View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF3315_low_5 (Length: 315)

Name: NF3315_low_5
Description: NF3315
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF3315_low_5
NF3315_low_5
[»] chr1 (50 HSPs)
chr1 (18-233)||(46432297-46432520)
chr1 (18-233)||(43706735-43706957)
chr1 (29-240)||(24196254-24196473)
chr1 (29-241)||(24961945-24962165)
chr1 (29-234)||(3616798-3617011)
chr1 (18-235)||(4059603-4059828)
chr1 (18-149)||(19078006-19078137)
chr1 (18-149)||(19125896-19126027)
chr1 (20-233)||(2425225-2425445)
chr1 (18-235)||(51719203-51719426)
chr1 (18-148)||(47685194-47685324)
chr1 (18-235)||(28920737-28920957)
chr1 (21-233)||(48471947-48472165)
chr1 (29-225)||(24749805-24750010)
chr1 (20-149)||(27092935-27093064)
chr1 (52-235)||(2657627-2657817)
chr1 (26-146)||(4455131-4455252)
chr1 (60-237)||(29676075-29676260)
chr1 (16-149)||(16551722-16551856)
chr1 (27-149)||(16971942-16972065)
chr1 (51-136)||(31084726-31084811)
chr1 (46-236)||(9387692-9387889)
chr1 (60-147)||(2260501-2260589)
chr1 (60-147)||(29182123-29182210)
chr1 (65-149)||(18606811-18606896)
chr1 (108-149)||(21148070-21148111)
chr1 (180-236)||(35067050-35067106)
chr1 (180-232)||(50334719-50334771)
chr1 (180-235)||(16972101-16972156)
chr1 (176-235)||(27092851-27092910)
chr1 (180-234)||(4059521-4059575)
chr1 (27-149)||(26605367-26605487)
chr1 (184-234)||(31084615-31084665)
chr1 (70-149)||(10684884-10684965)
chr1 (70-146)||(28750372-28750448)
chr1 (176-223)||(28552315-28552363)
chr1 (180-232)||(43706655-43706707)
chr1 (180-236)||(46432213-46432269)
chr1 (180-235)||(2425474-2425529)
chr1 (176-231)||(10685008-10685063)
chr1 (179-234)||(24750019-24750074)
chr1 (60-149)||(21185297-21185385)
chr1 (77-233)||(22786031-22786194)
chr1 (180-234)||(24196512-24196566)
chr1 (184-233)||(2260378-2260427)
chr1 (180-233)||(2657513-2657566)
chr1 (180-233)||(3617049-3617102)
chr1 (180-232)||(16551645-16551697)
chr1 (176-231)||(16878931-16878987)
chr1 (180-232)||(48471864-48471916)
[»] scaffold0062 (2 HSPs)
scaffold0062 (18-235)||(49657-49882)
scaffold0062 (18-235)||(62196-62421)
[»] chr2 (35 HSPs)
chr2 (18-235)||(15700745-15700970)
chr2 (18-243)||(30714355-30714588)
chr2 (21-230)||(2986689-2986906)
chr2 (18-234)||(11175906-11176130)
chr2 (18-237)||(15735060-15735287)
chr2 (59-235)||(4587858-4588043)
chr2 (18-235)||(18537909-18538134)
chr2 (26-234)||(6763806-6764022)
chr2 (21-236)||(25298885-25299107)
chr2 (60-241)||(9051150-9051339)
chr2 (18-149)||(38716285-38716416)
chr2 (18-149)||(9787651-9787782)
chr2 (18-242)||(22191037-22191268)
chr2 (18-143)||(17368314-17368439)
chr2 (26-220)||(36464289-36464487)
chr2 (28-147)||(22387158-22387278)
chr2 (63-149)||(331804-331891)
chr2 (26-149)||(28365602-28365725)
chr2 (65-149)||(2190624-2190709)
chr2 (26-149)||(4104913-4105036)
chr2 (72-148)||(1020483-1020559)
chr2 (64-148)||(26829216-26829300)
chr2 (34-147)||(2123468-2123583)
chr2 (65-136)||(21494555-21494626)
chr2 (180-235)||(25884176-25884231)
chr2 (70-147)||(25884310-25884388)
chr2 (180-242)||(36449769-36449831)
chr2 (185-239)||(36464527-36464581)
chr2 (176-234)||(43301656-43301714)
chr2 (180-233)||(9787808-9787861)
chr2 (176-233)||(17368461-17368518)
chr2 (60-118)||(15147835-15147894)
chr2 (180-235)||(30714273-30714328)
chr2 (184-233)||(15735318-15735367)
chr2 (176-236)||(1020594-1020654)
[»] chr7 (78 HSPs)
chr7 (18-243)||(48176044-48176276)
chr7 (18-236)||(18754347-18754573)
chr7 (21-243)||(27869279-27869509)
chr7 (21-235)||(20636617-20636839)
chr7 (18-234)||(31493910-31494133)
chr7 (18-236)||(21224433-21224659)
chr7 (21-242)||(24597599-24597828)
chr7 (33-235)||(3562529-3562738)
chr7 (18-236)||(13577867-13578091)
chr7 (18-233)||(19195294-19195517)
chr7 (16-235)||(19919682-19919907)
chr7 (69-235)||(20638489-20638663)
chr7 (18-235)||(11843259-11843483)
chr7 (39-149)||(35337624-35337734)
chr7 (26-234)||(14624607-14624817)
chr7 (26-149)||(44077959-44078083)
chr7 (18-232)||(2331015-2331236)
chr7 (18-149)||(10655422-10655552)
chr7 (18-149)||(36746584-36746715)
chr7 (18-149)||(41452330-41452461)
chr7 (18-146)||(17305859-17305988)
chr7 (29-233)||(42271333-42271544)
chr7 (60-149)||(10023907-10023996)
chr7 (21-235)||(8526794-8527015)
chr7 (26-133)||(9822189-9822296)
chr7 (26-133)||(10724114-10724221)
chr7 (29-144)||(39440212-39440328)
chr7 (60-150)||(24448166-24448257)
chr7 (26-146)||(3403140-3403261)
chr7 (66-149)||(21225677-21225759)
chr7 (26-232)||(25002712-25002922)
chr7 (69-149)||(24464667-24464748)
chr7 (26-149)||(15681721-15681845)
chr7 (29-147)||(3769498-3769616)
chr7 (63-149)||(4571469-4571556)
chr7 (60-146)||(5111534-5111620)
chr7 (63-149)||(26126346-26126432)
chr7 (29-149)||(26385353-26385473)
chr7 (97-149)||(6798074-6798126)
chr7 (18-145)||(33237494-33237622)
chr7 (18-148)||(19493412-19493541)
chr7 (60-149)||(4193642-4193731)
chr7 (69-149)||(39182027-39182106)
chr7 (179-234)||(6650543-6650598)
chr7 (26-118)||(5087118-5087211)
chr7 (70-146)||(9157183-9157259)
chr7 (108-149)||(15681689-15681730)
chr7 (60-139)||(43251366-43251446)
chr7 (180-243)||(8527045-8527108)
chr7 (186-233)||(23080818-23080865)
chr7 (180-242)||(20636869-20636931)
chr7 (63-148)||(23439686-23439772)
chr7 (26-118)||(6650632-6650725)
chr7 (69-149)||(6798014-6798094)
chr7 (179-236)||(21690413-21690470)
chr7 (185-237)||(24448041-24448093)
chr7 (70-146)||(29051714-29051789)
chr7 (183-234)||(11843177-11843228)
chr7 (182-233)||(15681883-15681934)
chr7 (176-243)||(23658764-23658831)
chr7 (179-234)||(25002955-25003010)
chr7 (180-235)||(26385512-26385567)
chr7 (179-233)||(10655330-10655384)
chr7 (176-233)||(17305764-17305822)
chr7 (63-148)||(23461147-23461233)
chr7 (180-234)||(27869195-27869249)
chr7 (180-234)||(39182184-39182238)
chr7 (60-121)||(42303266-42303328)
chr7 (184-242)||(42303401-42303459)
chr7 (26-122)||(7365341-7365438)
chr7 (181-234)||(14624852-14624905)
chr7 (70-149)||(3148015-3148095)
chr7 (182-234)||(5111441-5111493)
chr7 (180-236)||(19493567-19493623)
chr7 (176-236)||(21810087-21810147)
chr7 (176-235)||(26385261-26385321)
chr7 (34-149)||(47113206-47113322)
chr7 (180-235)||(48175960-48176016)
[»] chr6 (43 HSPs)
chr6 (18-235)||(22968237-22968459)
chr6 (18-235)||(23819934-23820156)
chr6 (21-233)||(24603361-24603581)
chr6 (60-235)||(8412756-8412939)
chr6 (21-233)||(26710391-26710611)
chr6 (21-235)||(18791356-18791577)
chr6 (18-243)||(32451716-32451949)
chr6 (21-236)||(4597489-4597712)
chr6 (21-235)||(34833923-34834145)
chr6 (18-149)||(3118771-3118902)
chr6 (20-235)||(24051007-24051229)
chr6 (18-234)||(31210793-31211017)
chr6 (18-235)||(14572259-14572482)
chr6 (21-149)||(35102575-35102703)
chr6 (29-149)||(25819776-25819896)
chr6 (29-149)||(18749188-18749308)
chr6 (28-149)||(15298577-15298697)
chr6 (28-233)||(22269410-22269619)
chr6 (62-232)||(4013791-4013968)
chr6 (26-146)||(19282302-19282420)
chr6 (39-148)||(26240048-26240159)
chr6 (78-149)||(32682419-32682490)
chr6 (28-137)||(12291508-12291618)
chr6 (106-233)||(18749297-18749432)
chr6 (29-149)||(24615785-24615905)
chr6 (26-105)||(23124809-23124888)
chr6 (27-105)||(20863818-20863896)
chr6 (18-149)||(9241745-9241875)
chr6 (54-129)||(2636888-2636964)
chr6 (74-149)||(4370990-4371065)
chr6 (28-149)||(12427323-12427446)
chr6 (26-149)||(16415421-16415543)
chr6 (180-236)||(18749094-18749150)
chr6 (108-149)||(2058993-2059034)
chr6 (69-136)||(34528252-34528320)
chr6 (176-238)||(4597400-4597463)
chr6 (180-235)||(35102489-35102544)
chr6 (185-243)||(34834180-34834238)
chr6 (180-234)||(35102714-35102768)
chr6 (28-85)||(2058925-2058982)
chr6 (180-241)||(3118928-3118989)
chr6 (180-241)||(7316342-7316403)
chr6 (179-220)||(12291430-12291471)
[»] chr4 (49 HSPs)
chr4 (20-233)||(4433266-4433485)
chr4 (18-233)||(25011735-25011958)
chr4 (26-236)||(43793720-43793937)
chr4 (41-235)||(55780385-55780586)
chr4 (41-235)||(55844565-55844766)
chr4 (29-234)||(13397767-13397980)
chr4 (18-233)||(19232424-19232648)
chr4 (20-235)||(35475289-35475510)
chr4 (18-235)||(9195744-9195968)
chr4 (29-235)||(41877120-41877330)
chr4 (21-234)||(6789042-6789263)
chr4 (18-149)||(13826500-13826631)
chr4 (18-149)||(15058899-15059030)
chr4 (29-233)||(4357252-4357464)
chr4 (20-149)||(27018306-27018435)
chr4 (28-235)||(5304438-5304651)
chr4 (70-236)||(1588546-1588719)
chr4 (52-235)||(45633436-45633626)
chr4 (28-149)||(51291260-51291382)
chr4 (26-146)||(15795412-15795532)
chr4 (70-235)||(41034633-41034807)
chr4 (60-233)||(52838231-52838408)
chr4 (26-150)||(4098747-4098872)
chr4 (26-237)||(24626309-24626524)
chr4 (39-149)||(2715819-2715928)
chr4 (72-244)||(2931310-2931490)
chr4 (66-149)||(9397283-9397367)
chr4 (39-149)||(23362523-23362633)
chr4 (180-239)||(18259362-18259421)
chr4 (60-235)||(15734398-15734579)
chr4 (234-305)||(48908441-48908520)
chr4 (18-118)||(36729169-36729270)
chr4 (179-235)||(4433181-4433237)
chr4 (184-236)||(20919332-20919384)
chr4 (186-233)||(17138540-17138587)
chr4 (180-235)||(43793629-43793684)
chr4 (176-234)||(15058819-15058877)
chr4 (176-234)||(24626221-24626279)
chr4 (108-149)||(48158688-48158729)
chr4 (89-146)||(55264967-55265024)
chr4 (127-245)||(25618786-25618912)
chr4 (180-238)||(8749051-8749109)
chr4 (180-234)||(25011985-25012039)
chr4 (180-233)||(9397440-9397493)
chr4 (108-149)||(16291885-16291926)
chr4 (72-149)||(43336075-43336152)
chr4 (180-233)||(45633687-45633740)
chr4 (185-229)||(14857598-14857642)
chr4 (184-220)||(15795570-15795606)
[»] chr3 (66 HSPs)
chr3 (18-230)||(23428700-23428920)
chr3 (18-235)||(26628106-26628331)
chr3 (18-149)||(28173810-28173941)
chr3 (21-239)||(27852836-27853061)
chr3 (21-233)||(13080894-13081114)
chr3 (18-229)||(25022744-25022960)
chr3 (18-233)||(46673128-46673350)
chr3 (18-234)||(48907373-48907596)
chr3 (18-233)||(3328894-3329117)
chr3 (18-234)||(10743408-10743630)
chr3 (21-236)||(25179575-25179796)
chr3 (29-149)||(30155237-30155357)
chr3 (21-234)||(8542609-8542830)
chr3 (18-235)||(4521952-4522177)
chr3 (20-234)||(3780882-3781099)
chr3 (21-233)||(8339024-8339244)
chr3 (18-149)||(28154963-28155094)
chr3 (20-149)||(48860794-48860924)
chr3 (18-118)||(6927593-6927693)
chr3 (60-149)||(26633482-26633570)
chr3 (27-235)||(40836268-40836484)
chr3 (18-235)||(22447821-22448050)
chr3 (28-149)||(34878620-34878741)
chr3 (18-146)||(22500676-22500804)
chr3 (26-149)||(26177045-26177168)
chr3 (28-149)||(26126997-26127118)
chr3 (26-149)||(22416425-22416549)
chr3 (20-230)||(20001714-20001930)
chr3 (17-150)||(35201075-35201207)
chr3 (26-235)||(36311150-36311366)
chr3 (20-118)||(3821004-3821103)
chr3 (29-235)||(33279677-33279890)
chr3 (65-149)||(9496344-9496429)
chr3 (70-240)||(25336351-25336527)
chr3 (26-149)||(32315011-32315134)
chr3 (18-118)||(32960724-32960823)
chr3 (29-142)||(31039069-31039182)
chr3 (176-245)||(32960633-32960702)
chr3 (28-146)||(1743344-1743462)
chr3 (180-235)||(22447738-22447793)
chr3 (179-238)||(25179825-25179884)
chr3 (180-235)||(26628023-26628078)
chr3 (180-235)||(34878527-34878582)
chr3 (28-87)||(43668582-43668641)
chr3 (180-234)||(20001959-20002012)
chr3 (180-241)||(3328805-3328866)
chr3 (69-149)||(4775942-4776023)
chr3 (106-235)||(18388869-18389005)
chr3 (180-237)||(22500592-22500649)
chr3 (180-233)||(28154882-28154935)
chr3 (150-243)||(32960830-32960920)
chr3 (176-235)||(1743495-1743555)
chr3 (108-148)||(46387745-46387785)
chr3 (180-235)||(28173727-28173782)
chr3 (176-231)||(32315164-32315219)
chr3 (180-234)||(1743254-1743308)
chr3 (179-233)||(20626751-20626805)
chr3 (180-234)||(26633360-26633413)
chr3 (180-233)||(8338940-8338993)
chr3 (89-149)||(34296531-34296592)
chr3 (108-149)||(49657952-49657992)
chr3 (180-236)||(19984846-19984902)
chr3 (179-235)||(19986119-19986175)
chr3 (180-236)||(25022661-25022717)
chr3 (186-234)||(33279585-33279633)
chr3 (184-232)||(40836181-40836229)
[»] chr5 (51 HSPs)
chr5 (18-235)||(38408627-38408851)
chr5 (18-235)||(25556956-25557180)
chr5 (18-149)||(31055395-31055526)
chr5 (26-233)||(40428728-40428941)
chr5 (20-149)||(16901080-16901209)
chr5 (29-236)||(36641140-36641355)
chr5 (18-146)||(10379377-10379504)
chr5 (18-233)||(18695004-18695226)
chr5 (29-239)||(16307568-16307787)
chr5 (29-235)||(245594-245806)
chr5 (29-150)||(10293179-10293300)
chr5 (21-234)||(26639121-26639342)
chr5 (26-149)||(41663612-41663736)
chr5 (26-149)||(38476559-38476682)
chr5 (18-149)||(17825578-17825709)
chr5 (69-149)||(23765522-23765602)
chr5 (69-149)||(23815370-23815450)
chr5 (60-149)||(7187281-7187370)
chr5 (29-146)||(19169438-19169555)
chr5 (60-149)||(23040071-23040163)
chr5 (26-146)||(17704676-17704795)
chr5 (19-149)||(7835802-7835931)
chr5 (18-230)||(37961329-37961549)
chr5 (26-146)||(2373240-2373360)
chr5 (69-148)||(15885297-15885375)
chr5 (52-233)||(35302029-35302217)
chr5 (65-149)||(34125151-34125236)
chr5 (103-234)||(8645796-8645935)
chr5 (180-243)||(31648046-31648109)
chr5 (66-121)||(462885-462941)
chr5 (180-236)||(18695253-18695309)
chr5 (179-235)||(23765418-23765474)
chr5 (179-235)||(23815266-23815322)
chr5 (180-234)||(17704833-17704887)
chr5 (108-240)||(23040210-23040347)
chr5 (180-234)||(24025020-24025074)
chr5 (182-235)||(20654047-20654100)
chr5 (182-235)||(31648237-31648290)
chr5 (182-242)||(2373398-2373458)
chr5 (183-235)||(7835962-7836014)
chr5 (176-231)||(7835722-7835777)
chr5 (176-223)||(8645996-8646043)
chr5 (180-235)||(31055313-31055368)
chr5 (179-241)||(3597315-3597377)
chr5 (180-234)||(16900996-16901050)
chr5 (108-149)||(20653912-20653952)
chr5 (184-233)||(31576493-31576542)
chr5 (180-228)||(17704592-17704640)
chr5 (176-235)||(23765635-23765695)
chr5 (176-235)||(23815483-23815543)
chr5 (176-223)||(40428649-40428697)
[»] chr8 (41 HSPs)
chr8 (18-234)||(17648242-17648466)
chr8 (29-229)||(12723353-12723561)
chr8 (28-234)||(4518958-4519172)
chr8 (21-242)||(8802484-8802712)
chr8 (18-149)||(19391468-19391599)
chr8 (60-233)||(30784387-30784568)
chr8 (28-241)||(38630047-38630268)
chr8 (26-243)||(44146962-44147185)
chr8 (29-233)||(19924265-19924477)
chr8 (29-230)||(5192363-5192572)
chr8 (28-233)||(21666365-21666577)
chr8 (26-235)||(22452262-22452479)
chr8 (60-235)||(4807723-4807907)
chr8 (18-149)||(33895466-33895596)
chr8 (18-147)||(32400403-32400532)
chr8 (29-245)||(7117206-7117429)
chr8 (26-149)||(3208072-3208195)
chr8 (101-235)||(21929967-21930107)
chr8 (26-148)||(4423119-4423242)
chr8 (26-149)||(18252975-18253098)
chr8 (62-149)||(18881628-18881716)
chr8 (76-146)||(3380293-3380363)
chr8 (18-116)||(23565214-23565312)
chr8 (29-149)||(31268371-31268491)
chr8 (180-235)||(19392817-19392872)
chr8 (65-147)||(41688238-41688321)
chr8 (69-146)||(41385622-41385700)
chr8 (180-235)||(44147221-44147276)
chr8 (180-234)||(5192271-5192325)
chr8 (180-237)||(4807596-4807653)
chr8 (183-243)||(7116393-7116453)
chr8 (176-235)||(15869580-15869639)
chr8 (180-235)||(18881502-18881557)
chr8 (176-238)||(19391383-19391445)
chr8 (180-235)||(23565119-23565174)
chr8 (183-233)||(3380199-3380249)
chr8 (176-214)||(3819507-3819545)
chr8 (108-149)||(1824697-1824737)
chr8 (108-149)||(1859142-1859182)
chr8 (180-237)||(10007811-10007868)
chr8 (186-234)||(21666273-21666321)
[»] scaffold0179 (2 HSPs)
scaffold0179 (26-234)||(5739-5954)
scaffold0179 (182-236)||(5647-5701)
[»] scaffold0406 (1 HSPs)
scaffold0406 (18-233)||(1997-2214)
[»] scaffold0607 (2 HSPs)
scaffold0607 (18-237)||(2130-2355)
scaffold0607 (180-234)||(2047-2101)
[»] scaffold0267 (1 HSPs)
scaffold0267 (19-231)||(3650-3866)
[»] scaffold0025 (3 HSPs)
scaffold0025 (20-233)||(19285-19503)
scaffold0025 (60-234)||(61813-61995)
scaffold0025 (180-233)||(19532-19585)
[»] scaffold1202 (1 HSPs)
scaffold1202 (65-235)||(1902-2079)
[»] scaffold0087 (1 HSPs)
scaffold0087 (18-149)||(25045-25176)
[»] scaffold0419 (2 HSPs)
scaffold0419 (21-233)||(3044-3264)
scaffold0419 (180-233)||(2961-3014)
[»] scaffold0001 (1 HSPs)
scaffold0001 (29-235)||(142039-142252)
[»] scaffold0060 (2 HSPs)
scaffold0060 (18-149)||(66266-66397)
scaffold0060 (176-234)||(66420-66478)
[»] scaffold0150 (1 HSPs)
scaffold0150 (21-149)||(5923-6051)
[»] scaffold0002 (3 HSPs)
scaffold0002 (18-146)||(455121-455250)
scaffold0002 (64-149)||(455022-455108)
scaffold0002 (180-232)||(455279-455331)
[»] scaffold1875 (2 HSPs)
scaffold1875 (26-149)||(845-969)
scaffold1875 (180-235)||(754-809)
[»] scaffold0007 (1 HSPs)
scaffold0007 (29-122)||(250610-250703)
[»] scaffold0291 (1 HSPs)
scaffold0291 (26-149)||(10013-10136)
[»] scaffold0103 (1 HSPs)
scaffold0103 (54-129)||(3045-3121)
[»] scaffold0174 (2 HSPs)
scaffold0174 (69-149)||(29808-29888)
scaffold0174 (179-233)||(29937-29991)
[»] scaffold0014 (1 HSPs)
scaffold0014 (29-149)||(112218-112339)
[»] scaffold0171 (1 HSPs)
scaffold0171 (26-105)||(9168-9248)
[»] scaffold0683 (1 HSPs)
scaffold0683 (180-235)||(5288-5343)
[»] scaffold0064 (1 HSPs)
scaffold0064 (60-118)||(54492-54551)
[»] scaffold0024 (2 HSPs)
scaffold0024 (28-146)||(43915-44033)
scaffold0024 (180-242)||(43815-43877)
[»] scaffold0474 (1 HSPs)
scaffold0474 (26-86)||(8069-8129)


Alignment Details
Target: chr1 (Bit Score: 126; Significance: 6e-65; HSPs: 50)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 126; E-Value: 6e-65
Query Start/End: Original strand, 18 - 233
Target Start/End: Original strand, 46432297 - 46432520
Alignment:
Q  18 cctttcagcccaaaattgctaagaagatgccatatgtcctagaaaaggggtcataatcgcaactttttgttaagataacgggtcaaaaaacatatttccc 117  Q
    ||||||| ||||||||||||  ||||||||||  ||||| |||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||    
T  46432297 cctttcatcccaaaattgctcggaagatgccacgtgtcccagaaaaggggtcataatcgcaactttttgtaaagataaggggtcaaaaaacatatttccc 46432396  T
Q  118 ttatgttagggggtcaaaagagcatatttccc-------agggggtcacttttgccannnnnnnnaata-ggggccaaaatcgcaaaattttgaaactta 209  Q
    ||||||||||||||||||||||||||||||||       ||||||||||||||||||        |||| |||||||||||||||| |||||||||||||    
T  46432397 ttatgttagggggtcaaaagagcatatttccctaaacatagggggtcacttttgccattttttttaatagggggccaaaatcgcaacattttgaaactta 46432496  T
Q  210 aggggcgaaaagtggagtttagcc 233  Q
    |||||||||||||||| |||||||    
T  46432497 aggggcgaaaagtggactttagcc 46432520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 18 - 233
Target Start/End: Original strand, 43706735 - 43706957
Alignment:
Q  18 cctttcagcccaaaattgctaagaagatgccatatgtcctagaaaaggggtcataatcgcaactttttgttaagataacgggtcaaaaaacatatttccc 117  Q
    ||||||| |||||||||||| |||||||||||  |||||  ||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||    
T  43706735 cctttcatcccaaaattgctcagaagatgccacgtgtcccggaaaaggggtcataatcgcaactttttgtaaagataaggggtcaaaaaacatatttccc 43706834  T
Q  118 ttatgttagggggtcaaaagagcatatttccc-------agggggtcacttttgccannnnnnnnaata-ggggccaaaatcgcaaaattttgaaactta 209  Q
    ||||||||  ||||||||||||||||||||||       ||||||||||||||||||        |||| |||||||||||||||| ||||| ||| |||    
T  43706835 ttatgtta-tgggtcaaaagagcatatttccctaaacatagggggtcacttttgccattttttttaatagggggccaaaatcgcaacattttaaaaatta 43706933  T
Q  210 aggggcgaaaagtggagtttagcc 233  Q
     ||||| |||||||||||||||||    
T  43706934 gggggcaaaaagtggagtttagcc 43706957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 29 - 240
Target Start/End: Complemental strand, 24196473 - 24196254
Alignment:
Q  29 aaaattgctaagaagatgccatatgtcctagaaaaggggtcataatcgcaactttttgttaagataacgggtcaaaaaacatatttcccttatgttaggg 128  Q
    ||||||||| |||||| ||||  ||||| | |||||||| |||| |||||||||||||| ||||||| |||||||||| ||||||||||||||||||||     
T  24196473 aaaattgctgagaagacgccacgtgtcccaaaaaaggggccatattcgcaactttttgtaaagataaggggtcaaaaagcatatttcccttatgttagga 24196374  T
Q  129 ggtcaaaagagcatatttccc-------agggggtcacttttgccannnnnnnnaatag-gggccaaaatcgcaaaattttgaaacttaaggggcgaaaa 220  Q
    ||||||||||||||||||| |       | ||||||||||||||||        ||||| ||||||||||||||| ||||||||||||| ||||||||||    
T  24196373 ggtcaaaagagcatatttctctaaacatatggggtcacttttgccattttttttaatagagggccaaaatcgcaacattttgaaacttagggggcgaaaa 24196274  T
Q  221 gtggagtttagcctatattt 240  Q
    ||||||||||||||||||||    
T  24196273 gtggagtttagcctatattt 24196254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 29 - 241
Target Start/End: Complemental strand, 24962165 - 24961945
Alignment:
Q  29 aaaattgctaagaagatgccatatgtcctagaaaaggggtcataatcgcaactttttgttaagataacgggtcaaaaaacatatttcccttatgttaggg 128  Q
    ||||||||| |||||| ||||  ||||| | |||||||| ||||||||||||||||||| ||||||| |||||||||| ||||||||||||||||||||     
T  24962165 aaaattgctgagaagacgccacgtgtcccaaaaaaggggccataatcgcaactttttgtaaagataaggggtcaaaaagcatatttcccttatgttagga 24962066  T
Q  129 ggtcaaaagagcatatttccc-------agggggtcacttttgccannnnnnnnaata-ggggccaaaatcgcaaaattttgaaacttaaggggcgaaaa 220  Q
    |||||||||||||||||||||       ||||||||||||||||||        |||| |||||||||||| ||| |||||||||||||  |||||||||    
T  24962065 ggtcaaaagagcatatttccctaaacatagggggtcacttttgccattttttttaatagggggccaaaatcacaacattttgaaacttagagggcgaaaa 24961966  T
Q  221 gtggagtttagcctatatttt 241  Q
    ||| |||||||||||| ||||    
T  24961965 gtgaagtttagcctatttttt 24961945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 29 - 234
Target Start/End: Complemental strand, 3617011 - 3616798
Alignment:
Q  29 aaaattgctaagaagatgccatatgtcctagaaaaggggtcataatcgcaactttttgttaagataacgggtcaaaaaacatatttcccttatgttaggg 128  Q
    ||||||||| |||||| ||||  ||||| | |||||||| ||||||||||||||||||| ||||||| ||||||||||||||||||||||||||| | |     
T  3617011 aaaattgctgagaagacgccacgtgtcccaaaaaaggggccataatcgcaactttttgtaaagataaggggtcaaaaaacatatttcccttatgtgaaga 3616912  T
Q  129 ggtcaaaagagcatatttccc-------agggggtcacttttgccannnnnnnnaata-ggggccaaaatcgcaaaattttgaaacttaaggggcgaaaa 220  Q
    |||||||||||||||||||||       ||| ||||||||||||||        |||| |||||||||||||||| |||||||||||||  |||||||||    
T  3616911 ggtcaaaagagcatatttccctaaacataggaggtcacttttgccattttttttaatagggggccaaaatcgcaacattttgaaacttagagggcgaaaa 3616812  T
Q  221 gtggagtttagcct 234  Q
    ||| ||||||||||    
T  3616811 gtgaagtttagcct 3616798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 18 - 235
Target Start/End: Original strand, 4059603 - 4059828
Alignment:
Q  18 cctttcagcccaaaattgctaagaagatgccatatgtcctagaaaaggggtcataatcgcaactttttgttaagataacgggtcaaaaaacatatttccc 117  Q
    ||||||| |||||||||||| |||||| ||||  ||||| | |||| ||  ||||||||||||||||||| ||||||| |||||||||||||||||| ||    
T  4059603 cctttcatcccaaaattgctgagaagacgccacgtgtcccaaaaaatggaccataatcgcaactttttgtaaagataaggggtcaaaaaacatattttcc 4059702  T
Q  118 ttatgttagggggtcaaaagagcatatttccc-------agggggtcacttttgccannnnnnnnaata-ggggccaaaatcgcaaaattttgaaactta 209  Q
    |||||||||| |||||||||||||||||||||       || |||||||||||||||        |||| ||||| |||||||||| |||||||||||||    
T  4059703 ttatgttaggaggtcaaaagagcatatttccctaaacatagagggtcacttttgccattttttttaatagggggctaaaatcgcaacattttgaaactta 4059802  T
Q  210 aggggcgaaaagtggagtttagccta 235  Q
      |||||||||||| |||||||||||    
T  4059803 gagggcgaaaagtgaagtttagccta 4059828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 18 - 149
Target Start/End: Original strand, 19078006 - 19078137
Alignment:
Q  18 cctttcagcccaaaattgctaagaagatgccatatgtcctagaaaaggggtcataatcgcaactttttgttaagataacgggtcaaaaaacatatttccc 117  Q
    ||||||| || ||||||||| |||||| ||||  ||||| | |||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||    
T  19078006 cctttcatccaaaaattgctgagaagacgccacgtgtcccaaaaaaggggtcataatcgcaactttttgtaaagataaggggtcaaaaaacatatttccc 19078105  T
Q  118 ttatgttagggggtcaaaagagcatatttccc 149  Q
    |||||||||| |||||||||||||||||||||    
T  19078106 ttatgttaggaggtcaaaagagcatatttccc 19078137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 18 - 149
Target Start/End: Original strand, 19125896 - 19126027
Alignment:
Q  18 cctttcagcccaaaattgctaagaagatgccatatgtcctagaaaaggggtcataatcgcaactttttgttaagataacgggtcaaaaaacatatttccc 117  Q
    ||||||| || ||||||||| |||||| ||||  ||||| | |||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||    
T  19125896 cctttcatccaaaaattgctgagaagacgccacgtgtcccaaaaaaggggtcataatcgcaactttttgtaaagataaggggtcaaaaaacatatttccc 19125995  T
Q  118 ttatgttagggggtcaaaagagcatatttccc 149  Q
    |||||||||| |||||||||||||||||||||    
T  19125996 ttatgttaggaggtcaaaagagcatatttccc 19126027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 20 - 233
Target Start/End: Complemental strand, 2425445 - 2425225
Alignment:
Q  20 tttcagcccaaaattgctaagaagatgccatatgtcctagaaaaggggtcataatcgcaactttttgttaagataacgggt-caaaaaacatatttccct 118  Q
    ||||| |||||||||||| |||||||||||  ||||| |||||| ||||||||||||||||||||||| ||||||| || |  |||||||||||||||||    
T  2425445 tttcatcccaaaattgctcagaagatgccacgtgtcccagaaaatgggtcataatcgcaactttttgtaaagataagggttaaaaaaaacatatttccct 2425346  T
Q  119 tatgttagggggtcaaaagagcatatttccca-----gggggtcacttttgccannnnnnnnaata-ggggccaaaatcgcaaaattttgaaacttaagg 212  Q
    |||||||| |||||||||||||||||| || |      ||||||||||||||||        |||| |||| ||||||||||| ||||||||||||| |     
T  2425345 tatgttagagggtcaaaagagcatattccctaaacataggggtcacttttgccattttttttaatagggggtcaaaatcgcaacattttgaaacttaggt 2425246  T
Q  213 ggcgaaaagtggagtttagcc 233  Q
    ||| |||||||||||||||||    
T  2425245 ggcaaaaagtggagtttagcc 2425225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 18 - 235
Target Start/End: Original strand, 51719203 - 51719426
Alignment:
Q  18 cctttcagcccaaaattgctaagaagatgccatatgtcctagaaaaggggtcataatcgcaactttttgttaagataacgggtcaaaaaacatatttccc 117  Q
    |||||||  ||||||||||| |||||||||||  | ||  |||||||||||||||||||||||||||||| ||||||| |||| ||||||||||||| ||    
T  51719203 cctttcattccaaaattgctcagaagatgccacgtatctcagaaaaggggtcataatcgcaactttttgtaaagataaggggt-aaaaaacatattttcc 51719301  T
Q  118 ttatgttagggggtcaaaagagcatatttccc-------agggggtcacttttgccannnnnnnnaataggg-gccaaaatcgcaaaattttgaaactta 209  Q
    |||||||||||| |||||||||||||||||||       | ||||||||||||||||        ||||||| ||||||||||||| |||||||||||||    
T  51719302 ttatgttaggggatcaaaagagcatatttccctaaacataaggggtcacttttgcca-tttttttaatagggagccaaaatcgcaacattttgaaactta 51719400  T
Q  210 aggggcgaaaagtggagtttagccta 235  Q
     | | | |||||||||||||||||||    
T  51719401 ggtgacaaaaagtggagtttagccta 51719426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 18 - 148
Target Start/End: Complemental strand, 47685324 - 47685194
Alignment:
Q  18 cctttcagcccaaaattgctaagaagatgccatatgtcctagaaaaggggtcataatcgcaactttttgttaagataacgggtcaaaaaacatatttccc 117  Q
    |||||| |||||||||||||||||||| ||||  ||||||| ||||| |||||| ||||||||||||||| ||| ||| |||||||||||||||||| ||    
T  47685324 cctttcggcccaaaattgctaagaagacgccacgtgtcctaaaaaagaggtcattatcgcaactttttgtaaaggtaaggggtcaaaaaacatattttcc 47685225  T
Q  118 ttatgttagggggtcaaaagagcatatttcc 148  Q
    |||||||||||| |||||| |||||||||||    
T  47685224 ttatgttaggggatcaaaatagcatatttcc 47685194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 18 - 235
Target Start/End: Original strand, 28920737 - 28920957
Alignment:
Q  18 cctttcagcccaaaattgctaagaagatgccatatgtcctagaaaaggggtc-ataatcgcaactttttgttaagataacgggtcaaaaaacatatttcc 116  Q
    ||||||| || ||||||||| |||||| |||| |||||| | |||||||| | |||||||| ||||||||| ||||||| |||||||||| ||||||       
T  28920737 cctttcatccaaaaattgctgagaagacgccacatgtcccaaaaaagggggccataatcgccactttttgtaaagataaggggtcaaaaagcatatt--- 28920833  T
Q  117 cttatgttagggggtcaaaagagcatatttccc-------agggggtcacttttgccannnnnnnnaatagggg-ccaaaatcgcaaaattttgaaactt 208  Q
       |||||||| |||||||||||||||||||||       ||||||||||||||||||        |||||||| |||||||||||| ||||||||||||    
T  28920834 ---atgttaggaggtcaaaagagcatatttccctaaacatagggggtcacttttgccattttttttaatagggggccaaaatcgcaacattttgaaactt 28920930  T
Q  209 aaggggcgaaaagtggagtttagccta 235  Q
    | ||||||||||||| |||||||||||    
T  28920931 agggggcgaaaagtgaagtttagccta 28920957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 21 - 233
Target Start/End: Original strand, 48471947 - 48472165
Alignment:
Q  21 ttcagcccaaaattgctaagaagatgccatatgtcctagaaaaggggtcataatcgcaactttttgttaagataacgggtcaaaaaacatatttccctta 120  Q
    |||| |||||||||||| |||||| ||||  ||||| | |||||||  ||||||||||||||||||| ||||||| |||||||||| |||||||| ||||    
T  48471947 ttcatcccaaaattgctgagaagacgccacgtgtcccaaaaaagggaccataatcgcaactttttgtaaagataaggggtcaaaaagcatatttctctta 48472046  T
Q  121 tgttagggggtcaaaagagcatatttccc-------agggggtcacttttgccannnnnnnnaataggggccaaaatcgcaaaattttgaaacttaaggg 213  Q
    ||||||| |||||||||||||||||||||       ||||||||| ||||||||        |||| |||| ||||| |||| |||||||||||||  ||    
T  48472047 tgttaggaggtcaaaagagcatatttccctaaacatagggggtcaattttgccattttttttaata-gggctaaaattgcaatattttgaaacttagagg 48472145  T
Q  214 gcgaaaagtggagtttagcc 233  Q
    ||||||||||  ||||||||    
T  48472146 gcgaaaagtgatgtttagcc 48472165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 29 - 225
Target Start/End: Complemental strand, 24750010 - 24749805
Alignment:
Q  29 aaaattgctaagaagatgccatatgtcctagaaaaggggtcataatcgcaactttttgttaagataacgggtcaaaaaacatatttcccttatgttaggg 128  Q
    |||||||||||||||| ||||  ||| | | |||| ||| ||||||||||||||||||| ||||||| |||||||||| |||||||||||||||||| |     
T  24750010 aaaattgctaagaagacgccacgtgttccaaaaaatgggccataatcgcaactttttgtaaagataaggggtcaaaaagcatatttcccttatgttatga 24749911  T
Q  129 ggtcaaaagagcatatttccc-------agggggtcacttttgcca-nnnnnnnnaatag-gggccaaaatcgcaaaattttgaaacttaaggggcgaaa 219  Q
    |||||||||||||||||||||       ||||||||||||||||||         ||||| ||||||||||||||| |||||||||||||  || |||||    
T  24749910 ggtcaaaagagcatatttccctaaacatagggggtcacttttgccatttttttttaatagtgggccaaaatcgcaacattttgaaacttagaggacgaaa 24749811  T
Q  220 agtgga 225  Q
    ||||||    
T  24749810 agtgga 24749805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 20 - 149
Target Start/End: Original strand, 27092935 - 27093064
Alignment:
Q  20 tttcagcccaaaattgctaagaagatgccatatgtcctagaaaaggggtcataatcgcaactttttgttaagataacgggtcaaaaaacatatttccctt 119  Q
    ||||| |||||||||||| |||||| ||||  ||| | | |||||||| |||||| |||||||||||| ||||||| ||||||||||||||||||| | |    
