataagtggggccaatcctcacctcacaagccggttttgtggggttgtgtaagacccaaccatgatttctaagatggtatcagagc 35609698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 74 - 171
Target Start/End: Complemental strand, 50543415 - 50543317
Alignment:
Q  74 ctgataatgtgtttataagtgggaacaatcctcacttcataa-ccggttttgtggggttgagttaggcccaaccatgatttttaagatgatatcagagc 171  Q
    |||| ||||||| ||||||||||  ||||||||||  || || ||||||||||||||||| |||||||||||||| ||||| ||||||| |||||||||    
T  50543415 ctgacaatgtgtgtataagtgggggcaatcctcaccccacaagccggttttgtggggttgtgttaggcccaaccacgatttctaagatgttatcagagc 50543317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 45 - 159
Target Start/End: Original strand, 22863441 - 22863559
Alignment:
Q  45 tgttaagagtctcacatc---ctgataatgacctgataatgtgtttataagtgggaacaatcctcacttcataa-ccggttttgtggggttgagttaggc 140  Q
    ||||||||||||||||||   | ||  ||| ||||| ||||||||||||||||||  ||||||||||  || || ||||||||||||||||| |||||||    
T  22863441 tgttaagagtctcacatcggacagaagatggcctgacaatgtgtttataagtgggggcaatcctcaccccacaagccggttttgtggggttgtgttaggc 22863540  T
Q  141 ccaaccatgatttttaaga 159  Q
    ||||||| ||||| |||||    
T  22863541 ccaaccacgatttctaaga 22863559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 116 - 223
Target Start/End: Original strand, 4645684 - 4645791
Alignment:
Q  116 ccggttttgtggggttgagttaggcccaaccatgatttttaagatgatatcagagcatcttcaagatctattgggccacctgctatcaaatttctgctat 215  Q
    ||||||||||||| ||| ||||| | |||||||||||| ||||||  ||||||||| |||  |||||| |||||| ||||||||||||  |||| |||||    
T  4645684 ccggttttgtgggattgtgttagactcaaccatgatttataagatagtatcagagcctctcaaagatccattgggtcacctgctatcaggtttccgctat 4645783  T
Q  216 cggaccac 223  Q
    ||| ||||    
T  4645784 cgggccac 4645791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 114 - 201
Target Start/End: Complemental strand, 6666679 - 6666592
Alignment:
Q  114 aaccggttttgtggggttgagttaggcccaaccatgatttttaagatgatatcagagcatcttcaagatctattgggccacctgctat 201  Q
    ||||||||||||||| |||  ||||||||||||| ||||| ||||||| ||| ||| | ||| |||||||| ||||||||||||||||    
T  6666679 aaccggttttgtgggattgttttaggcccaaccacgatttctaagatggtattagaacctctacaagatctgttgggccacctgctat 6666592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 73 - 171
Target Start/End: Original strand, 21498352 - 21498451
Alignment:
Q  73 cctgataatgtgtttataagtgggaacaatcctcacttcataa-ccggttttgtggggttgagttaggcccaaccatgatttttaagatgatatcagagc 171  Q
    ||||| ||| ||||||||||||||  |||||||||| ||| || ||||||||||||||||  |||||||||||||| ||||| ||| ||| |||||||||    
T  21498352 cctgacaatttgtttataagtgggggcaatcctcacctcacaagccggttttgtggggttatgttaggcccaaccacgatttctaatatggtatcagagc 21498451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 73 - 159
Target Start/End: Complemental strand, 22231159 - 22231072
Alignment:
Q  73 cctgataatgtgtttataagtgggaacaatcctcacttcataa-ccggttttgtggggttgagttaggcccaaccatgatttttaaga 159  Q
    ||||| |||||||||||||||||| ||||||||||| ||| || |||||||||||||||||  ||||| ||||||| ||||| |||||    
T  22231159 cctgacaatgtgtttataagtggggacaatcctcacctcacaagccggttttgtggggttgtattaggtccaaccacgatttctaaga 22231072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 73 - 159
Target Start/End: Complemental strand, 22845533 - 22845446
Alignment:
Q  73 cctgataatgtgtttataagtgggaacaatcctcacttcataa-ccggttttgtggggttgagttaggcccaaccatgatttttaaga 159  Q
    ||||| ||||||||||||||||||   ||||||||| ||| || ||||||||||||||||| |||||||||||||| ||||| |||||    
T  22845533 cctgacaatgtgtttataagtgggggtaatcctcacctcacaagccggttttgtggggttgtgttaggcccaaccacgatttctaaga 22845446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 73 - 159
Target Start/End: Original strand, 35788892 - 35788979
Alignment:
Q  73 cctgataatgtgtttataagtgggaacaatcctcacttcataa-ccggttttgtggggttgagttaggcccaaccatgatttttaaga 159  Q
    ||||| ||||||||||||||||||  |||||||||  ||| || ||||||||||||||||| |||||||||||||| ||||| |||||    
T  35788892 cctgacaatgtgtttataagtgggggcaatcctcatctcacaagccggttttgtggggttgtgttaggcccaaccacgatttctaaga 35788979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 87 - 216
Target Start/End: Complemental strand, 24513431 - 24513301
Alignment:
Q  87 tataagtgggaacaatcctcacttcataaccggttttgtggggttgagttaggcccaaccatgatttttaagatgatatcagagcatcttc-aagatcta 185  Q
    ||||||||||  |||||||||| ||| || | | ||||| |||||| ||||||||||| || ||||| ||| ||||||||||||| || || ||||||||    
T  24513431 tataagtgggggcaatcctcacctcacaagccggtttgtagggttgtgttaggcccaatcacgatttctaacatgatatcagagcctcctctaagatcta 24513332  T
Q  186 ttgggccacctgctatcaaatttctgctatc 216  Q
    |||| ||| ||||||||| | ||| ||||||    
T  24513331 ttggaccatctgctatcagacttccgctatc 24513301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 137 - 223
Target Start/End: Complemental strand, 28245782 - 28245696
Alignment:
Q  137 aggcccaaccatgatttttaagatgatatcagagcatcttcaagatctattgggccacctgctatcaaatttctgctatcggaccac 223  Q
    ||||||||||| ||||| ||| ||| ||||||||| ||| ||||||| |||||||||||||||||||  |||| |||||||| ||||    
T  28245782 aggcccaaccacgatttctaatatggtatcagagcctctccaagatccattgggccacctgctatcaggtttccgctatcgggccac 28245696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 83 - 203
Target Start/End: Original strand, 9685406 - 9685527
Alignment:
Q  83 tgtttataagtgggaacaatcctcacttcataac-cggttttgtggggttgagttaggcccaaccatgatttttaagatgatatcagagcatcttcaaga 181  Q
    ||||||||||||||  |||||||||| ||| ||  |||||||||| ||||| |||||||||||||| ||||| ||| ||| ||||||||| ||||||  |    
T  9685406 tgtttataagtggggccaatcctcacctcacaagtcggttttgtgaggttgtgttaggcccaaccacgatttctaatatggtatcagagcctcttcacaa 9685505  T
Q  182 tctattgggccacctgctatca 203  Q
    |   |||||||||||| |||||    
T  9685506 ttctttgggccacctgttatca 9685527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 73 - 153
Target Start/End: Original strand, 21498793 - 21498874
Alignment:
Q  73 cctgataatgtgtttataagtgggaacaatcctcacttcataa-ccggttttgtggggttgagttaggcccaaccatgattt 153  Q
    ||||| ||| ||||||||||||||  |||||||||| ||| || ||||||||||||||||| |||||||||||||| |||||    
T  21498793 cctgacaatttgtttataagtgggggcaatcctcacctcacaagccggttttgtggggttgtgttaggcccaaccacgattt 21498874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 73 - 145
Target Start/End: Complemental strand, 28245612 - 28245539
Alignment:
Q  73 cctgataatgtgtttataagtgggaacaatcctcacttcataa-ccggttttgtggggttgagttaggcccaac 145  Q
    ||||| ||||||||||||||||||  |||||||||| ||| || ||||||||||||||||| ||||||||||||    
T  28245612 cctgacaatgtgtttataagtgggggcaatcctcacctcacaagccggttttgtggggttgtgttaggcccaac 28245539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 79 - 162
Target Start/End: Complemental strand, 5398555 - 5398472
Alignment:
Q  79 aatgtgtttataagtgggaacaatcctcacttcataa-ccggttttgtggggttgagttaggcccaaccatgatttttaagatga 162  Q
    ||||||||||||| ||||  |||||||||| ||| || ||||||||||||||||| |||||| ||||||||||||| ||||||||    
T  5398555 aatgtgtttataactgggg-caatcctcacctcacaagccggttttgtggggttgtgttaggtccaaccatgatttctaagatga 5398472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 117 - 201
Target Start/End: Original strand, 22445495 - 22445579
Alignment:
Q  117 cggttttgtggggttgagttaggcccaaccatgatttttaagatgatatcagagcatcttcaagatctattgggccacctgctat 201  Q
    |||||||||||||||| ||||| ||||||||  | || ||||||| ||||||||| ||||||||||| |||| ||||||| ||||    
T  22445495 cggttttgtggggttgtgttagacccaaccacaaattctaagatggtatcagagcctcttcaagatccattgagccacctactat 22445579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 116 - 203
Target Start/End: Complemental strand, 40716663 - 40716575
Alignment:
Q  116 ccggttttgtggggttgagttaggcccaaccatgatttttaagatgatatcagagcatc-ttcaagatctattgggccacctgctatca 203  Q
    |||| |||||||||||| |||||||||||||||| ||| ||||||| ||||||||| || | || ||||  ||||||||||||||||||    
T  40716663 ccggatttgtggggttgtgttaggcccaaccatggtttctaagatggtatcagagcctcatccacgatccgttgggccacctgctatca 40716575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 116 - 203
Target Start/End: Complemental strand, 14783229 - 14783142
Alignment:
Q  116 ccggttttgtggggttgagttaggcccaaccatgatttttaagatgatatcagagcatcttcaagatctattgggccacctgctatca 203  Q
    ||||||||||||||||| |||||||||||||| ||||| ||| ||| ||||||||| ||||||  ||   |||||||||||| |||||    
T  14783229 ccggttttgtggggttgtgttaggcccaaccacgatttctaatatggtatcagagcctcttcacaattctttgggccacctgttatca 14783142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 84 - 170
Target Start/End: Original strand, 17111573 - 17111659
Alignment:
Q  84 gtttataagtgggaacaatcctcac-ttcataaccggttttgtggggttgagttaggcccaaccatgatttttaagatgatatcagag 170  Q
    |||||||||||||  |||||||||| || | ||| ||||||||||||||| |||||||||||||| ||||| ||||||| ||||||||    
T  17111573 gtttataagtgggg-caatcctcaccttaaaaactggttttgtggggttgtgttaggcccaaccacgatttctaagatggtatcagag 17111659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 73 - 159
Target Start/End: Original strand, 22827536 - 22827623
Alignment:
Q  73 cctgataatgtgtttataagtgggaacaatcctcacttcataa-ccggttttgtggggttgagttaggcccaaccatgatttttaaga 159  Q
    ||||| || |||||||||||||||  |||||||||| ||| || |||||||||| |||||| |||||||||||||| ||||| |||||    
T  22827536 cctgacaacgtgtttataagtgggggcaatcctcacctcacaagccggttttgtcgggttgtgttaggcccaaccacgatttctaaga 22827623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 73 - 171
Target Start/End: Original strand, 25052850 - 25052949
Alignment:
Q  73 cctgataatgtgtttataagtgggaacaatcctcacttcataa-ccggttttgtggggttgagttaggcccaaccatgatttttaagatgatatcagagc 171  Q
    ||||| ||| ||||||||||||||   ||||| ||| ||| || ||||||||||||||||| |||||||||||||| ||||| ||| ||| |||||||||    
T  25052850 cctgacaatttgtttataagtgggggtaatccgcacctcacaagccggttttgtggggttgtgttaggcccaaccacgatttctaacatggtatcagagc 25052949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 134 - 217
Target Start/End: Complemental strand, 30530186 - 30530103
Alignment:
Q  134 gttaggcccaaccatgatttttaagatgatatcagagcatcttcaagatctattgggccacctgctatcaaatttctgctatcg 217  Q
    ||||||| ||||||  |||| ||||||| ||||||||| ||| ||||||| ||| ||||||||||||||| ||||| |||||||    
T  30530186 gttaggctcaaccacaatttctaagatggtatcagagcctctccaagatccattaggccacctgctatcagatttccgctatcg 30530103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 73 - 147
Target Start/End: Complemental strand, 39902649 - 39902574
Alignment:
Q  73 cctgataatgtgtttataagtgggaacaatcctcacttcataacc-ggttttgtggggttgagttaggcccaacca 147  Q
    ||||| ||||||||||||||||||  |||||||||| ||| || | ||||||||||||||| ||||||||||||||    
T  39902649 cctgacaatgtgtttataagtgggggcaatcctcacctcacaagctggttttgtggggttgtgttaggcccaacca 39902574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 69 - 159
Target Start/End: Original strand, 52559798 - 52559889
Alignment:
Q  69 atgacctgataatgtgtttataagtgggaacaatcctcacttcataa-ccggttttgtggggttgagttaggcccaaccatgatttttaaga 159  Q
    ||||| ||| ||||||||||||||||||| |||| ||||| ||| || |||||||||| || |||  ||||||||||||||||||| |||||    
T  52559798 atgacttgacaatgtgtttataagtgggagcaattctcacctcacaagccggttttgtaggattgtattaggcccaaccatgatttctaaga 52559889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 83 - 216
Target Start/End: Original strand, 6218212 - 6218346
Alignment:
Q  83 tgtttataagtgggaacaatcctcacttcataac-cggttttgtggggttgagttaggcccaaccatgatttttaagatgatatcagagcatcttcaaga 181  Q
    ||||||||||||||  ||||| |||| ||| ||  ||||||||||| |||| ||||| | |||||| ||||| ||||||| ||||||||| ||| |||||    
T  6218212 tgtttataagtgggggcaatcttcacctcacaagacggttttgtggagttgtgttagacacaaccacgatttctaagatggtatcagagcctctccaaga 6218311  T
Q  182 tctattgggccacctgctatcaaatttctgctatc 216  Q
    || |||||  ||||| ||||||  |||| ||||||    
T  6218312 tccattggatcacctactatcaggtttccgctatc 6218346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 73 - 146
Target Start/End: Original strand, 9279225 - 9279299
Alignment:
Q  73 cctgataatgtgtttataagtgggaacaatcctcacttca-taaccggttttgtggggttgagttaggcccaacc 146  Q
    ||||| ||||||||||||||||||  ||||| |||| ||| || ||||||||||||||||| |||||||||||||    
T  9279225 cctgacaatgtgtttataagtgggggcaatcatcacctcactagccggttttgtggggttgtgttaggcccaacc 9279299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 73 - 153
Target Start/End: Complemental strand, 53814760 - 53814679
Alignment:
Q  73 cctgataatgtgtttataagtgggaacaatcctcacttcataa-ccggttttgtggggttgagttaggcccaaccatgattt 153  Q
    ||||| ||| |||||||||||||| | ||||||||| ||| || ||||||||||||| ||| |||||||||||||| |||||    
T  53814760 cctgacaatttgtttataagtggggataatcctcacctcacaagccggttttgtgggattgtgttaggcccaaccacgattt 53814679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 69 - 161
Target Start/End: Original strand, 2516195 - 2516286
Alignment:
Q  69 atgacctgataatgtgtttataagtgggaacaatcctcacttcataaccggttttgtggggttgagttaggcccaaccatgatttttaagatg 161  Q
    ||||||||| ||| ||||||||||||||| ||||| |||| |  || ||||||||||||||||| |||||| |||||||  |||| |||||||    
T  2516195 atgacctgacaatatgtttataagtgggagcaatc-tcacctactagccggttttgtggggttgtgttaggtccaaccacaatttctaagatg 2516286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 73 - 144
