View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF3313_low_21 (Length: 223)
Name: NF3313_low_21
Description: NF3313
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3313_low_21 |
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Alignment Details
Target: chr8 (Bit Score: 179; Significance: 9e-97; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 179; E-Value: 9e-97
Query Start/End: Original strand, 21 - 203
Target Start/End: Original strand, 32534724 - 32534906
Alignment:
| Q |
21 |
aatactacaagtctacaaaccatagtgctgactttctcttcaatcatcacaaataccagaaaccatagttctaactttgtgtatgttctattaagtgcaa |
120 |
Q |
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| T |
32534724 |
aatactacaagtctacaaaccatagtgctgactttctcttcaatcatcacaaataccagaaaccatagttctaactttgtgtatgttctattaagtgcaa |
32534823 |
T |
|
| Q |
121 |
atttttgaatatttgtttgtctcatactatttcagattcaattttctttttggttatcatgttatcagtacgaagttttcact |
203 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |
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| T |
32534824 |
atttttgaatatttgtttgtctcatactatttcagattcaattttctttttggttatcatgttatcagtacaaagttttcact |
32534906 |
T |
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