T  27092935 tttcatcccaaaattgctgagaagacgccacgtgttccaaaaaaggggccataattgcaactttttgtaaagataaggggtcaaaaaacatatttcacat 27093034  T
Q  120 atgttagggggtcaaaagagcatatttccc 149  Q
    || |||||||||||||||||||||||||||    
T  27093035 atattagggggtcaaaagagcatatttccc 27093064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 52 - 235
Target Start/End: Original strand, 2657627 - 2657817
Alignment:
Q  52 tgtcctagaaaaggggtcataatcgcaactttttgttaagataacgggtcaaaaaa-catatttcccttatgttagggggtcaaaagagcatatttccc- 149  Q
    ||||||| |||| ||||||||||| |||||||||   ||||||| ||||||||| | ||||||||| |||||||||| |||||| ||||||||||||||     
T  2657627 tgtcctaaaaaaagggtcataatcacaacttttttaaaagataaggggtcaaaagagcatatttcc-ttatgttaggcggtcaatagagcatatttccct 2657725  T
Q  150 ------agggggtcacttttgccannnnnnnnaataggggccaaaatcgcaaaattttgaaacttaaggggcgaaaagtggagtttagccta 235  Q
          |||| |||||||||||||        |||||||| ||||||||||| ||||||||||||| ||||||||||||| |||||||||||    
T  2657726 aaacatagggagtcacttttgccattttttttaataggggtcaaaatcgcaatattttgaaacttagggggcgaaaagtgtagtttagccta 2657817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 26 - 146
Target Start/End: Original strand, 4455131 - 4455252
Alignment:
Q  26 cccaaaattgctaagaagatgccatatgtcctagaaaaggggtcataatcgcaactttttgttaagataacgggtcaaaaaa-catatttcccttatgtt 124  Q
    |||||||||||| ||||||||||| |||||| | ||||  || ||||||||||||||||||  |||||||  |||||||||| |||||||||||||||||    
T  4455131 cccaaaattgctgagaagatgccacatgtcccaaaaaaatggccataatcgcaactttttgagaagataagtggtcaaaaaatcatatttcccttatgtt 4455230  T
Q  125 agggggtcaaaagagcatattt 146  Q
    | ||||||||||||||||||||    
T  4455231 acggggtcaaaagagcatattt 4455252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 60 - 237
Target Start/End: Complemental strand, 29676260 - 29676075
Alignment:
Q  60 aaaaggggtcataatcgcaactttttgttaagataacgggtcaaaaaacatatttcccttatgttagggggtcaaaagagcatatttccc-------agg 152  Q
    |||||||| ||||||||||||||||| | ||||||| |||||||||| |||||||| ||||||||||| | ||| |||||||||||||||       |||    
T  29676260 aaaaggggccataatcgcaactttttataaagataaggggtcaaaaagcatatttcacttatgttaggagatcacaagagcatatttccctaaacatagg 29676161  T
Q  153 gggtcacttttgccannnnnnnnaata-ggggccaaaatcgcaaaattttgaaacttaaggggcgaaaagtggagtttagcctata 237  Q
    || |||||||||| |        |||| |||||| |||| |||| |||||||||||||  |||||||||||| |||||||||||||    
T  29676160 ggatcacttttgctattctttttaatatggggcctaaattgcaacattttgaaacttagagggcgaaaagtgaagtttagcctata 29676075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 16 - 149
Target Start/End: Original strand, 16551722 - 16551856
Alignment:
Q  16 cacctttcagcccaaaattgctaagaagatgccatatgtcctagaaaaggggtcataatcgcaactttttgttaagataacgggtcaaaa-aacatattt 114  Q
    ||||||||  |||||||||||| |||||| ||||  ||||| | || | ||| ||||||||||||||||||  ||||||| ||||||||| | |||||||    
T  16551722 cacctttcgtcccaaaattgctgagaagacgccacgtgtcccaaaacaagggccataatcgcaactttttgagaagataaggggtcaaaagatcatattt 16551821  T
Q  115 cccttatgttagggggtcaaaagagcatatttccc 149  Q
      || ||||||||||||||||||||||||||||||    
T  16551822 gtctgatgttagggggtcaaaagagcatatttccc 16551856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 27 - 149
Target Start/End: Complemental strand, 16972065 - 16971942
Alignment:
Q  27 ccaaaattgctaagaagatgccatatgtcctagaaaaggggtcataatcgcaactttttgttaagataacgggtcaaaaaa-catatttcccttatgtta 125  Q
    |||||||||||||||| | ||||| ||||| | || |||||||||||||||||  |||||  ||||||| | |||||||   ||||||||||||||||||    
T  16972065 ccaaaattgctaagaaaacgccatgtgtcccaaaataggggtcataatcgcaatattttgagaagataaagagtcaaaaggtcatatttcccttatgtta 16971966  T
Q  126 gggggtcaaaagagcatatttccc 149  Q
    ||||||| ||||||||||| ||||    
T  16971965 gggggtctaaagagcatatatccc 16971942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 51 - 136
Target Start/End: Original strand, 31084726 - 31084811
Alignment:
Q  51 atgtcctagaaaaggggtcataatcgcaactttttgttaagataacgggtcaaaaaacatatttcccttatgttagggggtcaaaa 136  Q
    |||||| | ||| ||||||||||||| |||||||||| ||||||| |||||||||| ||||||| || ||||||||||||||||||    
T  31084726 atgtcccaaaaagggggtcataatcgaaactttttgtaaagataaggggtcaaaaagcatattttccatatgttagggggtcaaaa 31084811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 46 - 236
Target Start/End: Complemental strand, 9387889 - 9387692
Alignment:
Q  46 gccatatgtcctagaaaaggggtcataatcgcaactttttgttaagataacgggtcaaaa-aacatatttcccttatgtta-gggggtcaaaagagcata 143  Q
    |||| |||||| | || ||| ||||||||||||| ||||||  ||||||| ||||||||| |  ||||||||||||||||| ||||||||||||||||||    
T  9387889 gccacatgtcccaaaacaggtgtcataatcgcaaatttttgagaagataaagggtcaaaagattatatttcccttatgttaggggggtcaaaagagcata 9387790  T
Q  144 tttcc-----ca-gggggtcacttttgccannnnnnnnaataggggccaaaatcgcaaaattttgaaacttaaggggcgaaaagtggagtttagcctat 236  Q
    |||||     || |||||| ||||||||||        ||||||||| ||||||| || |||||||||||||   ||| ||||||| ||||||||||||    
T  9387789 tttccttaaacatgggggttacttttgcca-tttttttaataggggcgaaaatcgtaatattttgaaacttagaaggcaaaaagtgcagtttagcctat 9387692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 60 - 147
Target Start/End: Original strand, 2260501 - 2260589
Alignment:
Q  60 aaaaggggtcataatcgcaactttttgttaagataacgggtcaaaaaa-catatttcccttatgttagggggtcaaaagagcatatttc 147  Q
    ||||||||||| |||||||||||||||  ||||||| |||| |||| | |||||||||||||| ||| |||||||||| ||||||||||    
T  2260501 aaaaggggtcagaatcgcaactttttgagaagataaggggttaaaatatcatatttcccttatattatggggtcaaaaaagcatatttc 2260589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 60 - 147
Target Start/End: Original strand, 29182123 - 29182210
Alignment:
Q  60 aaaaggggtcataatcgcaactttttgttaagataacgggtcaaaa-aacatatttcccttatgttagggggtcaaaagagcatatttc 147  Q
    |||| ||| ||||||||||||||| ||  ||||||| ||||||||| | |||||||||||||||||| |||||||||||||||||||||    
T  29182123 aaaatgggccataatcgcaactttatgagaagataaggggtcaaaagatcatatttcccttatgtta-ggggtcaaaagagcatatttc 29182210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 65 - 149
Target Start/End: Original strand, 18606811 - 18606896
Alignment:
Q  65 gggtcataatcgcaactttttgttaagataacgggtcaaaaaa-catatttcccttatgttagggggtcaaaagagcatatttccc 149  Q
    |||| |||||| ||||||||||  ||||||| ||||||||| | | ||||| |||||||||| |||||||||||||||||||||||    
T  18606811 gggtgataatcacaactttttgagaagataaggggtcaaaagatcgtattttccttatgttatggggtcaaaagagcatatttccc 18606896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 108 - 149
Target Start/End: Complemental strand, 21148111 - 21148070
Alignment:
Q  108 catatttcccttatgttagggggtcaaaagagcatatttccc 149  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  21148111 catatttcccttatgttagggggtcaaaagagcatatttccc 21148070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 180 - 236
Target Start/End: Original strand, 35067050 - 35067106
Alignment:
Q  180 ggggccaaaatcgcaaaattttgaaacttaaggggcgaaaagtggagtttagcctat 236  Q
    ||||||||||||||||  ||||||||||||||||| |||||||| | ||||||||||    
T  35067050 ggggccaaaatcgcaactttttgaaacttaaggggggaaaagtgcactttagcctat 35067106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 180 - 232
Target Start/End: Complemental strand, 50334771 - 50334719
Alignment:
Q  180 ggggccaaaatcgcaaaattttgaaacttaaggggcgaaaagtggagtttagc 232  Q
    ||||||||||| |||| ||||| ||||||| ||||||||||||||||||||||    
T  50334771 ggggccaaaattgcaacattttaaaacttagggggcgaaaagtggagtttagc 50334719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 180 - 235
Target Start/End: Original strand, 16972101 - 16972156
Alignment:
Q  180 ggggccaaaatcgcaaaattttgaaacttaaggggcgaaaagtggagtttagccta 235  Q
    ||||| |||||||||| ||||| ||||||| ||||||||||||| |||||||||||    
T  16972101 ggggctaaaatcgcaacattttaaaacttagggggcgaaaagtgcagtttagccta 16972156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 176 - 235
Target Start/End: Complemental strand, 27092910 - 27092851
Alignment:
Q  176 aataggggccaaaatcgcaaaattttgaaacttaaggggcgaaaagtggagtttagccta 235  Q
    ||||||||||||||||| || |||||||||| || ||||||| ||||| |||||||||||    
T  27092910 aataggggccaaaatcgtaacattttgaaacatagggggcgagaagtgcagtttagccta 27092851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 180 - 234
Target Start/End: Complemental strand, 4059575 - 4059521
Alignment:
Q  180 ggggccaaaatcgcaaaattttgaaacttaaggggcgaaaagtggagtttagcct 234  Q
    |||||||||||||||| |||||||||| || ||||||||||||| | ||||||||    
T  4059575 ggggccaaaatcgcaacattttgaaacatagggggcgaaaagtgcactttagcct 4059521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 27 - 149
Target Start/End: Original strand, 26605367 - 26605487
Alignment:
Q  27 ccaaaattgctaagaagatgccatatgtcctagaaaaggggtcataatcgcaactttttgttaagataacgggtcaaaaaacatatttcccttatgttag 126  Q
    |||||||||||||||||| || |  ||||| | ||||  | ||||||||| |||||||||| || ||||    ||||||||||||||| | |||||||||    
T  26605367 ccaaaattgctaagaagacgctacgtgtcccaaaaaatcgatcataatcgtaactttttgtaaaaataagatatcaaaaaacatattttc-ttatgttag 26605465  T
Q  127 ggggtcaaaagagcatatttccc 149  Q
    ||| |||||| ||||||||||||    
T  26605466 ggg-tcaaaatagcatatttccc 26605487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 184 - 234
Target Start/End: Complemental strand, 31084665 - 31084615
Alignment:
Q  184 ccaaaatcgcaaaattttgaaacttaaggggcgaaaagtggagtttagcct 234  Q
    |||||||||||| ||||| ||||||||| ||||||||||| ||||||||||    
T  31084665 ccaaaatcgcaatattttaaaacttaagaggcgaaaagtgtagtttagcct 31084615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 70 - 149
Target Start/End: Complemental strand, 10684965 - 10684884
Alignment:
Q  70 ataatcgcaactttttgttaagataacgggtcaaaa-aacatatttcccttatgtta-gggggtcaaaagagcatatttccc 149  Q
    |||||||||||||||||  ||||||| ||||||||| | |||||||  ||||||||| ||||||||| |||| |||||||||    
T  10684965 ataatcgcaactttttgagaagataaggggtcaaaagatcatatttttcttatgttaggggggtcaatagagtatatttccc 10684884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 70 - 146
Target Start/End: Complemental strand, 28750448 - 28750372
Alignment:
Q  70 ataatcgcaactttttgttaagataacgggtcaaaaaacatatttccc-ttatgttagggggtcaaaagagcatattt 146  Q
    |||||||||||||||  | |||||||  || |||||||||| |||||| ||||||||| |||||||||||||||||||    
T  28750448 ataatcgcaactttta-taaagataagaggccaaaaaacatttttccccttatgttagagggtcaaaagagcatattt 28750372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 176 - 223
Target Start/End: Complemental strand, 28552363 - 28552315
Alignment:
Q  176 aatagggg-ccaaaatcgcaaaattttgaaacttaaggggcgaaaagtg 223  Q
    |||||||| |||||||||||| ||||||||||||| |||||||||||||    
T  28552363 aataggggaccaaaatcgcaacattttgaaacttagggggcgaaaagtg 28552315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 180 - 232
Target Start/End: Complemental strand, 43706707 - 43706655
Alignment:
Q  180 ggggccaaaatcgcaaaattttgaaacttaaggggcgaaaagtggagtttagc 232  Q
    |||||||||||||||| ||| |||||| || ||||||||||||| ||||||||    
T  43706707 ggggccaaaatcgcaacattatgaaacatagggggcgaaaagtgcagtttagc 43706655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 180 - 236
Target Start/End: Complemental strand, 46432269 - 46432213
Alignment:
Q  180 ggggccaaaatcgcaaaattttgaaacttaaggggcgaaaagtggagtttagcctat 236  Q
    |||||||||||||||| ||| |||||| || ||||||||||||| | ||||||||||    
T  46432269 ggggccaaaatcgcaacattatgaaacatagggggcgaaaagtgcactttagcctat 46432213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 180 - 235
Target Start/End: Original strand, 2425474 - 2425529
Alignment:
Q  180 ggggccaaaatcgcaaaattttgaaacttaaggggcgaaaagtggagtttagccta 235  Q
    |||||||||||||||| ||| |||||| || ||||| ||||||| |||||||||||    
T  2425474 ggggccaaaatcgcaacattatgaaacatagggggcaaaaagtgcagtttagccta 2425529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 176 - 231
Target Start/End: Original strand, 10685008 - 10685063
Alignment:
Q  176 aataggggccaaaatcgcaaaattttgaaacttaaggggcgaaaagtggagtttag 231  Q
    |||||||||||||||  ||| ||||||||||||| |||||||||| || |||||||    
T  10685008 aataggggccaaaattacaatattttgaaacttagggggcgaaaaatgcagtttag 10685063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 179 - 234
Target Start/End: Original strand, 24750019 - 24750074
Alignment:
Q  179 aggggccaaaatcgcaaaattttgaaacttaaggggcgaaaagtggagtttagcct 234  Q
    |||||||||||| |||| ||||| |||| || ||||||||||||| ||||||||||    
T  24750019 aggggccaaaattgcaacattttaaaacatagggggcgaaaagtgcagtttagcct 24750074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 60 - 149
Target Start/End: Complemental strand, 21185385 - 21185297
Alignment:
Q  60 aaaaggggtcataatcgcaactttttgttaagataacgggtcaaaa-aacatatttcccttatgttagggggtcaaaagagcatatttccc 149  Q
    |||| ||||||||||||||||||||||  ||||||  ||||||||| | |||||||  |||||||||  ||||||||||| ||||||||||    
T  21185385 aaaaagggtcataatcgcaactttttgagaagatagggggtcaaaagatcatattt-tcttatgtta-agggtcaaaagaacatatttccc 21185297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 77 - 233
Target Start/End: Complemental strand, 22786194 - 22786031
Alignment:
Q  77 caactttttgttaagataacgggtcaaaaaa-catatttcccttatgttagggggtcaaaagagcatatttccc-------agggggtcacttttgccan 168  Q
    ||||||||||  ||||||| ||||||||| | |||||||| ||||||||||  | |||||||||||||||||||        |||| ||||||||||||     
T  22786194 caactttttgagaagataaggggtcaaaagatcatatttcacttatgttagatg-tcaaaagagcatatttccctaaacatgggggctcacttttgccat 22786096  T
Q  169 nnnnnnnaataggggccaaaatcgcaaaattttgaaacttaaggggcgaaaagtggagtttagcc 233  Q
           |||||||| ||||||||||| ||||| ||||||| | ||| ||| ||| |||||||||    
T  22786095 tttttttaataggggtcaaaatcgcaacattttaaaacttaggaggcaaaaggtgcagtttagcc 22786031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 180 - 234
Target Start/End: Original strand, 24196512 - 24196566
Alignment:
Q  180 ggggccaaaatcgcaaaattttgaaacttaaggggcgaaaagtggagtttagcct 234  Q
    |||||||||||||||| ||||| |||| || | ||||||||||| ||||||||||    
T  24196512 ggggccaaaatcgcaacattttaaaacataggaggcgaaaagtgcagtttagcct 24196566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 184 - 233
Target Start/End: Complemental strand, 2260427 - 2260378
Alignment:
Q  184 ccaaaatcgcaaaattttgaaacttaaggggcgaaaagtggagtttagcc 233  Q
    |||||||||||| ||||| ||||||||||| ||||||||| | |||||||    
T  2260427 ccaaaatcgcaacattttaaaacttaagggtcgaaaagtgcactttagcc 2260378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 180 - 233
Target Start/End: Complemental strand, 2657566 - 2657513
Alignment:
Q  180 ggggccaaaatcgcaaaattttgaaacttaaggggcgaaaagtggagtttagcc 233  Q
    ||||| |||||||||| ||||| |||||||| |||||||||||| |||| ||||    
T  2657566 ggggctaaaatcgcaacattttaaaacttaaagggcgaaaagtgaagttaagcc 2657513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 180 - 233
Target Start/End: Original strand, 3617049 - 3617102
Alignment:
Q  180 ggggccaaaatcgcaaaattttgaaacttaaggggcgaaaagtggagtttagcc 233  Q
    ||||| ||||| |||| |||||||||| || ||||||||||||| |||||||||    
T  3617049 ggggcgaaaattgcaacattttgaaacatagggggcgaaaagtgaagtttagcc 3617102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 180 - 232
Target Start/End: Complemental strand, 16551697 - 16551645
Alignment:
Q  180 ggggccaaaatcgcaaaattttgaaacttaaggggcgaaaagtggagtttagc 232  Q
    ||||||||||| |||| |||||||||||||  |||||||||||| || |||||    
T  16551697 ggggccaaaattgcaacattttgaaacttagagggcgaaaagtgcagattagc 16551645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 176 - 231
Target Start/End: Original strand, 16878931 - 16878987
Alignment:
Q  176 aatagggg-ccaaaatcgcaaaattttgaaacttaaggggcgaaaagtggagtttag 231  Q
    |||||||| |||||||| ||| ||||||||||||| | ||||||||||| |||||||    
T  16878931 aataggggaccaaaatctcaacattttgaaacttaggtggcgaaaagtgcagtttag 16878987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 180 - 232
Target Start/End: Complemental strand, 48471916 - 48471864
Alignment:
Q  180 ggggccaaaatcgcaaaattttgaaacttaaggggcgaaaagtggagtttagc 232  Q
    |||||||||||||||| |||||||||| || ||| ||||||||| | ||||||    
T  48471916 ggggccaaaatcgcaacattttgaaacataggggacgaaaagtgcactttagc 48471864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0062 (Bit Score: 124; Significance: 9e-64; HSPs: 2)
Name: scaffold0062
Description:

Target: scaffold0062; HSP #1
Raw Score: 124; E-Value: 9e-64
Query Start/End: Original strand, 18 - 235
Target Start/End: Complemental strand, 49882 - 49657
Alignment:
Q  18 cctttcagcccaaaattgctaagaagatgccatatgtcctagaaaaggggtcataatcgcaactttttgttaagataacgggtcaaaaaacatatttccc 117  Q
    ||||||| |||||||||||| |||||||||||  ||||| |||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||    
T  49882 cctttcatcccaaaattgctcagaagatgccacgtgtcccagaaaaggggtcataatcgcaactttttgtaaagataaggggtcaaaaaacatatttccc 49783  T
Q  118 ttatgttagggggtcaaaagagcatatttccc-------agggggtcacttttgccannnnnnnnaatagggg-ccaaaatcgcaaaattttgaaactta 209  Q
    ||||||||||||||||||||||||||||||||       |||||||||||| |||||        |||||||| |||||||||||| ||||| |||||||    
T  49782 ttatgttagggggtcaaaagagcatatttcccgaaacatagggggtcacttgtgccattttttttaataggggtccaaaatcgcaacattttaaaactta 49683  T
Q  210 aggggcgaaaagtggagtttagccta 235  Q
    |||||||||||||||| |||||||||    
T  49682 aggggcgaaaagtggactttagccta 49657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0062; HSP #2
Raw Score: 124; E-Value: 9e-64
Query Start/End: Original strand, 18 - 235
Target Start/End: Complemental strand, 62421 - 62196
Alignment:
Q  18 cctttcagcccaaaattgctaagaagatgccatatgtcctagaaaaggggtcataatcgcaactttttgttaagataacgggtcaaaaaacatatttccc 117  Q
    ||||||| |||||||||||| |||||||||||  ||||| |||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||    
T  62421 cctttcatcccaaaattgctcagaagatgccacgtgtcccagaaaaggggtcataatcgcaactttttgtaaagataaggggtcaaaaaacatatttccc 62322  T
Q  118 ttatgttagggggtcaaaagagcatatttccc-------agggggtcacttttgccannnnnnnnaatagggg-ccaaaatcgcaaaattttgaaactta 209  Q
    ||||||||||||||||||||||||||||||||       |||||||||||| |||||        |||||||| |||||||||||| ||||| |||||||    
T  62321 ttatgttagggggtcaaaagagcatatttcccgaaacatagggggtcacttgtgccattttttttaataggggtccaaaatcgcaacattttaaaactta 62222  T
Q  210 aggggcgaaaagtggagtttagccta 235  Q
    |||||||||||||||| |||||||||    
T  62221 aggggcgaaaagtggactttagccta 62196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 124; Significance: 9e-64; HSPs: 35)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 124; E-Value: 9e-64
Query Start/End: Original strand, 18 - 235
Target Start/End: Complemental strand, 15700970 - 15700745
Alignment:
Q  18 cctttcagcccaaaattgctaagaagatgccatatgtcctagaaaaggggtcataatcgcaactttttgttaagataacgggtcaaaaaacatatttccc 117  Q
    ||||||| |||||||||||| |||||||||||  ||||| |||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||    
T  15700970 cctttcatcccaaaattgctcagaagatgccacgtgtcccagaaaaggggtcataatcgcaactttttgtaaagataaggggtcaaaaaacatatttccc 15700871  T
Q  118 ttatgttagggggtcaaaagagcatatttccc-------agggggtcacttttgccannnnnnnnaatagggg-ccaaaatcgcaaaattttgaaactta 209  Q
    ||||||||||||||||||||||||||||||||       |||||||||||| |||||        |||||||| |||||||||||| ||||| |||||||    
T  15700870 ttatgttagggggtcaaaagagcatatttcccgaaacatagggggtcacttgtgccattttttttaataggggtccaaaatcgcaacattttaaaactta 15700771  T
Q  210 aggggcgaaaagtggagtttagccta 235  Q
    |||||||||||||||| |||||||||    
T  15700770 aggggcgaaaagtggactttagccta 15700745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 104; E-Value: 8e-52
Query Start/End: Original strand, 18 - 243
Target Start/End: Original strand, 30714355 - 30714588
Alignment:
Q  18 cctttcagcccaaaattgctaagaagatgccatatgtcctagaaaaggggtcataatcgcaactttttgttaagataacgggtcaaaaaacatatttccc 117  Q
    ||||||| |||||||||||| |||||| |||| |||||| | |||||||| ||||||| ||||||||||| |||||||||||||||||| ||||||||||    
T  30714355 cctttcatcccaaaattgctgagaagacgccacatgtcccaaaaaaggggccataatcacaactttttgtaaagataacgggtcaaaaagcatatttccc 30714454  T
Q  118 ttatgttagggggtcaaaagagcatatttccc-------agggggtcacttttgccannnnnnnnaata-ggggccaaaatcgcaaaattttgaaactta 209  Q
    |||||||||| |||||||||||||||||||||       ||||||||||||||||||        |||| ||||||||||| |||| ||||| ||| |||    
T  30714455 ttatgttaggaggtcaaaagagcatatttcccgaaacatagggggtcacttttgccattttttttaatagggggccaaaattgcaacattttaaaattta 30714554  T
Q  210 aggggcgaaaagtggagtttagcctatattttat 243  Q
      |||||||||||| |||||||||||||||||||    
T  30714555 gagggcgaaaagtgaagtttagcctatattttat 30714588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 21 - 230
Target Start/End: Complemental strand, 2986906 - 2986689
Alignment:
Q  21 ttcagcccaaaattgctaagaagatgccatatgtcctagaaaaggggtcataatcgcaactttttgttaagataacgggtcaaaaaacatatttccctta 120  Q
    |||| |||||||||||| |||||| ||||| ||||| | |||||||| ||||||||||||||||||| ||||||| |||||||||| |||||||||||||    
T  2986906 ttcatcccaaaattgctgagaagacgccatgtgtccaaaaaaaggggccataatcgcaactttttgtaaagataaggggtcaaaaagcatatttccctta 2986807  T
Q  121 tgttagggggtcaaaagagcatatttccc-------agggggtcacttttgccannnnnnnnaata-ggggccaaaatcgcaaaattttgaaacttaagg 212  Q
    ||||||| |||||||||||||||||||||       ||||||||||||||| ||        |||| |||||||||||||||| |||||||||||||| |    
T  2986806 tgttaggaggtcaaaagagcatatttccctaaacatagggggtcacttttgtcattttttttaatagggggccaaaatcgcaacattttgaaacttaaag 2986707  T
Q  213 ggcgaaaagtggagttta 230  Q
    ||||||||||| ||||||    
T  2986706 ggcgaaaagtgaagttta 2986689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 99; E-Value: 7e-49
Query Start/End: Original strand, 18 - 234
Target Start/End: Complemental strand, 11176130 - 11175906
Alignment:
Q  18 cctttcagcccaaaattgctaagaagatgccatatgtcctagaaaaggggtcataatcgcaactttttgttaagataacgggtcaaaaaacatatttccc 117  Q
    ||||||| |||||||||||| |||||| ||||  ||||| | |||||||| ||||||| ||||||||||| ||||||| |||||||||| ||||||||||    
T  11176130 cctttcatcccaaaattgctgagaagacgccacgtgtcccaaaaaaggggccataatcacaactttttgtaaagataaggggtcaaaaagcatatttccc 11176031  T
Q  118 ttatgttagggggtcaaaagagcatatttccc-------agggggtcacttttgccannnnnnnnaata-ggggccaaaatcgcaaaattttgaaactta 209  Q
    |||||||||| |||||||||||||||||||||       ||||||||||||||||||        |||| |||||||||||||||| |||||||||||||    
T  11176030 ttatgttaggaggtcaaaagagcatatttccctaaacatagggggtcacttttgccattttttttaatagggggccaaaatcgcaacattttgaaactta 11175931  T
Q  210 aggggcgaaaagtggagtttagcct 234  Q
      |||||||||||| ||||||||||    
T  11175930 gagggcgaaaagtgaagtttagcct 11175906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 18 - 237
Target Start/End: Complemental strand, 15735287 - 15735060
Alignment:
Q  18 cctttcagcccaaaattgctaagaagatgccatatgtcctagaaaaggggtcataatcgcaactttttgttaagataacgggtcaaaaaacatatttccc 117  Q
    ||||||| |||||||||| | |||||| ||||  ||||| | |||||||| ||||||||||||||||||| ||||||| ||||||||| |||||||||||    
T  15735287 cctttcatcccaaaattgttgagaagacgccacgtgtcccaaaaaaggggccataatcgcaactttttgtaaagataaggggtcaaaatacatatttccc 15735188  T
Q  118 ttatgttagggggtcaaaagagcatatttccc-------agggggtcacttttgccannnnnnnnaatagggg-ccaaaatcgcaaaattttgaaactta 209  Q
    |||||||| | |||||||||||||||||||||       ||||||||||||||||||        |||||||| |||||||||||| |||||||||||||    
T  15735187 ttatgttacgaggtcaaaagagcatatttcccaaaacatagggggtcacttttgccatttcttttaataggggaccaaaatcgcaacattttgaaactta 15735088  T
Q  210 aggggcgaaaagtggagtttagcctata 237  Q
      |||||||||||| |||||||||||||    
T  15735087 gagggcgaaaagtgaagtttagcctata 15735060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 59 - 235
Target Start/End: Complemental strand, 4588043 - 4587858
Alignment:
Q  59 gaaaaggggtcataatcgcaactttttgttaagataacgggtcaaaaaacatatttcccttatgttagggggtcaaaagagcatatttccc-------ag 151  Q
    ||||||||||||||||||||||||||||| ||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||       ||    
T  4588043 gaaaaggggtcataatcgcaactttttgtaaagataaggggttaaaaaacatatttcccttatgttagggggtcaaaagagcatatttccctaaacatag 4587944  T
Q  152 ggggtcacttttgcca-nnnnnnnnaata-ggggccaaaatcgcaaaattttgaaacttaaggggcgaaaagtggagtttagccta 235  Q
    ||||||||||||||||         |||| |||||||||||||||| ||||||||||||| |||||||||||||| ||||||||||    
T  4587943 ggggtcacttttgccatttttttttaatagggggccaaaatcgcaacattttgaaacttagggggcgaaaagtggtgtttagccta 4587858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 18 - 235
Target Start/End: Original strand, 18537909 - 18538134
Alignment:
Q  18 cctttcagcccaaaattgctaagaagatgccatatgtcctagaaaaggggtcataatcgcaactttttgttaagataacgggtcaaaaaacatatttccc 117  Q
    ||||||| || ||||||||| |||||| ||||  ||||| | |||||||| |||||| |||||||||||| ||||||| |||||||||| ||||||||||    
T  18537909 cctttcatccaaaaattgctgagaagacgccacgtgtcccaaaaaaggggccataattgcaactttttgtaaagataaggggtcaaaaagcatatttccc 18538008  T
Q  118 ttatgttagggggtcaaaagagcatatttccc-------agggggtcacttttgccannnnnnnnaata-ggggccaaaatcgcaaaattttgaaactta 209  Q
    | |||||| | |||||||| ||||||||||||       ||||||||||||||||||        |||| |||||||||||||||| |||||||||||||    
T  18538009 taatgttatgaggtcaaaaaagcatatttccctaaacatagggggtcacttttgccattttttttaatagggggccaaaatcgcaacattttgaaactta 18538108  T
Q  210 aggggcgaaaagtggagtttagccta 235  Q
      |||||||||||| |||||||||||    
T  18538109 gagggcgaaaagtgaagtttagccta 18538134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 26 - 234
Target Start/End: Original strand, 6763806 - 6764022
Alignment:
Q  26 cccaaaattgctaagaagatgccatatgtcctagaaaaggggtcataatcgcaactttttgttaagataacgggtcaaaaaacatatttcccttatgtta 125  Q
    |||||||||||| |||||| ||||  ||||| | |||||||| | ||||||| ||||||||| ||||||| |||||||||| ||||||| ||||||||||    
T  6763806 cccaaaattgctgagaagacgccacgtgtcccaaaaaaggggccgtaatcgctactttttgtaaagataaggggtcaaaaagcatattttccttatgtta 6763905  T
Q  126 gggggtcaaaagagcatatttccc-------agggggtcacttttgccannnnnnnnaatagggg-ccaaaatcgcaaaattttgaaacttaaggggcga 217  Q
    || |||||||||||||||||||||       ||||||||||||||||||        |||||||| |||||||||||| |||||||||||||  ||||||    
T  6763906 ggaggtcaaaagagcatatttccctaaacatagggggtcacttttgccattttttttaataggggaccaaaatcgcaacattttgaaacttagagggcga 6764005  T
Q  218 aaagtggagtttagcct 234  Q
    ||| || ||||||||||    
T  6764006 aaaatgaagtttagcct 6764022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 21 - 236
Target Start/End: Original strand, 25298885 - 25299107
Alignment:
Q  21 ttcagcccaaaattgctaagaagatgccatatgtcctagaaaaggggtcataatcgcaactttttgttaagataacgggtcaaaaaacatatttccctta 120  Q
    |||| |||||||||| | |||||||||||  ||||| | |||||||| ||||||||||||||||||| ||||||| || ||||||||||||||||| |||    
T  25298885 ttcatcccaaaattgttgagaagatgccacgtgtcccaaaaaaggggccataatcgcaactttttgtaaagataagggatcaaaaaacatatttccttta 25298984  T
Q  121 tgttagggggtcaaaagagcatatttccc-------agggggtcacttttgccannnnnnnnaataggggccaaaatcgcaaaattttgaaacttaaggg 213  Q
    ||||| | |||||||||||||||||||||       ||||||||||||||||||        |   ||||| |||||||||| |||||||||||||  ||    
T  25298985 tgttaagaggtcaaaagagcatatttccctaaacatagggggtcacttttgccatttttttaatagggggctaaaatcgcaacattttgaaacttagagg 25299084  T
Q  214 gcgaaaagtggagtttagcctat 236  Q
    ||||||| || ||||||||||||    
T  25299085 gcgaaaattgaagtttagcctat 25299107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 60 - 241
Target Start/End: Original strand, 9051150 - 9051339
Alignment:
Q  60 aaaaggggtcataatcgcaactttttgttaagataacgggtcaaaaaacatatttcccttatgttagggggtcaaaagagcatatttccc-------agg 152  Q
    |||| ||| ||||||||||||||||||| |||||||  ||||||||| |||||||||||||||||||| |||||||||||||||||||||       |||    
T  9051150 aaaaagggccataatcgcaactttttgtaaagataagaggtcaaaaagcatatttcccttatgttaggaggtcaaaagagcatatttccctaaacatagg 9051249  T
Q  153 gggtcacttttgccannnnnnnnaata-ggggccaaaatcgcaaaattttgaaacttaaggggcgaaaagtggagtttagcctatatttt 241  Q
    | |||||||||||||        |||| |||| ||||||||||| ||||| |||||||  |||||||||||| |||||||||||||||||    
T  9051250 gagtcacttttgccattttttttaatagggggtcaaaatcgcaacattttaaaacttagagggcgaaaagtgaagtttagcctatatttt 9051339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 18 - 149
Target Start/End: Complemental strand, 38716416 - 38716285
Alignment:
Q  18 cctttcagcccaaaattgctaagaagatgccatatgtcctagaaaaggggtcataatcgcaactttttgttaagataacgggtcaaaaaacatatttccc 117  Q
    ||||||| || ||||||||| |||||| ||||  ||||| | |||||||| ||||||||||||||||||| ||||||| |||||||||| |||||||| |    
T  38716416 cctttcatccaaaaattgctgagaagacgccacgtgtcccaaaaaaggggccataatcgcaactttttgtaaagataaggggtcaaaaagcatatttctc 38716317  T
Q  118 ttatgttagggggtcaaaagagcatatttccc 149  Q
    |||||||||| |||||||||||||||||||||    
T  38716316 ttatgttaggaggtcaaaagagcatatttccc 38716285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 18 - 149
Target Start/End: Complemental strand, 9787782 - 9787651
Alignment:
Q  18 cctttcagcccaaaattgctaagaagatgccatatgtcctagaaaaggggtcataatcgcaactttttgttaagataacgggtcaaaaaacatatttccc 117  Q
    ||||||| || ||||||||| |||||| ||||  ||||| | |||||||| |||||||| |||||||||| ||||||| |||||||||| ||||||||||    
T  9787782 cctttcatccaaaaattgctgagaagacgccacgtgtcccaaaaaaggggccataatcgtaactttttgtaaagataaggggtcaaaaagcatatttccc 9787683  T
Q  118 ttatgttagggggtcaaaagagcatatttccc 149  Q
    |||||||||  |||||||||||||||||||||    
T  9787682 ttatgttagcaggtcaaaagagcatatttccc 9787651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 18 - 242
Target Start/End: Complemental strand, 22191268 - 22191037
Alignment:
Q  18 cctttcagcccaaaattgctaagaagatgccatatgtcctagaaaaggggtcataatcgcaactttttgttaagataacgggtcaaaaaacatatttccc 117  Q
    ||||||| |||||||||||| |||||  ||||  ||||| | ||||||| ||||||||| |||||||||| ||||||| |||||||||  ||||||||||    
T  22191268 cctttcatcccaaaattgctgagaaggcgccacgtgtcccaaaaaaggg-tcataatcgtaactttttgtaaagataaggggtcaaaaggcatatttccc 22191170  T
Q  118 ttatgttagggggtcaaaagagcatatttccc-------agggggtcacttttgccannnnnnnnaata-ggggccaaaatcgcaaaattttgaaactta 209  Q
    ||||||||||  ||||||||||||||||||||       ||||||||||||||||||         ||| ||||||||||| |||| ||||| |||| ||    
T  22191169 ttatgttaggaagtcaaaagagcatatttccctaaacatagggggtcacttttgccattttttttgatagggggccaaaattgcaacattttaaaacata 22191070  T
Q  210 aggggcgaaaagtggagtttagcctatatttta 242  Q
     ||| ||||||||| ||||||||||| ||||||    
T  22191069 ggggacgaaaagtgtagtttagcctaaatttta 22191037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 18 - 143
Target Start/End: Complemental strand, 17368439 - 17368314