Target Start/End: Complemental strand, 53828375 - 53828303
Alignment:
Q  73 cctgataatgtgtttataagtgggaacaatcctcacttcataa-ccggttttgtggggttgagttaggcccaa 144  Q
    ||||| ||| ||||||||||||||  |||||||||| |||||| ||| ||||||||||||| |||||||||||    
T  53828375 cctgacaatttgtttataagtgggggcaatcctcacctcataaaccgattttgtggggttgtgttaggcccaa 53828303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 70 - 153
Target Start/End: Complemental strand, 54054894 - 54054810
Alignment:
Q  70 tgacctgataatgtgtttataagtgggaacaatcctcacttcataa-ccggttttgtggggttgagttaggcccaaccatgattt 153  Q
    |||||| | ||| ||||||||||||||  |||| ||||| |||||| ||| ||||||||||||| |||||||||||||| |||||    
T  54054894 tgacctaacaatttgtttataagtgggggcaattctcacctcataagccgtttttgtggggttgtgttaggcccaaccacgattt 54054810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 83 - 153
Target Start/End: Original strand, 9685640 - 9685711
Alignment:
Q  83 tgtttataagtgggaacaatcctcacttcataa-ccggttttgtggggttgagttaggcccaaccatgattt 153  Q
    ||||||||||||||  |||||||||| ||| || |||||||| |||||||| |||||||||||||| |||||    
T  9685640 tgtttataagtgggggcaatcctcacctcacaagccggttttatggggttgtgttaggcccaaccacgattt 9685711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 73 - 147
Target Start/End: Original strand, 21684996 - 21685071
Alignment:
Q  73 cctgataatgtgtttataagtgggaacaatcctcacttcataa-ccggttttgtggggttgagttaggcccaacca 147  Q
    ||||| |||||||||||||||||||  ||||||||| ||| || ||| ||||||||||||| |||| |||||||||    
T  21684996 cctgacaatgtgtttataagtgggataaatcctcacctcacaagccgattttgtggggttgtgttaagcccaacca 21685071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 74 - 203
Target Start/End: Complemental strand, 21646586 - 21646456
Alignment:
Q  74 ctgataatgtgtttataagtgggaacaatcctcacttcataac-cggttttgtggggttgagttaggcccaaccatgatttttaagatgatatcagagca 172  Q
    |||| |||||||||| |||| || ||||||||||| | | ||  ||||||| ||||| |   ||||||||||||| ||||||||||||| ||| ||||      
T  21646586 ctgacaatgtgtttacaagtagggacaatcctcaccttacaagtcggttttatggggctctattaggcccaaccacgatttttaagatggtattagagtc 21646487  T
Q  173 tcttcaagatctattgggccacctgctatca 203  Q
    ||| ||||||  |||||| ||||||||||||    
T  21646486 tctccaagattcattgggtcacctgctatca 21646456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 121 - 171
Target Start/End: Complemental strand, 52827462 - 52827412
Alignment:
Q  121 tttgtggggttgagttaggcccaaccatgatttttaagatgatatcagagc 171  Q
    |||||| ||||| |||||||||||||||||||| ||||||| |||||||||    
T  52827462 tttgtgaggttgtgttaggcccaaccatgatttctaagatggtatcagagc 52827412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 119 - 203
Target Start/End: Original strand, 8902672 - 8902757
Alignment:
Q  119 gttttgtggggttgagttaggcccaaccatgatttttaagatgatatcagagca-tcttcaagatctattgggccacctgctatca 203  Q
    |||||||||||||  |||||| ||||||| ||||  || |||| |||||||||| |||  |||||||||||||||||||| |||||    
T  8902672 gttttgtggggttatgttaggtccaaccacgattgctaggatggtatcagagcattctctaagatctattgggccacctgttatca 8902757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 73 - 153
Target Start/End: Original strand, 20821971 - 20822052
Alignment:
Q  73 cctgataatgtgtttataagtgggaacaatcctcacttcataa-ccggttttgtggggttgagttaggcccaaccatgattt 153  Q
    ||||| ||| ||||||||||||||  |||| ||||| ||| || ||||||||||||| ||| |||||||||||||| |||||    
T  20821971 cctgacaatttgtttataagtgggggcaattctcacctcacaagccggttttgtgggattgtgttaggcccaaccacgattt 20822052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 120 - 203
Target Start/End: Original strand, 4464341 - 4464425
Alignment:
Q  120 ttttgtggggttgagttaggcccaaccatgatttttaagatgatatcagagcat-cttcaagatctattgggccacctgctatca 203  Q
    ||||||||||||  ||||| |||||||| || || ||||||| ||||||||| | |||||||||| |||||| ||| ||||||||    
T  4464341 ttttgtggggttttgttagacccaaccacgaattctaagatggtatcagagcctccttcaagatccattgggtcacatgctatca 4464425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 129 - 217
Target Start/End: Complemental strand, 24226677 - 24226589
Alignment:
Q  129 gttgagttaggcccaaccatgatttttaagatgatatcagagcatcttcaagatctattgggccacctgctatcaaatttctgctatcg 217  Q
    |||| ||||||  ||||||  |||| ||||||| |||||||  || |||||||| |||||| |||| ||||||||||||||| ||||||    
T  24226677 gttgtgttaggtgcaaccacaatttctaagatggtatcagaaaattttcaagatttattggaccacatgctatcaaatttctactatcg 24226589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 163 - 223
Target Start/End: Complemental strand, 27634311 - 27634251
Alignment:
Q  163 tatcagagcatcttcaagatctattgggccacctgctatcaaatttctgctatcggaccac 223  Q
    ||||||||| ||| ||||||| ||||| |||| ||||||||  ||||||||||||||||||    
T  27634311 tatcagagcctctccaagatccattggaccacttgctatcaggtttctgctatcggaccac 27634251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 120 - 159
Target Start/End: Original strand, 7926604 - 7926643
Alignment:
Q  120 ttttgtggggttgagttaggcccaaccatgatttttaaga 159  Q
    ||||||||||||| |||||||||||||||||||| |||||    
T  7926604 ttttgtggggttgtgttaggcccaaccatgatttctaaga 7926643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 155 - 218
Target Start/End: Complemental strand, 9908834 - 9908771
Alignment:
Q  155 taagatgatatcagagcatcttcaagatctattgggccacctgctatcaaatttctgctatcgg 218  Q
    ||||||| ||||||||  ||| ||||||||||||| ||||||||||||| ||||| | ||||||    
T  9908834 taagatggtatcagagtctctccaagatctattggaccacctgctatcagatttccgttatcgg 9908771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 69 - 112
Target Start/End: Complemental strand, 32334000 - 32333957
Alignment:
Q  69 atgacctgataatgtgtttataagtgggaacaatcctcacttca 112  Q
    |||||||||  ||||||||||||||||| |||||||||||||||    
T  32334000 atgacctgaacatgtgtttataagtggggacaatcctcacttca 32333957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 69 - 108
Target Start/End: Complemental strand, 40717296 - 40717257
Alignment:
Q  69 atgacctgataatgtgtttataagtgggaacaatcctcac 108  Q
    ||||||||| |||||||||||||||||| |||||||||||    
T  40717296 atgacctgacaatgtgtttataagtggggacaatcctcac 40717257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 74 - 147
Target Start/End: Complemental strand, 5398296 - 5398223
Alignment:
Q  74 ctgataatgtgtttataagtgggaacaatcctcacttcataa-ccggttttgtggggttgagttaggcccaacca 147  Q
    |||| |||||||||||||| |||  |||||||||  ||| || ||||||||||||||||| ||||||||||||||    
T  5398296 ctgacaatgtgtttataagagggg-caatcctcatctcacaagccggttttgtggggttgtgttaggcccaacca 5398223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 121 - 167
Target Start/End: Original strand, 23209888 - 23209934
Alignment:
Q  121 tttgtggggttgagttaggcccaaccatgatttttaagatgatatca 167  Q
    ||||| |||||||||||||||||| || ||||| |||||||||||||    
T  23209888 tttgtagggttgagttaggcccaatcacgatttctaagatgatatca 23209934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 177 - 223
Target Start/End: Complemental strand, 25324250 - 25324204
Alignment:
Q  177 caagatctattgggccacctgctatcaaatttctgctatcggaccac 223  Q
    ||||||| |||||||||||||||||||| |||| |||||||| ||||    
T  25324250 caagatccattgggccacctgctatcaagtttccgctatcgggccac 25324204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 79 - 132
Target Start/End: Complemental strand, 28246165 - 28246111
Alignment:
Q  79 aatgtgtttataagtgggaacaatcctcacttcataa-ccggttttgtggggttg 132  Q
    ||||||||||||||||||  |||||||||| ||| || |||||||||||||||||    
T  28246165 aatgtgtttataagtgggggcaatcctcacctcacaagccggttttgtggggttg 28246111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 73 - 142
Target Start/End: Complemental strand, 31254493 - 31254423
Alignment:
Q  73 cctgataatgtgtttataagtgggaacaatcctca-cttcataaccggttttgtggggttgagttaggccc 142  Q
    ||||| ||||||||||||||||||  ||||||||| |||   ||||||||||||| || ||||||||||||    
T  31254493 cctgacaatgtgtttataagtgggggcaatcctcaccttacaaaccggttttgtgaggatgagttaggccc 31254423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 69 - 161
Target Start/End: Complemental strand, 11036601 - 11036508
Alignment:
Q  69 atgacctgataatgtgtttataagtgggaacaatcctcacttcataa-ccggttttgtggggttgagttaggcccaaccatgatttttaagatg 161  Q
    ||||| ||| ||||||||||||||| ||  ||||| |||| ||| || ||||||||| ||||||| ||||| ||||||||  |||| |||||||    
T  11036601 atgacatgacaatgtgtttataagttggggcaatcatcacctcacaagccggttttgcggggttgtgttagacccaaccacaatttctaagatg 11036508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 134 - 203
Target Start/End: Complemental strand, 13555501 - 13555432
Alignment:
Q  134 gttaggcccaaccatgatttttaagatgatatcagagcatcttcaagatctattgggccacctgctatca 203  Q
    ||||||||||||||  |||| | | ||| ||||||||| ||| ||||||| ||||| |||||||||||||    
T  13555501 gttaggcccaaccacaatttctgatatggtatcagagcctctccaagatccattggaccacctgctatca 13555432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 79 - 147
Target Start/End: Complemental strand, 35796822 - 35796753
Alignment:
Q  79 aatgtgtttataagtgggaacaatcctcacttcataa-ccggttttgtggggttgagttaggcccaacca 147  Q
    ||||||||||||||||||  |||||||||| ||| || ||||||||||| ||||| |||| | |||||||    
T  35796822 aatgtgtttataagtgggggcaatcctcacctcacaagccggttttgtgaggttgtgttaagtccaacca 35796753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 79 - 167
Target Start/End: Original strand, 37836084 - 37836173
Alignment:
Q  79 aatgtgtttataagtgggaacaatcctcacttcataa-ccggttttgtggggttgagttaggcccaaccatgatttttaagatgatatca 167  Q
    ||||| ||||||||||||  |||||||| | | | || ||||||||||||||||| |||||||| |||||  |||| ||||||| |||||    
T  37836084 aatgtatttataagtgggggcaatcctctccttacaagccggttttgtggggttgtgttaggcctaaccacaatttctaagatggtatca 37836173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 118 - 159
Target Start/End: Complemental strand, 41187972 - 41187931
Alignment:
Q  118 ggttttgtggggttgagttaggcccaaccatgatttttaaga 159  Q
    |||||||||||||||||||| ||||||||| ||||| |||||    
T  41187972 ggttttgtggggttgagttatgcccaaccacgatttctaaga 41187931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 82 - 147
Target Start/End: Complemental strand, 50870557 - 50870492
Alignment:
Q  82 gtgtttataagtgggaacaatcctcacttcataaccggttttgtggggttgagttaggcccaacca 147  Q
    |||||||||||||||  || ||||||| || || ||| ||||||||||||| |||||| |||||||    
T  50870557 gtgtttataagtgggggcagtcctcacctcttagccgattttgtggggttgtgttaggtccaacca 50870492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 120 - 173
Target Start/End: Original strand, 52827468 - 52827521
Alignment:
Q  120 ttttgtggggttgagttaggcccaaccatgatttttaagatgatatcagagcat 173  Q
    ||||||| ||||| || | ||||||||| ||||||||||||| |||||||||||    
T  52827468 ttttgtgaggttgtgtcaagcccaaccacgatttttaagatggtatcagagcat 52827521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 134 - 203
Target Start/End: Complemental strand, 54055062 - 54054993
Alignment:
Q  134 gttaggcccaaccatgatttttaagatgatatcagagcatcttcaagatctattgggccacctgctatca 203  Q
    |||||||||||||| | ||| ||| ||| ||||||||| |||||| ||| | |||||||||||| |||||    
T  54055062 gttaggcccaaccacgctttctaatatggtatcagagcctcttcacgattttttgggccacctgttatca 54054993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 73 - 140
Target Start/End: Complemental strand, 12869115 - 12869047
Alignment:
Q  73 cctgataatgtgtttataagtgggaacaatcctcacttcataa-ccggttttgtggggttgagttaggc 140  Q
    ||||| ||| ||||||||||||||  ||||| |||| ||| || ||||||||||||||||| |||||||    
T  12869115 cctgacaatttgtttataagtgggggcaatcatcacctcacaagccggttttgtggggttgtgttaggc 12869047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 120 - 196
Target Start/End: Complemental strand, 25324071 - 25323995
Alignment:
Q  120 ttttgtggggttgagttaggcccaaccatgatttttaagatgatatcagagcatcttcaagatctattgggccacct 196  Q
    ||||||||||||| ||   || |||||||||||| ||| ||| || |||||| ||| |||||||| |||||||||||    
T  25324071 ttttgtggggttgtgtagcgcacaaccatgatttctaatatggtagcagagcctctccaagatctgttgggccacct 25323995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 117 - 189
Target Start/End: Original strand, 32002366 - 32002438
Alignment:
Q  117 cggttttgtggggttgagttaggcccaaccatgatttttaagatgatatcagagcatcttcaagatctattgg 189  Q
    |||||||||| |||||  |||| ||||| ||  |||||||||||| ||||||| | ||| |||||||||||||    
T  32002366 cggttttgtgaggttgtattagacccaaacacaatttttaagatggtatcagaacctctccaagatctattgg 32002438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #78
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 84 - 203
Target Start/End: Original strand, 43742998 - 43743118
Alignment:
Q  84 gtttataagtgggaacaatcctcacttcataa-ccggttttgtggggttgagttaggcccaaccatgatttttaagatgatatcagagcatcttcaagat 182  Q
    ||||||||||||||  ||||||||  ||| || || ||||| |||||||  ||||| || ||||| ||||| ||||||  ||||||||| |||  |||||    
T  43742998 gtttataagtgggagtaatcctcaactcacaagccagttttttggggttatgttagacctaaccacgatttataagatagtatcagagcctctcaaagat 43743097  T
Q  183 ctattgggccacctgctatca 203  Q
    | ||| | |||||||||||||    
T  43743098 ccatttgaccacctgctatca 43743118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0692 (Bit Score: 71; Significance: 3e-32; HSPs: 2)
Name: scaffold0692
Description:

Target: scaffold0692; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 74 - 223
Target Start/End: Complemental strand, 5839 - 5689
Alignment:
Q  74 ctgataatgtgtttataagtgggaacaatcctcacttcataa-ccggttttgtggggttgagttaggcccaaccatgatttttaagatgatatcagagca 172  Q
    |||| ||||||||||||||||||  |||||||||  ||| || ||||||||| ||||||| |||||||||||||| ||||| ||||||| |||||||||     
T  5839 ctgacaatgtgtttataagtgggggcaatcctcatctcacaagccggttttgcggggttgtgttaggcccaaccacgatttctaagatggtatcagagcc 5740  T
Q  173 tcttcaagatctattgggccacctgctatcaaatttctgctatcggaccac 223  Q
    ||| ||||||| |||| ||||||||||||||  |||| |||||||||||||    
T  5739 tctccaagatccattgagccacctgctatcaggtttccgctatcggaccac 5689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0692; HSP #2
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 79 - 159
Target Start/End: Complemental strand, 5624 - 5543
Alignment:
Q  79 aatgtgtttataagtgggaacaatcctcacttcataa-ccggttttgtggggttgagttaggcccaaccatgatttttaaga 159  Q
    ||||||||||||||||||  |||||||||||||| || ||||||||| ||||||| ||||||||||||||| |||| |||||    
T  5624 aatgtgtttataagtgggggcaatcctcacttcacaagccggttttgcggggttgtgttaggcccaaccataatttctaaga 5543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 68; Significance: 2e-30; HSPs: 65)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 73 - 203
Target Start/End: Original strand, 54567890 - 54568021
Alignment:
Q  73 cctgataatgtgtttataagtgggaacaatcctcacttcataa-ccggttttgtggggttgagttaggcccaaccatgatttttaagatgatatcagagc 171  Q
    ||||| ||||||||||||||||||   ||||||||| ||| || ||||||||||||||||| |||||||||||||| ||||| ||||||| |||||||||    
T  54567890 cctgacaatgtgtttataagtgggggaaatcctcacctcacaagccggttttgtggggttgtgttaggcccaaccacgatttctaagatggtatcagagc 54567989  T
Q  172 atcttcaagatctattgggccacctgctatca 203  Q
     ||| ||||||| |||| ||||||||||||||    
T  54567990 ctctccaagatccattgagccacctgctatca 54568021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 82 - 223
Target Start/End: Original strand, 4155331 - 4155473
Alignment:
Q  82 gtgtttataagtgggaacaatcctcacttcataa-ccggttttgtggggttgagttaggcccaaccatgatttttaagatgatatcagagcatcttcaag 180  Q
    |||||||||||||||  |||||||||| ||| || ||||||||||||||||| |||||||||||||| ||||| ||||||| ||||||||  ||| ||||    
T  4155331 gtgtttataagtgggggcaatcctcacctcaaaagccggttttgtggggttgtgttaggcccaaccacgatttctaagatggtatcagagtctctccaag 4155430  T
Q  181 atctattgggccacctgctatcaaatttctgctatcggaccac 223  Q
    ||  |||||||||||||||||||  |||| |||||||| ||||    
T  4155431 attcattgggccacctgctatcaggtttccgctatcgggccac 4155473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 43 - 195
Target Start/End: Original strand, 54368481 - 54368637
Alignment:
Q  43 agtgttaagagtctcacatcctgata----atgacctgataatgtgtttataagtgggaacaatcctcacttcataa-ccggttttgtggggttgagtta 137  Q
    ||||||||||||| ||||||| ||||    ||| ||||| ||||||||||||||||||  |||||||||| ||| || |||||||| |||||||| ||||    
T  54368481 agtgttaagagtcccacatcc-gatagaagatggcctgaaaatgtgtttataagtgggggcaatcctcacctcacaagccggttttatggggttgtgtta 54368579  T
Q  138 ggcccaaccatgatttttaagatgatatcagagcatcttcaagatctattgggccacc 195  Q
    | |||||||| ||||| ||||||| ||||||||| ||||||||||| |||||||||||    
T  54368580 gacccaaccacgatttctaagatggtatcagagcctcttcaagatccattgggccacc 54368637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 73 - 223
Target Start/End: Complemental strand, 20327935 - 20327784
Alignment:
Q  73 cctgataatgtgtttataagtgggaacaatcctcacttcataa-ccggttttgtggggttgagttaggcccaaccatgatttttaagatgatatcagagc 171  Q
    ||||| ||| ||||||||||||||  |||||||||| ||| || ||||||||||||||||| |||||||||||||||||||| ||| ||| |||||| ||    
T  20327935 cctgacaatttgtttataagtgggggcaatcctcacctcacaagccggttttgtggggttgtgttaggcccaaccatgatttctaatatggtatcagtgc 20327836  T
Q  172 atcttcaagatctattgggccacctgctatcaaatttctgctatcggaccac 223  Q
     |||  || ||| |||||||||||||||||||  |||| |||||||| ||||    
T  20327835 ctctctaaaatccattgggccacctgctatcaggtttccgctatcgggccac 20327784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 73 - 203
Target Start/End: Complemental strand, 1723162 - 1723031
Alignment:
Q  73 cctgataatgtgtttataagtgggaacaatcctcacttcataa-ccggttttgtggggttgagttaggcccaaccatgatttttaagatgatatcagagc 171  Q
    ||||| ||| ||||||||||||||  |||||||||| ||| || ||||||||||||||||| |||||||||||||| ||||| ||||||| |||||||||    
T  1723162 cctgacaatttgtttataagtgggggcaatcctcacctcacaagccggttttgtggggttgtgttaggcccaaccacgatttctaagatggtatcagagc 1723063  T
Q  172 atcttcaagatctattgggccacctgctatca 203  Q
     |||||| |||   |||||||||||| |||||    
T  1723062 ctcttcacgattgtttgggccacctgttatca 1723031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 73 - 218
Target Start/End: Complemental strand, 35038514 - 35038368
Alignment:
Q  73 cctgataatgtgtttataagtgggaacaatcctcacttcataacc-ggttttgtggggttgagttaggcccaaccatgatttttaagatgatatcagagc 171  Q
    ||||| ||||||||||||||||||  |||||||||| | | || | ||||||||||||||| |||||||||||||| || || ||||||| |||||| ||    
T  35038514 cctgacaatgtgtttataagtgggggcaatcctcacctgacaagctggttttgtggggttgtgttaggcccaaccacgacttctaagatggtatcagtgc 35038415  T
Q  172 atcttcaagatctattgggccacctgctatcaaatttctgctatcgg 218  Q
     ||| ||||||| |||||||||||||| ||||  |||| ||||||||    
T  35038414 ctctccaagatccattgggccacctgcaatcaggtttccgctatcgg 35038368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 73 - 203
Target Start/End: Original strand, 11589783 - 11589914
Alignment:
Q  73 cctgataatgtgtttataagtgggaacaatcctcacttcataa-ccggttttgtggggttgagttaggcccaaccatgatttttaagatgatatcagagc 171  Q
    ||||| ||| ||||||||||||||  |||||||||| ||| || ||||||||||||||||| |||||||||||||| ||||| ||| ||| |||||||||    
T  11589783 cctgacaatttgtttataagtgggggcaatcctcacctcacaagccggttttgtggggttgtgttaggcccaaccacgatttctaatatggtatcagagc 11589882  T
Q  172 atcttcaagatctattgggccacctgctatca 203  Q
     |||||| |||   |||||||||||| |||||    
T  11589883 ctcttcacgattctttgggccacctgttatca 11589914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 74 - 219
Target Start/End: Original strand, 49629604 - 49629750
Alignment:
Q  74 ctgataatgtgtttataagtgggaacaatcctcacttcataa-ccggttttgtggggttgagttaggcccaaccatgatttttaagatgatatcagagca 172  Q
    |||| |||||||||||||||||   |||||| ||| ||| || ||||||||||||||||| ||||| |||||  |  |||||||| ||| ||| |||||     
T  49629604 ctgaaaatgtgtttataagtggcggcaatccccacctcacaaaccggttttgtggggttgtgttagacccaattaccatttttaaaatggtattagagcc 49629703  T
Q  173 tcttcaagatctattgggccacctgctatcaaatttctgctatcgga 219  Q
    ||||||||||| ||||| |||||||||||||  ||||||||||||||    
T  49629704 tcttcaagatccattggaccacctgctatcaggtttctgctatcgga 49629750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 69 - 216
Target Start/End: Complemental strand, 12930218 - 12930069
Alignment:
Q  69 atgacctgataatgtgtttataagtgggaacaatcctcacttcataa-ccggttttgtggggttgagttaggcccaaccatgatttttaagatgatatca 167  Q
    ||||||||| |||||||| ||| ||||| ||||| ||||||||| || ||||||||||||||||| ||||||||||||||  |||| ||||||| |||||    
T  12930218 atgacctgacaatgtgttcatatgtggggacaattctcacttcacaagccggttttgtggggttgtgttaggcccaaccaccatttctaagatggtatca 12930119  T
Q  168 gagcat-cttcaagatctattgggccacctgctatcaaatttctgctatc 216  Q
     ||| | || || ||||  ||||||||||||||||||  |||||| ||||    
T  12930118 aagcctcctccatgatccgttgggccacctgctatcaggtttctgttatc 12930069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 43 - 203
Target Start/End: Original strand, 16239556 - 16239721
Alignment:
Q  43 agtgttaagagtctcacatcctgata----atgacctgataatgtgtttataagtgggaacaatcctcacttcataa-ccggttttgtggggttgagtta 137  Q
    ||||||||||||||||||||  ||||    ||| ||||| ||||||||||||||||||  ||| |||||| ||| || ||||||||||||| ||| ||||    
T  16239556 agtgttaagagtctcacatcg-gataggacatggcctgacaatgtgtttataagtgggggcaaacctcacctcacaagccggttttgtgggattgtgtta 16239654  T
Q  138 ggcccaaccatgatttttaagatgatatcagagcat-cttcaagatctattgggccacctgctatca 203  Q
    |||||||||| ||||| ||||||| ||||||||| | || |||||||  || |||||||||||||||    
T  16239655 ggcccaaccacgatttctaagatggtatcagagcctcctccaagatccgtttggccacctgctatca 16239721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 73 - 203
Target Start/End: Complemental strand, 16927035 - 16926904
Alignment:
Q  73 cctgataatgtgtttataagtgggaacaatcctcacttcataa-ccggttttgtggggttgagttaggcccaaccatgatttttaagatgatatcagagc 171  Q
    ||||| ||||||||||||||||||   ||||||||  ||| || ||||||||||||||||| |||| || |||||| ||||| ||||||| ||||||||     
T  16927035 cctgacaatgtgtttataagtgggggtaatcctcatctcacaagccggttttgtggggttgtgttaagctcaaccacgatttctaagatggtatcagagt 16926936  T
Q  172 atcttcaagatctattgggccacctgctatca 203  Q
     ||||||||||| |||||| |||||| |||||    
T  16926935 ctcttcaagatccattgggtcacctgttatca 16926904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 120 - 217
Target Start/End: Complemental strand, 26272362 - 26272265
Alignment:
Q  120 ttttgtggggttgagttaggcccaaccatgatttttaagatgatatcagagcatcttcaagatctattgggccacctgctatcaaatttctgctatcg 217  Q
    ||||||||||||| ||||| ||||||||  |||| ||||||||||||| ||||||||||| ||| ||||||||| ||||| |||  ||||||||||||    
T  26272362 ttttgtggggttgtgttagacccaaccacaatttctaagatgatatcaaagcatcttcaatatccattgggccatctgctttcaggtttctgctatcg 26272265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 73 - 163
Target Start/End: Complemental strand, 20327700 - 20327609
Alignment:
Q  73 cctgataatgtgtttataagtgggaacaatcctcacttcataa-ccggttttgtggggttgagttaggcccaaccatgatttttaagatgat 163  Q
    ||||| ||||| ||||||||||||  |||||||||| ||| || ||||||||||||||||| |||||||||||||| ||||||||| |||||    
T  20327700 cctgacaatgtatttataagtgggggcaatcctcacctcacaagccggttttgtggggttgtgttaggcccaaccacgatttttaaaatgat 20327609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 83 - 217
Target Start/End: Original strand, 45828027 - 45828162
Alignment:
Q  83 tgtttataagtgggaacaatcctcacttcataa-ccggttttgtggggttgagttaggcccaaccatgatttttaagatgatatcagagcatcttcaaga 181  Q
    ||||||||||| ||  |||||||||| ||| || ||||||||||| ||||| ||||||||| ||||  |||| ||||||| ||||||||| ||| |||||    
T  45828027 tgtttataagttggggcaatcctcacctcacaagccggttttgtgaggttgtgttaggccctaccacaatttctaagatggtatcagagcctctccaaga 45828126  T
Q  182 tctattgggccacctgctatcaaatttctgctatcg 217  Q
    || |||| ||||||||||| ||  |||| |||||||    
T  45828127 tccattgcgccacctgctaccaggtttccgctatcg 45828162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 74 - 169
Target Start/End: Original strand, 22729099 - 22729195
Alignment:
Q  74 ctgataatgtgtttataagtgggaacaatcctcacttcataa-ccggttttgtggggttgagttaggcccaaccatgatttttaagatgatatcaga 169  Q
    |||| |||||||||| |||||||  |||||||||||||| || ||||||||||| ||||| ||||||||||||||  |||| ||||||| |||||||    
T  22729099 ctgacaatgtgtttacaagtgggggcaatcctcacttcacaagccggttttgtgaggttgtgttaggcccaaccacaatttctaagatggtatcaga 22729195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 73 - 159
Target Start/End: Original strand, 4155557 - 4155644
Alignment:
Q  73 cctgataatgtgtttataagtgggaacaatcctcacttcataa-ccggttttgtggggttgagttaggcccaaccatgatttttaaga 159  Q
    ||||| |||||||||||||||||| ||||||||||| ||| || |||||||| | |||||| |||||||||||||| ||||| |||||    
T  4155557 cctgacaatgtgtttataagtggggacaatcctcacctcaaaagccggttttttagggttgtgttaggcccaaccacgatttctaaga 4155644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 80 - 217
Target Start/End: Complemental strand, 13575000 - 13574861
Alignment:
Q  80 atgtgtttataagtgggaacaatcctcacttcataa-ccggttttgtggggttgagttaggcccaaccatgatttttaagatgatatcagagcatc-ttc 177  Q
    |||||||||||||||||   ||||||||| ||| || || |||||||||||||| ||||||||||||||  |||| ||| ||| ||||| ||| ||  |     
T  13575000 atgtgtttataagtgggggaaatcctcacctcacaagccagttttgtggggttgtgttaggcccaaccacaatttctaatatggtatcaaagcctcagtt 13574901  T
Q  178 aagatctattgggccacctgctatcaaatttctgctatcg 217  Q
    |||||| |||||||||||||||||||  |||| |||||||    
T  13574900 aagatccattgggccacctgctatcaggtttccgctatcg 13574861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 73 - 163
Target Start/End: Complemental strand, 20303150 - 20303059
Alignment:
Q  73 cctgataatgtgtttataagtgggaacaatcctcacttcataa-ccggttttgtggggttgagttaggcccaaccatgatttttaagatgat 163  Q
    ||||| ||||| ||||||||||||  |||||||||| ||| || ||||||||||||| ||| ||||||| |||||| |||||||||||||||    
T  20303150 cctgacaatgtatttataagtgggggcaatcctcacctcacaaaccggttttgtgggattgtgttaggctcaaccacgatttttaagatgat 20303059  T

