View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF3308_low_81 (Length: 219)
Name: NF3308_low_81
Description: NF3308
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3308_low_81 |
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Alignment Details
Target: chr3 (Bit Score: 146; Significance: 4e-77; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 146; E-Value: 4e-77
Query Start/End: Original strand, 47 - 196
Target Start/End: Original strand, 1501747 - 1501896
Alignment:
| Q |
47 |
ctctttcaagttatagaatgagtgtttggatgtttattgattattttcctatatataatgataaactttttacctttttcaacattacttctcgaaggag |
146 |
Q |
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| T |
1501747 |
ctctttcaagttatagaatgagtgtttggatgtttattgattattttcctatatataatgatcaactttttacctttttcaacattacttctcgaaggag |
1501846 |
T |
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| Q |
147 |
tcttctctttgctttgacgtgacatttcaagtaagccaacacgtattagg |
196 |
Q |
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| T |
1501847 |
tcttctctttgctttgacgtgacatttcaagtaagccaacacgtattagg |
1501896 |
T |
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