Alignment:
Q  18 cctttcagcccaaaattgctaagaagatgccatatgtcctagaaaaggggtcataatcgcaactttttgttaagataacgggtcaaaaaacatatttccc 117  Q
    ||||||| || |||| || | |||||| ||||  ||||| | |||||||| |||||| |||||||||||| ||||||| |||||||||| ||||||||||    
T  17368439 cctttcatccaaaaaatgttgagaagacgccacgtgtcccaaaaaaggggccataattgcaactttttgtaaagataaggggtcaaaaagcatatttccc 17368340  T
Q  118 ttatgttagggggtcaaaagagcata 143  Q
    |||||||||| |||||||||||||||    
T  17368339 ttatgttaggaggtcaaaagagcata 17368314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 26 - 220
Target Start/End: Complemental strand, 36464487 - 36464289
Alignment:
Q  26 cccaaaattgctaagaagatgccatatgtcctagaaaaggggtcataatcgcaactttttgttaagataacgggtcaaaaaac-atatttcccttatgtt 124  Q
    |||||||||||| |||||||| ||  ||||  | |||||||| |||| |||||||||||||  ||||||| | ||||||| |  ||||||||||||||||    
T  36464487 cccaaaattgctgagaagatgtcacgtgtctcaaaaaaggggccata-tcgcaactttttgagaagataaggagtcaaaagattatatttcccttatgtt 36464389  T
Q  125 agggggtcaaaagagcatatttcc-----cagggggtcacttttgccannnnnnnnaataggggccaaaatcgcaaaattttgaaacttaaggggcgaaa 219  Q
    |||||||||||||| |||||||||     || ||||||||||||||||        |||||||| ||||||||||| ||||| |||||||||||||||||    
T  36464388 agggggtcaaaagatcatatttccctaaacatggggtcacttttgcca-ttttttaaataggggtcaaaatcgcaacattttaaaacttaaggggcgaaa 36464290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 28 - 147
Target Start/End: Original strand, 22387158 - 22387278
Alignment:
Q  28 caaaattgctaagaagatgccatatgtcctagaaaaggggtc-ataatcgcaactttttgttaagataacgggtcaaaaaacatatttcccttatgttag 126  Q
    |||||||||| |||||| ||||  ||||| | |||||||| | |||||| ||||| |||||  |||||| ||||||||||||||||||| | ||||||||    
T  22387158 caaaattgctgagaagacgccacttgtcccaaaaaagggggccataatcacaactctttgtatagataaggggtcaaaaaacatatttctcatatgttag 22387257  T
Q  127 ggggtcaaaagagcatatttc 147  Q
    |||||||||||||||||||||    
T  22387258 ggggtcaaaagagcatatttc 22387278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 63 - 149
Target Start/End: Complemental strand, 331891 - 331804
Alignment:
Q  63 aggggtcataatcgcaactttttgttaagataacgggtcaaaaaa-catatttcccttatgttagggggtcaaaagagcatatttccc 149  Q
    ||||||||||||||||||||||||  ||||||| || |||||||| ||||||||||||| ||||| ||||||||||||||||||||||    
T  331891 aggggtcataatcgcaactttttgcaaagataatggatcaaaaaagcatatttcccttaagttagagggtcaaaagagcatatttccc 331804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 26 - 149
Target Start/End: Complemental strand, 28365725 - 28365602
Alignment:
Q  26 cccaaaattgctaagaagatgccatatgtcctagaaaaggggtcataatcgcaactttttgttaagataacgggtcaaaa-aacatatttcccttatgtt 124  Q
    |||||||||||| |||||| |||||  |||| | |||| ||||||||||||||||||||||  ||||||| |||| |||| | ||||||||||| |||||    
T  28365725 cccaaaattgctgagaagacgccatgcgtcccaaaaaaagggtcataatcgcaactttttgagaagataaggggttaaaagatcatatttccctcatgtt 28365626  T
Q  125 agggggtcaaaagagcatatttccc 149  Q
    | ||||||||| |||||||||||||    
T  28365625 a-ggggtcaaacgagcatatttccc 28365602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 65 - 149
Target Start/End: Complemental strand, 2190709 - 2190624
Alignment:
Q  65 gggtcataatcgcaactttttgttaagataacgggtcaaaaaa-catatttcccttatgttagggggtcaaaagagcatatttccc 149  Q
    ||||||||| ||||||||||||| ||||||| ||| ||||  | ||||||| ||||| ||||| ||||||||||||||||||||||    
T  2190709 gggtcataaccgcaactttttgtaaagataaggggccaaacgagcatattttccttaagttagagggtcaaaagagcatatttccc 2190624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 26 - 149
Target Start/End: Original strand, 4104913 - 4105036
Alignment:
Q  26 cccaaaattgctaagaagatgccatatgt-cctagaaaaggggtcataatcgcaactttttgttaagataacgggtcaaaa-aacatatttcccttatgt 123  Q
    |||||||||||| |||||| ||||  ||| |||| |||||||||||||||||||||||||||| || |||| | ||||||| | |||||| |||||||||    
T  4104913 cccaaaattgctgagaagacgccacgtgttccta-aaaaggggtcataatcgcaactttttgtaaatataaggtgtcaaaagagcatattccccttatgt 4105011  T
Q  124 tagggggtcaaaagagcatatttccc 149  Q
    || | ||||||||||  |||||||||    
T  4105012 ta-gaggtcaaaagaatatatttccc 4105036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 72 - 148
Target Start/End: Complemental strand, 1020559 - 1020483
Alignment:
Q  72 aatcgcaactttttgttaagataacgggtcaaaaaacatatttcccttatgttagggggtcaaaagagcatatttcc 148  Q
    |||| ||||||||||  ||||||| ||| |||||| |||||||| |||||||||| ||||||||| |||||||||||    
T  1020559 aatcacaactttttgaaaagataaagggacaaaaatcatatttctcttatgttagagggtcaaaatagcatatttcc 1020483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 64 - 148
Target Start/End: Original strand, 26829216 - 26829300
Alignment:
Q  64 ggggtcataatcgcaactttttgttaagataacgggtcaaaaaa-catatttcccttatgttagggggtcaaaagagcatatttcc 148  Q
    |||| ||||||| ||||||||||  | ||||| ||||||||| | |||||||||||||||||| |||||| |||||||||||||||    
T  26829216 ggggccataatcacaactttttgagatgataaggggtcaaaagatcatatttcccttatgtta-ggggtccaaagagcatatttcc 26829300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 34 - 147
Target Start/End: Complemental strand, 2123583 - 2123468
Alignment:
Q  34 tgctaagaagatgccatatgtcctagaaaaggg-gtcataatcgcaactttttgttaagataacgggtcaaaa-aacatatttcccttatgttagggggt 131  Q
    |||| |||||| |||| |||||| | || |||| |||| ||| |||||||||||| ||||||| ||||||||| ||| ||||||||| | | ||| || |    
T  2123583 tgctgagaagacgccacatgtcccaaaacagggtgtcaaaattgcaactttttgtaaagataaagggtcaaaagaacttatttccctaaagatagaggat 2123484  T
Q  132 caaaagagcatatttc 147  Q
    ||||||||||||||||    
T  2123483 caaaagagcatatttc 2123468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 65 - 136
Target Start/End: Complemental strand, 21494626 - 21494555
Alignment:
Q  65 gggtcataatcgcaactttttgttaagataacgggtcaaaaaacatatttcccttatgttagggggtcaaaa 136  Q
    ||||||||| ||||||||||||| |||||||  |  ||||||||||||||| ||| |||||| |||||||||    
T  21494626 gggtcataaacgcaactttttgtaaagataagagaacaaaaaacatatttctcttctgttagagggtcaaaa 21494555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 180 - 235
Target Start/End: Complemental strand, 25884231 - 25884176
Alignment:
Q  180 ggggccaaaatcgcaaaattttgaaacttaaggggcgaaaagtggagtttagccta 235  Q
    |||||||||||||||| ||||| ||||||| ||||||||| ||| |||||||||||    
T  25884231 ggggccaaaatcgcaacattttaaaacttagggggcgaaatgtgcagtttagccta 25884176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 70 - 147
Target Start/End: Original strand, 25884310 - 25884388
Alignment:
Q  70 ataatcgcaactttttgttaagataacgggtcaaaaaa-catatttcccttatgttagggggtcaaaagagcatatttc 147  Q
    |||||||||||||||||  ||||||| |||| |||| | |||||||||||||||||||||| | |||| | ||||||||    
T  25884310 ataatcgcaactttttgagaagataaggggttaaaatatcatatttcccttatgttaggggattaaaataacatatttc 25884388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 180 - 242
Target Start/End: Complemental strand, 36449831 - 36449769
Alignment:
Q  180 ggggccaaaatcgcaaaattttgaaacttaaggggcgaaaagtggagtttagcctatatttta 242  Q
    ||||||||||| ||||  |||||||| |||||||| |||||||| | ||||||||||||||||    
T  36449831 ggggccaaaattgcaagtttttgaaagttaaggggggaaaagtgcactttagcctatatttta 36449769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 185 - 239
Target Start/End: Original strand, 36464527 - 36464581
Alignment:
Q  185 caaaatcgcaaaattttgaaacttaaggggcgaaaagtggagtttagcctatatt 239  Q
    ||||||||||| ||||||||||||| | ||||||||||| |||||| ||||||||    
T  36464527 caaaatcgcaacattttgaaacttaggaggcgaaaagtgcagtttaacctatatt 36464581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 176 - 234
Target Start/End: Complemental strand, 43301714 - 43301656
Alignment:
Q  176 aataggggccaaaatcgcaaaattttgaaacttaaggggcgaaaagtggagtttagcct 234  Q
    ||||| |||||||||||||| |||| |||||||||| |||||||| || ||||||||||    
T  43301714 aatagaggccaaaatcgcaacatttcgaaacttaagaggcgaaaaatgcagtttagcct 43301656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 180 - 233
Target Start/End: Original strand, 9787808 - 9787861
Alignment:
Q  180 ggggccaaaatcgcaaaattttgaaacttaaggggcgaaaagtggagtttagcc 233  Q
    ||||||||||| |||| |||||||||| || ||||||||||||| |||||||||    
T  9787808 ggggccaaaattgcaatattttgaaacatagggggcgaaaagtgtagtttagcc 9787861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 176 - 233
Target Start/End: Original strand, 17368461 - 17368518
Alignment:
Q  176 aataggggccaaaatcgcaaaattttgaaacttaaggggcgaaaagtggagtttagcc 233  Q
    ||||||||||||||| |||| |||||||||| || |||||||||||||  ||||||||    
T  17368461 aataggggccaaaattgcaacattttgaaacatagggggcgaaaagtgttgtttagcc 17368518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 60 - 118
Target Start/End: Complemental strand, 15147894 - 15147835
Alignment:
Q  60 aaaaggggtcataatcgcaactttttgttaagataacgggtcaaaa-aacatatttccct 118  Q
    ||||||||  |||||||||||||||||||||||||| || |||||| | |||||||||||    
T  15147894 aaaaggggctataatcgcaactttttgttaagataatggatcaaaagagcatatttccct 15147835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 180 - 235
Target Start/End: Complemental strand, 30714328 - 30714273
Alignment:
Q  180 ggggccaaaatcgcaaaattttgaaacttaaggggcgaaaagtggagtttagccta 235  Q
    |||||||||||||||| ||||| |||| || ||||||||||||| | |||||||||    
T  30714328 ggggccaaaatcgcaacattttaaaacatagggggcgaaaagtgcactttagccta 30714273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 184 - 233
Target Start/End: Original strand, 15735318 - 15735367
Alignment:
Q  184 ccaaaatcgcaaaattttgaaacttaaggggcgaaaagtggagtttagcc 233  Q
    ||||||| |||| ||||| |||| || |||||||||||||||||||||||    
T  15735318 ccaaaattgcaacattttaaaacatagggggcgaaaagtggagtttagcc 15735367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 176 - 236
Target Start/End: Original strand, 1020594 - 1020654
Alignment:
Q  176 aataggggccaaaatcgcaaaattttgaaacttaaggggcgaaaagtggagtttagcctat 236  Q
    ||||||| |||||||| ||| ||||| ||||||||||  | ||||||| ||||||||||||    
T  1020594 aatagggaccaaaatcacaacattttaaaacttaaggatctaaaagtgcagtttagcctat 1020654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 120; Significance: 2e-61; HSPs: 78)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 18 - 243
Target Start/End: Original strand, 48176044 - 48176276
Alignment:
Q  18 cctttcagcccaaaattgctaagaagatgccatatgtcctagaaaaggggtcataatcgcaactttttgttaagataacgggtcaaaaaacatatttccc 117  Q
    ||||||| |||||||||||| |||||||||||  ||||| |||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||    
T  48176044 cctttcatcccaaaattgctcagaagatgccacgtgtcccagaaaaggggtcataatcgcaactttttgtaaagataaggggtcaaaaaacatatttccc 48176143  T
Q  118 ttatgttagggggtcaaaagagcatatttccc-------agggggtcacttttgccannnnnnnnaata-ggggccaaaatcgcaaaattttgaaactta 209  Q
    |||||||| |||||||||||||||||||||||       |||| || ||||||||||        |||| |||||||||||||||| |||||||||||||    
T  48176144 ttatgtta-ggggtcaaaagagcatatttccctaaacatagggagttacttttgccattttttttaatagggggccaaaatcgcaacattttgaaactta 48176242  T
Q  210 aggggcgaaaagtggagtttagcctatattttat 243  Q
     |||||||||||| ||||||||||||||||||||    
T  48176243 gggggcgaaaagtagagtttagcctatattttat 48176276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 18 - 236
Target Start/End: Original strand, 18754347 - 18754573
Alignment:
Q  18 cctttcagcccaaaattgctaagaagatgccatatgtcctagaaaaggggtcataatcgcaactttttgttaagataacgggtcaaaaaacatatttccc 117  Q
    ||||||| |||||||||| | ||||||| |||  ||||| |||||| | |||||||||||||| |||||| ||||||| |||||||||||||||||||||    
T  18754347 cctttcatcccaaaattgatcagaagataccacgtgtcccagaaaatgtgtcataatcgcaacattttgtaaagataaggggtcaaaaaacatatttccc 18754446  T
Q  118 ttatgttagggggtcaaaagagcatatttccc-------agggggtcacttttgccannnnnnnnaatagggg-ccaaaatcgcaaaattttgaaactta 209  Q
    ||||||||||||||||||||||||||||||||       || || ||||||||||||        |||||||| |||||||||||| |||||||||||||    
T  18754447 ttatgttagggggtcaaaagagcatatttccctaaacatagaggatcacttttgccattttttttaataggggaccaaaatcgcaacattttgaaactta 18754546  T
Q  210 aggggcgaaaagtggagtttagcctat 236  Q
     |||||||||||||||||||| |||||    
T  18754547 gggggcgaaaagtggagtttaacctat 18754573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 21 - 243
Target Start/End: Original strand, 27869279 - 27869509
Alignment:
Q  21 ttcagcccaaaattgctaagaagatgccatatgtcctagaaaaggggtcataatcgcaactttttgttaagataacgggtcaaaaaacatatttccctta 120  Q
    |||| |||||||||||| |||||| ||||| ||||| | |||||||| ||||||||||||||||||| ||||||| |||||||||| |||||||||||||    
T  27869279 ttcatcccaaaattgctgagaagacgccatgtgtcccaaaaaaggggccataatcgcaactttttgtaaagataaggggtcaaaaagcatatttccctta 27869378  T
Q  121 tgttagggggtcaaaagagcatatttccc-------agggggtcacttttgccannnnnnnnaataggg-gccaaaatcgcaaaattttgaaacttaagg 212  Q
    ||||||| |||||||||||||||||||||       ||||||||||||||||||        |||||||  |||||||||||| |||||||||||||  |    
T  27869379 tgttaggaggtcaaaagagcatatttccctaaacatagggggtcacttttgccattttttttaatagggctccaaaatcgcaacattttgaaacttagag 27869478  T
Q  213 ggcgaaaagtggagtttagcctatattttat 243  Q
    ||||||||||| |||||| |||||| |||||    
T  27869479 ggcgaaaagtgaagtttaacctataatttat 27869509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 21 - 235
Target Start/End: Complemental strand, 20636839 - 20636617
Alignment:
Q  21 ttcagcccaaaattgctaagaagatgccatatgtcctagaaaaggggtcataatcgcaactttttgttaagataacgggtcaaaaaacatatttccctta 120  Q
    |||| |||||||||||| |||| | ||||  ||||| | |||||||||||||||||||||||||||| ||||||| |||||||||| |||||||||||||    
T  20636839 ttcatcccaaaattgctgagaaaacgccacgtgtcccaaaaaaggggtcataatcgcaactttttgtaaagataaggggtcaaaaagcatatttccctta 20636740  T
Q  121 tgttagggggtcaaaagagcatatttccc-------agggggtcacttttgccannnnnnnnaata-ggggccaaaatcgcaaaattttgaaacttaagg 212  Q
    ||||||| |||||||||||||||||||||       ||||||||||||||||||        |||| |||||||||||||||| ||||| |||||||  |    
T  20636739 tgttaggaggtcaaaagagcatatttccctaaacatagggggtcacttttgccattttttttaatagggggccaaaatcgcaacattttaaaacttagag 20636640  T
Q  213 ggcgaaaagtggagtttagccta 235  Q
    ||| ||||||| |||||||||||    
T  20636639 ggcaaaaagtgaagtttagccta 20636617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 18 - 234
Target Start/End: Complemental strand, 31494133 - 31493910
Alignment:
Q  18 cctttcagcccaaaattgctaagaagatgccatatgtcctagaaaaggggtcataatcgcaactttttgttaagataacgggtcaaaaaacatatttccc 117  Q
    ||||||| || ||||||||| |||||| ||||  ||| | | |||||||| ||||||||||||||||||| ||||||| |||||||||| ||||||| ||    
T  31494133 cctttcatcctaaaattgctgagaagacgccacgtgttccaaaaaaggggccataatcgcaactttttgtaaagataaggggtcaaaaagcatattttcc 31494034  T
Q  118 ttatgttagggggtcaaaagagcatatttccc------agggggtcacttttgccannnnnnnnaata-ggggccaaaatcgcaaaattttgaaacttaa 210  Q
    ||||||||| ||||||||||||||||||||||        ||||||||||||||||        |||| ||||||||||||| || |||||||||||||     
T  31494033 ttatgttagagggtcaaaagagcatatttccctaaacataggggtcacttttgccatttttgttaatagggggccaaaatcgtaacattttgaaacttag 31493934  T
Q  211 ggggcgaaaagtggagtttagcct 234  Q
    ||| ||||||||||||||||||||    
T  31493933 gggccgaaaagtggagtttagcct 31493910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 18 - 236
Target Start/End: Original strand, 21224433 - 21224659
Alignment:
Q  18 cctttcagcccaaaattgctaagaagatgccatatgtcctagaaaaggggtcataatcgcaactttttgttaagataacgggtcaaaaaacatatttccc 117  Q
    ||||||| || ||||||||| |||||| ||||  ||||  | |||| ||| ||||||||||||||||||| ||||||| |||||||||| ||||||||||    
T  21224433 cctttcatccaaaaattgctgagaagacgccacgtgtctcaaaaaaagggccataatcgcaactttttgtaaagataaggggtcaaaaagcatatttccc 21224532  T
Q  118 ttatgttagggggtcaaaagagcatatttccc-------agggggtcacttttgccannnnnnnnaata-ggggccaaaatcgcaaaattttgaaactta 209  Q
    |||||||||| |||||||||||||||||||||       |||||||||||||||||         || | |||| ||||||||||| |||||||||||||    
T  21224533 ttatgttaggaggtcaaaagagcatatttccctaaacatagggggtcacttttgcctttttttttaacagggggtcaaaatcgcaacattttgaaactta 21224632  T
Q  210 aggggcgaaaagtggagtttagcctat 236  Q
      |||||||||||| ||||||||||||    
T  21224633 gagggcgaaaagtgaagtttagcctat 21224659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 21 - 242
Target Start/End: Original strand, 24597599 - 24597828
Alignment:
Q  21 ttcagcccaaaattgctaagaagatgccatatgtcctagaaaaggggtcataatcgcaactttttgttaagataacgggtcaaaaaacatatttccctta 120  Q
    |||| |||||||||||| |||||| ||||  ||||  | | |||||| ||||||||||||||||||| |||| || ||||||||||||||||||||||||    
T  24597599 ttcatcccaaaattgctgagaagacgccacgtgtctcaaacaaggggccataatcgcaactttttgtaaagagaaggggtcaaaaaacatatttccctta 24597698  T
Q  121 tgttagggggtcaaaagagcatatttccc-------agggggtcacttttgccannnnnnnnaata-ggggccaaaatcgcaaaattttgaaacttaagg 212  Q
    ||||||| |||||||||||||||||||||       ||||||| ||||||||||        |||| |||| ||||||||||| ||||| |||||||  |    
T  24597699 tgttaggaggtcaaaagagcatatttccctaaacatagggggttacttttgccattttttttaatagggggacaaaatcgcaacattttaaaacttagag 24597798  T
Q  213 ggcgaaaagtggagtttagcctatatttta 242  Q
    ||||||||||| ||||||||| | ||||||    
T  24597799 ggcgaaaagtgaagtttagccaaaatttta 24597828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 33 - 235
Target Start/End: Original strand, 3562529 - 3562738
Alignment:
Q  33 ttgctaagaagatgccatatgtcctagaaaaggggtcataatcgcaactttttgttaagataacgggtcaaaaaacatatttcccttatgttagggggtc 132  Q
    ||||| |||||| ||||  ||||||| |||||||| ||||||||||||||||||| ||||||| |||||||||| |||||||||||||||||||| ||||    
T  3562529 ttgctgagaagacgccacgtgtcctaaaaaaggggccataatcgcaactttttgtaaagataaggggtcaaaaagcatatttcccttatgttaggaggtc 3562628  T
Q  133 aaaagagcatatttccc------agggggtcacttttgccannnnnnnnaata-ggggccaaaatcgcaaaattttgaaacttaaggggcgaaaagtgga 225  Q
    |||||||||||||||||        ||||||||||||||||        |||| ||||||||||||| || |||||||||||||  || ||||||||| |    
T  3562629 aaaagagcatatttccctaaacataggggtcacttttgccattttttttaatagggggccaaaatcgtaacattttgaaacttagaggacgaaaagtgaa 3562728  T
Q  226 gtttagccta 235  Q
    ||||| ||||    
T  3562729 gtttaaccta 3562738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 18 - 236
Target Start/End: Original strand, 13577867 - 13578091
Alignment:
Q  18 cctttcagcccaaaattgctaagaagatgccatatgtcctagaaaaggggtcataatcgcaactttttgttaagataacgggtcaaaaaacatatttccc 117  Q
    ||||||| |||||||||||| |||||| ||||  ||| | | |||||||| ||||||  |||||||||||  |||||| |||||||||| ||||||||||    
T  13577867 cctttcatcccaaaattgctgagaagacgccacgtgttccaaaaaaggggccataatttcaactttttgtatagataaagggtcaaaaagcatatttccc 13577966  T
Q  118 ttatgttagggggtcaaaagagcatatttcc-----ca-gggggtcacttttgccannnnnnnnaatag-gggccaaaatcgcaaaattttgaaacttaa 210  Q
    |||||||| ||||||||||||||||||||||     ||  ||||||||||||||||        ||||| ||| ||||||||||| |||||||||||||     
T  13577967 ttatgtta-ggggtcaaaagagcatatttccttaaacataggggtcacttttgccattttttttaatagagggtcaaaatcgcaacattttgaaacttag 13578065  T
Q  211 ggggcgaaaagtggagtttagcctat 236  Q
    |||||||||||| |||||||||||||    
T  13578066 ggggcgaaaagtagagtttagcctat 13578091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 18 - 233
Target Start/End: Original strand, 19195294 - 19195517
Alignment:
Q  18 cctttcagcccaaaattgctaagaagatgccatatgtcctagaaaaggggtcataatcgcaactttttgttaagataacgggtcaaaaaacatatttccc 117  Q
    ||||||| || ||||||| | |||||| |||| |||||| | |||||||| ||||||| ||||||||||| ||||||| |||||||||||||||||||||    
T  19195294 cctttcatccaaaaattgttgagaagacgccacatgtcccaaaaaaggggccataatcacaactttttgtaaagataaggggtcaaaaaacatatttccc 19195393  T
Q  118 ttatgttagggggtcaaaagagcatatttccc-------agggggtcacttttgccannnnnnnnaata-ggggccaaaatcgcaaaattttgaaactta 209  Q
    |||||||||| |||||||||||| ||||||||       ||||||||||||||||||        |||| |||| |||||| |||| ||||| |||||||    
T  19195394 ttatgttaggaggtcaaaagagcgtatttccctaaacatagggggtcacttttgccattttttttaatagggggtcaaaattgcaacattttaaaactta 19195493  T
Q  210 aggggcgaaaagtggagtttagcc 233  Q
      ||| |||||||| |||||||||    
T  19195494 gagggtgaaaagtgaagtttagcc 19195517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 16 - 235
Target Start/End: Original strand, 19919682 - 19919907
Alignment:
Q  16 cacctttcagcccaaaattgctaagaagatgccatatgtcctagaaaaggggtcataatcgcaactttttgttaagataacgggtcaaaaaacatatttc 115  Q
    |||| |||| |||||||||||| |||| | || |  ||||| | ||||||||  |||||| ||||||||||| ||||||| ||||||||||||||||||     
T  19919682 cacccttcatcccaaaattgctgagaaaacgctacgtgtcccaaaaaaggggctataatcacaactttttgtaaagataaggggtcaaaaaacatatttt 19919781  T
Q  116 ccttatgttagggggtcaaaagagcatatttccca-----gggggtcacttttgccannnnnnnnaata-ggggccaaaatcgcaaaattttgaaactta 209  Q
    |||||||||||| |||||||||||||||||||| |     ||||||||||||||||         |||| |||| ||||||||||| |||||||||||||    
T  19919782 ccttatgttaggaggtcaaaagagcatatttcctaaacatgggggtcacttttgcctttttttttaatagggggtcaaaatcgcaacattttgaaactta 19919881  T
Q  210 aggggcgaaaagtggagtttagccta 235  Q
      |||||||||||| |||||||||||    
T  19919882 gagggcgaaaagtgaagtttagccta 19919907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 69 - 235
Target Start/End: Complemental strand, 20638663 - 20638489
Alignment:
Q  69 cataatcgcaactttttgttaagataacgggtcaaaaaacatatttcccttatgttagggggtcaaaagagcatatttccc-------agggggtcactt 161  Q
    ||||||||||||||||||| ||||||| |||||||||| |||||||||||||||||||| |||||||||||||||||||||       ||||||||||||    
T  20638663 cataatcgcaactttttgtaaagataaggggtcaaaaagcatatttcccttatgttaggaggtcaaaagagcatatttccctaaacatagggggtcactt 20638564  T
Q  162 ttgccannnnnnnnaata-ggggccaaaatcgcaaaattttgaaacttaaggggcgaaaagtggagtttagccta 235  Q
    ||||||        |||| |||||||||||||||| ||||| |||||||  |||| ||||||| |||||||||||    
T  20638563 ttgccattttttttaatagggggccaaaatcgcaacattttaaaacttagagggcaaaaagtgaagtttagccta 20638489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 18 - 235
Target Start/End: Original strand, 11843259 - 11843483
Alignment:
Q  18 cctttcagcccaaaattgctaagaagatgccatatgtcctagaaaaggggtcataatcgcaactttttgttaagataacgggtcaaaaaacatatttccc 117  Q
    ||||||| |||||||||||| |||||| ||||  | | | | |||||||| |||||| |||||||||||| | ||||| |||||||||| ||||||| ||    
T  11843259 cctttcatcccaaaattgctgagaagacgccacgtattcaaaaaaaggggccataattgcaactttttgtaaggataaggggtcaaaaagcatattttcc 11843358  T
Q  118 ttatgttagggggtcaaaagagcatatttccc-------agggggtcacttttgccannnnnnnnaata-ggggccaaaatcgcaaaattttgaaactta 209  Q
    |||||||| |||||||||||||||||||||||       ||| ||||||||||||||        |||| |||| ||||||||||| |||||||||||||    
T  11843359 ttatgtta-ggggtcaaaagagcatatttccctaaacataggaggtcacttttgccattttttttaatagggggtcaaaatcgcaacattttgaaactta 11843457  T
Q  210 aggggcgaaaagtggagtttagccta 235  Q
    ||| ||||||||| ||||||||||||    
T  11843458 aggagcgaaaagtagagtttagccta 11843483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 39 - 149
Target Start/End: Original strand, 35337624 - 35337734
Alignment:
Q  39 agaagatgccatatgtcctagaaaaggggtcataatcgcaactttttgttaagataacgggtcaaaaaacatatttcccttatgttagggggtcaaaaga 138  Q
    |||||| ||||  ||||| | |||||||||||||||||||||||||||| ||||||| |||||||||| |||||||||||||||||||| ||||||||||    
T  35337624 agaagacgccacgtgtcccaaaaaaggggtcataatcgcaactttttgtaaagataaggggtcaaaaagcatatttcccttatgttaggaggtcaaaaga 35337723  T
Q  139 gcatatttccc 149  Q
    |||||||||||    
T  35337724 gcatatttccc 35337734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 26 - 234
Target Start/End: Complemental strand, 14624817 - 14624607
Alignment:
Q  26 cccaaaattgctaagaagatgccatatgtcctagaaaaggggtcataatcgcaactttttgttaagataacgggtcaaaaaacatatttcccttatgtta 125  Q
    |||||||||||| |||| ||||||  ||||| | |||||||| |||||| |||||||||||| ||||||| ||||||||||  |||||||||||||||||    
T  14624817 cccaaaattgctgagaacatgccacgtgtcccaaaaaaggggccataattgcaactttttgtaaagataaagggtcaaaaagtatatttcccttatgtta 14624718  T
Q  126 gggggtcaaaagagcatatttcc-----cagggggtcacttttgccannnnnnnnaataggggccaaaatcgcaaaattttgaaacttaaggggcgaaaa 220  Q
      ||||||||||||||||||| |     ||  |||| ||||||||||        |||||||||||||||||||| ||||||||||||| ||| ||||||    
T  14624717 -tgggtcaaaagagcatattttcctaaacattgggttacttttgcca--ttttttaataggggccaaaatcgcaatattttgaaacttaggggacgaaaa 14624621  T
Q  221 gtggagtttagcct 234  Q
    ||| ||||||||||    
T  14624620 gtgtagtttagcct 14624607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 26 - 149
Target Start/End: Original strand, 44077959 - 44078083
Alignment:
Q  26 cccaaaattgctaagaagatgccatatgtcctagaaaaggggtcataatcgcaacttttt-gttaagataacgggtcaaaaaacatatttcccttatgtt 124  Q
    ||||||||||||||||||| ||||| ||||| | ||| |  ||||||||||||||||||| || ||||||| ||||||||||||||||||| ||||||||    
T  44077959 cccaaaattgctaagaagacgccatgtgtcccaaaaaggatgtcataatcgcaacttttttgtaaagataaggggtcaaaaaacatatttctcttatgtt 44078058  T
Q  125 agggggtcaaaagagcatatttccc 149  Q
    ||| |||||||||||||||||||||    
T  44078059 aggaggtcaaaagagcatatttccc 44078083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 18 - 232
Target Start/End: Complemental strand, 2331236 - 2331015
Alignment:
Q  18 cctttcagcccaaaattgctaagaagatgccatatgtcctagaaaaggggtcataatcgcaactttttgttaagataacgggtcaaaaaacatatttccc 117  Q
    ||||||| || ||||||||| |||||| ||||  ||||| | ||||  || ||||||||||||||||||| ||||||| | |||||||| ||||||||||    
T  2331236 cctttcatccaaaaattgctgagaagacgccacttgtcccaaaaaataggccataatcgcaactttttgtaaagataaggagtcaaaaagcatatttccc 2331137  T
Q  118 ttatgttagggggtcaaaagagcatatttccc-------agggggtcacttttgccannnnnnnnaataggggccaaaatcgcaaaattttgaaacttaa 210  Q
    |||||||||| |||||||||||||||||||||       ||||||||||||||||||        |  |||||||||||| |||| ||||| |||||||     
T  2331136 ttatgttaggaggtcaaaagagcatatttccctaaacatagggggtcacttttgccatttttttaataaggggccaaaattgcaacattttaaaacttag 2331037  T
Q  211 ggggcgaaaagtggagtttagc 232  Q
     || ||||||||| ||||||||    
T  2331036 aggacgaaaagtgaagtttagc 2331015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 18 - 149
Target Start/End: Complemental strand, 10655552 - 10655422
Alignment:
Q  18 cctttcagcccaaaattgctaagaagatgccatatgtcctagaaaaggggtcataatcgcaactttttgttaagataacgggtcaaaaaacatatttccc 117  Q
    ||||||| |||||||||||| |||||||||||  ||||| |||||| ||||||||||||||||||||||| ||||||| |||| |||||| ||||||| |    
T  10655552 cctttcatcccaaaattgctcagaagatgccacgtgtcccagaaaatgggtcataatcgcaactttttgtaaagataaggggttaaaaaa-atatttctc 10655454  T
Q  118 ttatgttagggggtcaaaagagcatatttccc 149  Q
    |||| ||||||| | |||||||||||||||||    
T  10655453 ttatattaggggattaaaagagcatatttccc 10655422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 18 - 149
Target Start/End: Original strand, 36746584 - 36746715
Alignment:
Q  18 cctttcagcccaaaattgctaagaagatgccatatgtcctagaaaaggggtcataatcgcaactttttgttaagataacgggtcaaaaaacatatttccc 117  Q
    ||||||| |||||||||| | |||||| ||||  ||||| | |||||||||||||||||||||||||||| ||||||| |||| ||||  |||||||| |    
T  36746584 cctttcatcccaaaattgttgagaagacgccacgtgtcccaaaaaaggggtcataatcgcaactttttgtaaagataaggggttaaaaggcatatttctc 36746683  T
Q  118 ttatgttagggggtcaaaagagcatatttccc 149  Q
    |||||||||| |||||||||||||||||||||    
T  36746684 ttatgttaggaggtcaaaagagcatatttccc 36746715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 18 - 149
Target Start/End: Original strand, 41452330 - 41452461
Alignment:
Q  18 cctttcagcccaaaattgctaagaagatgccatatgtcctagaaaaggggtcataatcgcaactttttgttaagataacgggtcaaaaaacatatttccc 117  Q
    ||||||| || ||||||||| |||||| | ||  ||||| | |||||||||||||||||||||||||||| ||||||| |||||||||| ||||||||||    
T  41452330 cctttcatccaaaaattgctgagaagacgacacgtgtcccaaaaaaggggtcataatcgcaactttttgtaaagataaggggtcaaaaagcatatttccc 41452429  T
Q  118 ttatgttagggggtcaaaagagcatatttccc 149  Q
    |||||||||| ||||| ||||| |||||||||    
T  41452430 ttatgttaggaggtcagaagagtatatttccc 41452461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 18 - 146
Target Start/End: Complemental strand, 17305988 - 17305859
Alignment:
Q  18 cctttcagcccaaaattgctaagaagatgccatatgtcctagaaaagggg-tcataatcgcaactttttgttaagataacgggtcaaaaaacatatttcc 116  Q
    ||||||| |||||||||| | |||||| |||| |||||| | |||||||| |||||||| ||||||||||| || |||| |||||||||| |||||||||    
T  17305988 cctttcatcccaaaattgatgagaagacgccacatgtcccaaaaaagggggtcataatcacaactttttgtaaaaataaggggtcaaaaagcatatttcc 17305889  T
Q  117 cttatgttagggggtcaaaagagcatattt 146  Q
    ||||||||||| ||||||||||||||||||    
T  17305888 cttatgttaggaggtcaaaagagcatattt 17305859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 29 - 233
Target Start/End: Complemental strand, 42271544 - 42271333
Alignment:
Q  29 aaaattgctaagaagatgccatatgtcctagaaaaggggtcataatcgcaactttttgttaagataacgggtcaaaaaacatatttcccttatgttaggg 128  Q
    ||||||||| |||||| ||||  ||| | | |||| ||| ||||||||||||||||||| || |||| |||||||||| ||||||||||||||||||||     
T  42271544 aaaattgctgagaagacgccacgtgttccaaaaaaagggccataatcgcaactttttgtaaacataaggggtcaaaaagcatatttcccttatgttagga 42271445  T
Q  129 ggtcaaaagagcatatttccc-------agggggtcacttttgccannnnnnnnaatagg-ggccaaaatcgcaaaattttgaaacttaaggggcgaaaa 220  Q
    |||||||||||||||||||||       ||||||||||||||||||        |||||| |||||||||||||| |||||||||||||  |||||||||    
T  42271444 ggtcaaaagagcatatttccctaaacatagggggtcacttttgcca-tttttttaataggaggccaaaatcgcaacattttgaaacttagagggcgaaaa 42271346  T
Q  221 gtggagtttagcc 233  Q
     || | |||||||    
T  42271345 atgaaatttagcc 42271333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 60 - 149
Target Start/End: Original strand, 10023907 - 10023996
Alignment:
Q  60 aaaaggggtcataatcgcaactttttgttaagataacgggtcaaaaaacatatttcccttatgttagggggtcaaaagagcatatttccc 149  Q
    |||||||| |||| |||||||||||||| ||||||| ||||||||||| |||||| |||||||| |||||||||||||||||||||||||    
T  10023907 aaaaggggccatattcgcaactttttgtaaagataaggggtcaaaaaaaatattttccttatgtaagggggtcaaaagagcatatttccc 10023996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 21 - 235
Target Start/End: Complemental strand, 8527015 - 8526794
Alignment:
Q  21 ttcagcccaaaattgctaagaagatgccatatgtcctagaaaaggggtcataatcgcaactttttgttaagataacgggtcaaaaaacatatttccctta 120  Q
    |||| |||||||||||| |||||||||||  ||||  | |||||||| |||||| |||||||||||| || |||  |||||||||| |||||||||||||    
T  8527015 ttcatcccaaaattgctgagaagatgccacgtgtctcaaaaaaggggccataattgcaactttttgtaaaaatag-gggtcaaaaagcatatttccctta 8526917  T
Q  121 tgttagggggtcaaaagagcatatttccc-------agggggtcacttttgccannnnnnnnaata-ggggccaaaatcgcaaaattttgaaacttaagg 212  Q