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Target: chr3; HSP #19
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 73 - 159
Target Start/End: Complemental strand, 35038280 - 35038193
Alignment:
Q  73 cctgataatgtgtttataagtgggaacaatcctcacttcataa-ccggttttgtggggttgagttaggcccaaccatgatttttaaga 159  Q
    ||||| ||||||||||||||||||   ||||||||| ||| || ||||||||||||||||| |||||||||||||| ||||| |||||    
T  35038280 cctgacaatgtgtttataagtgggggaaatcctcacctcacaagccggttttgtggggttgtgttaggcccaaccacgatttctaaga 35038193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 74 - 170
Target Start/End: Original strand, 39269330 - 39269427
Alignment:
Q  74 ctgataatgtgtttataagtgggaacaatcctcacttcataa-ccggttttgtggggttgagttaggcccaaccatgatttttaagatgatatcagag 170  Q
    |||| ||||||||||||||||||  |||||||||| ||| || ||||||||| ||| ||| |||||||| ||| | ||||||||||||| ||||||||    
T  39269330 ctgacaatgtgtttataagtgggggcaatcctcacctcacaagccggttttgagggattgtgttaggcctaactacgatttttaagatggtatcagag 39269427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 73 - 160
Target Start/End: Original strand, 8018966 - 8019054
Alignment:
Q  73 cctgataatgtgtttataagtgggaacaatcctcacttcataa-ccggttttgtggggttgagttaggcccaaccatgatttttaagat 160  Q
    ||||| ||| ||||||||||||||  |||||||||| ||| || ||||||||||||||||| ||||||||||||||  |||| ||||||    
T  8018966 cctgaaaatttgtttataagtgggtgcaatcctcacctcacaagccggttttgtggggttgtgttaggcccaaccacaatttctaagat 8019054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 116 - 203
Target Start/End: Complemental strand, 20303427 - 20303340
Alignment:
Q  116 ccggttttgtggggttgagttaggcccaaccatgatttttaagatgatatcagagcatcttcaagatctattgggccacctgctatca 203  Q
    ||||||||||||||||| |||||| |||||||  |||| ||| ||| ||||||||| |||  || ||| |||||||||||||||||||    
T  20303427 ccggttttgtggggttgtgttaggtccaaccacaatttctaatatggtatcagagcctctctaaaatccattgggccacctgctatca 20303340  T