    ||||||| ||||||| |||||||||| ||       ||||||||| ||||||||        |||| |||| |||||| ||||||||||||||||||  |    
T  8526916 tgttaggaggtcaaatgagcatattttcctaaacatagggggtcatttttgccatttttattaatagggggtcaaaattgcaaaattttgaaacttagag 8526817  T
Q  213 ggcgaaaagtggagtttagccta 235  Q
    || |||||||| | |||||||||    
T  8526816 ggtgaaaagtgaaatttagccta 8526794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 26 - 133
Target Start/End: Original strand, 9822189 - 9822296
Alignment:
Q  26 cccaaaattgctaagaagatgccatatgtcctagaaaaggggtcataatcgcaactttttgttaagataacgggtcaaaa-aacatatttcccttatgtt 124  Q
    |||||||||||| |||||| ||||| ||||| | |||||||||||||||||||||||||||  ||||||| ||||||||| | | |||||||||||||||    
T  9822189 cccaaaattgctgagaagacgccatgtgtccca-aaaaggggtcataatcgcaactttttgagaagataaggggtcaaaagatcgtatttcccttatgtt 9822287  T
Q  125 agggggtca 133  Q
    |||||||||    
T  9822288 agggggtca 9822296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 26 - 133
Target Start/End: Original strand, 10724114 - 10724221
Alignment:
Q  26 cccaaaattgctaagaagatgccatatgtcctagaaaaggggtcataatcgcaactttttgttaagataacgggtcaaaa-aacatatttcccttatgtt 124  Q
    |||||||||||| |||||| ||||| ||||| | |||||||||||||||||||||||||||  ||||||| ||||||||| | | |||||||||||||||    
T  10724114 cccaaaattgctgagaagacgccatgtgtccca-aaaaggggtcataatcgcaactttttgagaagataaggggtcaaaagatcgtatttcccttatgtt 10724212  T
Q  125 agggggtca 133  Q
    |||||||||    
T  10724213 agggggtca 10724221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 29 - 144
Target Start/End: Original strand, 39440212 - 39440328
Alignment:
Q  29 aaaattgctaagaagatgccatatgtcctagaaaaggggtcataatcgcaactttttgttaagataacgggtcaaaa-aacatatttcccttatgttagg 127  Q
    ||||||| | |||||| |||| |||||||| || ||||||||||||||||||||||||  ||||||| || |||||| | ||||||||||||||||||||    
T  39440212 aaaattgttgagaagacgccacatgtcctaaaacaggggtcataatcgcaactttttgaaaagataagggatcaaaagatcatatttcccttatgttagg 39440311  T
Q  128 gggtcaaaagagcatat 144  Q
     |||||||||| |||||    
T  39440312 aggtcaaaagatcatat 39440328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 60 - 150
Target Start/End: Original strand, 24448166 - 24448257
Alignment:
Q  60 aaaaggggtcataatcgcaactttttgttaagataacgggtca-aaaaacatatttcccttatgttagggggtcaaaagagcatatttccca 150  Q
    |||||||| ||||||| ||  ||||||| ||||||| |||||| |||||||||||||||||||||||||||||||||| |||||||||||||    
T  24448166 aaaaggggccataatcacatttttttgtaaagataaggggtcataaaaacatatttcccttatgttagggggtcaaaaaagcatatttccca 24448257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 26 - 146
Target Start/End: Original strand, 3403140 - 3403261
Alignment:
Q  26 cccaaaattgctaagaagatgccatatgtcctagaaaaggggtcataatcgcaactttttgttaagataacgggtcaaaaaa-catatttcccttatgtt 124  Q
    ||||||||| || || ||| |||| |||||| | ||||| |||||||||||||| ||||||  || |||| || |||||| | |||||||||||||||||    
T  3403140 cccaaaattcctgaggagacgccacatgtcccaaaaaagtggtcataatcgcaagtttttgagaacataagggatcaaaagatcatatttcccttatgtt 3403239  T
Q  125 agggggtcaaaagagcatattt 146  Q
    ||||||||||||||||||||||    
T  3403240 agggggtcaaaagagcatattt 3403261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 66 - 149
Target Start/End: Original strand, 21225677 - 21225759
Alignment:
Q  66 ggtcataatcgcaactttttgttaagataacgggtcaaaaaacatatttcccttatgttagggggtcaaaagagcatatttccc 149  Q
    |||||||||||||||||||||| ||||  | |||||||| | |||||||||||||||||| |||||||||||||||||||||||    
T  21225677 ggtcataatcgcaactttttgtaaagacgaggggtcaaatagcatatttcccttatgtta-ggggtcaaaagagcatatttccc 21225759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 26 - 232
Target Start/End: Complemental strand, 25002922 - 25002712
Alignment:
Q  26 cccaaaattgctaagaagatgccatatgtcctagaaaaggggtcataatcgcaactttttgttaagataacgggtcaaaa-aacatatttcccttatgtt 124  Q
    |||||| ||||||||| || ||||| ||||| | || | ||||||||||||||| ||| ||  ||||||| ||||||||| | ||||||||| |||||||    
T  25002922 cccaaagttgctaagaggacgccatgtgtcccaaaacacgggtcataatcgcaaatttatgagaagataaggggtcaaaagatcatatttcctttatgtt 25002823  T
Q  125 agggggtcaaaagagcatatttcc-----cagggggtcacttttgccannnnnnnnaataggggccaaaatcgcaaaattttgaaacttaaggggcgaaa 219  Q
    | |||||||||||||||| |||||     || ||||||| ||||||||        |||||||||||||||| ||| ||||||||||||| ||  |||||    
T  25002822 a-ggggtcaaaagagcatgtttccctaaacatggggtcatttttgcca-tttatttaataggggccaaaatcacaacattttgaaacttagggcacgaaa 25002725  T
Q  220 agtggagtttagc 232  Q
    |||| ||||||||    
T  25002724 agtgcagtttagc 25002712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 69 - 149
Target Start/End: Complemental strand, 24464748 - 24464667
Alignment:
Q  69 cataatcgcaactttttgttaagataacgggtcaaaaaa-catatttcccttatgttagggggtcaaaagagcatatttccc 149  Q
    |||||||||||| |||||  ||||||| ||||||||| | ||||||||||||||||||||||||||||||| ||||||||||    
T  24464748 cataatcgcaacattttgagaagataaggggtcaaaagatcatatttcccttatgttagggggtcaaaagaacatatttccc 24464667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 26 - 149
Target Start/End: Complemental strand, 15681845 - 15681721
Alignment:
Q  26 cccaaaattgctaagaagatgccatatgtcctagaaaaggggtcataatcgcaactttttgttaagataacgggtcaaaaaa-catatttcccttatgtt 124  Q
    |||||||||  | |||||| ||||  ||||| | ||||| || ||||||||||||||||||  ||||||| ||||||||| | |||| ||||||||||||    
T  15681845 cccaaaatttatgagaagacgccacgtgtcccaaaaaagaggccataatcgcaactttttgacaagataaggggtcaaaagatcatagttcccttatgtt 15681746  T
Q  125 agggggtcaaaagagcatatttccc 149  Q
    |||||||||||||| |||| |||||    
T  15681745 agggggtcaaaagatcatagttccc 15681721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 29 - 147
Target Start/End: Complemental strand, 3769616 - 3769498
Alignment:
Q  29 aaaattgctaagaagatgccatatgtcctagaaaaggggtcataatcgcaact-ttttgttaagataacgggtcaaaaaacatatttcccttatgttagg 127  Q
    ||||||| | ||||||||||| ||||||  |||||||| |||||||||||||| |||||| |||||||  | ||||||| |||||||| | ||||||| |    
T  3769616 aaaattgttgagaagatgccacatgtccc-gaaaagggatcataatcgcaacttttttgtaaagataagagatcaaaaagcatatttctcatatgttaag 3769518  T
Q  128 gggtcaaaagagcatatttc 147  Q
    ||||||||| ||||||||||    
T  3769517 gggtcaaaaaagcatatttc 3769498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 63 - 149
Target Start/End: Original strand, 4571469 - 4571556
Alignment:
Q  63 aggggtcataatcgcaactttttgttaagataacgggtcaaaaaa-catatttcccttatgttagggggtcaaaagagcatatttccc 149  Q
    ||||| || |||||||||||||||  ||||||| ||||||||| | |||||||||||||||||| ||||| |||||||||||||||||    
T  4571469 aggggccacaatcgcaactttttgagaagataaggggtcaaaagatcatatttcccttatgttatggggtaaaaagagcatatttccc 4571556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 60 - 146
Target Start/End: Complemental strand, 5111620 - 5111534
Alignment:
Q  60 aaaaggggtcataatcgcaactttttgttaagataacgggtcaaaa-aacatatttcccttatgttagggggtcaaaagagcatattt 146  Q
    |||||||| ||||||||||||||||||  ||||||| ||||||||| | |||||||||||||||||| |||||||||||| |||||||    
T  5111620 aaaaggggccataatcgcaactttttgagaagataaggggtcaaaatatcatatttcccttatgtta-ggggtcaaaagaacatattt 5111534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 63 - 149
Target Start/End: Complemental strand, 26126432 - 26126346
Alignment:
Q  63 aggggtcataatcgcaactttttgttaagataacgggtcaaaa-aacatatttcccttatgttagggggtcaaaagagcatatttccc 149  Q
    ||||| ||||||||||||||||||  ||||||| ||||||||| | |||||||||||||||||| |||||||||| ||||||||||||    
T  26126432 aggggccataatcgcaactttttgagaagataaggggtcaaaagatcatatttcccttatgtta-ggggtcaaaaaagcatatttccc 26126346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 29 - 149
Target Start/End: Complemental strand, 26385473 - 26385353
Alignment:
Q  29 aaaattgctaagaagatgccatatgtcctagaaaaggggtcataatcgcaactttttgttaagataacgggtcaaaa-aacatatttcccttatgttagg 127  Q
    ||||||||||| |||| |||| |||||| | || | ||| ||||||||||||||||||  |||||||  |||||||| | |||||||| ||||||||| |    
T  26385473 aaaattgctaataagacgccacatgtcccaaaacatgggccataatcgcaactttttgagaagataagaggtcaaaatatcatatttctcttatgtta-g 26385375  T
Q  128 gggtcaaaagagcatatttccc 149  Q
    ||||||||| ||||||||||||    
T  26385374 gggtcaaaatagcatatttccc 26385353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 97 - 149
Target Start/End: Original strand, 6798074 - 6798126
Alignment:
Q  97 gggtcaaaaaacatatttcccttatgttagggggtcaaaagagcatatttccc 149  Q
    |||||||||| ||||||||||||||||||| ||||||||||||||||||||||    
T  6798074 gggtcaaaaatcatatttcccttatgttagagggtcaaaagagcatatttccc 6798126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 18 - 145
Target Start/End: Original strand, 33237494 - 33237622
Alignment:
Q  18 cctttcagcccaaaattgctaagaagatgccatatgtcctagaaaaggggtcataatcgcaactttttgttaagataacgggtcaaaa-aacatatttcc 116  Q
    ||||||| |||||||||||| |||||| ||||  ||||| | || || |||||||||| |||||||||   ||| ||| ||||||||| | |||||| ||    
T  33237494 cctttcatcccaaaattgctgagaagacgccacgtgtcccaaaacagtggtcataatcacaacttttttagaaggtaaggggtcaaaatatcatattacc 33237593  T
Q  117 cttatgttagggggtcaaaagagcatatt 145  Q
    ||||| ||||||||| |||||||||||||    
T  33237594 cttattttagggggtgaaaagagcatatt 33237622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 18 - 148
Target Start/End: Complemental strand, 19493541 - 19493412
Alignment:
Q  18 cctttcagcccaaaattgctaagaagatgccatatgtcctagaaaaggggtcataatcgcaactttttgttaagataacgggtcaaaaaa-catatttcc 116  Q
    ||||||| |||||||| ||| |||||| ||||  ||||||| || ||||| ||||||| || |||||||  ||||||| ||||||||||| ||||||| |    
T  19493541 cctttcatcccaaaatggctgagaagacgccacgtgtcctaaaacaggggccataatcaca-ctttttgagaagataaagggtcaaaaaatcatattttc 19493443  T
Q  117 cttatgttagggggtcaaaagagcatatttcc 148  Q
    |||||||| |||| |||||| |||||||||||    
T  19493442 cttatgtttgggg-tcaaaatagcatatttcc 19493412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 60 - 149
Target Start/End: Complemental strand, 4193731 - 4193642
Alignment:
Q  60 aaaaggggtcataatcgcaactttttgttaagataacgggtcaaaa-aacatatttcccttatgttagggggtcaaaagagcatatttccc 149  Q
    |||||||| |||||| |||||||||||  ||||||| ||||||||| | |||||||| |||||||||  ||||||||||||||||||||||    
T  4193731 aaaaggggccataattgcaactttttgaaaagataaggggtcaaaagatcatatttctcttatgtta-agggtcaaaagagcatatttccc 4193642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 69 - 149
Target Start/End: Complemental strand, 39182106 - 39182027
Alignment:
Q  69 cataatcgcaactttttgttaagataacgggtcaaaa-aacatatttcccttatgttagggggtcaaaagagcatatttccc 149  Q
    ||||||||||||||||||  ||||||| ||||||||| | ||||||||||||||||||   |||||||||||||||||||||    
T  39182106 cataatcgcaactttttgagaagataaggggtcaaaagatcatatttcccttatgtta--tggtcaaaagagcatatttccc 39182027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 179 - 234
Target Start/End: Complemental strand, 6650598 - 6650543
Alignment:
Q  179 aggggccaaaatcgcaaaattttgaaacttaaggggcgaaaagtggagtttagcct 234  Q
    ||||||||||||||||||||||| ||||||| |||||||| |||| ||||||||||    
T  6650598 aggggccaaaatcgcaaaattttaaaacttagggggcgaacagtgcagtttagcct 6650543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 26 - 118
Target Start/End: Complemental strand, 5087211 - 5087118
Alignment:
Q  26 cccaaaattgctaagaagatgccatatgtcctagaaaaggggtcataatcgcaactttttgttaagataacgggtcaaaaaa-catatttccct 118  Q
    |||||||||| | |||||| ||||  ||||| | || |||| |||||||||||||||||||  ||||||| ||||||||||| |||||||||||    
T  5087211 cccaaaattgatgagaagacgccacgtgtcccaaaatagggatcataatcgcaactttttgaaaagataaggggtcaaaaaatcatatttccct 5087118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 70 - 146
Target Start/End: Original strand, 9157183 - 9157259
Alignment:
Q  70 ataatcgcaactttttgttaagataacgggtcaaaa-aacatatttcccttatgttagggggtcaaaagagcatattt 146  Q
    |||||||||||||||||  |||||||  |||||||| | |||||||| ||||||||| ||||||||||||||||||||    
T  9157183 ataatcgcaactttttgagaagataagtggtcaaaagatcatatttcacttatgtta-ggggtcaaaagagcatattt 9157259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 108 - 149
Target Start/End: Complemental strand, 15681730 - 15681689
Alignment:
Q  108 catatttcccttatgttagggggtcaaaagagcatatttccc 149  Q
    |||| |||||||||||||||||||||||||||||||||||||    
T  15681730 catagttcccttatgttagggggtcaaaagagcatatttccc 15681689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 60 - 139
Target Start/End: Complemental strand, 43251446 - 43251366
Alignment:
Q  60 aaaaggggtcataatcgcaactttttgttaagataacgggtcaaaaaa-catatttcccttatgttagggggtcaaaagag 139  Q
    |||| ||||| |||||| |||||||||  ||||||| | ||||||| | ||||||||||||||||||| ||||||||||||    
T  43251446 aaaaagggtcttaatcgtaactttttgagaagataaagagtcaaaagatcatatttcccttatgttagagggtcaaaagag 43251366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 180 - 243
Target Start/End: Original strand, 8527045 - 8527108
Alignment:
Q  180 ggggccaaaatcgcaaaattttgaaacttaaggggcgaaaagtggagtttagcctatattttat 243  Q
    |||||||||||||||| |||||||||  || ||||||||||||| | |||||||| ||||||||    
T  8527045 ggggccaaaatcgcaacattttgaaatatagggggcgaaaagtgcactttagcctttattttat 8527108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 186 - 233
Target Start/End: Complemental strand, 23080865 - 23080818
Alignment:
Q  186 aaaatcgcaaaattttgaaacttaaggggcgaaaagtggagtttagcc 233  Q
    |||||||||| ||||||||||||||||||| ||||||| |||||||||    
T  23080865 aaaatcgcaatattttgaaacttaaggggcaaaaagtgcagtttagcc 23080818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 180 - 242
Target Start/End: Original strand, 20636869 - 20636931
Alignment:
Q  180 ggggccaaaatcgcaaaattttgaaacttaaggggcgaaaagtggagtttagcctatatttta 242  Q
    |||| ||||||||||| |||||||||| || ||||||||||||| | |||||||| |||||||    
T  20636869 ggggtcaaaatcgcaacattttgaaacatagggggcgaaaagtgcactttagcctttatttta 20636931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 63 - 148
Target Start/End: Complemental strand, 23439772 - 23439686
Alignment:
Q  63 aggggtcataatcgcaactttttgttaagataacgggtcaaaa-aacatatttcccttatgttagggggtcaaaagagcatatttcc 148  Q
    |||||||||||||||||||||||   ||||||| || |||||| | ||||||||||||| ||||| | ||||||| | |||||||||    
T  23439772 aggggtcataatcgcaacttttttaaaagataagggatcaaaagagcatatttcccttaagttagagagtcaaaatatcatatttcc 23439686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 26 - 118
Target Start/End: Complemental strand, 6650725 - 6650632
Alignment:
Q  26 cccaaaattgctaagaagatgccatatgtcctagaaaaggggtcataatcgcaactttttgttaagataacgggtcaaaa-aacatatttccct 118  Q
    |||||||||| | |||||| |||| |||||  | || ||||| ||||||||||||||||||  ||||||| ||||||||| | |||||||||||    
T  6650725 cccaaaattgatgagaagacgccacatgtctcaaaacaggggccataatcgcaactttttgagaagataaggggtcaaaagagcatatttccct 6650632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 69 - 149
Target Start/End: Original strand, 6798014 - 6798094
Alignment:
Q  69 cataatcgcaactttttgttaagataacgggtcaaaa-aacatatttcccttatgttagggggtcaaaagagcatatttccc 149  Q
    |||||||||||||||||   ||||||| ||||||||| | ||||||| ||||||||||| ||||||||| | ||||||||||    
T  6798014 cataatcgcaacttttttagaagataaggggtcaaaagatcatattttccttatgttagagggtcaaaa-atcatatttccc 6798094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 179 - 236
Target Start/End: Complemental strand, 21690470 - 21690413
Alignment:
Q  179 aggggccaaaatcgcaaaattttgaaacttaaggggcgaaaagtggagtttagcctat 236  Q
    |||||||||||| |||| |||||||||| || ||| ||||||||| ||||||||||||    
T  21690470 aggggccaaaattgcaagattttgaaacataggggacgaaaagtgtagtttagcctat 21690413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 185 - 237
Target Start/End: Complemental strand, 24448093 - 24448041
Alignment:
Q  185 caaaatcgcaaaattttgaaacttaaggggcgaaaagtggagtttagcctata 237  Q
    ||||||||||| ||||| ||||||  ||||||||||||| |||||||||||||    
T  24448093 caaaatcgcaacattttaaaacttggggggcgaaaagtgcagtttagcctata 24448041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 70 - 146
Target Start/End: Complemental strand, 29051789 - 29051714
Alignment:
Q  70 ataatcgcaactttttgttaagataacgggtcaaaaaacatatttcccttatgttagggggtcaaaagagcatattt 146  Q
    |||||||||||||||||  ||||||| |||||||||| ||| |||| ||||| |||  |||||||| ||||||||||    
T  29051789 ataatcgcaactttttgagaagataaggggtcaaaaatcatttttctcttatatta-tgggtcaaaggagcatattt 29051714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 183 - 234
Target Start/End: Complemental strand, 11843228 - 11843177
Alignment:
Q  183 gccaaaatcgcaaaattttgaaacttaaggggcgaaaagtggagtttagcct 234  Q
    ||||||||||||| |||||||||| || ||||||| ||||| ||||||||||    
T  11843228 gccaaaatcgcaacattttgaaacatagggggcgagaagtgcagtttagcct 11843177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 182 - 233
Target Start/End: Original strand, 15681883 - 15681934
Alignment:
Q  182 ggccaaaatcgcaaaattttgaaacttaaggggcgaaaagtggagtttagcc 233  Q
    |||||||||||||| ||||||||||||| ||| | ||||||| |||||||||    
T  15681883 ggccaaaatcgcaacattttgaaacttaggggtctaaaagtgcagtttagcc 15681934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 176 - 243
Target Start/End: Complemental strand, 23658831 - 23658764
Alignment:
Q  176 aataggggccaaaatcgcaaaattttgaaacttaaggggcgaaaagtggagtttagcctatattttat 243  Q
    ||||| |||||||||||||| ||||| ||||||| ||  ||||||||| |||||| ||| ||||||||    
T  23658831 aatagaggccaaaatcgcaacattttaaaacttagggatcgaaaagtgcagtttaacctttattttat 23658764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 179 - 234
Target Start/End: Original strand, 25002955 - 25003010
Alignment:
Q  179 aggggccaaaatcgcaaaattttgaaacttaaggggcgaaaagtggagtttagcct 234  Q
    |||| |||||||||||| ||||| ||||||| ||||||||||||  ||||||||||    
T  25002955 agggaccaaaatcgcaacattttaaaacttagggggcgaaaagtacagtttagcct 25003010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 180 - 235
Target Start/End: Original strand, 26385512 - 26385567
Alignment:
Q  180 ggggccaaaatcgcaaaattttgaaacttaaggggcgaaaagtggagtttagccta 235  Q
    |||||||||||||||| ||||||||||||| |||||  |||||| |||||| ||||    
T  26385512 ggggccaaaatcgcaacattttgaaacttagggggcagaaagtgcagtttatccta 26385567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 179 - 233
Target Start/End: Complemental strand, 10655384 - 10655330
Alignment:
Q  179 aggggccaaaatcgcaaaattttgaaacttaaggggcgaaaagtggagtttagcc 233  Q
    |||||||||||  |||| ||||| ||||||| ||||| |||||||||||||||||    
T  10655384 aggggccaaaactgcaacattttaaaacttagggggcaaaaagtggagtttagcc 10655330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 176 - 233
Target Start/End: Complemental strand, 17305822 - 17305764
Alignment:
Q  176 aatagggg-ccaaaatcgcaaaattttgaaacttaaggggcgaaaagtggagtttagcc 233  Q
    |||||||| |||||||||||| |||||||||||||  || ||||||||| |||||||||    
T  17305822 aatagggggccaaaatcgcaacattttgaaacttagaggacgaaaagtgaagtttagcc 17305764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 63 - 148
Target Start/End: Original strand, 23461147 - 23461233
Alignment:
Q  63 aggggtcataatcgcaactttttgttaagataacgggtcaaaa-aacatatttcccttatgttagggggtcaaaagagcatatttcc 148  Q
    ||||||||||||||||||||||||  | ||||| || |||||| |  ||||||| |||| ||||| ||||||||| | |||||||||    
T  23461147 aggggtcataatcgcaactttttgaaatgataaaggatcaaaagagaatatttctcttaagttagagggtcaaaataacatatttcc 23461233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 180 - 234
Target Start/End: Complemental strand, 27869249 - 27869195
Alignment:
Q  180 ggggccaaaatcgcaaaattttgaaacttaaggggcgaaaagtggagtttagcct 234  Q
    |||| ||||||||||| |||||||||| || ||||||||||||| | ||||||||    
T  27869249 ggggtcaaaatcgcaacattttgaaacatagggggcgaaaagtgcactttagcct 27869195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 180 - 234
Target Start/End: Original strand, 39182184 - 39182238
Alignment:
Q  180 ggggccaaaatcgcaaaattttgaaacttaaggggcgaaaagtggagtttagcct 234  Q
    |||| |||||| |||| ||||| ||||||| ||||||||||||| ||||||||||    
T  39182184 ggggtcaaaattgcaacatttttaaacttagggggcgaaaagtgcagtttagcct 39182238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 60 - 121
Target Start/End: Complemental strand, 42303328 - 42303266
Alignment:
Q  60 aaaaggggtcataatcgcaactttttgttaagataacgggtcaaaa-aacatatttcccttat 121  Q
    |||||||||||| ||||||| ||||||  ||||||| ||||||||| | ||||||||||||||    
T  42303328 aaaaggggtcatgatcgcaagtttttgagaagataaggggtcaaaagatcatatttcccttat 42303266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 184 - 242
Target Start/End: Original strand, 42303401 - 42303459
Alignment:
Q  184 ccaaaatcgcaaaattttgaaacttaaggggcgaaaagtggagtttagcctatatttta 242  Q
    ||||||||||||  |||||||||||| ||| ||| ||||| ||||||||||| ||||||    
T  42303401 ccaaaatcgcaactttttgaaacttaggggtcgagaagtgcagtttagcctaaatttta 42303459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #70
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 26 - 122
Target Start/End: Complemental strand, 7365438 - 7365341
Alignment:
Q  26 cccaaaattgctaagaagatgccatatgtcctagaaaaggggtcataatcgcaactttttgttaagataacgggtcaaaa-aacatatttcccttatg 122  Q
    |||||||||||| |||||||| ||  ||||| | || || ||  |||||||||||||||||  ||||||| | ||||||| | |||||||||||||||    
T  7365438 cccaaaattgctgagaagatgtcacgtgtcccaaaacagaggcaataatcgcaactttttgagaagataaggagtcaaaatatcatatttcccttatg 7365341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #71
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 181 - 234
Target Start/End: Original strand, 14624852 - 14624905
Alignment:
Q  181 gggccaaaatcgcaaaattttgaaacttaaggggcgaaaagtggagtttagcct 234  Q
    |||| ||||||||||||||||||||||||  || ||||||||| |||| |||||    
T  14624852 gggctaaaatcgcaaaattttgaaacttagaggacgaaaagtgcagttgagcct 14624905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #72
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 70 - 149
Target Start/End: Complemental strand, 3148095 - 3148015
Alignment:
Q  70 ataatcgcaactttttgttaagataacgggtcaaaaaa-catatttcccttatgttagggggtcaaaagagcatatttccc 149  Q
    ||||| |||| ||||||| ||| ||| ||||||||  | ||||||||| |||| ||||||| |||||||||||||| ||||    
T  3148095 ataattgcaattttttgtaaagttaaagggtcaaaggagcatatttccattattttaggggatcaaaagagcatatatccc 3148015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #73
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 182 - 234
Target Start/End: Complemental strand, 5111493 - 5111441
Alignment:
Q  182 ggccaaaatcgcaaaattttgaaacttaaggggcgaaaagtggagtttagcct 234  Q
    |||||||||| |||  ||||||||||||||||| |||||||| | ||||||||    
T  5111493 ggccaaaatcacaagtttttgaaacttaaggggtgaaaagtgcactttagcct 5111441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #74
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 180 - 236
Target Start/End: Original strand, 19493567 - 19493623
Alignment:
Q  180 ggggccaaaatcgcaaaattttgaaacttaaggggcgaaaagtggagtttagcctat 236  Q
    |||| ||||||||||| ||||| |||||||| ||||||||| || |||||| |||||    
T  19493567 ggggtcaaaatcgcaacattttaaaacttaaagggcgaaaaatgcagtttaacctat 19493623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #75
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 176 - 236
Target Start/End: Original strand, 21810087 - 21810147
Alignment:
Q  176 aataggggccaaaatcgcaaaattttgaaacttaaggggcgaaaagtggagtttagcctat 236  Q
    ||||||||  |||||| ||| ||||| ||||||| ||||||||||||| | ||||||||||    
T  21810087 aataggggttaaaatcacaatattttaaaacttagggggcgaaaagtgcactttagcctat 21810147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #76
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 176 - 235
Target Start/End: Complemental strand, 26385321 - 26385261
Alignment:
Q  176 aatagggg-ccaaaatcgcaaaattttgaaacttaaggggcgaaaagtggagtttagccta 235  Q
    |||||||| |||||| ||||| ||||||||| ||| ||| ||||||||| |||||||||||    
T  26385321 aataggggaccaaaaacgcaatattttgaaatttaggggacgaaaagtgcagtttagccta 26385261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #77
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 34 - 149
Target Start/End: Complemental strand, 47113322 - 47113206
Alignment:
Q  34 tgctaagaagatgccatatgtcctagaaaaggggtcataatcgcaactttttgttaagataacgggtcaaaaaa-catatttcccttatgttagggggtc 132  Q
    |||||| |||| ||||  ||||| | || ||||| || |||||||||||||| | ||||||| ||| ||||| | | ||||||||| | | ||| ||| |    
T  47113322 tgctaaaaagacgccacgtgtcccaaaacaggggccaaaatcgcaactttttataaagataaagggccaaaagatcttatttccctaaagatagagggcc 47113223  T
Q  133 aaaagagcatatttccc 149  Q
    |||||||||||||||||    
T  47113222 aaaagagcatatttccc 47113206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #78
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 180 - 235
Target Start/End: Complemental strand, 48176016 - 48175960
Alignment:
Q  180 ggggccaaaatcgcaaaattttgaaacttaaggggcg-aaaagtggagtttagccta 235  Q
    |||||||||||||||| ||| |||||| || |||||| ||||||| |||||||||||    
T  48176016 ggggccaaaatcgcaacattatgaaacatagggggcgaaaaagtgcagtttagccta 48175960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 115; Significance: 2e-58; HSPs: 43)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 18 - 235
Target Start/End: Original strand, 22968237 - 22968459
Alignment:
Q  18 cctttcagcccaaaattgctaagaagatgccatatgtcctagaaaaggggtcataatcgcaactttttgttaagataacgggtcaaaaaacatatttccc 117  Q
    ||||||| |||||||||||| |||||||| ||  ||||  ||||||||| |||||||||||||||||||| ||||||| |||||||||||||||||||||    
T  22968237 cctttcatcccaaaattgctcagaagatgtcacgtgtctcagaaaaggg-tcataatcgcaactttttgtaaagataa-gggtcaaaaaacatatttccc 22968334  T
Q  118 ttatgttagggggtcaaaagagcatatttccc-------agggggtcacttttgccannnnnnnnaataggggccaaaatcgcaaaattttgaaacttaa 210  Q
    ||||||||||||||||||||||||||||||||       ||||||||||||||||||        |||||||||||||||||||| ||||||||||||||    
T  22968335 ttatgttagggggtcaaaagagcatatttccctaaacatagggggtcacttttgccattttttttaataggggccaaaatcgcaacattttgaaacttaa 22968434  T
Q  211 ggggcgaaaagtggagtttagccta 235  Q
    ||||||||||||| | |||||||||    
T  22968435 ggggcgaaaagtgaactttagccta 22968459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 18 - 235
Target Start/End: Complemental strand, 23820156 - 23819934
Alignment:
Q  18 cctttcagcccaaaattgctaagaagatgccatatgtcctagaaaaggggtcataatcgcaactttttgttaagataacgggtcaaaaaacatatttccc 117  Q
    ||||||| |||||||||||| |||||||| ||  ||||  ||||||||| |||||||||||||||||||| ||||||| |||||||||||||||||||||    
T  23820156 cctttcatcccaaaattgctcagaagatgtcacgtgtctcagaaaaggg-tcataatcgcaactttttgtaaagataa-gggtcaaaaaacatatttccc 23820059  T
Q  118 ttatgttagggggtcaaaagagcatatttccc-------agggggtcacttttgccannnnnnnnaataggggccaaaatcgcaaaattttgaaacttaa 210  Q
    ||||||||||||||||||||||||||||||||       ||||||||||||||||||        |||||||||||||||||||| ||||||||||||||    
T  23820058 ttatgttagggggtcaaaagagcatatttccctaaacatagggggtcacttttgccattttttttaataggggccaaaatcgcaacattttgaaacttaa 23819959  T
Q  211 ggggcgaaaagtggagtttagccta 235  Q
    ||||||||||||| | |||||||||    
T  23819958 ggggcgaaaagtgaactttagccta 23819934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 99; E-Value: 7e-49
Query Start/End: Original strand, 21 - 233
Target Start/End: Complemental strand, 24603581 - 24603361
Alignment:
Q  21 ttcagcccaaaattgctaagaagatgccatatgtcctagaaaaggggtcataatcgcaactttttgttaagataacgggtcaaaaaacatatttccctta 120  Q
    |||| |||||||||||| |||||| ||||| ||||| | |||||||| ||||||||||||||||||| ||||||| |||||||||| |||||||||||||    
T  24603581 ttcatcccaaaattgctgagaagacgccatgtgtccaaaaaaaggggccataatcgcaactttttgtaaagataaggggtcaaaaagcatatttccctta 24603482  T
Q  121 tgttagggggtcaaaagagcatatttccc-------agggggtcacttttgccannnnnnnnaatagggg-ccaaaatcgcaaaattttgaaacttaagg 212  Q
    ||||||| |||||||||||||||||||||       ||||||||||||||||||        ||||||||  ||||||||||| |||||||||||||| |    
T  24603481 tgttaggaggtcaaaagagcatatttccctaaacatagggggtcacttttgccattttttttaataggggagcaaaatcgcaacattttgaaacttaaag 24603382  T
Q  213 ggcgaaaagtggagtttagcc 233  Q
    | ||||||||| |||||||||    
T  24603381 gacgaaaagtgaagtttagcc 24603361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 60 - 235
Target Start/End: Complemental strand, 8412939 - 8412756
Alignment:
Q  60 aaaaggggtcataatcgcaactttttgttaagataacgggtcaaaaaacatatttcccttatgttagggggtcaaaagagcatatttccc-------agg 152  Q
    |||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |       |||    
T  8412939 aaaaggggtcataatcgcaactttttgtaaagataaggggtcaaaaaacatatttcccttatgttagggggtcaaaagagcatatttctctaaacatagg 8412840  T
Q  153 gggtcacttttgccannnnnnnnaataggg-gccaaaatcgcaaaattttgaaacttaaggggcgaaaagtggagtttagccta 235  Q
    ||||| |||||||||        ||||||| ||||||||||||| |||||||||||||||||||| |||||||| |||||||||    
T  8412839 gggtcgcttttgccattttttttaatagggagccaaaatcgcaacattttgaaacttaaggggcggaaagtggactttagccta 8412756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 21 - 233
Target Start/End: Original strand, 26710391 - 26710611
Alignment:
Q  21 ttcagcccaaaattgctaagaagatgccatatgtcctagaaaaggggtcataatcgcaactttttgttaagataacgggtcaaaaaacatatttccctta 120  Q
    |||| ||||||||| || |||||||||||  ||||| | |||||||| ||||||||||||||||||| ||||||| |||||||||||||||||| |||||    
T  26710391 ttcatcccaaaattactgagaagatgccacgtgtcccaaaaaaggggccataatcgcaactttttgtaaagataaggggtcaaaaaacatattttcctta 26710490  T
Q  121 tgttagggggtcaaaagagcatatttccc-------agggggtcacttttgccannnnnnnnaata-ggggccaaaatcgcaaaattttgaaacttaagg 212  Q
    ||||||| |||||||||||||||||||||       |||||||| |||||||||        |||| |||||||||||||||| |||||||||||||  |    
T  26710491 tgttaggaggtcaaaagagcatatttccctaaacatagggggtcgcttttgccattttttttaatagggggccaaaatcgcaacattttgaaacttagag 26710590  T
Q  213 ggcgaaaagtggagtttagcc 233  Q
    ||||||||||| |||||||||    
T  26710591 ggcgaaaagtgaagtttagcc 26710611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 21 - 235
Target Start/End: Complemental strand, 18791577 - 18791356
Alignment:
Q  21 ttcagcccaaaattgctaagaagatgccatatgtcctagaaaaggggtcataatcgcaactttttgttaagataacgggtcaaaaaacatatttccctta 120  Q
    |||| |||||||||| | |||||| ||||  ||||||| |||||||| ||||||||||||||||||| ||||| | |||||||||| |||||||||||||    
T  18791577 ttcatcccaaaattgttgagaagacgccacgtgtcctaaaaaaggggccataatcgcaactttttgtaaagatgaggggtcaaaaagcatatttccctta 18791478  T
Q  121 tgttagggggtcaaaagagcatatttccc-------agggggtcacttttgccannnnnnnnaatag-gggccaaaatcgcaaaattttgaaacttaagg 212  Q