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Target: chr3; HSP #23
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 73 - 171
Target Start/End: Complemental strand, 45139057 - 45138958
Alignment:
Q  73 cctgataatgtgtttataagtgggaacaatcctcacttcataa-ccggttttgtggggttgagttaggcccaaccatgatttttaagatgatatcagagc 171  Q
    ||||| || ||||| |||||||||  |||||||||| ||| || ||||||||||||||||| || || |||||||| ||||| ||||||| |||||||||    
T  45139057 cctgacaacgtgttaataagtgggggcaatcctcacctcacaagccggttttgtggggttgtgtaagacccaaccacgatttctaagatggtatcagagc 45138958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 80 - 153
Target Start/End: Complemental strand, 50052619 - 50052544
Alignment:
Q  80 atgtgtttataagtgggaa-caatcctcacttcataa-ccggttttgtggggttgagttaggcccaaccatgattt 153  Q
    |||||||||||||||||   |||||||||||||| || ||||||||||||||||| |||||||||||||| |||||    
T  50052619 atgtgtttataagtggggggcaatcctcacttcacaagccggttttgtggggttgtgttaggcccaaccacgattt 50052544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 73 - 178
Target Start/End: Original strand, 9272959 - 9273065
Alignment:
Q  73 cctgataatgtgtttataagtgggaacaatcctcacttcataa-ccggttttgtggggttgagttaggcccaaccatgatttttaagatgatatcagagc 171  Q
    ||||||||| ||||||||||||||  ||| |||||| ||| || ||||||||||||||||| |||| |||||||||  |||| ||| ||| ||||||| |    
T  9272959 cctgataatttgtttataagtgggggcaaccctcacctcacaagccggttttgtggggttgtgttaagcccaaccaccatttctaatatggtatcagaac 9273058  T
Q  172 atcttca 178  Q
     ||||||    
T  9273059 ctcttca 9273065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 79 - 159
Target Start/End: Complemental strand, 50083161 - 50083079
Alignment:
Q  79 aatgtgtttataagtgggaacaatcctcacttcataa-ccggttttgtgggg-ttgagttaggcccaaccatgatttttaaga 159  Q
    ||||||||||||||||||   ||||||||| ||| || |||||||||||||| ||| |||||||||||||||||||| |||||    
T  50083161 aatgtgtttataagtgggggaaatcctcacctcacaagccggttttgtgggggttgtgttaggcccaaccatgatttctaaga 50083079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 74 - 170
Target Start/End: Complemental strand, 17001506 - 17001409
Alignment:
Q  74 ctgataatgtgtttataagtgggaacaatcctcacttcataac-cggttttgtggggttgagttaggcccaaccatgatttttaagatgatatcagag 170  Q
    |||| ||||||||||||||||||  ||||| |||| ||||||  || ||||||||||| | |||||| ||||||||||||| ||| ||| ||||||||    
T  17001506 ctgacaatgtgtttataagtgggggcaatcatcacctcataaggcgattttgtggggtagtgttaggtccaaccatgatttctaaaatggtatcagag 17001409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 155 - 223
Target Start/End: Complemental strand, 22775638 - 22775569
Alignment:
Q  155 taagatgatatcagagcatc-ttcaagatctattgggccacctgctatcaaatttctgctatcggaccac 223  Q
    ||||||| ||||||||| || ||||||||||||||||||||||||||| |  ||||||||||||| ||||    
T  22775638 taagatggtatcagagcctccttcaagatctattgggccacctgctattaggtttctgctatcgggccac 22775569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 79 - 215
Target Start/End: Complemental strand, 29215894 - 29215758
Alignment:
Q  79 aatgtgtttataagtgggaacaatcctcacttcataa-ccggttttgtggggttgagttaggcccaaccatgatttttaagatgatatcagagcatcttc 177  Q
    |||||||||||||||||  | ||||||||| ||| |  || |||||||||||  | |||||| | ||||||||||| ||||||||||| ||||| |||||    
T  29215894 aatgtgtttataagtggtgataatcctcacctcacatgccagttttgtggggc-gtgttaggtctaaccatgatttctaagatgatattagagcttcttc 29215796  T
Q  178 aagatctattgggccacctgctatcaaatttctgctat 215  Q
    || ||  ||| ||||||||  ||||| |||||||||||    
T  29215795 aaaattcattaggccacctcttatcagatttctgctat 29215758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 117 - 209
Target Start/End: Complemental strand, 8142688 - 8142596
Alignment:
Q  117 cggttttgtggggttgagttaggcccaaccatgatttttaagatgatatcagagcatcttcaagatctattgggccacctgctatcaaatttc 209  Q
    |||||||||||||||| |||||| | ||||| ||||| ||||||| ||||||||| |||| || ||| ||| || || ||||||||| |||||    
T  8142688 cggttttgtggggttgtgttaggtctaaccacgatttctaagatggtatcagagcctctttaaaatccattaggtcatctgctatcagatttc 8142596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 74 - 157
Target Start/End: Original strand, 9273194 - 9273278
Alignment:
Q  74 ctgataatgtgtttataagtgggaacaatcctcacttcataacc-ggttttgtggggttgagttaggcccaaccatgatttttaa 157  Q
    |||| ||| ||||||||||||||  |||||||||||||| || | ||||||||||||||| ||||||| ||||||  ||||||||    
T  9273194 ctgacaatttgtttataagtgggggcaatcctcacttcacaagctggttttgtggggttgtgttaggctcaaccaccatttttaa 9273278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 68 - 159
Target Start/End: Complemental strand, 17001333 - 17001241
Alignment:
Q  68 aatgacctgataatgtgtttataagtgggaacaatcctcacttcat-aaccggttttgtggggttgagttaggcccaaccatgatttttaaga 159  Q
    |||| ||||| |||||| |||||||||||| ||||||||||||||| || |||||||||| | ||  |||| ||||||||||| ||| |||||    
T  17001333 aatggcctgacaatgtgattataagtgggagcaatcctcacttcataaaacggttttgtgagattatgttatgcccaaccatgctttctaaga 17001241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 70 - 153
Target Start/End: Original strand, 18757837 - 18757921
Alignment:
Q  70 tgacctgataatgtgtttataagtgggaacaatcctcacttcataac-cggttttgtggggttgagttaggcccaaccatgattt 153  Q
    ||||||||  |||||||||||||||||  | |||||||| ||| ||  |||||||||||||||| |||||||||||||| |||||    
T  18757837 tgacctgactatgtgtttataagtgggggcgatcctcacatcacaaggcggttttgtggggttgtgttaggcccaaccacgattt 18757921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 69 - 160
Target Start/End: Original strand, 39620320 - 39620412
Alignment:
Q  69 atgacctgataatgtgtttataagtgggaacaatcctcacttcataa-ccggttttgtggggttgagttaggcccaaccatgatttttaagat 160  Q
    ||||||||| ||||||||||||||||||   || || ||| |||||| || |||||||||||||| |||| ||||||||| ||||| ||||||    
T  39620320 atgacctgacaatgtgtttataagtgggggtaacccgcacctcataagccagttttgtggggttgtgttaagcccaaccacgatttctaagat 39620412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 79 - 153
Target Start/End: Complemental strand, 472140 - 472065
Alignment:
Q  79 aatgtgtttataagtgggaacaatcctcacttcataa-ccggttttgtggggttgagttaggcccaaccatgattt 153  Q
    ||||||||||||||||||  ||||||| || ||| || ||||||||||||||||| |||||||| ||||| |||||    
T  472140 aatgtgtttataagtgggggcaatccttacctcacaagccggttttgtggggttgtgttaggccaaaccacgattt 472065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 73 - 171
Target Start/End: Original strand, 17638233 - 17638331
Alignment:
Q  73 cctgataatgtgtttataagtgggaacaatcctcacttcataacc-ggttttgtggggttgagttaggcccaaccatgatttttaagatgatatcagagc 171  Q
    ||||| ||| ||||||||||||||  |||||||||| ||| || | ||||||| ||||||| |||||||||||||| ||||| ||||||| ||| |||||    
T  17638233 cctgacaatttgtttataagtgggg-caatcctcacctcacaagctggttttgaggggttgtgttaggcccaaccacgatttctaagatggtataagagc 17638331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 79 - 161
Target Start/End: Original strand, 31317233 - 31317315
Alignment:
Q  79 aatgtgtttataagtgggaacaatcctcacttcataa-ccggttttgtggggttgagttaggcccaaccatgatttttaagatg 161  Q
    ||||||||||||||||||  |||||||||| ||| || ||||||||||||| ||| ||||||| |||||| ||||| |||||||    
T  31317233 aatgtgtttataagtgggg-caatcctcacctcacaagccggttttgtgggattgtgttaggctcaaccacgatttctaagatg 31317315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 69 - 159
Target Start/End: Original strand, 31317460 - 31317551
Alignment:
Q  69 atgacctgataatgtgtttataagtgggaacaatcctcacttcataa-ccggttttgtggggttgagttaggcccaaccatgatttttaaga 159  Q
    ||||| ||| |||||||||||||||||| | |||| |||| ||| || ||| ||||| ||||||| |||||||||||||| ||||| |||||    
T  31317460 atgacatgacaatgtgtttataagtggggaaaatcatcacctcacaagccgattttgcggggttgtgttaggcccaaccacgatttctaaga 31317551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 80 - 158
Target Start/End: Original strand, 45828251 - 45828330
Alignment:
Q  80 atgtgtttataagtgggaacaatcctcacttcataacc-ggttttgtggggttgagttaggcccaaccatgatttttaag 158  Q
    |||||||||||||||||  |||||  ||| ||| || | ||||||||||||||| |||||||||||||||||||| ||||    
T  45828251 atgtgtttataagtgggggcaatctccacctcacaagcaggttttgtggggttgtgttaggcccaaccatgatttctaag 45828330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 99 - 160
Target Start/End: Original strand, 24866221 - 24866283
Alignment:
Q  99 caatcctcacttcataa-ccggttttgtggggttgagttaggcccaaccatgatttttaagat 160  Q
    |||||||||| ||| || ||||||||||||||||| |||||||||||||| ||||| ||||||    
T  24866221 caatcctcacctcacaagccggttttgtggggttgtgttaggcccaaccacgatttctaagat 24866283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 118 - 203
Target Start/End: Complemental strand, 26753561 - 26753476
Alignment:
Q  118 ggttttgtggggttgagttaggcccaaccatgatttttaagatgatatcagagcatcttcaagatctattgggccacctgctatca 203  Q
    ||||||||||  |||  |||| |||||||| ||||| |||||| ||||| |||||||||||||||  |||||  ||||||||||||    
T  26753561 ggttttgtggaattgtattagacccaaccacgatttctaagataatatccgagcatcttcaagattcattggatcacctgctatca 26753476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 83 - 147
Target Start/End: Complemental strand, 27670468 - 27670403
Alignment:
Q  83 tgtttataagtgggaacaatcctcacttcataa-ccggttttgtggggttgagttaggcccaacca 147  Q
    ||||||||||||||  |||||||||| ||| |  ||||||||||||||||| ||||||||||||||    
T  27670468 tgtttataagtgggggcaatcctcacctcaaaggccggttttgtggggttgtgttaggcccaacca 27670403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 116 - 223
Target Start/End: Original strand, 33640087 - 33640195
Alignment:
Q  116 ccggttttgtggggttgagttaggcccaaccatgatttttaagatgatatcagagcat-cttcaagatctattgggccacctgctatcaaatttctgcta 214  Q
    ||||||||||||| ||| ||||||||||| ||  |||| ||||||||||||||||| | || ||| |||  |||| ||||||| ||||| ||||| | ||    
T  33640087 ccggttttgtgggattgtgttaggcccaatcacaatttctaagatgatatcagagcctcctccaaaatccgttggaccacctgttatcatatttccgtta 33640186  T
Q  215 tcggaccac 223  Q
    | |||||||    
T  33640187 ttggaccac 33640195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 118 - 161
Target Start/End: Original strand, 27086634 - 27086677
Alignment:
Q  118 ggttttgtggggttgagttaggcccaaccatgatttttaagatg 161  Q
    |||||||||| |||| |||||||||||||||||||| |||||||    
T  27086634 ggttttgtggagttgtgttaggcccaaccatgatttctaagatg 27086677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 69 - 179
Target Start/End: Complemental strand, 29575980 - 29575869
Alignment:
Q  69 atgacctgataatgtgtttataagtgggaacaatcctcacttcataac-cggttttgtggggttgagttaggcccaaccatgatttttaagatgatatca 167  Q
    ||||||||| |||||||||||||||| | |||||  |||| ||| ||  ||||||  || ||||| |||||  |||||||  |||||||||||| |||||    
T  29575980 atgacctgagaatgtgtttataagtgaggacaattatcacatcacaagtcggtttgctgaggttgtgttagatccaaccacaatttttaagatggtatca 29575881  T
Q  168 gagcatcttcaa 179  Q
    |||| |||||||    
T  29575880 gagcctcttcaa 29575869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 152 - 223
Target Start/End: Complemental strand, 34659243 - 34659172
Alignment:
Q  152 ttttaagatgatatcagagcatcttcaagatctattgggccacctgctatcaaatttctgctatcggaccac 223  Q
    |||||||||| ||||||||| |||||||||||  |||| |||| |||||| || ||||  ||||||||||||    
T  34659243 ttttaagatggtatcagagcctcttcaagatccgttggaccacatgctattaagtttccactatcggaccac 34659172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 81 - 202
Target Start/End: Original strand, 39620099 - 39620221
Alignment:
Q  81 tgtgtttataagtgggaacaatcctcacttcataa-ccggttttgtggggttgagttaggcccaaccatgatttttaagatgatatcagagcatcttc-a 178  Q
    ||||||||||||||||   | ||||||||||| || |||||||||  | |||| |||| |  |||||| ||||| ||||||| ||||||||| || || |    
T  39620099 tgtgtttataagtggggt-agtcctcacttcacaagccggttttgaagagttgtgttaagttcaaccacgatttctaagatggtatcagagcctcctcca 39620197  T
Q  179 agatctattgggccacctgctatc 202  Q
    |||||| |||||||||||||||||    
T  39620198 agatctgttgggccacctgctatc 39620221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 69 - 147
Target Start/End: Original strand, 43781577 - 43781656
Alignment:
Q  69 atgacctgataatgtgtttataagtgggaacaatcctcacttcataa-ccggttttgtggggttgagttaggcccaacca 147  Q
    ||||||||| |||| ||||||||||||   |||||||||||||| ||  ||||||||| | |||| ||||||||||||||    
T  43781577 atgacctgacaatgagtttataagtggaggcaatcctcacttcacaagtcggttttgtagagttgtgttaggcccaacca 43781656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 79 - 153
Target Start/End: Complemental strand, 45138882 - 45138807
Alignment:
Q  79 aatgtgtttataagtgggaacaatcctcacttcataa-ccggttttgtggggttgagttaggcccaaccatgattt 153  Q
    ||||||||||||||||||  |||||||||| ||| || |||||||||||||||||  | || |||||||| |||||    
T  45138882 aatgtgtttataagtgggggcaatcctcacctcacaagccggttttgtggggttgtatgagacccaaccacgattt 45138807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 114 - 152
Target Start/End: Original strand, 1353488 - 1353526
Alignment:
Q  114 aaccggttttgtggggttgagttaggcccaaccatgatt 152  Q
    ||||||||||||||||||| |||||||||||||| ||||    
T  1353488 aaccggttttgtggggttgtgttaggcccaaccacgatt 1353526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 79 - 147
Target Start/End: Complemental strand, 13741182 - 13741112
Alignment:
Q  79 aatgtgtttataagtgggaac-aatcctcacttcataa-ccggttttgtggggttgagttaggcccaacca 147  Q
    |||||||||||||||||| || ||||||||| ||| || |||||||| |||||||| ||||| ||||||||    
T  13741182 aatgtgtttataagtggggacaaatcctcacctcacaagccggttttttggggttgtgttagacccaacca 13741112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 74 - 171
Target Start/End: Complemental strand, 23708309 - 23708211
Alignment:
Q  74 ctgataatgtgtttataagtgggaacaatcctcacttcataa-ccggttttgtggggttgagttaggcccaaccatgatttttaagatgatatcagagc 171  Q
    |||| ||| ||||||||||||||  |||||||||| ||| || ||||||||||| | ||| |||||| |||| ||  |||||||||||| ||| |||||    
T  23708309 ctgacaatttgtttataagtgggggcaatcctcacctcacaagccggttttgtgagattgtgttaggtccaatcacaatttttaagatggtattagagc 23708211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 74 - 171
Target Start/End: Complemental strand, 23726765 - 23726667
Alignment:
Q  74 ctgataatgtgtttataagtgggaacaatcctcacttcataa-ccggttttgtggggttgagttaggcccaaccatgatttttaagatgatatcagagc 171  Q
    |||| ||| ||||||||||||||  |||||||||| ||| || ||||||||||| | ||| |||||| |||| ||  |||||||||||| ||| |||||    
T  23726765 ctgacaatttgtttataagtgggggcaatcctcacctcacaagccggttttgtgagattgtgttaggtccaatcacaatttttaagatggtattagagc 23726667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 74 - 171
Target Start/End: Complemental strand, 23745221 - 23745123
Alignment:
Q  74 ctgataatgtgtttataagtgggaacaatcctcacttcataa-ccggttttgtggggttgagttaggcccaaccatgatttttaagatgatatcagagc 171  Q
    |||| ||| ||||||||||||||  |||||||||| ||| || ||||||||||| | ||| |||||| |||| ||  |||||||||||| ||| |||||    
T  23745221 ctgacaatttgtttataagtgggggcaatcctcacctcacaagccggttttgtgagattgtgttaggtccaatcacaatttttaagatggtattagagc 23745123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 74 - 171
Target Start/End: Complemental strand, 24063746 - 24063648
Alignment:
Q  74 ctgataatgtgtttataagtgggaacaatcctcacttcataa-ccggttttgtggggttgagttaggcccaaccatgatttttaagatgatatcagagc 171  Q
    |||| ||| ||||||||||||||  |||||||||| ||| || ||||||||||| | ||| |||||| |||| ||  |||||||||||| ||| |||||    
T  24063746 ctgacaatttgtttataagtgggggcaatcctcacctcacaagccggttttgtgagattgtgttaggtccaatcacaatttttaagatggtattagagc 24063648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 73 - 115
Target Start/End: Original strand, 30138062 - 30138104
Alignment:
Q  73 cctgataatgtgtttataagtgggaacaatcctcacttcataa 115  Q
    ||||||||||||||||||||||||  |||||||||| ||||||    
T  30138062 cctgataatgtgtttataagtgggggcaatcctcacctcataa 30138104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 73 - 115
Target Start/End: Original strand, 30147613 - 30147655
Alignment:
Q  73 cctgataatgtgtttataagtgggaacaatcctcacttcataa 115  Q
    ||||||||||||||||||||||||  |||||||||| ||||||    
T  30147613 cctgataatgtgtttataagtgggggcaatcctcacctcataa 30147655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 74 - 147
Target Start/End: Complemental strand, 38791535 - 38791461
Alignment:
Q  74 ctgataatgtgtttataagtgggaacaatcctcacttcataac-cggttttgtggggttgagttaggcccaacca 147  Q
    |||| ||||| |||||||||| | ||||||||||| ||| ||  || ||||||||||||| ||||||||||||||    
T  38791535 ctgacaatgtatttataagtgaggacaatcctcacctcacaaatcgattttgtggggttgtgttaggcccaacca 38791461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 73 - 157
Target Start/End: Complemental strand, 6487419 - 6487334
Alignment:
Q  73 cctgataatgtgtttataagtgggaacaatcctcacttcataa-ccggttttgtggggttgagttaggcccaaccatgatttttaa 157  Q
    ||||| ||| |||||||||||||    ||||||||| ||| || |||||||| ||||||||  ||||||||||||| |||||||||    
T  6487419 cctgacaatttgtttataagtggaggtaatcctcacctcacaagccggttttatggggttgttttaggcccaaccacgatttttaa 6487334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 116 - 153
Target Start/End: Complemental strand, 13574726 - 13574689
Alignment:
Q  116 ccggttttgtggggttgagttaggcccaaccatgattt 153  Q
    ||||||||||||||||| |||||||||||||| |||||    
T  13574726 ccggttttgtggggttgtgttaggcccaaccacgattt 13574689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 80 - 132
Target Start/End: Complemental strand, 27484904 - 27484851
Alignment:
Q  80 atgtgtttataagtgggaacaatcctcacttcat-aaccggttttgtggggttg 132  Q
    ||||||||||||||| || |||| ||||||| || |||||||||||||||||||    
T  27484904 atgtgtttataagtgagatcaattctcactttataaaccggttttgtggggttg 27484851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 163 - 203
Target Start/End: Complemental strand, 19954447 - 19954407
Alignment:
Q  163 tatcagagcatcttcaagatctattgggccacctgctatca 203  Q
    ||||||||| ||||||||||| ||||||||| |||||||||    
T  19954447 tatcagagcctcttcaagatccattgggccatctgctatca 19954407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 163 - 203
Target Start/End: Original strand, 24866132 - 24866172
Alignment:
Q  163 tatcagagcatcttcaagatctattgggccacctgctatca 203  Q
    ||||||||| ||||||||||  |||||||||||||||||||    
T  24866132 tatcagagcctcttcaagattcattgggccacctgctatca 24866172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 69 - 168
Target Start/End: Complemental strand, 30179798 - 30179698
Alignment:
Q  69 atgacctgataatgtgtttataagtgggaacaatcctcacttcataa-ccggttttgtggggttgagttaggcccaaccatgatttttaagatgatatca 167  Q
    ||||||||| ||||||||||||||||||   ||||||||| ||| ||  | ||||||| || ||  |||| ||||||||| ||||| ||||||| |||||    
T  30179798 atgacctgacaatgtgtttataagtgggggtaatcctcacctcacaagtcagttttgtaggattatgttatgcccaaccacgatttataagatggtatca 30179699  T
Q  168 g 168  Q
    |    
T  30179698 g 30179698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 121 - 201
Target Start/End: Complemental strand, 37246890 - 37246810
Alignment:
Q  121 tttgtggggttgagttaggcccaaccatgatttttaagatgatatcagagcatcttcaagatctattgggccacctgctat 201  Q
    ||||||| |||| ||||| | |||| ||||||||||||||| ||||| ||  | ||||||||  ||||| |||||||||||    
T  37246890 tttgtggagttgtgttagactcaacaatgatttttaagatggtatcaaagtctattcaagattcattggaccacctgctat 37246810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0519 (Bit Score: 65; Significance: 1e-28; HSPs: 2)
Name: scaffold0519
Description:

Target: scaffold0519; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 74 - 217
Target Start/End: Original strand, 1915 - 2059
Alignment:
Q  74 ctgataatgtgtttataagtgggaacaatcctcacttcataa-ccggttttgtggggttgagttaggcccaaccatgatttttaagatgatatcagagca 172  Q
    |||| ||||||||||||||||||  |||||||||| | | || ||||||||||||||||| ||||||||||||||  |||| ||||||| |||||||||     
T  1915 ctgacaatgtgtttataagtgggggcaatcctcaccttacaagccggttttgtggggttgtgttaggcccaaccaccatttctaagatggtatcagagcc 2014  T
Q  173 tcttcaagatctattgggccacctgctatcaaatttctgctatcg 217  Q
    ||| ||||||| ||||||||||||| |||||  |||| |||||||    
T  2015 tctccaagatccattgggccacctgttatcaggtttccgctatcg 2059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0519; HSP #2
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 73 - 147
Target Start/End: Original strand, 2149 - 2224
Alignment:
Q  73 cctgataatgtgtttataagtgggaacaatcctcacttcataa-ccggttttgtggggttgagttaggcccaacca 147  Q
    ||||| ||||||||||||||||||  |||||||||| | | || ||||||||||||||||| ||||||||||||||    
T  2149 cctgacaatgtgtttataagtgggggcaatcctcaccttacaagccggttttgtggggttgtgttaggcccaacca 2224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0129 (Bit Score: 63; Significance: 2e-27; HSPs: 1)
Name: scaffold0129
Description:

Target: scaffold0129; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 74 - 223
Target Start/End: Original strand, 14302 - 14452
Alignment:
Q  74 ctgataatgtgtttataagtgggaacaatcctcacttcataa-ccggttttgtggggttgagttaggcccaaccatgatttttaagatgatatcagagca 172  Q
    |||| |||||||||||||||||| |||||| |||| ||| || ||||||||||||||||| |||||||||||||| | ||| ||||||| |||||||||     
T  14302 ctgacaatgtgtttataagtggggacaatcatcacctcacaagccggttttgtggggttgtgttaggcccaaccacgttttctaagatggtatcagagcc 14401  T
Q  173 tcttcaagatctattgggccacctgctatcaaatttctgctatcggaccac 223  Q
    ||| ||||||| |||||||||  || |||||  |||| |||||||| ||||    
T  14402 tctccaagatccattgggccatatgttatcaggtttccgctatcgggccac 14452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0092 (Bit Score: 58; Significance: 2e-24; HSPs: 1)
Name: scaffold0092
Description:

Target: scaffold0092; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 79 - 203
Target Start/End: Original strand, 5659 - 5784
Alignment:
Q  79 aatgtgtttataagtgggaacaatcctcacttcataa-ccggttttgtggggttgagttaggcccaaccatgatttttaagatgatatcagagcatcttc 177  Q
    ||||||||||||||||||   ||||||||  | | || ||||||||||||||||| ||||| |||||||| ||||| ||||||| ||||||||| |||||    
T  5659 aatgtgtttataagtgggggtaatcctcatcttacaagccggttttgtggggttgtgttagacccaaccacgatttctaagatggtatcagagcctcttc 5758  T
Q  178 aagatctattgggccacctgctatca 203  Q
    || ||| |||||||||||||||||||    
T  5759 aaaatccattgggccacctgctatca 5784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0045 (Bit Score: 52; Significance: 6e-21; HSPs: 1)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 80 - 223
Target Start/End: Complemental strand, 41284 - 41141
Alignment:
Q  80 atgtgtttataagtgggaacaatcctcacttcataaccggttttgtggggttgagttaggcccaaccatgatttttaagatgatatcagagcatcttcaa 179  Q
    ||||||||||||||| | |||||||| |  |||  |||| |||||||||||||  |||||| |||| | ||||| ||||||| ||||||||| ||| |||    
T  41284 atgtgtttataagtgtggacaatcctaatctcactaccgattttgtggggttgtattaggctcaactacgatttctaagatggtatcagagcctctccaa 41185  T
Q  180 gatctattgggccacctgctatcaaatttctgctatcggaccac 223  Q
    |||  |||||||||||||||||||| |||  ||||||| |||||    
T  41184 gattcattgggccacctgctatcaagtttgcgctatcgaaccac 41141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0048 (Bit Score: 48; Significance: 1e-18; HSPs: 2)
Name: scaffold0048
Description:

Target: scaffold0048; HSP #1
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 73 - 203
Target Start/End: Original strand, 81840 - 81971
Alignment:
Q  73 cctgataatgtgtttataagtgggaacaatcctcacttcataac-cggttttgtggggttgagttaggcccaaccatgatttttaagatgatatcagagc 171  Q
    ||||| ||| |||||||||||||| |||||  |||| | | ||  |||||||||||||||| |||||||||||||| ||||| ||||||| |||||||||    
T  81840 cctgacaatatgtttataagtggggacaattttcaccttacaagtcggttttgtggggttgtgttaggcccaaccacgatttctaagatggtatcagagc 81939  T
Q  172 atcttcaagatctattgggccacctgctatca 203  Q
     ||| ||||||| ||||| | ||||| |||||    
T  81940 ctctccaagatccattggactacctgttatca 81971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0048; HSP #2
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 114 - 147
Target Start/End: Original strand, 82116 - 82149
Alignment:
Q  114 aaccggttttgtggggttgagttaggcccaacca 147  Q
    ||||||||||||||||||| ||||||||||||||    
T  82116 aaccggttttgtggggttgtgttaggcccaacca 82149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0400 (Bit Score: 45; Significance: 9e-17; HSPs: 1)
Name: scaffold0400
Description:

Target: scaffold0400; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 73 - 223
Target Start/End: Original strand, 3842 - 3994
Alignment:
Q  73 cctgataatgtgtttataagtgggaa-caatcctcacttcataa-ccggttttgtggggttgagttaggcccaaccatgatttttaagatgatatcagag 170  Q
    ||||| |||||||| |||||||||   |||||||||| ||| || || |||||||||||||| ||||||| ||||||  |||| ||| ||| |||||||     
T  3842 cctgacaatgtgttaataagtggggggcaatcctcacctcacaagccagttttgtggggttgtgttaggcacaaccacaatttctaatatggtatcagat 3941  T
Q  171 catcttcaagatctattgggccacctgctatcaaatttctgctatcggaccac 223  Q
    | ||| ||||||| | |||||||||||||||||  |||| |||||||| ||||    
T  3942 cctctccaagatccactgggccacctgctatcaggtttccgctatcgggccac 3994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0365 (Bit Score: 45; Significance: 9e-17; HSPs: 1)
Name: scaffold0365
Description:

Target: scaffold0365; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 73 - 223
Target Start/End: Original strand, 4486 - 4638
Alignment:
Q  73 cctgataatgtgtttataagtgggaa-caatcctcacttcataa-ccggttttgtggggttgagttaggcccaaccatgatttttaagatgatatcagag 170  Q
    ||||| |||||||| |||||||||   |||||||||| ||| || || |||||||||||||| ||||||| ||||||  |||| ||| ||| |||||||     
T  4486 cctgacaatgtgttaataagtggggggcaatcctcacctcacaagccagttttgtggggttgtgttaggcacaaccacaatttctaatatggtatcagat 4585  T
Q  171 catcttcaagatctattgggccacctgctatcaaatttctgctatcggaccac 223  Q
    | ||| ||||||| | |||||||||||||||||  |||| |||||||| ||||    
T  4586 cctctccaagatccactgggccacctgctatcaggtttccgctatcgggccac 4638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0334 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold0334
Description:

Target: scaffold0334; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 73 - 153
Target Start/End: Complemental strand, 4515 - 4434
Alignment:
Q  73 cctgataatgtgtttataagtgggaacaatcctcacttcataa-ccggttttgtggggttgagttaggcccaaccatgattt 153  Q
    ||||| ||| ||||||||||||||  |||||||||| ||| || ||||||||||||||||| ||||||| ||||||||||||    
T  4515 cctgacaatttgtttataagtgggggcaatcctcacctcacaagccggttttgtggggttgtgttaggctcaaccatgattt 4434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0766 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0766
Description:

Target: scaffold0766; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 74 - 153
Target Start/End: Original strand, 6273 - 6353
Alignment:
Q  74 ctgataatgtgtttataagtgggaacaatcctcacttcataa-ccggttttgtggggttgagttaggcccaaccatgattt 153  Q
    |||| ||||||||||||||||||  |||||||||| ||| || ||| ||||||||||||| |||||||||||||| |||||    
T  6273 ctgacaatgtgtttataagtgggggcaatcctcacctcacaagccgattttgtggggttgtgttaggcccaaccacgattt 6353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 2)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 116 - 203
Target Start/End: Original strand, 56501 - 56588
Alignment:
Q  116 ccggttttgtggggttgagttaggcccaaccatgatttttaagatgatatcagagcatcttcaagatctattgggccacctgctatca 203  Q
    ||||||||||||||||| |||||||||||||| ||||| ||| ||| ||||||||| ||||||  ||   |||||||||||| |||||    
T  56501 ccggttttgtggggttgtgttaggcccaaccacgatttctaatatggtatcagagcctcttcacaattctttgggccacctgttatca 56588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 74 - 159
Target Start/End: Complemental strand, 288742 - 288656
Alignment:
Q  74 ctgataatgtgtttataagtgggaacaatcctcacttcataacc-ggttttgtggggttgagttaggcccaaccatgatttttaaga 159  Q
    |||| ||||| ||||||  ||||  |||||||||| ||| || | |||||||||| |||| |||||||||||||||||||| |||||    
T  288742 ctgacaatgtatttatatctgggcgcaatcctcacctcacaagctggttttgtggagttgtgttaggcccaaccatgatttctaaga 288656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0481 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0481
Description:

Target: scaffold0481; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 70 - 171
Target Start/End: Complemental strand, 3560 - 3458
Alignment:
Q  70 tgacctgataatgtgtttataagtgggaacaatcctcacttcataa-ccggttttgtggggttgagttaggcccaaccatgatttttaagatgatatcag 168  Q
    |||| ||| ||| |||||||||||||| |||||| |||| ||| || ||||||||||||||||| ||||| ||||| || ||||| ||| ||| ||||||    
T  3560 tgacatgacaatttgtttataagtggggacaatcttcacctcacaagccggttttgtggggttgtgttagacccaatcacgatttctaatatggtatcag 3461  T
Q  169 agc 171  Q
    |||    
T  3460 agc 3458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0047 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0047
Description:

Target: scaffold0047; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 79 - 203
Target Start/End: Original strand, 12651 - 12776
Alignment:
Q  79 aatgtgtttataagtgggaacaatcctcacttcataac-cggttttgtggggttgagttaggcccaaccatgatttttaagatgatatcagagcatcttc 177  Q
    ||||| |||||| |||||  |||||||||| ||| ||  || ||||||| ||||| ||||||||||||||  |||||||||||| ||| || |  ||| |    
T  12651 aatgtatttatatgtgggggcaatcctcacctcacaagtcgattttgtgtggttgtgttaggcccaaccacaatttttaagatggtattagcgtctctcc 12750  T
Q  178 aagatctattgggccacctgctatca 203  Q
    |||||  |||||||||||| ||||||    
T  12751 aagataaattgggccacctactatca 12776  T

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Target: scaffold0542 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0542
Description:

Target: scaffold0542; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 173 - 217
Target Start/End: Original strand, 5728 - 5772
Alignment:
Q  173 tcttcaagatctattgggccacctgctatcaaatttctgctatcg 217  Q
    |||||||||||||||||| |||||||||||| ||||  |||||||    
T  5728 tcttcaagatctattgggtcacctgctatcagattttcgctatcg 5772  T

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Target: scaffold0181 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0181
Description:

Target: scaffold0181; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 100 - 159
Target Start/End: Original strand, 20964 - 21024
Alignment:
Q  100 aatcctcacttcataa-ccggttttgtggggttgagttaggcccaaccatgatttttaaga 159  Q
    ||||||||| ||| || ||||||||||||||||| |||| ||||||||| ||||| |||||    
T  20964 aatcctcacctcacaagccggttttgtggggttgtgttaagcccaaccacgatttctaaga 21024  T

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Target: scaffold0027 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 69 - 159
Target Start/End: Original strand, 121547 - 121639
Alignment:
Q  69 atgacctgataatgtgtttataagtgggaacaatcctcacttcataa-ccggttttgtggggtt-gagttaggcccaaccatgatttttaaga 159  Q
    ||||| ||| ||||||||| ||||||||  | |||||| | ||| || |||||||||||||||| | |||| ||||||||| |||||||||||    
T  121547 atgacatgacaatgtgtttgtaagtgggggccatcctcccatcacaagccggttttgtggggtttgtgttaagcccaaccacgatttttaaga 121639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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