    |||||||||||||||||||||||||||||       ||||||||||||||||||        ||||| ||||||||||||||| ||||| |||||||  |    
T  18791477 tgttagggggtcaaaagagcatatttccctaaacatagggggtcacttttgcca-tttttttaatagagggccaaaatcgcaacattttaaaacttagag 18791379  T
Q  213 ggcgaaaagtggagtttagccta 235  Q
    ||||||||||| |||||||||||    
T  18791378 ggcgaaaagtgaagtttagccta 18791356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 18 - 243
Target Start/End: Complemental strand, 32451949 - 32451716
Alignment:
Q  18 cctttcagcccaaaattgctaagaagatgccatatgtcctagaaaaggggtcataatcgcaactttttgttaagataacgggtcaaaaaacatatttccc 117  Q
    ||||||| || ||||||| | |||||| |||| |||||  | |||||||||||||||||||||||||||| ||||||| |||||||||| ||||||||||    
T  32451949 cctttcatccaaaaattgttgagaagacgccacatgtctcaaaaaaggggtcataatcgcaactttttgtaaagataaggggtcaaaaagcatatttccc 32451850  T
Q  118 ttatgttagggggtcaaaagagcatattt-------cccagggggtcacttttgccannnnnnnnaata-ggggccaaaatcgcaaaattttgaaactta 209  Q
    |||||||||| ||||||||||||||||||       |  ||||||||||||||||||        |||| |||||||||||| ||| |||||||||||||    
T  32451849 ttatgttaggaggtcaaaagagcatatttctataaacatagggggtcacttttgccattttttttaatagggggccaaaatcacaacattttgaaactta 32451750  T
Q  210 aggggcgaaaagtggagtttagcctatattttat 243  Q
      |||||||||||| |||||||||| ||||||||    
T  32451749 gagggcgaaaagtgaagtttagcctttattttat 32451716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 21 - 236
Target Start/End: Original strand, 4597489 - 4597712
Alignment:
Q  21 ttcagcccaaaattgctaagaagatgccatatgtcctagaaaaggggtcataatcgcaactttttgttaagataacgggtcaaaaaacatatttccctta 120  Q
    |||| ||||||||| || | |||| |||| |||||| | |||||||| |||||| |||||||||||| ||||||| ||||||||||||||||||||||||    
T  4597489 ttcaacccaaaattactgaaaagacgccacatgtcccaaaaaaggggccataattgcaactttttgtaaagataaggggtcaaaaaacatatttccctta 4597588  T
Q  121 tgttagggggtcaaaagagcatatttccc-------agggggtcacttttgccannnnnnnnaata-ggggccaaaatcgcaaaattttgaaacttaagg 212  Q
    ||||||| |||||||||||||||||||||       ||||||||| ||||||||        |||| ||||||||||| |||| |||||||||||||  |    
T  4597589 tgttaggaggtcaaaagagcatatttccctaaacatagggggtcatttttgccattttttataatagggggccaaaattgcaacattttgaaacttagag 4597688  T
Q  213 ggcgaaaagtggagtttagcctat 236  Q
    ||||||||||| ||||||||||||    
T  4597689 ggcgaaaagtgaagtttagcctat 4597712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 21 - 235
Target Start/End: Complemental strand, 34834145 - 34833923
Alignment:
Q  21 ttcagcccaaaattgctaagaagatgccatatgtcctagaaaaggggtcataatcgcaactttttgttaagataacgggtcaaaaaacatatttccctta 120  Q
    |||| |||||||||||| |||||| ||||  ||||| | |||||||| |||||| | |||||||||| ||||||||||||||||||||||||||||||||    
T  34834145 ttcatcccaaaattgctgagaagacgccacgtgtcccaaaaaaggggccataattgtaactttttgtaaagataacgggtcaaaaaacatatttccctta 34834046  T
Q  121 tgttagggggtcaaaagagcatatttccc-------agggggtcacttttgccannnnnnnnaataggggcca-aaatcgcaaaattttgaaacttaagg 212  Q
    ||||||| |||||||||||||||||||||       ||||||||||||||||||        ||||||||| |  ||| |||| |||||||||||||  |    
T  34834045 tgttaggaggtcaaaagagcatatttccctaaacatagggggtcacttttgccattttttttaataggggcgaggaattgcaacattttgaaacttagag 34833946  T
Q  213 ggcgaaaagtggagtttagccta 235  Q
    ||||||||||| |||||||||||    
T  34833945 ggcgaaaagtgaagtttagccta 34833923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 18 - 149
Target Start/End: Complemental strand, 3118902 - 3118771
Alignment:
Q  18 cctttcagcccaaaattgctaagaagatgccatatgtcctagaaaaggggtcataatcgcaactttttgttaagataacgggtcaaaaaacatatttccc 117  Q
    ||||||| |||||||||| | |||||||| ||  ||||| |||||||||||||||||||||| ||||||| |||||||  ||||||||||||||||||||    
T  3118902 cctttcatcccaaaattgatcagaagatgtcacgtgtcccagaaaaggggtcataatcgcaaatttttgtaaagataagaggtcaaaaaacatatttccc 3118803  T
Q  118 ttatgttagggggtcaaaagagcatatttccc 149  Q
    ||||||||||||||||||||||||||||||||    
T  3118802 ttatgttagggggtcaaaagagcatatttccc 3118771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 20 - 235
Target Start/End: Complemental strand, 24051229 - 24051007
Alignment:
Q  20 tttcagcccaaaattgctaagaagatgccatatgtcctagaaaaggggtcataatcgcaactttttgttaagataacgggtcaaaaaacatatttccctt 119  Q
    ||||| |||||||||| | |||||| ||||  ||||| | ||||| |||||||||||||||||||||| || |||| ||||||||||  ||||||| |||    
T  24051229 tttcatcccaaaattgatgagaagacgccacgtgtcccaaaaaagaggtcataatcgcaactttttgtaaatataaggggtcaaaaagtatatttctctt 24051130  T
Q  120 atgttagggggtcaaaagagcatatttccc-------agggggtcacttttgccannnnnnnnaataggggccaaaatcgcaaaattttgaaacttaagg 212  Q
    |||||||| |||||||||||||||||||||       ||||||||||||||||||        |   |||||||||||||||| |||||||||||||  |    
T  24051129 atgttaggaggtcaaaagagcatatttccctaaacatagggggtcacttttgccatttttttaatagggggccaaaatcgcaacattttgaaacttagag 24051030  T
Q  213 ggcgaaaagtggagtttagccta 235  Q
    ||||||||||| |||||||||||    
T  24051029 ggcgaaaagtgaagtttagccta 24051007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 18 - 234
Target Start/End: Complemental strand, 31211017 - 31210793
Alignment:
Q  18 cctttcagcccaaaattgctaagaagatgccatatgtcctagaaaaggggtcataatcgcaactttttgttaagataacgggtcaaaaaacatatttccc 117  Q
    ||||||| |||||||||||| ||||||  |||  ||||| | |||||| |  |||||||||||||||||| ||||||| |||||||||| ||||||||||    
T  31211017 cctttcatcccaaaattgctgagaagacaccacgtgtcccaaaaaaggtgctataatcgcaactttttgtaaagataaggggtcaaaaagcatatttccc 31210918  T
Q  118 ttatgttagggggtcaaaagagcatatttccc-------agggggtcacttttgccannnnnnnnaatagg-ggccaaaatcgcaaaattttgaaactta 209  Q
    |||||||||| |||||||||||||||||| ||       ||||||||||||||| ||        |||||| |||||||||||||| ||||| |||||||    
T  31210917 ttatgttaggaggtcaaaagagcatattttcctaaacatagggggtcacttttgtcattttttttaataggaggccaaaatcgcaacattttaaaactta 31210818  T
Q  210 aggggcgaaaagtggagtttagcct 234  Q
      |||||||||||| ||||||||||    
T  31210817 gagggcgaaaagtgaagtttagcct 31210793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 18 - 235
Target Start/End: Original strand, 14572259 - 14572482
Alignment:
Q  18 cctttcagcccaaaattgctaagaagatgccatatgtcctagaaaaggggtcataatcgcaactttttgttaagataacgggtcaaaaaacatatttccc 117  Q
    ||||||| || ||||||||| ||||||||||| |||||| | |||| ||| ||||||||||||||||| | ||||||| |||||||||| ||||||||||    
T  14572259 cctttcatccaaaaattgctgagaagatgccacatgtcccaaaaaaagggccataatcgcaactttttataaagataaggggtcaaaaagcatatttccc 14572358  T
Q  118 ttatgttagggggtcaaaagagcatatttccc------agggggtcacttttgccannnnnnnnaataggggccaaaatcgcaaaattttgaaacttaag 211  Q
    ||||||||||  ||||||||||||||||||||        ||||||||||||||||        |   ||||||||||| |||| ||||| |||||||      
T  14572359 ttatgttaggatgtcaaaagagcatatttccctaaacataggggtcacttttgccatttttttaatagggggccaaaattgcaatattttaaaacttaga 14572458  T
Q  212 gggcgaaaagtggagtttagccta 235  Q
    |||||||||||||| |||||||||    
T  14572459 gggcgaaaagtggactttagccta 14572482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 21 - 149
Target Start/End: Original strand, 35102575 - 35102703
Alignment:
Q  21 ttcagcccaaaattgctaagaagatgccatatgtcctagaaaaggggtcataatcgcaactttttgttaagataacgggtcaaaaaacatatttccctta 120  Q
    |||| |||||||||||| |||||| ||||  ||||| | |||||||| |||||| |||||||||||| ||||||| |||||||||| |||||||||||||    
T  35102575 ttcatcccaaaattgctgagaagacgccacgtgtcccaaaaaaggggccataattgcaactttttgtaaagataaggggtcaaaaagcatatttccctta 35102674  T
Q  121 tgttagggggtcaaaagagcatatttccc 149  Q
    ||||||| |||||||||||||||||||||    
T  35102675 tgttaggaggtcaaaagagcatatttccc 35102703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 29 - 149
Target Start/End: Complemental strand, 25819896 - 25819776
Alignment:
Q  29 aaaattgctaagaagatgccatatgtcctagaaaaggggtcataatcgcaactttttgttaagataacgggtcaaaaaacatatttcccttatgttaggg 128  Q
    ||||||||| |||||| ||||  ||||| | |||||||||||||||||||||||||||| ||||||| |||||||||| ||||||||||||||||||||     
T  25819896 aaaattgctgagaagacgccacgtgtcccaaaaaaggggtcataatcgcaactttttgtaaagataaggggtcaaaaagcatatttcccttatgttagga 25819797  T
Q  129 ggtcaaaagagcatatttccc 149  Q
    ||||| ||||| |||||||||    
T  25819796 ggtcagaagagtatatttccc 25819776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 29 - 149
Target Start/End: Original strand, 18749188 - 18749308
Alignment:
Q  29 aaaattgctaagaagatgccatatgtcctagaaaaggggtcataatcgcaactttttgttaagataacgggtcaaaaaacatatttcccttatgttaggg 128  Q
    ||||||| |||||||| |||| |||||| | |||||||| ||||||| ||||||||||| ||||||| |||||||||| |||||||||||||||||| |     
T  18749188 aaaattgataagaagaagccacatgtcccaaaaaaggggacataatcacaactttttgtaaagataaggggtcaaaaagcatatttcccttatgttatga 18749287  T
Q  129 ggtcaaaagagcatatttccc 149  Q
    ||||||| || ||||||||||    
T  18749288 ggtcaaatgaacatatttccc 18749308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 28 - 149
Target Start/End: Complemental strand, 15298697 - 15298577
Alignment:
Q  28 caaaattgctaagaagatgccatatgtcctagaaaaggggtcataatcgcaactttttgttaagataacgggtcaaaaaacatatttcccttatgttagg 127  Q
    |||||||||| |||||| ||||  ||||| | ||||||   ||||||||||||||||||| ||||||| || ||||||||||||||| ||||||||||||    
T  15298697 caaaattgctgagaagacgccacttgtcccaaaaaaggac-cataatcgcaactttttgtaaagataagggatcaaaaaacatattttccttatgttagg 15298599  T
Q  128 gggtcaaaagagcatatttccc 149  Q
     |||||||||||||||||||||    
T  15298598 aggtcaaaagagcatatttccc 15298577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 28 - 233
Target Start/End: Complemental strand, 22269619 - 22269410
Alignment:
Q  28 caaaattgctaagaagatgccatatgtcctagaaaaggggtcataatcgcaactttttgttaagataacgggtcaaaaaacatatttcccttatgttagg 127  Q
    |||||||| | |||||| ||||  ||||| | |||||||| ||||| | ||||||||||| ||||||| |||||||||||||||||||||||||||||      
T  22269619 caaaattgttgagaagacgccacgtgtcccaaaaaaggggccataaacacaactttttgtaaagataaggggtcaaaaaacatatttcccttatgtta-a 22269521  T
Q  128 gggtcaaaagagcatatttccc------agggggtcacttttgccannnnnnnnaatag-gggccaaaatcgcaaaattttgaaacttaaggggcgaaaa 220  Q
    ||||||||||| ||||||||||        ||||||||||||||||        ||||| ||||||||||||||| |||||||||||||  || ||||||    
T  22269520 gggtcaaaagaacatatttccctaaacataggggtcacttttgcca--ttttttaatagagggccaaaatcgcaatattttgaaacttagaggacgaaaa 22269423  T
Q  221 gtggagtttagcc 233  Q
    ||| |||||||||    
T  22269422 gtgcagtttagcc 22269410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 62 - 232
Target Start/End: Original strand, 4013791 - 4013968
Alignment:
Q  62 aaggggtcataatcgcaactttttgttaagataacgggtcaaaaaa-catatttcccttatgttagggggtcaaaagagcatatttccc------agggg 154  Q
    |||||| |||||||||||| |||||  ||||||| ||||||||| | |||||||||||||| |||||||||||||||||||||||||||       ||||    
T  4013791 aaggggccataatcgcaacattttgagaagataaggggtcaaaagatcatatttcccttatattagggggtcaaaagagcatatttccctaaacatgggg 4013890  T
Q  155 gtcacttttgccannnnnnnnaataggggccaaaatcgcaaaattttgaaacttaaggggcgaaaagtggagtttagc 232  Q
    |||||||||| ||        |   |||||||||||||||| ||||||||||||| ||| ||||||||| ||||||||    
T  4013891 gtcacttttgacatttttttaatagggggccaaaatcgcaacattttgaaacttaggggacgaaaagtgcagtttagc 4013968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 26 - 146
Target Start/End: Original strand, 19282302 - 19282420
Alignment:
Q  26 cccaaaattgctaagaagatgccatatgtcctagaaaaggggtcataatcgcaactttttgttaagataacgggtcaaaaaacatatttcccttatgtta 125  Q
    |||||||||||| |||||| | || |||||| |  ||||||||||||||||||||||||||  ||||||| |||||||||  ||||||||||||||||||    
T  19282302 cccaaaattgctgagaagaagtcacatgtccaa--aaaggggtcataatcgcaactttttgaaaagataaggggtcaaaatgcatatttcccttatgtta 19282399  T
Q  126 gggggtcaaaagagcatattt 146  Q
    || | |||||| |||||||||    
T  19282400 ggagttcaaaatagcatattt 19282420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 39 - 148
Target Start/End: Complemental strand, 26240159 - 26240048
Alignment:
Q  39 agaagatgccatatgtcctagaaaaggggtcataatcgcaactttttgttaagataacgggtcaaaa-aacatatttcccttatgtt-agggggtcaaaa 136  Q
    |||||| ||||  ||||||| ||||||||||||||| ||||||||||   ||||||| ||||||||| | ||||||||||||||||| ||||||||||||    
T  26240159 agaagacgccacgtgtcctataaaaggggtcataattgcaacttttttagaagataaggggtcaaaagatcatatttcccttatgttaagggggtcaaaa 26240060  T
Q  137 gagcatatttcc 148  Q
    ||||||||||||    
T  26240059 gagcatatttcc 26240048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 78 - 149
Target Start/End: Original strand, 32682419 - 32682490
Alignment:
Q  78 aactttttgttaagataacgggtcaaaaaacatatttcccttatgttagggggtcaaaagagcatatttccc 149  Q
    |||||||||| ||||||| |||||||||||||||||||| |||||||| | |||||||||||||||||||||    
T  32682419 aactttttgtaaagataaggggtcaaaaaacatatttcctttatgttatgaggtcaaaagagcatatttccc 32682490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 28 - 137
Target Start/End: Original strand, 12291508 - 12291618
Alignment:
Q  28 caaaattgctaagaagatgccatatgtcctagaaaaggggtcataatcgcaactttttgttaagataacgggtcaaaa-aacatatttcccttatgttag 126  Q
    |||||||| | |||||| ||||| ||||| | || ||  ||||||||||||||||||||  ||||||| ||||||||| | |||||||||||||||||||    
T  12291508 caaaattgttgagaagacgccatgtgtcccaaaacagatgtcataatcgcaactttttgagaagataaagggtcaaaagatcatatttcccttatgttag 12291607  T
Q  127 ggggtcaaaag 137  Q
    |||||||||||    
T  12291608 ggggtcaaaag 12291618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 106 - 233
Target Start/End: Original strand, 18749297 - 18749432
Alignment:
Q  106 aacatatttcccttatgttagggggtcaaaagagcatatttccc-------agggggtcacttttgccannnnnnnnaata-ggggccaaaatcgcaaaa 197  Q
    |||||||||||||||||||| | |||||||||||||||||||||       ||||||||||||||||||        |||| |||| ||||||||||| |    
T  18749297 aacatatttcccttatgttaagaggtcaaaagagcatatttccctaaacatagggggtcacttttgccattttttttaatagggggtcaaaatcgcaaca 18749396  T
Q  198 ttttgaaacttaaggggcgaaaagtggagtttagcc 233  Q
    ||||||||||||  |||||||||||| |||||||||    
T  18749397 ttttgaaacttagagggcgaaaagtgaagtttagcc 18749432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 29 - 149
Target Start/End: Original strand, 24615785 - 24615905
Alignment:
Q  29 aaaattgctaagaagatgccatatgtcctagaaa-aggggtcataatcgcaactttttgttaagataacgggtcaaaaaacatatttcccttatgttagg 127  Q
    ||||||||| |||| | |||| |||||| | ||| | |||||||||||||||||||| || |||| || |||||||||| |||||||| | ||||||| |    
T  24615785 aaaattgctgagaaaacgccacatgtcccaaaaataagggtcataatcgcaacttttagtaaagagaatgggtcaaaaagcatatttctcatatgtta-g 24615883  T
Q  128 gggtcaaaagagcatatttccc 149  Q
    ||||||||||||||||||||||    
T  24615884 gggtcaaaagagcatatttccc 24615905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 26 - 105
Target Start/End: Original strand, 23124809 - 23124888
Alignment:
Q  26 cccaaaattgctaagaagatgccatatgtcctagaaaaggggtcataatcgcaactttttgttaagataacgggtcaaaa 105  Q
    |||||| ||||| |||||| |||| |||||||  |||||||||||||||||||||||||||| ||||||| |||||||||    
T  23124809 cccaaacttgctgagaagacgccacatgtcctcaaaaaggggtcataatcgcaactttttgtaaagataaggggtcaaaa 23124888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 27 - 105
Target Start/End: Original strand, 20863818 - 20863896
Alignment:
Q  27 ccaaaattgctaagaagatgccatatgtcctagaaaaggggtcataatcgcaactttttgttaagataacgggtcaaaa 105  Q
    ||||||||||| |||||| ||||| ||||| | |||||||| ||||||||||||||||||| ||||||| |||||||||    
T  20863818 ccaaaattgctgagaagacgccatgtgtcccaaaaaaggggccataatcgcaactttttgtaaagataaggggtcaaaa 20863896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 18 - 149
Target Start/End: Complemental strand, 9241875 - 9241745
Alignment:
Q  18 cctttcagcccaaaattgctaagaagatgccatatgtcctagaaaaggggtcataatcgcaactttttgttaagataacgggtcaaaa-aacatatttcc 116  Q
    |||||||  |||||||| || |||||  ||||| ||||| | || || || ||||||||||||||||||  ||||||| ||||||||| | |||||||||    
T  9241875 cctttcattccaaaattactgagaaggcgccatgtgtcccaaaacagagggcataatcgcaactttttgagaagataaggggtcaaaagatcatatttcc 9241776  T
Q  117 cttatgttagggggtcaaaagagcatatttccc 149  Q
    |||||||||  ||||||||||| ||||||||||    
T  9241775 cttatgtta--gggtcaaaagaacatatttccc 9241745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 54 - 129
Target Start/End: Complemental strand, 2636964 - 2636888
Alignment:
Q  54 tcctagaaaaggggtcataatcgcaactttttgttaagataacgggtcaaaa-aacatatttcccttatgttagggg 129  Q
    ||||||||| |||||||||||||||||||||||| || |||| ||||||||| | ||||||| ||||||||||||||    
T  2636964 tcctagaaagggggtcataatcgcaactttttgtaaaaataaggggtcaaaatagcatatttaccttatgttagggg 2636888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 74 - 149
Target Start/End: Complemental strand, 4371065 - 4370990
Alignment:
Q  74 tcgcaactttttgttaagataacgggtcaaaaaa-catatttcccttatgttagggggtcaaaagagcatatttccc 149  Q
    |||||||||||||| ||||||| ||||||||  | |||||||||||||||||||||| |||||||||||||||||||    
T  4371065 tcgcaactttttgtaaagataaggggtcaaaggagcatatttcccttatgttagggg-tcaaaagagcatatttccc 4370990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 28 - 149
Target Start/End: Complemental strand, 12427446 - 12427323
Alignment:
Q  28 caaaattgctaagaagatgccatatgtcctagaaaaggggtcataatcgcaacttttt-gttaagataacgggtcaaaaaa-catatttcccttatgtta 125  Q
    |||||||||| |||||||| ||  ||||| | | || |||||| |||||||||||||| || ||||||| |||| |||||| ||||||||| ||||||||    
T  12427446 caaaattgctgagaagatggcacgtgtcccaaagaatgggtcaaaatcgcaacttttttgtaaagataaagggtaaaaaaaacatatttcctttatgtta 12427347  T
Q  126 gggggtcaaaagagcatatttccc 149  Q
      || |||||||||||||||||||    
T  12427346 atggttcaaaagagcatatttccc 12427323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 26 - 149
Target Start/End: Original strand, 16415421 - 16415543
Alignment:
Q  26 cccaaaattgctaagaagatgccatatgtcctagaaaaggggtcataatcgcaactttttgttaagataacgggtcaaaaaa-catatttcccttatgtt 124  Q
    |||||||||||| |||||| | |||  || ||| |||| |||| ||||||||||||||||   |||||||  |||||||| | |||||||||||||||||    
T  16415421 cccaaaattgctgagaagacgacat--gttctaaaaaatgggttataatcgcaacttttttagaagataagcggtcaaaatatcatatttcccttatgtt 16415518  T
Q  125 agggggtcaaaagagcatatttccc 149  Q
    ||| ||||||||||  |||||||||    
T  16415519 aggcggtcaaaagaatatatttccc 16415543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 180 - 236
Target Start/End: Complemental strand, 18749150 - 18749094
Alignment:
Q  180 ggggccaaaatcgcaaaattttgaaacttaaggggcgaaaagtggagtttagcctat 236  Q
    ||||||||||| |||| ||||| |||| |||||||||||||||| ||||||||||||    
T  18749150 ggggccaaaattgcaacattttaaaacataaggggcgaaaagtgcagtttagcctat 18749094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 108 - 149
Target Start/End: Original strand, 2058993 - 2059034
Alignment:
Q  108 catatttcccttatgttagggggtcaaaagagcatatttccc 149  Q
    ||||||||||||||||||||| ||||||| ||||||||||||    
T  2058993 catatttcccttatgttagggtgtcaaaatagcatatttccc 2059034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 69 - 136
Target Start/End: Complemental strand, 34528320 - 34528252
Alignment:
Q  69 cataatcgcaactttttgttaagataacgggtcaaaa-aacatatttcccttatgttagggggtcaaaa 136  Q
    ||||||||||||||||||  ||||||| ||||||||| | ||||||||  ||||||||||||| |||||    
T  34528320 cataatcgcaactttttgagaagataaggggtcaaaagatcatatttcatttatgttagggggccaaaa 34528252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 176 - 238
Target Start/End: Complemental strand, 4597463 - 4597400
Alignment:
Q  176 aatagggg-ccaaaatcgcaaaattttgaaacttaaggggcgaaaagtggagtttagcctatat 238  Q
    |||||||| |||||||||||| |||||||||| || ||||||||||||| | |||| |||||||    
T  4597463 aataggggaccaaaatcgcaacattttgaaacatagggggcgaaaagtgcactttatcctatat 4597400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 180 - 235
Target Start/End: Complemental strand, 35102544 - 35102489
Alignment:
Q  180 ggggccaaaatcgcaaaattttgaaacttaaggggcgaaaagtggagtttagccta 235  Q
    ||||| |||||||||| |||||||||| || ||||||||||||| | |||||||||    
T  35102544 ggggctaaaatcgcaacattttgaaacatagggggcgaaaagtgcactttagccta 35102489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 185 - 243
Target Start/End: Original strand, 34834180 - 34834238
Alignment:
Q  185 caaaatcgcaaaattttgaaacttaaggggcgaaaagtggagtttagcctatattttat 243  Q
    ||||||||||| ||||| |||| |||||||||||||||| | |||||||| | ||||||    
T  34834180 caaaatcgcaatattttaaaacataaggggcgaaaagtgcactttagcctttcttttat 34834238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 180 - 234
Target Start/End: Original strand, 35102714 - 35102768
Alignment:
Q  180 ggggccaaaatcgcaaaattttgaaacttaaggggcgaaaagtggagtttagcct 234  Q
    ||||||||||| |||| |||||||||||||  |||||||||||| |||| |||||    
T  35102714 ggggccaaaattgcaacattttgaaacttagagggcgaaaagtgaagttgagcct 35102768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 28 - 85
Target Start/End: Original strand, 2058925 - 2058982
Alignment:
Q  28 caaaattgctaagaagatgccatatgtcctagaaaaggggtcataatcgcaacttttt 85  Q
    |||||||||| |||||| || | |||||||| || ||||||||||||| |||||||||    
T  2058925 caaaattgctgagaagacgctacatgtcctaaaacaggggtcataatcccaacttttt 2058982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 180 - 241
Target Start/End: Original strand, 3118928 - 3118989
Alignment:
Q  180 ggggccaaaatcgcaaaattttgaaacttaaggggcgaaaagtggagtttagcctatatttt 241  Q
    ||||||||||||  || ||| |||||| || ||||||||||||| |||||||||||| ||||    
T  3118928 ggggccaaaatcataacattatgaaacatagggggcgaaaagtgcagtttagcctatttttt 3118989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 180 - 241
Target Start/End: Original strand, 7316342 - 7316403
Alignment:
Q  180 ggggccaaaatcgcaaaattttgaaacttaaggggcgaaaagtggagtttagcctatatttt 241  Q
    ||||||||||| ||||  |||||||| |||||||| |||||||| | |||||||||| ||||    
T  7316342 ggggccaaaattgcaagtttttgaaagttaaggggggaaaagtgcactttagcctatttttt 7316403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 179 - 220
Target Start/End: Complemental strand, 12291471 - 12291430
Alignment:
Q  179 aggggccaaaatcgcaaaattttgaaacttaaggggcgaaaa 220  Q
    ||||||||||||||||| ||||||||||||| ||| ||||||    
T  12291471 aggggccaaaatcgcaacattttgaaacttaggggacgaaaa 12291430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 111; Significance: 5e-56; HSPs: 49)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 111; E-Value: 5e-56
Query Start/End: Original strand, 20 - 233
Target Start/End: Original strand, 4433266 - 4433485
Alignment:
Q  20 tttcagcccaaaattgctaagaagatgccatatgtcctagaaaaggggtcataatcgcaactttttgttaagataacgggtcaaaaaacatatttccctt 119  Q
    ||||| |||||||||||| | |||||||||  |||||||||||||||||||||||| ||||||||||| ||||||| |||||||||||||||||| ||||    
T  4433266 tttcatcccaaaattgctcataagatgccacgtgtcctagaaaaggggtcataatcacaactttttgtaaagataaggggtcaaaaaacatattttcctt 4433365  T
Q  120 atgttagggggtcaaaagagcatatttccc-------agggggtcacttttgccannnnnnnnaataggggccaaaatcgcaaaattttgaaacttaagg 212  Q
    ||||||||||||||||||||||||||||||       |||||||||||||||||         |||||||||||||||||||| ||||| |||||| |||    
T  4433366 atgttagggggtcaaaagagcatatttccctaaacatagggggtcacttttgcctttttttttaataggggccaaaatcgcaacattttaaaactt-agg 4433464  T
Q  213 ggcgaaaagtggagtttagcc 233  Q
    ||||||||||| |||||||||    
T  4433465 ggcgaaaagtgaagtttagcc 4433485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 18 - 233
Target Start/End: Complemental strand, 25011958 - 25011735
Alignment:
Q  18 cctttcagcccaaaattgctaagaagatgccatatgtcctagaaaaggggtcataatcgcaactttttgttaagataacgggtcaaaaaacatatttccc 117  Q
    |||||||  ||||||||||| |||||||||||  ||||| | ||||||| |||||||| ||||||||||| ||||||| ||||||||||||||||  |||    
T  25011958 cctttcattccaaaattgctcagaagatgccacgtgtcccaaaaaagggatcataatcccaactttttgtaaagataaggggtcaaaaaacatatccccc 25011859  T
Q  118 ttatgttagggggtcaaaagagcatatttccc-------agggggtcacttttgccannnnnnnnaata-ggggccaaaatcgcaaaattttgaaactta 209  Q
    ||||||||||||||||||||||||||||||||       ||||||||||||||||||        |||| |||||||||||||||| |||||||||||||    
T  25011858 ttatgttagggggtcaaaagagcatatttccctaaacatagggggtcacttttgccattttttttaatagggggccaaaatcgcaacattttgaaactta 25011759  T
Q  210 aggggcgaaaagtggagtttagcc 233  Q
     ||| |||||||||||||||||||    
T  25011758 ggggacgaaaagtggagtttagcc 25011735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 26 - 236
Target Start/End: Original strand, 43793720 - 43793937
Alignment:
Q  26 cccaaaattgctaagaagatgccatatgtcctagaaaaggggtcataatcgcaactttttgttaagataacgggtcaaaaaacatatttcccttatgtta 125  Q
    |||||||||||| |||||| |||| |||||| | ||||||||||||| |||||||||||||| || |||| |||||||||||||||||||||||||||||    
T  43793720 cccaaaattgctgagaagacgccacatgtcccaaaaaaggggtcatattcgcaactttttgtaaatataaggggtcaaaaaacatatttcccttatgtta 43793819  T
Q  126 gggggtcaaaagagcatatttccc-------agggggtcacttttgccannnnnnnnaataggggccaaaatcgcaaaattttgaaacttaaggggcgaa 218  Q
    || |||||||||||||||||||||       | ||||||||||||||||        |   |||||||||||||||| ||||||||||||| | ||| ||    
T  43793820 ggaggtcaaaagagcatatttccctaaacatatggggtcacttttgccatttttttaatagggggccaaaatcgcaacattttgaaacttaggcggcaaa 43793919  T
Q  219 aagtggagtttagcctat 236  Q
    ||||||||||||||||||    
T  43793920 aagtggagtttagcctat 43793937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 41 - 235
Target Start/End: Complemental strand, 55780586 - 55780385
Alignment:
Q  41 aagatgccatatgtcctagaaaaggggtcataatcgcaactttttgttaagataacgggtcaaaaaacatatttcccttatgttagggggtcaaaagagc 140  Q
    |||||||||  |||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||| ||||| |||| ||||||||||||||    
T  55780586 aagatgccacgtgtcctagaaaaggggtcataatcgcaactttttgtaaagataaggggtcaaaaaacatattttccttaggtta-ggggtcaaaagagc 55780488  T
Q  141 atatttccc-------agggggtcacttttgccannnnnnnnaata-ggggccaaaatcgcaaaattttgaaacttaaggggcgaaaagtggagtttagc 232  Q
    |||||||||       ||||||||||||||||||        |||| |||||||||||||||| ||||  |||||||||||||||||| || ||||||||    
T  55780487 atatttccctaaacatagggggtcacttttgccattttttttaatagggggccaaaatcgcaacatttgaaaacttaaggggcgaaaaatgaagtttagc 55780388  T
Q  233 cta 235  Q
    |||    
T  55780387 cta 55780385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 41 - 235
Target Start/End: Complemental strand, 55844766 - 55844565
Alignment:
Q  41 aagatgccatatgtcctagaaaaggggtcataatcgcaactttttgttaagataacgggtcaaaaaacatatttcccttatgttagggggtcaaaagagc 140  Q
    |||||||||  |||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||| ||||| |||| ||||||||||||||    
T  55844766 aagatgccacgtgtcctagaaaaggggtcataatcgcaactttttgtaaagataaggggtcaaaaaacatattttccttaggtta-ggggtcaaaagagc 55844668  T
Q  141 atatttccc-------agggggtcacttttgccannnnnnnnaata-ggggccaaaatcgcaaaattttgaaacttaaggggcgaaaagtggagtttagc 232  Q
    |||||||||       ||||||||||||||||||        |||| |||||||||||||||| ||||  |||||||||||||||||| || ||||||||    
T  55844667 atatttccctaaacatagggggtcacttttgccattttttttaatagggggccaaaatcgcaacatttgaaaacttaaggggcgaaaaatgaagtttagc 55844568  T
Q  233 cta 235  Q
    |||    
T  55844567 cta 55844565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 29 - 234
Target Start/End: Original strand, 13397767 - 13397980
Alignment:
Q  29 aaaattgctaagaagatgccatatgtcctagaaaaggggtcataatcgcaactttttgttaagataacgggtcaaaaaacatatttcccttatgttaggg 128  Q
    ||||||||| |||||| ||||  ||||| | |||||||| ||||||||||||||||||| ||||||| |||||||||| ||||||||||||||||||||     
T  13397767 aaaattgctgagaagacgccacgtgtcccaaaaaaggggccataatcgcaactttttgtaaagataaggggtcaaaaagcatatttcccttatgttagga 13397866  T
Q  129 ggtcaaaagagcatatttccc-------agggggtcacttttgccannnnnnnnaata-ggggccaaaatcgcaaaattttgaaacttaaggggcgaaaa 220  Q
    |||||||||||||||||||||       ||||||||||||||||||        |||| ||||||||||| |||| |||||||||||||  |||||||||    
T  13397867 ggtcaaaagagcatatttccctaaacatagggggtcacttttgccattttttttaatagggggccaaaattgcaatattttgaaacttagagggcgaaaa 13397966  T
Q  221 gtggagtttagcct 234  Q
    ||| ||||||||||    
T  13397967 gtgaagtttagcct 13397980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 18 - 233
Target Start/End: Original strand, 19232424 - 19232648
Alignment:
Q  18 cctttcagcccaaaattgctaagaagatgccatatgtcctagaaaaggggtcataatcgcaactttttgttaagataacgggt-caaaaaacatatttcc 116  Q
    ||||||| |||||||||||| |||||||||||  ||||| |||||||||||||||||||||||||||||| ||||||| ||||  ||||||||||||| |    
T  19232424 cctttcatcccaaaattgctcagaagatgccacgtgtcccagaaaaggggtcataatcgcaactttttgtaaagataaggggtaaaaaaaacatattttc 19232523  T
Q  117 cttatgttagggggtcaaaagagcatatttccc-------agggggtcacttttgccannnnnnnnaatagg-ggccaaaatcgcaaaattttgaaactt 208  Q
    |||||||||||| ||||||||||||||||||||       | ||| ||||||||||||        |||||| | |||||||| ||| ||||||||||||    
T  19232524 cttatgttagggagtcaaaagagcatatttccctaaacatatgggatcacttttgccattttttttaataggtgaccaaaatcacaacattttgaaactt 19232623  T
Q  209 aaggggcgaaaagtggagtttagcc 233  Q
    | ||||| |||||||||||||||||    
T  19232624 agggggcaaaaagtggagtttagcc 19232648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 20 - 235
Target Start/End: Complemental strand, 35475510 - 35475289
Alignment:
Q  20 tttcagcccaaaattgctaagaagatgccatatgtcctagaaaaggggtcataatcgcaactttttgttaagataacgggtcaaaaaacatatttccctt 119  Q
    ||||| || ||||||||| |||||| ||||  ||||| | |||||||||||||||||| ||||||||| ||||||| |||||||||||||||||||||||    
T  35475510 tttcatcctaaaattgctgagaagacgccacgtgtcccaaaaaaggggtcataatcgctactttttgtaaagataaggggtcaaaaaacatatttccctt 35475411  T
Q  120 atgttagggggtcaaaagagcatatttcc-----cagggggtcacttttgccannnnnnnnaataggg-gccaaaatcgcaaaattttgaaacttaaggg 213  Q
    |||||||| ||||||||||||||||||||     ||  |||||||||||||||        ||||||| ||||||||||||| ||||| |||||||  ||    
T  35475410 atgttaggaggtcaaaagagcatatttccctaaacatagggtcacttttgccattttttttaatagggagccaaaatcgcaacattttaaaacttagagg 35475311  T
Q  214 gcgaaaagtggagtttagccta 235  Q
    ||||||| || |||||||||||    
T  35475310 gcgaaaaatgaagtttagccta 35475289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 18 - 235
Target Start/End: Original strand, 9195744 - 9195968
Alignment:
Q  18 cctttcagcccaaaattgct-aagaagatgccatatgtcctagaaaaggggtcataatcgcaactttttgttaagataacgggtcaaaaaacatatttcc 116  Q
    ||||||| |||| ||||||| || ||| |||||  ||| |||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||    
T  9195744 cctttcatcccataattgctcaaaaaggtgccacgtgttctagaaaaggggtcataatcgcaactttttgtaaagataaggggtcaaaaaacatatttcc 9195843  T
Q  117 cttatgttagggggtcaaaagagcatatttccc-------agggggtcacttttgccannnnnnnnaatagggg-ccaaaatcgcaaaattttgaaactt 208  Q
    |||||||||  ||||||||||||||||||||||       ||||||||||||||| ||        |||||||| |||||||||||| ||||||||| ||    
T  9195844 cttatgtta-tgggtcaaaagagcatatttccctaaacatagggggtcacttttgtca-tttttttaataggggaccaaaatcgcaacattttgaaattt 9195941  T
Q  209 aaggggcgaaaagtggagtttagccta 235  Q
    | |||||||||||||| ||||||||||    
T  9195942 agggggcgaaaagtggtgtttagccta 9195968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 29 - 235
Target Start/End: Original strand, 41877120 - 41877330
Alignment:
Q  29 aaaattgctaagaagatgccatatgtcctagaaaaggggtcataatcgcaactttttgttaagataacgggtcaaaaaacatatttcccttatgttaggg 128  Q
    ||||||||| | |||| ||||  ||||||| ||||||||||||||||||||||||  || ||||||| |||||||||| ||||||||||||||||||||     
T  41877120 aaaattgctgaaaagacgccacgtgtcctaaaaaaggggtcataatcgcaacttt--gtaaagataaggggtcaaaaagcatatttcccttatgttagga 41877217  T
Q  129 ggtcaaaagagcatatttccc-------agggggtcacttttgccannnnnnnnaataggg-gccaaaatcgcaaaattttgaaacttaaggggcgaaaa 220  Q
    |||||||||||||||||||||       ||||||||||||||||||        ||||||| ||||||||||||| |||||||||||||  |||||||||    
T  41877218 ggtcaaaagagcatatttccctaaacatagggggtcacttttgcca--ttttttaatagggagccaaaatcgcaacattttgaaacttagagggcgaaaa 41877315  T
Q  221 gtggagtttagccta 235  Q
    ||| |||||||||||    
T  41877316 gtgaagtttagccta 41877330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 21 - 234
Target Start/End: Original strand, 6789042 - 6789263
Alignment:
Q  21 ttcagcccaaaattgctaagaagatgccatatgtcctagaaaaggggtcataatcgcaactttttgttaagataacgggtcaaaaaacatatttccctta 120  Q
    |||| ||||||||||||||||||| ||||  ||||| | |||| ||| ||||||||||| ||||||| |||||||||||||||||||||| |||| || |    
T  6789042 ttcatcccaaaattgctaagaagacgccacgtgtcccaaaaaaaggggcataatcgcaattttttgtaaagataacgggtcaaaaaacatttttctctca 6789141  T
Q  121 tgttagggggtcaaaagagcatatttccc-------agggggtcacttttgccannnnnnnnaata-ggggccaaaatcgcaaaattttgaaacttaagg 212  Q
    ||||||| |||| ||| ||||||||||||       ||||||||||||||||||        || | |||||||||||||||| |||||||||||||| |    
T  6789142 tgttaggaggtcgaaacagcatatttccctaaacatagggggtcacttttgccattttatttaacagggggccaaaatcgcaacattttgaaacttaaag 6789241  T
Q  213 ggcgaaaagtggagtttagcct 234  Q
    ||||||||||| ||||||||||    
T  6789242 ggcgaaaagtgaagtttagcct 6789263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 18 - 149
Target Start/End: Original strand, 13826500 - 13826631
Alignment:
Q  18 cctttcagcccaaaattgctaagaagatgccatatgtcctagaaaaggggtcataatcgcaactttttgttaagataacgggtcaaaaaacatatttccc 117  Q
    ||||||| |||||||||||| |||||| ||||  ||||| | ||||||||  |||||||||||||||||| ||||||| |||||||||| ||||||||||    
T  13826500 cctttcatcccaaaattgctgagaagacgccacgtgtcccaaaaaaggggctataatcgcaactttttgtaaagataaggggtcaaaaagcatatttccc 13826599  T
Q  118 ttatgttagggggtcaaaagagcatatttccc 149  Q
    |||||||||| |||||||||||||||||||||    
T  13826600 ttatgttaggaggtcaaaagagcatatttccc 13826631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 18 - 149
Target Start/End: Original strand, 15058899 - 15059030
Alignment:
Q  18 cctttcagcccaaaattgctaagaagatgccatatgtcctagaaaaggggtcataatcgcaactttttgttaagataacgggtcaaaaaacatatttccc 117  Q
    ||||||| |||||||||||| |||||| ||||  ||||| | ||||||||  |||||||||||||||||| ||||||| |||||||||| ||||||||||    
T  15058899 cctttcatcccaaaattgctgagaagacgccacgtgtcccaaaaaaggggctataatcgcaactttttgtaaagataaggggtcaaaaagcatatttccc 15058998  T
Q  118 ttatgttagggggtcaaaagagcatatttccc 149  Q
    |||||||||| |||||||||||||||||||||    
T  15058999 ttatgttaggaggtcaaaagagcatatttccc 15059030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 29 - 233
Target Start/End: Complemental strand, 4357464 - 4357252
Alignment:
Q  29 aaaattgctaagaagatgccatatgtcctagaaaaggggtcataatcgcaactttttgttaagataacgggtcaaaaaacatatttcccttatgttaggg 128  Q
    ||||||||| |||||| ||||  ||||| | |||| ||| ||||||||||||||||||| ||||||| |||||||||| |||||||||||||||||||      
T  4357464 aaaattgctgagaagacgccaggtgtcccaaaaaaagggccataatcgcaactttttgtaaagataaggggtcaaaaagcatatttcccttatgttagaa 4357365  T
Q  129 ggtcaaaagagcatatttccc-------agggggtcacttttgccannnnnnnnaataggg-gccaaaatcgcaaaattttgaaacttaaggggcgaaaa 220  Q
    |||||||||||||||||||||       |||| |||||||||||||        ||||||| || |||||||||| |||||||||||||  |||||||||    
T  4357364 ggtcaaaagagcatatttccctaaatatagggtgtcacttttgccattttttttaatagggagctaaaatcgcaacattttgaaacttagagggcgaaaa 4357265  T
Q  221 gtggagtttagcc 233  Q
    ||| |||||||||    
T  4357264 gtgaagtttagcc 4357252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 20 - 149
Target Start/End: Complemental strand, 27018435 - 27018306
Alignment:
Q  20 tttcagcccaaaattgctaagaagatgccatatgtcctagaaaaggggtcataatcgcaactttttgttaagataacgggtcaaaaaacatatttccctt 119  Q
    ||||| |||||||||||| |||||| ||||  ||||| | |||||||| |||||| |||||||||||| | ||||| |||||||||||||||||||||||    
T  27018435 tttcatcccaaaattgctgagaagacgccacgtgtcccaaaaaaggggccataattgcaactttttgtaaggataaggggtcaaaaaacatatttccctt 27018336  T
Q  120 atgttagggggtcaaaagagcatatttccc 149  Q
     |||||||||||||||||||||||||||||    
T  27018335 ttgttagggggtcaaaagagcatatttccc 27018306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 28 - 235
Target Start/End: Original strand, 5304438 - 5304651
Alignment:
Q  28 caaaattgctaagaagatgccatatgtcctagaaaaggggtcataatcgcaactttttgttaagataacgggtcaaaaaacatatttcccttatgttagg 127  Q
    |||||||||| |||||| ||||  ||||| | |||| ||| ||||||||||||||||||| ||||||| |||||||||| ||||||| ||||||||||||    
T  5304438 caaaattgctgagaagacgccacgtgtcccaaaaaatgggccataatcgcaactttttgtaaagataaggggtcaaaaagcatattttccttatgttagg 5304537  T
Q  128 gggtcaaaagagcatatttccc------agggggtcacttttgccannnnnnnnaatag-gggccaaaatcgcaaaattttgaaacttaaggggcgaaaa 220  Q
     |||||||||||||||||||||        ||||||||||||||||        ||||| ||| ||||||||||| |||||||||||||  |||||||||    
T  5304538 aggtcaaaagagcatatttccctaaacataggggtcacttttgcca-tttttttaatagagggtcaaaatcgcaacattttgaaacttagagggcgaaaa 5304636  T
Q  221 gtggagtttagccta 235  Q
    ||| |||||||||||    
T  5304637 gtgaagtttagccta 5304651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 70 - 236
Target Start/End: Original strand, 1588546 - 1588719
Alignment:
Q  70 ataatcgcaactttttgttaagataacgggtcaaaaaacatatttcccttatgttagggggtcaaaagagcatatttccc-------agggggtcacttt 162  Q
    |||||||||||||||||| ||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||       ||| |||||||||    
T  1588546 ataatcgcaactttttgtaaagataaggggtcaaaaaacatatttcccttatgtta-ggggtcaaaagagcatatttccctaaacataggaggtcacttt 1588644  T
Q  163 tgccannnnnnnnaata-ggggccaaaatcgcaaaattttgaaacttaaggggcgaaaagtggagtttagcctat 236  Q
    | |||        |||| | ||| |||||||||| ||||| ||||||||||| ||||||||||||||||||||||    
T  1588645 ttccatttttttaaatatgaggcgaaaatcgcaacattttaaaacttaagggacgaaaagtggagtttagcctat 1588719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 52 - 235
Target Start/End: Complemental strand, 45633626 - 45633436
Alignment:
Q  52 tgtcctagaaaaggggtcataatcgcaactttttgttaagataacgggtcaaaaaa-catatttcccttatgttagggggtcaaaagagcatatttccc- 149  Q
    ||||||| |||| ||||||||||| |||||||||   ||||||| ||||||||| | ||||||||| |||||||||| |||||| ||||||||||||||     
T  45633626 tgtcctaaaaaaagggtcataatcacaacttttttaaaagataaggggtcaaaagagcatatttcc-ttatgttaggcggtcaatagagcatatttccct 45633528  T
Q  150 ------agggggtcacttttgccannnnnnnnaataggggccaaaatcgcaaaattttgaaacttaaggggcgaaaagtggagtttagccta 235  Q
          |||| |||||||||||||        |||||||| ||||||||||| ||||||||||||| ||||||||||||| |||||||||||    
T  45633527 aaacatagggagtcacttttgccattttttttaataggggtcaaaatcgcaatattttgaaacttagggggcgaaaagtgtagtttagccta 45633436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 28 - 149
Target Start/End: Original strand, 51291260 - 51291382
Alignment:
Q  28 caaaattgctaagaagatgccatatgtcctagaaaaggggtcataatcgcaactttttgttaagataacgggtcaaaaaa-catatttcccttatgttag 126  Q
    |||||||| | |||||| |||| |||||| | |||||||| ||||||| ||||||||||  ||||||| ||||||||| | |||||||||||||||||||    
T  51291260 caaaattggtgagaagacgccacatgtcccaaaaaaggggccataatcacaactttttgagaagataaggggtcaaaagatcatatttcccttatgttag 51291359  T
Q  127 ggggtcaaaagagcatatttccc 149  Q
    |||||||||||| ||||||||||    
T  51291360 ggggtcaaaagaacatatttccc 51291382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 26 - 146
Target Start/End: Complemental strand, 15795532 - 15795412
Alignment:
Q  26 cccaaaattgctaagaagatgccatatgtcctagaaaaggggtcataatcgcaactttttgttaagataacgggtcaaaaaacatatttcccttatgtta 125  Q
    |||||||||| | |||||| |||| |||||||| |||| ||||||||||| ||||||||||  |||||||  ||||||||| | ||||||||||||||||    
T  15795532 cccaaaattgatgagaagacgccacatgtcctaaaaaatgggtcataatcccaactttttgaaaagataaaaggtcaaaaagcctatttcccttatgtta 15795433  T
Q  126 gggggtcaaaagagcatattt 146  Q
    || | ||||||||||||||||    
T  15795432 ggagttcaaaagagcatattt 15795412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 70 - 235
Target Start/End: Complemental strand, 41034807 - 41034633
Alignment:
Q  70 ataatcgcaactttttgttaagataacgggtcaaaaaacatatttcccttatgttagggggtcaaaagagcatatttccc-------agggggtcacttt 162  Q
    |||||||||||||||||| || |||| |||||||||| |||||||||||||||||||| |||||||||| ||||||||||       |||||||||||||    
T  41034807 ataatcgcaactttttgtaaaaataaggggtcaaaaagcatatttcccttatgttaggaggtcaaaagatcatatttccctgagcatagggggtcacttt 41034708  T
Q  163 tgccannnnnnnnaat-aggggccaaaatcgcaaaattttgaaac-ttaaggggcgaaaagtggagtttagccta 235  Q
    |||||        ||| ||||| |||||| |||| |||||||||| |||| | |||||||||| |||||||||||    
T  41034707 tgccattttttttaataaggggtcaaaattgcaacattttgaaactttaaagtgcgaaaagtgaagtttagccta 41034633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 60 - 233
Target Start/End: Complemental strand, 52838408 - 52838231
Alignment:
Q  60 aaaaggggtcataatcgcaactttttgttaagataacgggtcaaaaaacatatttcccttatgttagggggtcaaaagagcatatttcc------caggg 153  Q
    |||||||  ||||||||||||||||||| ||||||| |||||||||| |||||||||| ||||||||| ||||||||||||||||||||       ||||    
T  52838408 aaaagggaccataatcgcaactttttgtaaagataa-gggtcaaaaagcatatttcccgtatgttaggaggtcaaaagagcatatttcctaaacataggg 52838310  T
Q  154 ggtcacttttgccannnnnnnnaataggggccaaaatcgcaaaattttgaaacttaaggggcgaaaagtggagtttagcc 233  Q
    ||||| ||||||||        ||||| || ||||||||||| ||||| |||||||  |||||||||||| |||||||||    
T  52838309 ggtcatttttgcca-tttttttaatagaggtcaaaatcgcaacattttaaaacttagagggcgaaaagtgaagtttagcc 52838231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 26 - 150
Target Start/End: Complemental strand, 4098872 - 4098747
Alignment:
Q  26 cccaaaattgctaagaagatgccatatgtcctagaaaaggggtcataatcgcaactttttgttaagataacgggtcaaaaaa-catatttcccttatgtt 124  Q
    ||||||||||   |||||| ||||  ||||| | |||||||| | |||| |||||||||||  ||||||| ||||||||| | |||||||||||||||||    
T  4098872 cccaaaattgacgagaagacgccacgtgtcccaaaaaaggggccttaattgcaactttttgagaagataaggggtcaaaagatcatatttcccttatgtt 4098773  T
Q  125 agggggtcaaaagagcatatttccca 150  Q
    ||||||||||||||||||||||||||    
T  4098772 agggggtcaaaagagcatatttccca 4098747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 26 - 237
Target Start/End: Original strand, 24626309 - 24626524
Alignment:
Q  26 cccaaaattgctaagaagatgccatatgtcctagaaaaggggtcataatcgcaactttttgttaagataacgggtcaaaaaa-catatttcccttatgtt 124  Q
    |||||||||| ||||||||  ||| |||||| | || | ||||||||||| ||||||||||  ||||||| | ||||||| | |||||||||||||||||    
T  24626309 cccaaaattgttaagaagacaccacatgtcccaaaacatgggtcataatcacaactttttgagaagataaggagtcaaaagatcatatttcccttatgtt 24626408  T
Q  125 agggggtcaaaagagcatatttccc--agggggtcacttttgccannnnnnnnaatag-gggccaaaatcgcaaaattttgaaacttaaggggcgaaaag 221  Q
    |  | ||||||||||||||||||||  |  |||||||||||||||        ||||| || ||||||| |||| ||||| ||||||| || || |||||    
T  24626409 attgagtcaaaagagcatatttccctaaacgggtcacttttgccatttttgttaatagaggtccaaaattgcaacattttaaaacttagggagcaaaaag 24626508  T
Q  222 tggagtttagcctata 237  Q
    || |||||||||||||    
T  24626509 tgcagtttagcctata 24626524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 39 - 149
Target Start/End: Original strand, 2715819 - 2715928
Alignment:
Q  39 agaagatgccatatgtcctagaaaaggggtcataatcgcaactttttgttaagataacgggtcaaaaaacatatttcccttatgttagggggtcaaaaga 138  Q
    |||||| ||||  ||||| | |||| ||| ||||||||||||||||||| ||||||| |||||||||| |||||||||| ||||||| ||||||||||||    
T  2715819 agaagacgccacgtgtcccaaaaaatgggccataatcgcaactttttgtaaagataaggggtcaaaaagcatatttcccatatgtta-ggggtcaaaaga 2715917  T
Q  139 gcatatttccc 149  Q
     ||||||||||    
T  2715918 tcatatttccc 2715928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 72 - 244
Target Start/End: Complemental strand, 2931490 - 2931310
Alignment:
Q  72 aatcgcaactttttgttaagataacgggtcaaaaaacatatttcccttatgttagggggtcaaaagagcatatttccc-------agggggtcacttttg 164  Q
    |||||||| ||||||| ||||||| |||||||||| ||||||||| |||||||| | |||||||||||||||||||||       ||||||||||||||     
T  2931490 aatcgcaattttttgtaaagataaggggtcaaaaagcatatttcctttatgttatgaggtcaaaagagcatatttccctaaacatagggggtcactttta 2931391  T
Q  165 ccannnnnnnnaatag-gggccaaaatcgcaaaattttgaaacttaaggggcgaaaagtggagtttagcctatattttata 244  Q
    |||        ||||| |  ||||||| |||| ||||| |||||||  |||||||||||| |||||||||  |||||||||    
T  2931390 ccattttttttaatagagaaccaaaattgcaacattttaaaacttagagggcgaaaagtgaagtttagcccttattttata 2931310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 66 - 149
Target Start/End: Complemental strand, 9397367 - 9397283
Alignment:
Q  66 ggtcataatcgcaactttttgttaagataacgggtcaaaaaa-catatttcccttatgttagggggtcaaaagagcatatttccc 149  Q
    |||||||||  ||||||||||| ||||||| |||| |||||| ||||||||| ||||||||| ||||||||||||||||||||||    
T  9397367 ggtcataatgacaactttttgtaaagataaagggttaaaaaaacatatttcctttatgttagagggtcaaaagagcatatttccc 9397283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 39 - 149
Target Start/End: Complemental strand, 23362633 - 23362523
Alignment:
Q  39 agaagatgccatatgtcctagaaaaggggtcataatcgcaactttttgttaagataacgggtcaaaaaacatatttcccttatgttagggggtcaaaaga 138  Q
    |||||| || || ||||| | |||||||||||||||||||||||||||| |||||||  |   ||||| ||||||| ||||||||||  |||||||||||    
T  23362633 agaagacgcaatgtgtcccaaaaaaggggtcataatcgcaactttttgtaaagataagagactaaaaagcatattttccttatgttaaagggtcaaaaga 23362534  T
Q  139 gcatatttccc 149  Q
     ||||||||||    
T  23362533 acatatttccc 23362523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 180 - 239
Target Start/End: Original strand, 18259362 - 18259421
Alignment:
Q  180 ggggccaaaatcgcaaaattttgaaacttaaggggcgaaaagtggagtttagcctatatt 239  Q
    |||||||||||||||| ||||||||| |||  |||||||||||| |||||||||||||||    
T  18259362 ggggccaaaatcgcaacattttgaaatttagagggcgaaaagtgaagtttagcctatatt 18259421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 60 - 235
Target Start/End: Complemental strand, 15734579 - 15734398
Alignment:
Q  60 aaaaggggtcataatcgcaactttttgttaagataacgggtcaaaaaacatattt-cccttatgttagggggtcaaaagagcatatttccc-------ag 151  Q
    |||||||| ||| ||| ||||||||||| || || |||||||||||  ||||||| |||||||||||  ||||||||||| ||||||||||       ||    
T  15734579 aaaaggggccattatcacaactttttgtaaacatgacgggtcaaaaggcatatttccccttatgtta--gggtcaaaagaacatatttccctaaacatag 15734482  T
Q  152 ggggtcacttttgccannnnnnnnaatag-gggccaaaatcgcaaaattttgaaacttaaggggcgaaaagtggagtttagccta 235  Q
     |||||||||||| ||        ||||| |||||||||||| || ||||||||||||||||| ||||||||| |||||| ||||    
T  15734481 agggtcacttttgtca-tttttttaatagcgggccaaaatcgtaacattttgaaacttaagggccgaaaagtgtagtttaaccta 15734398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 234 - 305
Target Start/End: Complemental strand, 48908520 - 48908441
Alignment:
Q  234 tatattttatatgttagatttataattttggtaggatctt--------ccgattgtgactcctctcctatcgtatctgtg 305  Q
    ||||||||||||||||||| ||||||||||| ||||||||        ||||||||||||||||||||||||||| ||||    
T  48908520 tatattttatatgttagatgtataattttgggaggatcttacgatcttccgattgtgactcctctcctatcgtatttgtg 48908441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 18 - 118
Target Start/End: Original strand, 36729169 - 36729270
Alignment:
Q  18 cctttcagcccaaaattgctaagaagatgccatatgtcctagaaaaggggtcataatcgcaactttttgttaagataacgggtcaaaa-aacatatttcc 116  Q
    ||||||| ||||||||| || |||||| |||| |||||| | ||||  ||||||||||| |||||||||  ||||||| ||||||||| | |||||||||    
T  36729169 cctttcatcccaaaattactgagaagacgccacatgtcccaaaaaaaaggtcataatcgaaactttttgagaagataaggggtcaaaagatcatatttcc 36729268  T
Q  117 ct 118  Q
    ||    
T  36729269 ct 36729270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 179 - 235
Target Start/End: Complemental strand, 4433237 - 4433181
Alignment:
Q  179 aggggccaaaatcgcaaaattttgaaacttaaggggcgaaaagtggagtttagccta 235  Q
    ||||||||||||||||| ||| |||||| || ||||||||||||| |||||||||||    
T  4433237 aggggccaaaatcgcaacattatgaaacatagggggcgaaaagtgcagtttagccta 4433181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 184 - 236
Target Start/End: Complemental strand, 20919384 - 20919332
Alignment:
Q  184 ccaaaatcgcaaaattttgaaacttaaggggcgaaaagtggagtttagcctat 236  Q
    |||||||||||| ||||||||||||| ||| ||||||||| ||||||||||||    
T  20919384 ccaaaatcgcaacattttgaaacttaggggtcgaaaagtgcagtttagcctat 20919332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 186 - 233
Target Start/End: Original strand, 17138540 - 17138587
Alignment:
Q  186 aaaatcgcaaaattttgaaacttaaggggcgaaaagtggagtttagcc 233  Q
    |||||||||| ||||| ||||||| |||||||||||||||||||||||    
T  17138540 aaaatcgcaacattttaaaacttagggggcgaaaagtggagtttagcc 17138587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 180 - 235
Target Start/End: Complemental strand, 43793684 - 43793629
Alignment:
Q  180 ggggccaaaatcgcaaaattttgaaacttaaggggcgaaaagtggagtttagccta 235  Q
    |||||||||||||||| ||||| |||| || ||||||||||||| |||||||||||    
T  43793684 ggggccaaaatcgcaacattttaaaacatagggggcgaaaagtgcagtttagccta 43793629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 176 - 234
Target Start/End: Complemental strand, 15058877 - 15058819
Alignment:
Q  176 aataggggccaaaatcgcaaaattttgaaacttaaggggcgaaaagtggagtttagcct 234  Q
    |||||||||||||||||||| |||||||||| || ||||| ||||||| | ||||||||    
T  15058877 aataggggccaaaatcgcaacattttgaaacatagggggccaaaagtgcactttagcct 15058819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 176 - 234
Target Start/End: Complemental strand, 24626279 - 24626221
Alignment:
Q  176 aataggggccaaaatcgcaaaattttgaaacttaaggggcgaaaagtggagtttagcct 234  Q
    |||||||| ||||||||||| ||||| |||||||  |||||||||||| ||||||||||    
T  24626279 aataggggtcaaaatcgcaacattttaaaacttagagggcgaaaagtgcagtttagcct 24626221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 108 - 149
Target Start/End: Complemental strand, 48158729 - 48158688
Alignment:
Q  108 catatttcccttatgttagggggtcaaaagagcatatttccc 149  Q
    ||||||||||||||||||| ||||||||||| ||||||||||    
T  48158729 catatttcccttatgttagagggtcaaaagatcatatttccc 48158688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 89 - 146
Target Start/End: Complemental strand, 55265024 - 55264967
Alignment:
Q  89 aagataacgggtcaaaaaacatatttcccttatgttagggggtcaaaagagcatattt 146  Q
    ||||||| |||| ||||||||||||| ||| | ||||| |||||||||||||||||||    
T  55265024 aagataaagggtaaaaaaacatattttcctaaagttagagggtcaaaagagcatattt 55264967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 127 - 245
Target Start/End: Original strand, 25618786 - 25618912
Alignment:
Q  127 ggggtcaaaagagcatatttccc-------agggggtcacttttgccannnnnnnnaataggggc-caaaatcgcaaaattttgaaacttaaggggcgaa 218  Q
    |||||||||||||||||||||||       ||||||||||||||||||        ||||||||  |||||| |||| |||||||||||||  ||||| |    
T  25618786 ggggtcaaaagagcatatttccctaaacttagggggtcacttttgccatttttcttaatagggggtcaaaattgcaacattttgaaacttagagggcgca 25618885  T
Q  219 aagtggagtttagcctatattttatat 245  Q
    ||||| |||||||||| | ||||||||    
T  25618886 aagtgaagtttagccttttttttatat 25618912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 180 - 238
Target Start/End: Original strand, 8749051 - 8749109
Alignment:
Q  180 ggggccaaaatcgcaaaattttgaaacttaaggggcgaaaagtggagtttagcctatat 238  Q
    |||||||||||||||| |||   ||||||||||||  ||||||| ||||||||||||||    
T  8749051 ggggccaaaatcgcaacattggcaaacttaaggggtcaaaagtgtagtttagcctatat 8749109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 180 - 234
Target Start/End: Original strand, 25011985 - 25012039
Alignment:
Q  180 ggggccaaaatcgcaaaattttgaaacttaaggggcgaaaagtggagtttagcct 234  Q
    ||||||||||| |||| ||| |||||| || ||||||||||||| ||||||||||    
T  25011985 ggggccaaaattgcaacattatgaaacatagggggcgaaaagtgcagtttagcct 25012039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 180 - 233
Target Start/End: Original strand, 9397440 - 9397493
Alignment:
Q  180 ggggccaaaatcgcaaaattttgaaacttaaggggcgaaaagtggagtttagcc 233  Q
    |||||||||||| ||| ||||| ||||||| |||| |||||||| |||||||||    
T  9397440 ggggccaaaatcccaacattttaaaacttagggggtgaaaagtgcagtttagcc 9397493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 108 - 149
Target Start/End: Original strand, 16291885 - 16291926
Alignment:
Q  108 catatttcccttatgttagggggtcaaaagagcatatttccc 149  Q
    ||||||||||| | ||||| ||||||||||||||||||||||    
T  16291885 catatttccctaaagttagagggtcaaaagagcatatttccc 16291926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 72 - 149
Target Start/End: Original strand, 43336075 - 43336152
Alignment:
Q  72 aatcgcaactttttgttaagataacgggtcaaaaaacatatttcccttatgttagggggtcaaaagagcatatttccc 149  Q
    |||||||||||||||| ||||||| |||||||| | | ||||||| | | | |||  |||||||||| ||||||||||    
T  43336075 aatcgcaactttttgtaaagataaagggtcaaacatcttatttccataaagatagaaggtcaaaagaacatatttccc 43336152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 180 - 233
Target Start/End: Original strand, 45633687 - 45633740
Alignment:
Q  180 ggggccaaaatcgcaaaattttgaaacttaaggggcgaaaagtggagtttagcc 233  Q
    ||||| |||||||||| ||||| |||||||| |||||||||||| |||| ||||    
T  45633687 ggggctaaaatcgcaacattttaaaacttaaagggcgaaaagtgaagttaagcc 45633740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 185 - 229
Target Start/End: Original strand, 14857598 - 14857642
Alignment:
Q  185 caaaatcgcaaaattttgaaacttaaggggcgaaaagtggagttt 229  Q
    ||||||||||| ||||||||||| |||| |||||||||| |||||    
T  14857598 caaaatcgcaacattttgaaactaaaggagcgaaaagtgcagttt 14857642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 184 - 220
Target Start/End: Original strand, 15795570 - 15795606
Alignment:
Q  184 ccaaaatcgcaaaattttgaaacttaaggggcgaaaa 220  Q
    |||||||||||| ||||||||||||||| ||||||||    
T  15795570 ccaaaatcgcaatattttgaaacttaagaggcgaaaa 15795606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 111; Significance: 5e-56; HSPs: 66)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 111; E-Value: 5e-56
Query Start/End: Original strand, 18 - 230
Target Start/End: Original strand, 23428700 - 23428920
Alignment:
Q  18 cctttcagcccaaaattgctaagaagatgccatatgtcctagaaaaggggtcataatcgcaactttttgttaagataacgggtcaaaaaacatatttccc 117  Q
    ||||||| |||||||||||| |||||||||||  ||||| |||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||    
T  23428700 cctttcatcccaaaattgctcagaagatgccacgtgtcccagaaaaggggtcataatcgcaactttttgtaaagataaggggtcaaaaaacatatttccc 23428799  T
Q  118 ttatgttagggggtcaaaagagcatatttccc-------agggggtcacttttgccannnnnnnnaata-ggggccaaaatcgcaaaattttgaaactta 209  Q
    ||||||||||||||||||||||||||||||||       ||||||||||||||||||        |||| ||||||||||| | || |||||||||||||    
T  23428800 ttatgttagggggtcaaaagagcatatttccctaaacatagggggtcacttttgccattttttttaatagggggccaaaattgtaacattttgaaactta 23428899  T
Q  210 aggggcgaaaagtggagttta 230  Q
     |||||||||| || ||||||    
T  23428900 gggggcgaaaaatgaagttta 23428920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 18 - 235
Target Start/End: Original strand, 26628106 - 26628331
Alignment:
Q  18 cctttcagcccaaaattgctaagaagatgccatatgtcctagaaaaggggtcataatcgcaactttttgttaagataacgggtcaaaaaacatatttccc 117  Q
    ||||||| |||||||||||| |||||| ||||  ||||| | |||||||| ||||||||||||||||||| ||||||| |||||||||| ||||||||||    
T  26628106 cctttcatcccaaaattgctgagaagacgccacgtgtcccaaaaaaggggccataatcgcaactttttgtaaagataaggggtcaaaaagcatatttccc 26628205  T
Q  118 ttatgttagggggtcaaaagagcatatttccc-------agggggtcacttttgccannnnnnnnaata-ggggccaaaatcgcaaaattttgaaactta 209  Q
    |||||||||| |||||||||||||||||||||       ||||||||||||||||||        |||| |||||||||||||||| |||||||||||||    
T  26628206 ttatgttaggaggtcaaaagagcatatttccctaaacatagggggtcacttttgccattttttttaatagggggccaaaatcgcaacattttgaaactta 26628305  T
Q  210 aggggcgaaaagtggagtttagccta 235  Q
      ||||||||| || |||||||||||    
T  26628306 gagggcgaaaaatgaagtttagccta 26628331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 18 - 149
Target Start/End: Original strand, 28173810 - 28173941
Alignment:
Q  18 cctttcagcccaaaattgctaagaagatgccatatgtcctagaaaaggggtcataatcgcaactttttgttaagataacgggtcaaaaaacatatttccc 117  Q
    ||||||| ||||||||||||  ||||||||||  ||||| |||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||    
T  28173810 cctttcatcccaaaattgctcggaagatgccacgtgtcccagaaaaggggtcataatcgcaactttttgtaaagataaggggtcaaaaaacatatttccc 28173909  T
Q  118 ttatgttagggggtcaaaagagcatatttccc 149  Q
    ||||||||||||||||||||||||||||||||    
T  28173910 ttatgttagggggtcaaaagagcatatttccc 28173941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 21 - 239
Target Start/End: Original strand, 27852836 - 27853061
Alignment:
Q  21 ttcagcccaaaattgctaagaagatgccatatgtcctagaaaaggggtcataatcgcaactttttgttaagataacgggtcaaaaaacatatttccctta 120  Q
    ||||||||||||||| | |||||| ||||  ||||| | |||||||| ||||||||||||||||||| ||||||| |||||||||| |||||||||||||    
T  27852836 ttcagcccaaaattgttgagaagacgccacgtgtccca-aaaaggggccataatcgcaactttttgtaaagataaggggtcaaaaagcatatttccctta 27852934  T
Q  121 tgttagggggtcaaaagagcatatttccc-------agggggtcacttttgccannnnnnnnaata-ggggccaaaatcgcaaaattttgaaacttaagg 212  Q
    ||||||| |||||||||||||||||||||       ||||||||||||||||||        |||| ||||||||||| |||| |||||||||||||  |    
T  27852935 tgttaggaggtcaaaagagcatatttccctaaacatagggggtcacttttgccattttttttaatagggggccaaaattgcaacattttgaaacttagag 27853034  T
Q  213 ggcgaaaagtggagtttagcctatatt 239  Q
    ||||||||||| |||||||||||||||    
T  27853035 ggcgaaaagtgaagtttagcctatatt 27853061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 21 - 233
Target Start/End: Complemental strand, 13081114 - 13080894
Alignment:
Q  21 ttcagcccaaaattgctaagaagatgccatatgtcctagaaaaggggtcataatcgcaactttttgttaagataacgggtcaaaaaacatatttccctta 120  Q
    |||| |||||||||||| ||||||  ||| |||||| | |||||||| ||||||||||||||||||| ||||||| |||||||||| |||||||||||||    
T  13081114 ttcatcccaaaattgctgagaagactccacatgtcccaaaaaaggggccataatcgcaactttttgtaaagataaggggtcaaaaagcatatttccctta 13081015  T
Q  121 tgttagggggtcaaaagagcatatttccc-------agggggtcacttttgccannnnnnnnaataggg-gccaaaatcgcaaaattttgaaacttaagg 212  Q
    ||||| | |||||||||||||||||||||       ||||||||||||||||||        ||||||| ||||||||||||| |||||||||||||  |    
T  13081014 tgttatgaggtcaaaagagcatatttccctaaatatagggggtcacttttgccattttttttaatagggagccaaaatcgcaacattttgaaacttagag 13080915  T
Q  213 ggcgaaaagtggagtttagcc 233  Q
    ||||||||||| |||||||||    
T  13080914 ggcgaaaagtgaagtttagcc 13080894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 94; E-Value: 7e-46
Query Start/End: Original strand, 18 - 229
Target Start/End: Original strand, 25022744 - 25022960
Alignment:
Q  18 cctttcagcccaaaattgctaagaagatgccatatgtcctagaaaaggggtcataatcgcaactttttgttaagataacgggtcaaaaaacatatttccc 117  Q
    ||||||| |||||||||||| |||||||||||  ||||| |||||||||||||||||||||||||||||| ||||||| || ||||||||||||| ||||    
T  25022744 cctttcatcccaaaattgctcagaagatgccacgtgtcccagaaaaggggtcataatcgcaactttttgtaaagataagggttcaaaaaacatatatccc 25022843  T
Q  118 ttatgttagggggtcaaaagagcatatttccc-------agggggtcacttttgccannnnnnnnaataggggccaaaatcgcaaaattttgaaacttaa 210  Q
    |||||||| |||||||||||||||||||||||       ||||||||||||||||||        |  | |||||||||||| || |||||||||||||     
T  25022844 ttatgttatggggtcaaaagagcatatttccctaaacatagggggtcacttttgccatttttaata--aagggccaaaatcgtaacattttgaaacttag 25022941  T
Q  211 ggggcgaaaagtggagttt 229  Q
     ||||||||||||| ||||    
T  25022942 tgggcgaaaagtggtgttt 25022960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 94; E-Value: 7e-46
Query Start/End: Original strand, 18 - 233
Target Start/End: Original strand, 46673128 - 46673350
Alignment:
Q  18 cctttcagcccaaaattgctaagaagatgccatatgtcctagaaaaggggtcataatcgcaac-tttttgttaagataacgggtcaaaaaacatatttcc 116  Q
    ||||||| |||||||||||| |||||||||||  ||||||||||||||||||||||||||||| ||||||| ||||||| ||||| ||||||||||||||    
T  46673128 cctttcatcccaaaattgctcagaagatgccacgtgtcctagaaaaggggtcataatcgcaacttttttgtaaagataaggggtc-aaaaacatatttcc 46673226  T
Q  117 cttatgttagggggtcaaaagagcatatttccc-------agggggtcacttttgccannnnnnnnaataggggccaaaatcgcaaaattttgaaactta 209  Q
    |||||||||||| ||||||||||||||||||||       ||||| ||||||||||||        |   |||| ||||||||||| ||||  |||||||    
T  46673227 cttatgttagggagtcaaaagagcatatttccctaaacataggggatcacttttgccatttttttaatagggggtcaaaatcgcaacatttgaaaactta 46673326  T
Q  210 aggggcgaaaagtggagtttagcc 233  Q
    |||||||||||||||| |||||||    
T  46673327 aggggcgaaaagtggactttagcc 46673350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 94; E-Value: 7e-46
Query Start/End: Original strand, 18 - 234
Target Start/End: Original strand, 48907373 - 48907596
Alignment:
Q  18 cctttcagcccaaaattgctaagaagatgccatatgtcctagaaaaggggtcataatcgcaactttttgttaagataacgggtcaaaaaacatatttccc 117  Q
    ||||||| |||||||||||| |||||| ||||  ||||| | |||||||| ||||||||||||||||| | ||||||| |||||||||| ||||||||||    
T  48907373 cctttcatcccaaaattgctgagaagacgccacgtgtcccaaaaaaggggccataatcgcaactttttttaaagataaggggtcaaaaagcatatttccc 48907472  T
Q  118 ttatgttagggggtcaaaagagcatatttccc-------agggggtcacttttgccannnnnnnnaataggggccaaaatcgcaaaattttgaaacttaa 210  Q
    |||||||||| |||||||||||||||||||||       ||||||||||||||||||        |   |||||||||||||||| |||||||||||||     
T  48907473 ttatgttaggaggtcaaaagagcatatttccctaaacatagggggtcacttttgccatttttttaatagggggccaaaatcgcaacattttgaaacttag 48907572  T
Q  211 ggggcgaaaagtggagtttagcct 234  Q
     |||||||||||| ||||||||||    
T  48907573 agggcgaaaagtgaagtttagcct 48907596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 18 - 233
Target Start/End: Original strand, 3328894 - 3329117
Alignment:
Q  18 cctttcagcccaaaattgctaagaagatgccatatgtcctagaaaaggggtcataatcgcaactttttgttaagataacgggtcaaaaaacatatttccc 117  Q
    ||||||| || ||||||||| |||||| ||||  ||||| | |||||||| ||||||||||||||||||| ||||||| |||||||||  ||||||||||    
T  3328894 cctttcatccaaaaattgctgagaagacgccacgtgtcccaaaaaaggggccataatcgcaactttttgtaaagataaggggtcaaaaggcatatttccc 3328993  T
Q  118 ttatgttagggggtcaaaagagcatatttccc-------agggggtcacttttgccannnnnnnnaata-ggggccaaaatcgcaaaattttgaaactta 209  Q
    |||||||||| |||||||||||||||||||||       |||||||||||||| |||        |||| |||||||||||||||| |||||||||||||    
T  3328994 ttatgttaggaggtcaaaagagcatatttccctaaacttagggggtcactttttccattttttttaatagggggccaaaatcgcaacattttgaaactta 3329093  T
Q  210 aggggcgaaaagtggagtttagcc 233  Q
      |||||||||||| |||||||||    
T  3329094 gagggcgaaaagtgaagtttagcc 3329117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 18 - 234
Target Start/End: Complemental strand, 10743630 - 10743408
Alignment:
Q  18 cctttcagcccaaaattgctaagaagatgccatatgtcctagaaaaggggtcataatcgcaactttttgttaagataacgggtcaaaaaacatatttccc 117  Q
    ||||||| |||||||||||| | |||||||||  || || |||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||    
T  10743630 cctttcatcccaaaattgctcaaaagatgccacgtgacccagaaaaggggtcataatcgcaactttttgtaaagataaggggtcaaaaaacatatttccc 10743531  T
Q  118 ttatgttagggggtcaaaagagcatatttccc-------agggggtcacttttgccannnnnnnnaataggggccaaaatcgcaaaattttgaaacttaa 210  Q
    |||||||| ||||| |||||||||||||||||       |||| |||||||||| ||        |   |||||||||||||||| ||||| |||||||     
T  10743530 ttatgtta-ggggttaaaagagcatatttccctaaacatagggagtcacttttgtcatttttttaatagggggccaaaatcgcaacattttaaaacttag 10743432  T
Q  211 ggggcgaaaagtggagtttagcct 234  Q
    ||||||||||| ||||||||||||    
T  10743431 ggggcgaaaagaggagtttagcct 10743408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 21 - 236
Target Start/End: Complemental strand, 25179796 - 25179575
Alignment:
Q  21 ttcagcccaaaattgctaagaagatgccatatgtcctagaaaaggggtcataatcgcaactttttgttaagataacgggtcaaaaaacatatttccctta 120  Q
    |||| |||||||||||| |||||| ||| |  |||| | |||||||| ||||||||||||||||||| ||||||| ||||||||||||||||||| ||||    
T  25179796 ttcatcccaaaattgctgagaagacgccgt--gtcccaaaaaaggggccataatcgcaactttttgtaaagataaggggtcaaaaaacatatttctctta 25179699  T
Q  121 tgttagggggtcaaaagagcatatttccc-------agggggtcacttttgccannnnnnnnaata-ggggccaaaatcgcaaaattttgaaacttaagg 212  Q
     |||||| |||||||||||||||||||||       |||||||||||||||| |        |||| |||||||||||||||| ||||| |||||||  |    
T  25179698 cgttaggaggtcaaaagagcatatttccctaaacatagggggtcacttttgctattttttttaatagggggccaaaatcgcaacattttaaaacttagag 25179599  T
Q  213 ggcgaaaagtggagtttagcctat 236  Q
    ||||||||||| ||||||||||||    
T  25179598 ggcgaaaagtgaagtttagcctat 25179575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 29 - 149
Target Start/End: Original strand, 30155237 - 30155357
Alignment:
Q  29 aaaattgctaagaagatgccatatgtcctagaaaaggggtcataatcgcaactttttgttaagataacgggtcaaaaaacatatttcccttatgttaggg 128  Q
    |||||||||  ||||| ||||| ||||| | |||||||| ||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||     
T  30155237 aaaattgctgcgaagacgccatgtgtcccaaaaaaggggccataatcgcaactttttgtaaagataaggggtcaaaaaacatatttcccttatgttagga 30155336  T
Q  129 ggtcaaaagagcatatttccc 149  Q
    |||||||||||||||||||||    
T  30155337 ggtcaaaagagcatatttccc 30155357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 21 - 234
Target Start/End: Complemental strand, 8542830 - 8542609
Alignment:
Q  21 ttcagcccaaaattgctaagaagatgccatatgtcctagaaaaggggtcataatcgcaactttttgttaagataacgggtcaaaaaacatatttccctta 120  Q
    |||| |||||||||||| |||||| ||||  ||||  | |||||||| |||||| |||||||||||| ||||||| |||||||||| |||||||||||||    
T  8542830 ttcatcccaaaattgctgagaagacgccacgtgtcacaaaaaaggggccataattgcaactttttgtaaagataaggggtcaaaaagcatatttccctta 8542731  T
Q  121 tgttagggggtcaaaagagcatatttccc-------agggggtcacttttgccannnnnnnnaata-ggggccaaaatcgcaaaattttgaaacttaagg 212  Q
    ||||||| |||||||||||||||||||||       ||||||||||||||||||        |||| |||| |||||| |||| |||||||||||||  |    
T  8542730 tgttaggaggtcaaaagagcatatttccctaaacatagggggtcacttttgccattttttttaatagggggtcaaaattgcaacattttgaaacttagag 8542631  T
Q  213 ggcgaaaagtggagtttagcct 234  Q
    | ||||||||| ||||||||||    
T  8542630 gacgaaaagtgaagtttagcct 8542609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 18 - 235
Target Start/End: Complemental strand, 4522177 - 4521952
Alignment:
Q  18 cctttcagcccaaaattgctaagaagatgccatatgtcctagaaaaggggtcataatcgcaactttttgttaagataacgggtcaaaaaacatatttccc 117  Q
    ||||||| || ||||||||| |||||| ||||  ||||| | ||||||||  |||||||||||||||||| ||||||| |||||||||| ||||||||||    
T  4522177 cctttcatcctaaaattgctgagaagacgccacgtgtcccaaaaaaggggcaataatcgcaactttttgtaaagataaggggtcaaaaagcatatttccc 4522078  T
Q  118 ttatgttagggggtcaaaagagcatatttccc-------agggggtcacttttgccannnnnnnnaata-ggggccaaaatcgcaaaattttgaaactta 209  Q
    |||||||| | |||||||||||||||||||||       | |||||||||||||| |        |||| |||||||||||||||| ||||| |||||||    
T  4522077 ttatgttaagaggtcaaaagagcatatttccctaaacatatggggtcacttttgctactttttttaatagggggccaaaatcgcaacattttaaaactta 4521978  T
Q  210 aggggcgaaaagtggagtttagccta 235  Q
      |||||||||||| |||||| ||||    
T  4521977 tagggcgaaaagtgaagtttaaccta 4521952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 20 - 234
Target Start/End: Complemental strand, 3781099 - 3780882
Alignment:
Q  20 tttcagcccaaaattgctaagaagatgccatatgtcctagaaaaggggtcataatcgcaactttttgttaagataacgggtcaaaaaacatatttccctt 119  Q
    ||||| || ||||||||| ||||||  |||  ||||| | ||||||||||||| |||||||||||||| ||||||| |||||||||| ||||||||||||    
T  3781099 tttcatcctaaaattgctgagaagacaccacgtgtcccaaaaaaggggtcatattcgcaactttttgtaaagataaagggtcaaaaagcatatttccctt 3781000  T
Q  120 atgttagggggtcaaaagagcatatttcc-----cagggggtcacttttgccannnnnnnnaataggggccaaaatcgcaaaattttgaaacttaagggg 214  Q
    |||||| ||||||||||||||||||||||     || ||||||||||||||||        |||||||| ||||||||||| ||||||||||||| || |    
T  3780999 atgtta-ggggtcaaaagagcatatttccctaaacatggggtcacttttgcca-tttttttaataggggtcaaaatcgcaacattttgaaacttagggag 3780902  T
Q  215 cgaaaagtggagtttagcct 234  Q
    | |||| || | ||||||||    
T  3780901 caaaaaatgcattttagcct 3780882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 21 - 233
Target Start/End: Original strand, 8339024 - 8339244
Alignment:
Q  21 ttcagcccaaaattgctaagaagatgccatatgtcctagaaaaggggtcataatcgcaactttttgttaagataacgggtcaaaaaacatatttccctta 120  Q
    |||| |||||||||||| |||||| ||||  ||||| | ||||| || ||||||||||||||||||| ||||||| |||||||||| ||||||||  |||    
T  8339024 ttcatcccaaaattgctgagaagacgccacgtgtcccaaaaaagaggccataatcgcaactttttgtaaagataaggggtcaaaaagcatatttctatta 8339123  T
Q  121 tgttagggggtcaaaagagcatatttccc-------agggggtcacttttgccannnnnnnnaata-ggggccaaaatcgcaaaattttgaaacttaagg 212  Q
    ||||||| |||||||| ||||||||||||       | ||||||||||||||||        |||| ||||||||||| |||| |||||||||||||  |    
T  8339124 tgttaggaggtcaaaaaagcatatttccctaaacataaggggtcacttttgccattttttttaatagggggccaaaattgcaacattttgaaacttagag 8339223  T
Q  213 ggcgaaaagtggagtttagcc 233  Q
    ||||||||||| |||||||||    
T  8339224 ggcgaaaagtgaagtttagcc 8339244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 18 - 149
Target Start/End: Original strand, 28154963 - 28155094
Alignment:
Q  18 cctttcagcccaaaattgctaagaagatgccatatgtcctagaaaaggggtcataatcgcaactttttgttaagataacgggtcaaaaaacatatttccc 117  Q
    ||||||| || ||||||||| |||||| ||||  ||||| | |||| ||| ||||||||||||||||||| |||||||  ||||||||| ||||||||||    
T  28154963 cctttcatccaaaaattgctgagaagacgccacgtgtcccaaaaaaagggccataatcgcaactttttgtaaagataagaggtcaaaaagcatatttccc 28155062  T
Q  118 ttatgttagggggtcaaaagagcatatttccc 149  Q
    |||||||||| |||||||||||||||||||||    
T  28155063 ttatgttaggaggtcaaaagagcatatttccc 28155094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 20 - 149
Target Start/End: Complemental strand, 48860924 - 48860794
Alignment:
Q  20 tttcagcccaaaattgctaagaagatgccatatgtcct-agaaaaggggtcataatcgcaactttttgttaagataacgggtcaaaaaacatatttccct 118  Q
    ||||| ||||||||| || |||||||||||  || ||  ||||||||| |||||||||||||||||||| ||||||| ||||||||||||||||||||||    
T  48860924 tttcatcccaaaattactcagaagatgccacgtgcccccagaaaagggatcataatcgcaactttttgtaaagataaggggtcaaaaaacatatttccct 48860825  T
Q  119 tatgttagggggtcaaaagagcatatttccc 149  Q
    ||||||||  |||||||| ||||||||||||    
T  48860824 tatgttagaaggtcaaaatagcatatttccc 48860794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 18 - 118
Target Start/End: Complemental strand, 6927693 - 6927593
Alignment:
Q  18 cctttcagcccaaaattgctaagaagatgccatatgtcctagaaaaggggtcataatcgcaactttttgttaagataacgggtcaaaaaacatatttccc 117  Q
    ||||||| |||||||||||| |||||||||||  ||||| | |||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||    
T  6927693 cctttcatcccaaaattgctcagaagatgccacgtgtcccaaaaaaggggtcataatcgcaactttttgtaaagataaggggtcaaaaaacatatttccc 6927594  T
Q  118 t 118  Q
    |    
T  6927593 t 6927593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 60 - 149
Target Start/End: Original strand, 26633482 - 26633570
Alignment:
Q  60 aaaaggggtcataatcgcaactttttgttaagataacgggtcaaaaaacatatttcccttatgttagggggtcaaaagagcatatttccc 149  Q
    |||||||| ||||||||||||||||||| ||||||| ||||||||||||||||||| ||||||||| |||||||||||||||||||||||    
T  26633482 aaaaggggccataatcgcaactttttgtaaagataaggggtcaaaaaacatatttctcttatgtta-ggggtcaaaagagcatatttccc 26633570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 27 - 235
Target Start/End: Original strand, 40836268 - 40836484
Alignment:
Q  27 ccaaaattgctaagaagatgccatatgtcctagaaaaggggtcataatcgcaactttttgtta-agataacgggtcaaaaaacatatttcccttatgtta 125  Q
    ||||||||||| |||||  ||||  ||||| | |||||||| ||||||||||||||||| | | | |||| ||||||||||||||||||||||||| |||    
T  40836268 ccaaaattgctgagaagccgccacgtgtcccaaaaaaggggccataatcgcaactttttttgagatataaggggtcaaaaaacatatttcccttatatta 40836367  T
Q  126 gggggtcaaaagagcatatttcc-----cagggggtcacttttgcca-nnnnnnnnaata-ggggccaaaatcgcaaaattttgaaacttaaggggcgaa 218  Q
    ||||||||||||| |||||||||     || ||||||||||||||||         |||| |||| ||||||||||| ||||| ||||||| ||||||||    
T  40836368 gggggtcaaaagaacatatttccctaaacatggggtcacttttgccatttttttttaatagggggtcaaaatcgcaacattttaaaacttagggggcgaa 40836467  T
Q  219 aagtggagtttagccta 235  Q
    || || |||||||||||    
T  40836468 aaatgcagtttagccta 40836484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 18 - 235
Target Start/End: Original strand, 22447821 - 22448050
Alignment:
Q  18 cctttcagcccaaaattgctaagaagatgccatatgtcctagaaaaggggtcataatcgcaactttttgttaagata----acgggtcaaaaaacatatt 113  Q
    ||||||| || |||||| || |||||| ||||  | ||| | |||||||| ||||||||||||||||||| ||||||    | |||||||||| ||||||    
T  22447821 cctttcatccaaaaatttctgagaagacgccacgtatccaaaaaaaggggccataatcgcaactttttgtaaagatatataaggggtcaaaaagcatatt 22447920  T
Q  114 tcccttatgttagggggtcaaaagagcatatttccc-------agggggtcacttttgccannnnnnnnaata-ggggccaaaatcgcaaaattttgaaa 205  Q
    |||||||||||||| |||||||||||||||||||||       ||| ||||||||||||||        |||| ||||||||||| |||| ||||| |||    
T  22447921 tcccttatgttaggaggtcaaaagagcatatttccctaaacataggaggtcacttttgccatattttttaatagggggccaaaattgcaacattttaaaa 22448020  T
Q  206 cttaaggggcgaaaagtggagtttagccta 235  Q
    ||||  |||||||||||| |||||| ||||    
T  22448021 cttagagggcgaaaagtgcagtttaaccta 22448050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 28 - 149
Target Start/End: Original strand, 34878620 - 34878741
Alignment:
Q  28 caaaattgctaagaagatgccatatgtcctagaaaaggggtcataatcgcaactttttgttaagataacgggtcaaaaaacatatttcccttatgttagg 127  Q
    |||||||||| |||||| ||||  ||||| | |||||| | |||||| | |||||||||| ||||||| || ||||||| |||||||||||||| |||||    
T  34878620 caaaattgctgagaagacgccacgtgtcccaaaaaaggtgccataattgaaactttttgtaaagataagggatcaaaaagcatatttcccttatattagg 34878719  T
Q  128 gggtcaaaagagcatatttccc 149  Q
    ||||||||||||||||||||||    
T  34878720 gggtcaaaagagcatatttccc 34878741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 18 - 146
Target Start/End: Original strand, 22500676 - 22500804
Alignment:
Q  18 cctttcagcccaaaattgctaagaagatgccatatgtcctagaaaaggggtcataatcgcaactttttgttaagataacgggtcaaaaaacatatttccc 117  Q
    ||||||| || |||||| || |||||| ||||  ||||| | |||||||  ||||||||||||||||||| || |||| || ||||||| ||||||||||    
T  22500676 cctttcatccaaaaatttctgagaagacgccacgtgtccaaaaaaagggaccataatcgcaactttttgtaaatataagggatcaaaaagcatatttccc 22500775  T
Q  118 ttatgttagggggtcaaaagagcatattt 146  Q
    |||||||||| ||||||||||||||||||    
T  22500776 ttatgttaggaggtcaaaagagcatattt 22500804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 26 - 149
Target Start/End: Original strand, 26177045 - 26177168
Alignment:
Q  26 cccaaaattgctaagaagatgccatatgtcctagaaaaggggtcataatcgcaactttttgttaagataacgggtcaaaaaacatatttcccttatgtta 125  Q
    |||||||||||| |||||| |||| | |||| | ||||| || ||||||||||||||||||| ||||||| | | |||||| |||||||||| |||||||    
T  26177045 cccaaaattgctgagaagaagccacaagtcccaaaaaagaggccataatcgcaactttttgtaaagataatgagccaaaaagcatatttcccctatgtta 26177144  T
Q  126 gggggtcaaaagagcatatttccc 149  Q
    | ||||||||| ||||||||||||    
T  26177145 gagggtcaaaatagcatatttccc 26177168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 28 - 149
Target Start/End: Original strand, 26126997 - 26127118
Alignment:
Q  28 caaaattgctaagaagatgccatatgtcctagaaaaggggtcataatcgcaactttttgttaagataacgggtcaaaaaacatatttcccttatgttagg 127  Q
    |||||||||| |||||| |||| | |||| | ||||| || ||||||||||||||||||| ||||||| ||| |||||| |||||||||| ||||||||     
T  26126997 caaaattgctgagaagacgccacaagtccaaaaaaagaggccataatcgcaactttttgtaaagataaggggccaaaaagcatatttcccctatgttaga 26127096  T
Q  128 gggtcaaaagagcatatttccc 149  Q
    ||||||||| | ||||||||||    
T  26127097 gggtcaaaataacatatttccc 26127118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 26 - 149
Target Start/End: Complemental strand, 22416549 - 22416425
Alignment:
Q  26 cccaaaattgctaagaagatgccatatgtcctagaaaaggggtcataatcgcaactttttgttaagataacgggtcaaaa-aacatatttcccttatgtt 124  Q
    |||||||||| | |||||| ||||  ||||| | | ||||||||||||| |||||||||||| ||||||| ||||||||| | ||||||| |||||||||    
T  22416549 cccaaaattgttgagaagacgccacgtgtcccaaataaggggtcataattgcaactttttgtaaagataatgggtcaaaagagcatatttaccttatgtt 22416450  T
Q  125 agggggtcaaaagagcatatttccc 149  Q
    ||  |||||||||||||||| ||||    
T  22416449 agaaggtcaaaagagcatatatccc 22416425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 20 - 230
Target Start/End: Complemental strand, 20001930 - 20001714
Alignment:
Q  20 tttcagcccaaaattgctaagaagatgccatatgtcctagaaaaggggtcataatcgcaactttttgttaagataacgggtcaaaaaacatatttccctt 119  Q
    ||||| |||||||||| | |||||| ||||  ||| | | || ||||| |||| |||||||||||||  || |||| |||  | | | ||||||||||||    
T  20001930 tttcatcccaaaattgttgagaagacgccacgtgttccaaaacaggggccatagtcgcaactttttgagaatataaggggcaagagatcatatttccctt 20001831  T
Q  120 atgttagggggtcaaaagagcatatttccc-------agggggtcacttttgccannnnnnnnaataggggccaaaatcgcaaaattttgaaacttaagg 212  Q
    ||||||||||||||||||||||||||||||       ||||||||||||||| ||        |||||||| ||||||||||| ||||||||||||| ||    
T  20001830 atgttagggggtcaaaagagcatatttccctaaacatagggggtcacttttg-cactttttttaataggggtcaaaatcgcaacattttgaaacttaggg 20001732  T
Q  213 ggcgaaaagtggagttta 230  Q
    ||  ||||||| ||||||    
T  20001731 ggttaaaagtgcagttta 20001714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 17 - 150
Target Start/End: Original strand, 35201075 - 35201207
Alignment:
Q  17 acctttcagcccaaaattgctaagaagatgccatatgtcctagaaaaggggtcataatcgcaactttttgttaagataacgggtcaaaa-aacatatttc 115  Q
    |||||||| |||||||||| | ||||||||||| |||||||| || ||| | ||| |||| |||||||||  ||||||| ||||||||| | ||||||||    
T  35201075 acctttcatcccaaaattgttgagaagatgccacatgtcctaaaacaggagccatgatcgtaactttttgagaagataaggggtcaaaatatcatatttc 35201174  T
Q  116 ccttatgttagggggtcaaaagagcatatttccca 150  Q
    | ||||||||  ||||||||||||||| |||||||    
T  35201175 ctttatgtta--gggtcaaaagagcatgtttccca 35201207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 26 - 235
Target Start/End: Complemental strand, 36311366 - 36311150
Alignment:
Q  26 cccaaaattgctaagaagatgccatatgtcctagaaaaggggtcataatcgcaactttttgttaagataacgggtcaaaaaa-catatttcccttatgtt 124  Q
    |||||||||| | |||||| ||||  ||||| | || | ||| | ||||||||||| ||||  ||||||| |||| ||||   |||||||||||||||||    
T  36311366 cccaaaattgttgagaagaagccacgtgtcccaaaatatgggccgtaatcgcaactatttgagaagataaggggttaaaatgtcatatttcccttatgtt 36311267  T
Q  125 agggggtcaaaagagcatatttccc-----agggggtcacttttgccannnnnnnn-aataggggccaaaatcgcaaaattttgaaacttaaggggcgaa 218  Q
    | ||||||||||||| |||||| ||     | ||||||||||||||||         |||||||||||||||||||| ||||| ||||||| ||| ||||    
T  36311266 atggggtcaaaagagtatattttcctaaatatggggtcacttttgccatttttttttaataggggccaaaatcgcaacattttaaaacttaggggacgaa 36311167  T
Q  219 aagtggagtttagccta 235  Q
    ||||| |||||||||||    
T  36311166 aagtgcagtttagccta 36311150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 20 - 118
Target Start/End: Complemental strand, 3821103 - 3821004
Alignment:
Q  20 tttcagcccaaaattgctaagaagatgccatatgtcctagaaaaggggtcataatcgcaactttttgttaagataacgggtcaaaa-aacatatttccct 118  Q
    ||||| || ||||||||| ||||||  ||| |||||| | |||||||||||||||||||||||||||| ||||||| ||||||||| | |||||||||||    
T  3821103 tttcatcctaaaattgctgagaagacaccacatgtcccaaaaaaggggtcataatcgcaactttttgtaaagataaagggtcaaaagagcatatttccct 3821004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 29 - 235
Target Start/End: Original strand, 33279677 - 33279890
Alignment:
Q  29 aaaattgctaagaagatgccatatgtcctagaaaaggggtcataatcgcaactttttgttaagataacgggtcaaaaaa-catatttcccttatgttagg 127  Q
    ||||||||| |||||| ||||  ||||  | |||| |||||||||||| ||||||| || || |||| || |||||| | ||||||||||||||||||||    
T  33279677 aaaattgctgagaagacgccacgtgtctcaaaaaaagggtcataatcgtaactttt-gtaaatataagggatcaaaagagcatatttcccttatgttagg 33279775  T
Q  128 gggtcaaaagagcatatttccc------agggggtcacttttgccannnnnnnnaata-ggggccaaaatcgcaaaattttgaaacttaaggggcgaaaa 220  Q
    ||||||||||||||||||| ||      || ||| |||||||||||        |||| |||| ||||||||||| ||||| ||||||| ||||||||||    
T  33279776 gggtcaaaagagcatattttcctaaacaagagggccacttttgccattttttttaatagggggtcaaaatcgcaacattttaaaacttagggggcgaaaa 33279875  T
Q  221 gtggagtttagccta 235  Q
    ||  ||| |||||||    
T  33279876 gttcagtctagccta 33279890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 65 - 149
Target Start/End: Original strand, 9496344 - 9496429
Alignment:
Q  65 gggtcataatcgcaacttttt-gttaagataacgggtcaaaaaacatatttcccttatgttagggggtcaaaagagcatatttccc 149  Q
    |||||||  |||||||||||| || ||||||| ||| |||||| ||||||||| ||||||||| ||||||||||||||||||||||    
T  9496344 gggtcatcctcgcaacttttttgtaaagataaggggacaaaaagcatatttcctttatgttagagggtcaaaagagcatatttccc 9496429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 70 - 240
Target Start/End: Complemental strand, 25336527 - 25336351
Alignment:
Q  70 ataatcgcaactttttgttaagataacgggtcaaaaaa-catatttcccttatgttagggggtcaaaagagcatatttccc-----agggggtcactttt 163  Q
    |||||||||||||||||  ||| |||  ||||||||   |||||||||||||||||||||||||||||||||||| |||||     |  || ||||||||    
T  25336527 ataatcgcaactttttgagaagttaaaaggtcaaaaggtcatatttcccttatgttagggggtcaaaagagcataattccctaaatataggttcactttt 25336428  T
Q  164 gccannnnnnnnaataggggccaaaatcgcaaaattttgaaacttaaggggcgaaaagtggagtttagcctatattt 240  Q
    | ||        |  || ||||||||| |||| ||||||||| ||||||||||||||||| ||||||||| ||||||    
T  25336427 gtcatttttttaataagaggccaaaattgcaacattttgaaatttaaggggcgaaaagtgcagtttagccaatattt 25336351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 26 - 149
Target Start/End: Complemental strand, 32315134 - 32315011
Alignment:
Q  26 cccaaaattgctaagaagatgccatatgtcctagaaaaggggtcataatcgcaactttttgttaagataacgggtcaaaaaaca-tatttcccttatgtt 124  Q
    |||||||||| | |||||| |||| |||||||| || | ||| |||| ||||| |||||||   |||||| ||||||||| | | ||||||||| |||||    
T  32315134 cccaaaattgttgagaagacgccacatgtcctaaaacatgggccata-tcgcagctttttgaggagataaggggtcaaaatataatatttccctcatgtt 32315036  T
Q  125 agggggtcaaaagagcatatttccc 149  Q
    |||||||||||||| ||||||||||    
T  32315035 agggggtcaaaagaacatatttccc 32315011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 18 - 118
Target Start/End: Original strand, 32960724 - 32960823
Alignment:
Q  18 cctttcagcccaaaattgctaagaagatgccatatgtcctagaaaaggggtcataatcgcaactttttgttaagataacgggtcaaaaaacatatttccc 117  Q
    ||||||| ||||||||| || |||||| ||||  ||||| | |||| ||  ||||||||||||||||||| ||||||| |||||||||| ||||||||||    
T  32960724 cctttcatcccaaaattactgagaagacgccacgtgtcccaaaaaaaggc-cataatcgcaactttttgtaaagataaggggtcaaaaagcatatttccc 32960822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 29 - 142
Target Start/End: Original strand, 31039069 - 31039182
Alignment:
Q  29 aaaattgctaagaagatgccatatgtcctagaaaaggggtcataatcgcaactttttgttaagataacgggtca-aaaaacatatttcccttatgttagg 127  Q
    ||||||||| |||||| |||| |||| ||| ||||||||  ||||||||||||||||   ||||||| ||||||  | | |||||||||| ||||||| |    
T  31039069 aaaattgctgagaagacgccacatgttctaaaaaaggggctataatcgcaactttttaagaagataaagggtcattagatcatatttcccatatgtta-g 31039167  T
Q  128 gggtcaaaagagcat 142  Q
    |||||||||||||||    
T  31039168 gggtcaaaagagcat 31039182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 176 - 245
Target Start/End: Complemental strand, 32960702 - 32960633
Alignment:
Q  176 aataggggccaaaatcgcaaaattttgaaacttaaggggcgaaaagtggagtttagcctatattttatat 245  Q
    ||||||||||||||| |||| |||||||||| || |||||||||| || ||||||||||| | |||||||    
T  32960702 aataggggccaaaattgcaacattttgaaacatagggggcgaaaaatgcagtttagcctaaaatttatat 32960633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 28 - 146
Target Start/End: Complemental strand, 1743462 - 1743344
Alignment:
Q  28 caaaattgctaagaagatgccatatgtcctagaaaaggggtcataatcgcaactttttgttaagataacgggtcaaaaaa-catatttcccttatgttag 126  Q
    |||||||||| |||||| |||| |||||| | || |  || | | ||||||||||||||  ||||||| ||||||||| | || |||||| |||||||||    
T  1743462 caaaattgctgagaagacgccacatgtcccaaaacaatggcccttatcgcaactttttgagaagataaggggtcaaaagatcacatttcc-ttatgttag 1743364  T
Q  127 ggggtcaaaagagcatattt 146  Q
    ||||||||||||| ||||||    
T  1743363 ggggtcaaaagagtatattt 1743344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 180 - 235
Target Start/End: Complemental strand, 22447793 - 22447738
Alignment:
Q  180 ggggccaaaatcgcaaaattttgaaacttaaggggcgaaaagtggagtttagccta 235  Q
    ||||||||||| |||| |||||||||| || ||||||||||||| |||||||||||    
T  22447793 ggggccaaaattgcaacattttgaaacatagggggcgaaaagtgcagtttagccta 22447738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 179 - 238
Target Start/End: Original strand, 25179825 - 25179884
Alignment:
Q  179 aggggccaaaatcgcaaaattttgaaacttaaggggcgaaaagtggagtttagcctatat 238  Q
    ||||||||| ||||||| |||||||||| || ||||||||||||| | ||||||||||||    
T  25179825 aggggccaatatcgcaacattttgaaacatagggggcgaaaagtgcactttagcctatat 25179884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 180 - 235
Target Start/End: Complemental strand, 26628078 - 26628023
Alignment:
Q  180 ggggccaaaatcgcaaaattttgaaacttaaggggcgaaaagtggagtttagccta 235  Q
    ||||||||||| |||| |||||||||| || ||||||||||||| |||||||||||    
T  26628078 ggggccaaaattgcaacattttgaaacatagggggcgaaaagtgtagtttagccta 26628023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 180 - 235
Target Start/End: Complemental strand, 34878582 - 34878527
Alignment:
Q  180 ggggccaaaatcgcaaaattttgaaacttaaggggcgaaaagtggagtttagccta 235  Q
    |||||||||||||||| |||||||||| || ||||||| ||||| |||||||||||    
T  34878582 ggggccaaaatcgcaacattttgaaacatagggggcgagaagtgcagtttagccta 34878527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 28 - 87
Target Start/End: Complemental strand, 43668641 - 43668582
Alignment:
Q  28 caaaattgctaagaagatgccatatgtcctagaaaaggggtcataatcgcaactttttgt 87  Q
    |||||||||| |||||| |||| |||||| | || |||||||||||||||||||||||||    
T  43668641 caaaattgctgagaagacgccacatgtcccaaaacaggggtcataatcgcaactttttgt 43668582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 180 - 234
Target Start/End: Original strand, 20001959 - 20002012
Alignment:
Q  180 ggggccaaaatcgcaaaattttgaaacttaaggggcgaaaagtggagtttagcct 234  Q
    |||||||||||||||| |||||||||||| ||||| |||||||| ||||||||||    
T  20001959 ggggccaaaatcgcaacattttgaaactt-aggggagaaaagtgcagtttagcct 20002012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 180 - 241
Target Start/End: Complemental strand, 3328866 - 3328805
Alignment:
Q  180 ggggccaaaatcgcaaaattttgaaacttaaggggcgaaaagtggagtttagcctatatttt 241  Q
    ||||||||||| | || |||||||||| || ||||||||||||| |||||||||| ||||||    
T  3328866 ggggccaaaattgtaacattttgaaacatagggggcgaaaagtgcagtttagcctttatttt 3328805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 69 - 149
Target Start/End: Complemental strand, 4776023 - 4775942
Alignment:
Q  69 cataatcgcaactttttgttaagataacgggtcaaaaaa-catatttcccttatgttagggggtcaaaagagcatatttccc 149  Q
    |||||||||||||||||   ||||||| || |||||  | |||||||||| ||||| |||||||||||| ||||||||||||    
T  4776023 cataatcgcaactttttaagaagataagggatcaaaggatcatatttcccgtatgtgagggggtcaaaatagcatatttccc 4775942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 106 - 235
Target Start/End: Original strand, 18388869 - 18389005
Alignment:
Q  106 aacatatttcccttatgttagggggtcaaaagagcatatttccc------agggggtcacttttgccannnnnnnnaatagggg-ccaaaatcgcaaaat 198  Q
    |||||||||  |||||| ||||||||||||||||||||||||||       |||||||||||||| ||        |||||||| |||||||| ||| ||    
T  18388869 aacatatttatcttatggtagggggtcaaaagagcatatttcccttaacatgggggtcacttttgtcattttttttaataggggaccaaaatcacaatat 18388968  T
Q  199 tttgaaacttaaggggcgaaaagtggagtttagccta 235  Q
    ||| |||||||||||| |||| ||| |||||| ||||    
T  18388969 tttaaaacttaaggggtgaaaggtgcagtttaaccta 18389005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 180 - 237
Target Start/End: Complemental strand, 22500649 - 22500592
Alignment:
Q  180 ggggccaaaatcgcaaaattttgaaacttaaggggcgaaaagtggagtttagcctata 237  Q
    ||||||||||| |||| |||||||||| || ||| ||||||||| |||||||||||||    
T  22500649 ggggccaaaattgcaatattttgaaacataggggccgaaaagtgcagtttagcctata 22500592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 180 - 233
Target Start/End: Complemental strand, 28154935 - 28154882
Alignment:
Q  180 ggggccaaaatcgcaaaattttgaaacttaaggggcgaaaagtggagtttagcc 233  Q
    ||||||||||| |||| |||||||||| || ||||||||||||| |||||||||    
T  28154935 ggggccaaaattgcaacattttgaaacatagggggcgaaaagtgtagtttagcc 28154882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 150 - 243
Target Start/End: Original strand, 32960830 - 32960920
Alignment:
Q  150 agggggtcacttttgccannnnnnnnaatagggg-ccaaaatcgcaaaattttgaaacttaaggggcgaaaagtggagtttagcctatattttat 243  Q
    ||||||||||||||||||        |||||||| |||||||||||| ||||||||||||    ||||||||||| ||||||||||| |||||||    
T  32960830 agggggtcacttttgccattttttttaataggggaccaaaatcgcaacattttgaaactt----ggcgaaaagtgaagtttagcctaaattttat 32960920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 176 - 235
Target Start/End: Original strand, 1743495 - 1743555
Alignment:
Q  176 aatagggg-ccaaaatcgcaaaattttgaaacttaaggggcgaaaagtggagtttagccta 235  Q
    |||||||| |||||||||||| ||||| ||||||| || |||||||||| |||||||||||    
T  1743495 aataggggaccaaaatcgcaacattttaaaacttagggagcgaaaagtgcagtttagccta 1743555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 108 - 148
Target Start/End: Original strand, 46387745 - 46387785
Alignment:
Q  108 catatttcccttatgttagggggtcaaaagagcatatttcc 148  Q
    |||||||||||||||||||||| |||||||||||| |||||    
T  46387745 catatttcccttatgttaggggatcaaaagagcatgtttcc 46387785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 180 - 235
Target Start/End: Complemental strand, 28173782 - 28173727
Alignment:
Q  180 ggggccaaaatcgcaaaattttgaaacttaaggggcgaaaagtggagtttagccta 235  Q
    |||||||||||||||| ||| |||||| || ||||||||||||| | |||||||||    
T  28173782 ggggccaaaatcgcaacattatgaaacatagggggcgaaaagtgcactttagccta 28173727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 176 - 231
Target Start/End: Original strand, 32315164 - 32315219
Alignment:
Q  176 aataggggccaaaatcgcaaaattttgaaacttaaggggcgaaaagtggagtttag 231  Q
    ||||||| | |||||||||| ||||| ||||||||||| ||||||||| |||||||    
T  32315164 aatagggacgaaaatcgcaacattttaaaacttaagggacgaaaagtgcagtttag 32315219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 180 - 234
Target Start/End: Complemental strand, 1743308 - 1743254
Alignment:
Q  180 ggggccaaaatcgcaaaattttgaaacttaaggggcgaaaagtggagtttagcct 234  Q
    ||||| ||||||| || ||||||||||||| || |||||||||| ||||||||||    
T  1743308 ggggctaaaatcgaaacattttgaaacttagggtgcgaaaagtgcagtttagcct 1743254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 179 - 233
Target Start/End: Complemental strand, 20626805 - 20626751
Alignment:
Q  179 aggggccaaaatcgcaaaattttgaaacttaaggggcgaaaagtggagtttagcc 233  Q
    |||||||||||||| || ||||||||||||| ||| ||||||||  |||||||||    
T  20626805 aggggccaaaatcgtaacattttgaaacttaggggacgaaaagtacagtttagcc 20626751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 180 - 234
Target Start/End: Complemental strand, 26633413 - 26633360
Alignment:
Q  180 ggggccaaaatcgcaaaattttgaaacttaaggggcgaaaagtggagtttagcct 234  Q
    |||| ||||||||||| ||||| ||||||| ||||||||||||| ||||||||||    
T  26633413 ggggtcaaaatcgcaacattttaaaactta-ggggcgaaaagtgcagtttagcct 26633360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 180 - 233
Target Start/End: Complemental strand, 8338993 - 8338940
Alignment:
Q  180 ggggccaaaatcgcaaaattttgaaacttaaggggcgaaaagtggagtttagcc 233  Q
    |||| ||||||||||| |||||||||| || ||||||||||||| | |||||||    
T  8338993 ggggtcaaaatcgcaacattttgaaacatagggggcgaaaagtgcactttagcc 8338940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 89 - 149
Target Start/End: Original strand, 34296531 - 34296592
Alignment:
Q  89 aagataacgggtcaaaaaa-catatttcccttatgttagggggtcaaaagagcatatttccc 149  Q
    ||||||| ||||||||| | ||||||||| | | ||||| ||||||||||||||||||||||    
T  34296531 aagataaagggtcaaaagagcatatttccataaagttagagggtcaaaagagcatatttccc 34296592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 108 - 149
Target Start/End: Original strand, 49657952 - 49657992
Alignment:
Q  108 catatttcccttatgttagggggtcaaaagagcatatttccc 149  Q
    ||||||| |||||||||||||| |||||||||||||||||||    
T  49657952 catattttccttatgttagggg-tcaaaagagcatatttccc 49657992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 180 - 236
Target Start/End: Complemental strand, 19984902 - 19984846
Alignment:
Q  180 ggggccaaaatcgcaaaattttgaaacttaaggggcgaaaagtggagtttagcctat 236  Q
    ||||||||||| ||||  |||||||||||| |||| |||||||| | ||||||||||    
T  19984902 ggggccaaaattgcaagtttttgaaacttagggggggaaaagtgcactttagcctat 19984846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 179 - 235
Target Start/End: Original strand, 19986119 - 19986175
Alignment:
Q  179 aggggccaaaatcgcaaaattttgaaacttaaggggcgaaaagtggagtttagccta 235  Q
    |||||||||||| ||||  |||||||||||||| || |||||||| | |||||||||    
T  19986119 aggggccaaaattgcaagtttttgaaacttaagaggggaaaagtgcactttagccta 19986175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 180 - 236
Target Start/End: Complemental strand, 25022717 - 25022661
Alignment:
Q  180 ggggccaaaatcgcaaaattttgaaacttaaggggcgaaaagtggagtttagcctat 236  Q
    |||||||||||||||| ||| |||||| || ||||| ||||||| | ||||||||||    
T  25022717 ggggccaaaatcgcaatattatgaaacatatggggcaaaaagtgcactttagcctat 25022661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 186 - 234
Target Start/End: Complemental strand, 33279633 - 33279585
Alignment:
Q  186 aaaatcgcaaaattttgaaacttaaggggcgaaaagtggagtttagcct 234  Q
    |||||||||| ||||  |||||||| |||||||||||| ||||||||||    
T  33279633 aaaatcgcaacatttcaaaacttaaagggcgaaaagtgcagtttagcct 33279585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 184 - 232
Target Start/End: Complemental strand, 40836229 - 40836181
Alignment:
Q  184 ccaaaatcgcaaaattttgaaacttaaggggcgaaaagtggagtttagc 232  Q
    |||||||||||| ||||| ||||||| ||| ||||||||| ||||||||    
T  40836229 ccaaaatcgcaacattttaaaacttaggggacgaaaagtgtagtttagc 40836181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 104; Significance: 8e-52; HSPs: 51)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 104; E-Value: 8e-52
Query Start/End: Original strand, 18 - 235
Target Start/End: Complemental strand, 38408851 - 38408627
Alignment:
Q  18 cctttcagcccaaaattgctaagaagatgccatatgtcctagaaaaggggtcataatcgcaactttttgttaagataacgggtcaaaaaacatatttccc 117  Q
    ||||||| |||||||||||| |||||||||||  ||||| |||||| |||||||||| |||||||||||| ||||||| |||||||||||||||||||||    
T  38408851 cctttcatcccaaaattgctcagaagatgccacgtgtcccagaaaatgggtcataatagcaactttttgtaaagataaggggtcaaaaaacatatttccc 38408752  T
Q  118 ttatgttagggggtcaaaagagcatatttccc-------agggggtcacttttgccannnnnnnnaata-ggggccaaaatcgcaaaattttgaaactta 209  Q
    |||||||| | ||||||||||||||||||| |       ||||||||||||||||||        |||| |||||||||||||||| |||||||||||||    
T  38408751 ttatgtta-gtggtcaaaagagcatatttctctaaacatagggggtcacttttgccattttttttaatagggggccaaaatcgcaatattttgaaactta 38408653  T
Q  210 aggggcgaaaagtggagtttagccta 235  Q
     ||| |||||||||||||||||||||    
T  38408652 ggggacgaaaagtggagtttagccta 38408627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 18 - 235
Target Start/End: Original strand, 25556956 - 25557180
Alignment:
Q  18 cctttcagcccaaaattgctaagaagatgccatatgtcctagaaaaggggtcataatcgcaactttttgttaagataacgggtcaaaaaacatatttccc 117  Q
    ||||||| |||||||||||| |||||| ||||  ||||| | |||||||| |||||| |||||||||||| ||||||| |||||||||||||||||||||    
T  25556956 cctttcatcccaaaattgctgagaagacgccacgtgtcccaaaaaaggggccataattgcaactttttgtaaagataaggggtcaaaaaacatatttccc 25557055  T
Q  118 ttatgttagggggtcaaaagagcatatttccc-------agggggtcacttttgccannnnnnnnaataggggccaaaatcgcaaaattttgaaacttaa 210  Q
    ||||||||||||||||||||||||||||||||       ||||||||||||||||||        |   |||| ||||||||||| |||||||||||||     
T  25557056 ttatgttagggggtcaaaagagcatatttccctaaacatagggggtcacttttgccatttttttaatagggggtcaaaatcgcaacattttgaaacttag 25557155  T
Q  211 ggggcgaaaagtggagtttagccta 235  Q
    |||||||||||| ||||||||||||    
T  25557156 ggggcgaaaagtagagtttagccta 25557180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 18 - 149
Target Start/End: Original strand, 31055395 - 31055526
Alignment:
Q  18 cctttcagcccaaaattgctaagaagatgccatatgtcctagaaaaggggtcataatcgcaactttttgttaagataacgggtcaaaaaacatatttccc 117  Q
    ||||||| |||||||||||| |||||||||||  ||||| |||||||||||||||||||||| ||||||| ||||||| |||||||||||||||||||||    
T  31055395 cctttcatcccaaaattgctcagaagatgccacgtgtcccagaaaaggggtcataatcgcaattttttgtaaagataaggggtcaaaaaacatatttccc 31055494  T
Q  118 ttatgttagggggtcaaaagagcatatttccc 149  Q
    |||||||| |||||||||||||||||||||||    
T  31055495 ttatgttaaggggtcaaaagagcatatttccc 31055526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 26 - 233
Target Start/End: Original strand, 40428728 - 40428941
Alignment:
Q  26 cccaaaattgctaagaagatgccatatgtcctagaaaaggggtcataatcgcaactttttgttaagataacgggtcaaaaaacatatttcccttatgtta 125  Q
    |||||||||||| |||||| ||||  ||||| | |||||||||||||||||||| ||||||| ||||||| |||||||||| ||||||||||||||||||    
T  40428728 cccaaaattgctgagaagacgccacgtgtcccaaaaaaggggtcataatcgcaattttttgtaaagataaggggtcaaaaagcatatttcccttatgtta 40428827  T
Q  126 gggggtcaaaagagcatatttccc------agggggtcacttttgccannnnnnnnaataggggccaaaatcgcaaaattttgaaacttaaggggcgaaa 219  Q
    || |||||||||| ||||||||||        ||||| ||||||||||        |||||||| ||||||||||| |||||||||||||  ||||||||    
T  40428828 ggaggtcaaaagaacatatttccctaaacacaggggtgacttttgccatattttttaataggggtcaaaatcgcaacattttgaaacttagagggcgaaa 40428927  T
Q  220 agtggagtttagcc 233  Q
    |||| |||||||||    
T  40428928 agtgaagtttagcc 40428941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 20 - 149
Target Start/End: Original strand, 16901080 - 16901209
Alignment:
Q  20 tttcagcccaaaattgctaagaagatgccatatgtcctagaaaaggggtcataatcgcaactttttgttaagataacgggtcaaaaaacatatttccctt 119  Q
    ||||| |||||||||||| |||||| ||||  ||||| | |||||||| ||||||||||||||||||| ||||||| |||||||||||||||||||||||    
T  16901080 tttcatcccaaaattgctgagaagacgccacgtgtcccaaaaaaggggccataatcgcaactttttgtaaagataaggggtcaaaaaacatatttccctt 16901179  T
Q  120 atgttagggggtcaaaagagcatatttccc 149  Q
    |||||||| |||||||||||||||||||||    
T  16901180 atgttaggaggtcaaaagagcatatttccc 16901209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 29 - 236
Target Start/End: Complemental strand, 36641355 - 36641140
Alignment:
Q  29 aaaattgctaagaagatgccatatgtcctagaaaaggggtcataatcgcaactttttgttaagataacgggtcaaaaaacatatttcccttatgttaggg 128  Q
    ||||||||| |||||| ||||| ||||| | ||||||| |||||||||||||||||| | |||||||||||||||||| ||||||||||||||||||||     
T  36641355 aaaattgctgagaagacgccatgtgtcccaaaaaagggatcataatcgcaactttttataaagataacgggtcaaaaagcatatttcccttatgttagga 36641256  T
Q  129 ggtcaaaagagcatatttccc-------agggggtcacttttgccannnnnnnnaatagggg-ccaaaatcgcaaaattttgaaacttaaggggcgaaaa 220  Q
    ||||||||||||||||||| |       ||||| ||||||||||||        |||||||| |||||||| ||| |||||||||||||   ||||||||    
T  36641255 ggtcaaaagagcatatttctctaaacataggggctcacttttgccattttttttaataggggaccaaaatcacaatattttgaaacttagaaggcgaaaa 36641156  T
Q  221 gtggagtttagcctat 236  Q
    ||| ||||||||||||    
T  36641155 gtgaagtttagcctat 36641140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 18 - 146
Target Start/End: Complemental strand, 10379504 - 10379377
Alignment:
Q  18 cctttcagcccaaaattgctaagaagatgccatatgtcctagaaaaggggtcataatcgcaactttttgttaagataacgggtcaaaaaacatatttccc 117  Q
    ||||||| ||||||||| || |||||||||||  ||||  |||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||    
T  10379504 cctttcatcccaaaatttctcagaagatgccacttgtctcagaaaaggggtcataatcgcaactttttgtaaagataaggggtcaaaaaacatatttccc 10379405  T
Q  118 ttatgttagggggtcaaaagagcatattt 146  Q
    |||||||| ||||||||||||||||||||    
T  10379404 ttatgtta-ggggtcaaaagagcatattt 10379377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 18 - 233
Target Start/End: Complemental strand, 18695226 - 18695004
Alignment:
Q  18 cctttcagcccaaaattgctaagaagatgccatatgtcctagaaaaggggtcataatcgcaactttttgttaagataacgggtcaaaaaacatatttccc 117  Q
    ||||||| | |||||||||| |||||| ||||  ||||| | |||||||| ||||||||||||||||||| ||||||| |||||||||| ||||||||||    
T  18695226 cctttcatctcaaaattgctgagaagacgccacgtgtcccaaaaaaggggccataatcgcaactttttgtaaagataaggggtcaaaaagcatatttccc 18695127  T
Q  118 ttatgttagggggtcaaaagagcatatttccc------agggggtcacttttgccannnnnnnnaata-ggggccaaaatcgcaaaattttgaaacttaa 210  Q
    |||||||||| |||||||||||||||||||||        ||||||||||||||||        |||| |||| ||||||||||| ||||| |||||||     
T  18695126 ttatgttaggaggtcaaaagagcatatttccctaaacataggggtcacttttgccattttttttaatagggggtcaaaatcgcaacattttaaaacttag 18695027  T
Q  211 ggggcgaaaagtggagtttagcc 233  Q
     |||||||||||| |||||||||    
T  18695026 agggcgaaaagtgaagtttagcc 18695004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 29 - 239
Target Start/End: Original strand, 16307568 - 16307787
Alignment:
Q  29 aaaattgctaagaagatgccatatgtcctagaaaaggggtcataatcgcaactttttgttaagataacgggtcaaaaaacatatttcccttatgtta-gg 127  Q
    ||||||||| |||||| |||| |||||| | ||||||||||||||| |||||||||||| ||||||| | |||||||||||||||| |||||||||| ||    
T  16307568 aaaattgctgagaagacgccacatgtccaaaaaaaggggtcataattgcaactttttgtaaagataaggagtcaaaaaacatattttccttatgttaggg 16307667  T
Q  128 gggtcaaaagagcatatttccc-------agggggtcacttttgccannnnnnnnaataggg-gccaaaatcgcaaaattttgaaacttaaggggcgaaa 219  Q
    ||||||||||||||||||||||       |||||||||||||||| |        ||||||| || |||||||||| ||||| |||||||| ||||||||    
T  16307668 gggtcaaaagagcatatttccctaaacatagggggtcacttttgcaattttttttaatagggagctaaaatcgcaacattttaaaacttaaagggcgaaa 16307767  T
Q  220 agtggagtttagcctatatt 239  Q
    ||||||  ||||||| ||||    
T  16307768 agtggaccttagcctttatt 16307787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 29 - 235
Target Start/End: Complemental strand, 245806 - 245594
Alignment:
Q  29 aaaattgctaagaagatgccatatgtcctagaaaaggggtcataatcgcaactttttgttaagataacgggtcaaaaaacatatttcccttatgttaggg 128  Q
    ||||||||| |||||| ||||  ||||| | |||||||| ||||||||||||||||||| ||||||| |||||||||| ||||||||||||||||||||     
T  245806 aaaattgctgagaagacgccacgtgtcccaaaaaaggggccataatcgcaactttttgtaaagataaggggtcaaaaagcatatttcccttatgttagga 245707  T
Q  129 ggtcaaaagagcatatttccc------agggggtcacttttgccannnnnnnnaataggggccaaaatcgcaaaattttgaaacttaaggggcgaaaagt 222  Q
    |||||||||||||||||||||        ||||||||||||||||        |   ||||||||||| |||| |||||||||||||  |||||||||||    
T  245706 ggtcaaaagagcatatttccctaaacataggggtcacttttgccatttttttaatagggggccaaaattgcaatattttgaaacttagagggcgaaaagt 245607  T
Q  223 ggagtttagccta 235  Q
    | |||||| ||||    
T  245606 gaagtttaaccta 245594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 29 - 150
Target Start/End: Original strand, 10293179 - 10293300
Alignment:
Q  29 aaaattgctaagaagatgccatatgtcctagaaaaggggtcataatcgcaactttttgttaagataacgggtcaaaaaacatatttcccttatgttaggg 128  Q
    |||| |||| |||||| |||| ||||| || ||||| |||||||||||||||||||||  ||||||| | |||||||||||||||||||||||||||||     
T  10293179 aaaaatgctgagaagacgccacatgtcttaaaaaagaggtcataatcgcaactttttggaaagataaggagtcaaaaaacatatttcccttatgttagga 10293278  T
Q  129 ggtcaaaagagcatatttccca 150  Q
    ||||||||||||||||||||||    
T  10293279 ggtcaaaagagcatatttccca 10293300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 21 - 234
Target Start/End: Original strand, 26639121 - 26639342
Alignment:
Q  21 ttcagcccaaaattgctaagaagatgccatatgtcctagaaaaggggtcataatcgcaactttttgttaagataacgggtcaaaaaacatatttccctta 120  Q
    |||| |||||||||| | |||||| ||||  ||||| | ||||| || |||||| |||||||||||| ||||||| |||||||||  |||||||||||||    
T  26639121 ttcatcccaaaattgttgagaagacgccacgtgtcccaaaaaagaggccataattgcaactttttgtaaagataaggggtcaaaacgcatatttccctta 26639220  T
Q  121 tgttagggggtcaaaagagcatatttccc-------agggggtcacttttgccannnnnnnnaatagggg-ccaaaatcgcaaaattttgaaacttaagg 212  Q
    ||||||| |||||||||||||||||||||       | ||||||||||||||||        || ||||| |||||||||||| |||||||||||||  |    
T  26639221 tgttaggaggtcaaaagagcatatttccctaaacatatggggtcacttttgccattttttttaacaggggaccaaaatcgcaacattttgaaacttagag 26639320  T
Q  213 ggcgaaaagtggagtttagcct 234  Q
    | ||||||||| ||||||||||    
T  26639321 gacgaaaagtgaagtttagcct 26639342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 26 - 149
Target Start/End: Original strand, 41663612 - 41663736
Alignment:
Q  26 cccaaaattgctaagaagatgccatatgtcctagaaaaggggtcataatcgcaactttttgttaagataacgggtcaaaaaa-catatttcccttatgtt 124  Q
    ||||||||||||||||||||||||  ||||| | |||||||| ||||||||||| ||||||  || |||| | ||||||||| |||||||||||||||||    
T  41663612 cccaaaattgctaagaagatgccacgtgtcccaaaaaaggggccataatcgcaattttttgagaaaataaagagtcaaaaaatcatatttcccttatgtt 41663711  T
Q  125 agggggtcaaaagagcatatttccc 149  Q
    | |||||||||||||||||||||||    
T  41663712 atggggtcaaaagagcatatttccc 41663736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 26 - 149
Target Start/End: Original strand, 38476559 - 38476682
Alignment:
Q  26 cccaaaattgctaagaagatgccatatgtcctagaaaaggggtcataatcgcaactttttgttaagataacgggtcaaaaaa-catatttcccttatgtt 124  Q
    |||||||||||| |||||| ||||  ||||| | ||||||| |||||||||||||||||||  ||||||| ||||||||| | |||||||||||||||||    
T  38476559 cccaaaattgctgagaagacgccacgtgtcccaaaaaaggg-tcataatcgcaactttttgagaagataaggggtcaaaagatcatatttcccttatgtt 38476657  T
Q  125 agggggtcaaaagagcatatttccc 149  Q
    | |||||||||||||||||||||||    
T  38476658 atggggtcaaaagagcatatttccc 38476682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 18 - 149
Target Start/End: Original strand, 17825578 - 17825709
Alignment:
Q  18 cctttcagcccaaaattgctaagaagatgccatatgtcctagaaaaggggtcataatcgcaactttttgttaagataacgggtcaaaa-aacatatttcc 116  Q
    ||||||| | |||||||  | |||||| ||||  ||||| | |||||||| ||||||||||||||||||  ||||||| ||||||||| ||||||||||     
T  17825578 cctttcatctcaaaattttttagaagacgccacgtgtcccaaaaaaggggccataatcgcaactttttgacaagataaagggtcaaaagaacatatttct 17825677  T
Q  117 cttatgttagggggtcaaaagagcatatttccc 149  Q
    ||||||||| |||||||||||||||||||||||    
T  17825678 cttatgtta-ggggtcaaaagagcatatttccc 17825709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 69 - 149
Target Start/End: Original strand, 23765522 - 23765602
Alignment:
Q  69 cataatcgcaactttttgttaagataacgggtcaaaaaacatatttcccttatgttagggggtcaaaagagcatatttccc 149  Q
    ||||||||||||||||||| |||||||  | ||||||| |||||||||||||||||||| |||||||||||||||||||||    
T  23765522 cataatcgcaactttttgtaaagataaatgatcaaaaagcatatttcccttatgttaggaggtcaaaagagcatatttccc 23765602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 69 - 149
Target Start/End: Original strand, 23815370 - 23815450
Alignment:
Q  69 cataatcgcaactttttgttaagataacgggtcaaaaaacatatttcccttatgttagggggtcaaaagagcatatttccc 149  Q
    ||||||||||||||||||| |||||||  | ||||||| |||||||||||||||||||| |||||||||||||||||||||    
T  23815370 cataatcgcaactttttgtaaagataaatgatcaaaaagcatatttcccttatgttaggaggtcaaaagagcatatttccc 23815450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 60 - 149
Target Start/End: Complemental strand, 7187370 - 7187281
Alignment:
Q  60 aaaaggggtcataatcgcaactttttgttaagataacgggtcaaaaaacatatttcccttatgttagggggtcaaaagagcatatttccc 149  Q
    |||| ||||||||||||||||||||||| || ||||  ||||| ||||||||||||||||||||||| |||||||||||  |||||||||    
T  7187370 aaaaagggtcataatcgcaactttttgtaaaaataattggtcataaaacatatttcccttatgttagagggtcaaaagaatatatttccc 7187281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 29 - 146
Target Start/End: Complemental strand, 19169555 - 19169438
Alignment:
Q  29 aaaattgctaagaagatgccatatgtcctagaaaaggggtcataatcgcaactttttgttaagataacgggtcaaaaaacatatttcccttatgttaggg 128  Q
    ||||||||| |||||| ||||  ||| | | |||| ||| |||||| |||||||||||| ||||||| |||||||||| |||||||||||||||||| |     
T  19169555 aaaattgctgagaagacgccacgtgttcaaaaaaatgggccataattgcaactttttgtaaagataaggggtcaaaaagcatatttcccttatgttaaga 19169456  T
Q  129 ggtcaaaagagcatattt 146  Q
    ||||||| ||||||||||    
T  19169455 ggtcaaatgagcatattt 19169438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 60 - 149
Target Start/End: Original strand, 23040071 - 23040163
Alignment:
Q  60 aaaaggggtcataatcgcaactttttgttaagataacgggtcaaaa-aacatatttcccttatgttaggg--ggtcaaaagagcatatttccc 149  Q
    |||| ||||||||||||||||||||||  ||||||| ||||||||| | |||||||||||||||||||||  |||||||||||||||||||||    
T  23040071 aaaaagggtcataatcgcaactttttgagaagataaggggtcaaaagatcatatttcccttatgttaggggaggtcaaaagagcatatttccc 23040163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 26 - 146
Target Start/End: Original strand, 17704676 - 17704795
Alignment:
Q  26 cccaaaattgctaagaagatgccatatgtcctagaaaaggggtcataatcgcaactttttgttaagataacgggtcaaaaaacatatttcccttatgtta 125  Q
    |||||||||||| |||| ||||||  | ||| | |||||||| ||||||  ||||||||||| ||||||| ||||||||||  |||||||||||||||||    
T  17704676 cccaaaattgctgagaacatgccacttatcccaaaaaaggggccataatttcaactttttgtaaagataaagggtcaaaaagtatatttcccttatgtta 17704775  T
Q  126 gggggtcaaaagagcatattt 146  Q
      |||||||||||||||||||    
T  17704776 -tgggtcaaaagagcatattt 17704795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 19 - 149
Target Start/End: Complemental strand, 7835931 - 7835802
Alignment:
Q  19 ctttcagcccaaaattgctaagaagatgccatatgtcctagaaaaggggtcataatcgcaactttttgttaagataacgggtcaaaaaacatatttccct 118  Q
    |||||| |||||| ||| | |||||| |||| |||||  | |||| ||| ||||||| || || ||||| ||||||| |||||||||||||||||| |||    
T  7835931 ctttcatcccaaagttgttgagaagacgccacatgtctaaaaaaaagggccataatcccacctctttgtaaagataaggggtcaaaaaacatattttcct 7835832  T
Q  119 tatgttagggggtcaaaagagcatatttccc 149  Q
    |||||||  ||||||||||||||||||||||    
T  7835831 tatgtta-tgggtcaaaagagcatatttccc 7835802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 18 - 230
Target Start/End: Original strand, 37961329 - 37961549
Alignment:
Q  18 cctttcagcccaaaattgctaagaagatgccatatgtcctagaaaaggggtcataatcgcaactttttgttaagataacgggtcaaaaaa-catatttcc 116  Q
    ||||||| |||||||||||| ||||||  |||  |||||   |||||||| |||||| |||||||||||  ||| ||| ||||||||| | ||| |||||    
T  37961329 cctttcatcccaaaattgctgagaagacaccacgtgtcccttaaaaggggccataattgcaactttttgagaagttaaggggtcaaaagatcatttttcc 37961428  T
Q  117 cttatgttagggggtcaaaagagcatatttccc-------agggggtcacttttgccannnnnnnnaataggggccaaaatcgcaaaattttgaaactta 209  Q
    ||||||||||| |||||||||||| ||||||||        |||| |||||||||| |        |||||| |||||||| |||| |||||||||||||    
T  37961429 cttatgttaggcggtcaaaagagcgtatttccctaaacatgggggatcacttttgctattttttttaataggagccaaaattgcaacattttgaaactta 37961528  T
Q  210 aggggcgaaaagtggagttta 230  Q
     |||| |||||||| ||||||    
T  37961529 gggggtgaaaagtgcagttta 37961549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 26 - 146
Target Start/End: Complemental strand, 2373360 - 2373240
Alignment:
Q  26 cccaaaattgctaagaagatgccatatgtcctagaaaaggggtcataatcgcaactttttgttaagataacgggtca-aaaaacatatttcccttatgtt 124  Q
    ||||||||||||||||||| ||||  |||||   |||||||||||||||||||| ||||||  || |||| |||||| || | |||||||||||||||||    
T  2373360 cccaaaattgctaagaagacgccacgtgtccccaaaaaggggtcataatcgcaaatttttgagaaaataaggggtcataatatcatatttcccttatgtt 2373261  T
Q  125 agggggtcaaaagagcatattt 146  Q
    |  |||||||||||||||||||    
T  2373260 a-tgggtcaaaagagcatattt 2373240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 69 - 148
Target Start/End: Original strand, 15885297 - 15885375
Alignment:
Q  69 cataatcgcaactttttgttaagataacgggtcaaaaaacatatttcccttatgttagggggtcaaaagagcatatttcc 148  Q
    |||||||| |||||||||| ||||||| ||||||| ||||||||||||||||||||| | ||||||||||| ||||||||    
T  15885297 cataatcgaaactttttgtaaagataa-gggtcaacaaacatatttcccttatgttaagaggtcaaaagagaatatttcc 15885375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 52 - 233
Target Start/End: Original strand, 35302029 - 35302217
Alignment:
Q  52 tgtcctagaaaaggggtcataatcgcaactttttgttaagataacgggtcaaaaaa--catatttcccttatgttagggggtcaaaagagcatatttccc 149  Q
    ||||| |||| ||||| |||||||||| ||||||   ||||||| ||||||||||   ||||||| | ||||||||||||||||||||||||||||||||    
T  35302029 tgtcccagaacaggggccataatcgcagcttttttagaagataa-gggtcaaaaagatcatatttacattatgttagggggtcaaaagagcatatttccc 35302127  T
Q  150 ------agggggtcacttttgccannnnnnnnaatag-gggccaaaatcgcaaaattttgaaacttaaggggcgaaaagtggagtttagcc 233  Q
           |||||||||||||||||        ||||| ||| ||||||||||| |||||||||||||||||| ||||| || |||||||||    
T  35302128 taaatatgggggtcacttttgcca-tttttataatagagggtcaaaatcgcaacattttgaaacttaaggggagaaaaatgcagtttagcc 35302217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 65 - 149
Target Start/End: Complemental strand, 34125236 - 34125151
Alignment:
Q  65 gggtcataatcgcaactttttgttaagataacgggtcaaaaaa-catatttcccttatgttagggggtcaaaagagcatatttccc 149  Q
    ||||||||||||||||||||||  |||||||  |||||||  | ||||||| |||||||||||||| |||||||||||||||||||    
T  34125236 gggtcataatcgcaactttttgagaagataagaggtcaaatgatcatattttccttatgttaggggatcaaaagagcatatttccc 34125151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 103 - 234
Target Start/End: Complemental strand, 8645935 - 8645796
Alignment:
Q  103 aaaaacatatttcccttatgttagggggtcaaaagagcatatttccc-------agggggtcacttttgccannnnnnnnaata-ggggccaaaatcgca 194  Q
    |||| |||||||||||||||||||| |||||||||||||||||||||        |||||||| ||||||||        |||| |||| ||||||||||    
T  8645935 aaaatcatatttcccttatgttaggaggtcaaaagagcatatttccctaaacattgggggtcaattttgccattttttttaatagggggtcaaaatcgca 8645836  T
Q  195 aaattttgaaacttaaggggcgaaaagtggagtttagcct 234  Q
    | ||||||||||| |  |||||||||||| ||||||||||    
T  8645835 acattttgaaactaagagggcgaaaagtgaagtttagcct 8645796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 180 - 243
Target Start/End: Complemental strand, 31648109 - 31648046
Alignment:
Q  180 ggggccaaaatcgcaaaattttgaaacttaaggggcgaaaagtggagtttagcctatattttat 243  Q
    ||||| |||||||||| ||||||||| ||| ||| |||||||||||||||||||| ||||||||    
T  31648109 ggggcgaaaatcgcaacattttgaaatttatgggacgaaaagtggagtttagcctttattttat 31648046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 66 - 121
Target Start/End: Complemental strand, 462941 - 462885
Alignment:
Q  66 ggtcataatcgcaactttttgttaagataacgggtcaaaa-aacatatttcccttat 121  Q
    |||||||||||||||||||||| ||||||| ||||||||| |||||||||| |||||    
T  462941 ggtcataatcgcaactttttgtaaagataaggggtcaaaagaacatatttctcttat 462885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 180 - 236
Target Start/End: Original strand, 18695253 - 18695309
Alignment:
Q  180 ggggccaaaatcgcaaaattttgaaacttaaggggcgaaaagtggagtttagcctat 236  Q
    |||||||||||||||| |||||||||| || ||||||||||||| | ||||||||||    
T  18695253 ggggccaaaatcgcaatattttgaaacatagggggcgaaaagtgcactttagcctat 18695309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 179 - 235
Target Start/End: Complemental strand, 23765474 - 23765418
Alignment:
Q  179 aggggccaaaatcgcaaaattttgaaacttaaggggcgaaaagtggagtttagccta 235  Q
    |||||||||||| |||| |||||||||| || ||||||||||||| |||||||||||    
T  23765474 aggggccaaaattgcaacattttgaaacatagggggcgaaaagtgcagtttagccta 23765418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 179 - 235
Target Start/End: Complemental strand, 23815322 - 23815266
Alignment:
Q  179 aggggccaaaatcgcaaaattttgaaacttaaggggcgaaaagtggagtttagccta 235  Q
    |||||||||||| |||| |||||||||| || ||||||||||||| |||||||||||    
T  23815322 aggggccaaaattgcaacattttgaaacatagggggcgaaaagtgcagtttagccta 23815266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 180 - 234
Target Start/End: Original strand, 17704833 - 17704887
Alignment:
Q  180 ggggccaaaatcgcaaaattttgaaacttaaggggcgaaaagtggagtttagcct 234  Q
    |||||||||||||||| ||||||||||||| ||| ||||||||| ||||| ||||    
T  17704833 ggggccaaaatcgcaatattttgaaacttaggggacgaaaagtgtagtttggcct 17704887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 108 - 240
Target Start/End: Original strand, 23040210 - 23040347
Alignment:
Q  108 catatttcccttatgttaggggg-tcaaaagagcatatttccc-----agggggtcacttttgccannnnnnnnaataggggccaaaatcgcaaaatttt 201  Q
    ||||||||||||||||||||||| |||||||||||||||||||     | ||||||||||||| |         | |||||| |||||||||||  ||||    
T  23040210 catatttcccttatgttaggggggtcaaaagagcatatttccctaaatatggggtcacttttgtcttttttttta-taggggtcaaaatcgcaacttttt 23040308  T
Q  202 gaaacttaaggggcgaaaagtggagtttagcctatattt 240  Q
     |||||||||||  |||||||| | ||||||||||||||    
T  23040309 aaaacttaagggatgaaaagtgtactttagcctatattt 23040347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 180 - 234
Target Start/End: Complemental strand, 24025074 - 24025020
Alignment:
Q  180 ggggccaaaatcgcaaaattttgaaacttaaggggcgaaaagtggagtttagcct 234  Q
    |||||||||||||||| ||||||||||||| |||||||| |||| | ||||||||    
T  24025074 ggggccaaaatcgcaatattttgaaacttagggggcgaatagtgcactttagcct 24025020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 182 - 235
Target Start/End: Original strand, 20654047 - 20654100
Alignment:
Q  182 ggccaaaatcgcaaaattttgaaacttaaggggcgaaaagtggagtttagccta 235  Q
    |||||||||| ||| ||||||||||||| ||| ||||||||| |||||||||||    
T  20654047 ggccaaaatcacaacattttgaaacttaggggtcgaaaagtgcagtttagccta 20654100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 182 - 235
Target Start/End: Original strand, 31648237 - 31648290
Alignment:
Q  182 ggccaaaatcgcaaaattttgaaacttaaggggcgaaaagtggagtttagccta 235  Q
    |||||||||||||| |||||||||| || ||| ||||||||| |||||||||||    
T  31648237 ggccaaaatcgcaacattttgaaacataggggacgaaaagtgcagtttagccta 31648290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 182 - 242
Target Start/End: Original strand, 2373398 - 2373458
Alignment:
Q  182 ggccaaaatcgcaaaattttgaaacttaaggggcgaaaagtggagtttagcctatatttta 242  Q
    ||||||||||||||  |||||||||||| |||  |||||||| ||||||||||| ||||||    
T  2373398 ggccaaaatcgcaactttttgaaacttaggggttgaaaagtgcagtttagcctaaatttta 2373458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 183 - 235
Target Start/End: Original strand, 7835962 - 7836014
Alignment:
Q  183 gccaaaatcgcaaaattttgaaacttaaggggcgaaaagtggagtttagccta 235  Q
    ||||||||||||| ||||| |||| |||| ||||||||||| |||||||||||    
T  7835962 gccaaaatcgcaatattttaaaacataagaggcgaaaagtgcagtttagccta 7836014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 176 - 231
Target Start/End: Complemental strand, 7835777 - 7835722
Alignment:
Q  176 aataggggccaaaatcgcaaaattttgaaacttaaggggcgaaaagtggagtttag 231  Q
    |||||||||||||||| ||| ||||| |||||||  |||||||||||| |||||||    
T  7835777 aataggggccaaaatcacaacattttaaaacttagagggcgaaaagtgaagtttag 7835722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 176 - 223
Target Start/End: Original strand, 8645996 - 8646043
Alignment:
Q  176 aataggggccaaaatcgcaaaattttgaaacttaaggggcgaaaagtg 223  Q
    ||||| |||||||||||||| ||||| |||| ||||||||||||||||    
T  8645996 aatagaggccaaaatcgcaacattttaaaacataaggggcgaaaagtg 8646043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 180 - 235
Target Start/End: Complemental strand, 31055368 - 31055313
Alignment:
Q  180 ggggccaaaatcgcaaaattttgaaacttaaggggcgaaaagtggagtttagccta 235  Q
    ||||||||||| |||| ||| |||||| || ||||||||||||| |||||||||||    
T  31055368 ggggccaaaattgcaacattatgaaacatagggggcgaaaagtgcagtttagccta 31055313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 179 - 241
Target Start/End: Complemental strand, 3597377 - 3597315
Alignment:
Q  179 aggggccaaaatcgcaaaattttgaaacttaaggggcgaaaagtggagtttagcctatatttt 241  Q
    ||||||||||||||||| |||   ||||||| ||||| |||| || |||||||||||||||||    
T  3597377 aggggccaaaatcgcaacattagtaaacttagggggccaaaactgtagtttagcctatatttt 3597315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 180 - 234
Target Start/End: Complemental strand, 16901050 - 16900996
Alignment:
Q  180 ggggccaaaatcgcaaaattttgaaacttaaggggcgaaaagtggagtttagcct 234  Q
    |||| ||||||||||| |||||||||| || | ||||||||||| ||||||||||    
T  16901050 ggggtcaaaatcgcaacattttgaaacataggaggcgaaaagtgcagtttagcct 16900996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 108 - 149
Target Start/End: Complemental strand, 20653952 - 20653912
Alignment:
Q  108 catatttcccttatgttagggggtcaaaagagcatatttccc 149  Q
    |||||||| ||||||||||||| |||||||||||||||||||    
T  20653952 catatttcacttatgttagggg-tcaaaagagcatatttccc 20653912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 184 - 233
Target Start/End: Complemental strand, 31576542 - 31576493
Alignment:
Q  184 ccaaaatcgcaaaattttgaaacttaaggggcgaaaagtggagtttagcc 233  Q
    ||||||| |||| ||||||||||||| ||| ||||||||| |||||||||    
T  31576542 ccaaaattgcaacattttgaaacttaggggtcgaaaagtgcagtttagcc 31576493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 180 - 228
Target Start/End: Complemental strand, 17704640 - 17704592
Alignment:
Q  180 ggggccaaaatcgcaaaattttgaaacttaaggggcgaaaagtggagtt 228  Q
    ||||| |||||||||||| ||||||||||| ||| ||||||||| ||||    
T  17704640 ggggctaaaatcgcaaaactttgaaacttaggggacgaaaagtgcagtt 17704592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 176 - 235
Target Start/End: Original strand, 23765635 - 23765695
Alignment:
Q  176 aatagggg-ccaaaatcgcaaaattttgaaacttaaggggcgaaaagtggagtttagccta 235  Q
    |||||||| ||||||| |||| ||||| |||||||  |||||||||||| |||||||||||    
T  23765635 aatagggggccaaaattgcaacattttaaaacttagagggcgaaaagtgaagtttagccta 23765695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 176 - 235
Target Start/End: Original strand, 23815483 - 23815543
Alignment:
Q  176 aatagggg-ccaaaatcgcaaaattttgaaacttaaggggcgaaaagtggagtttagccta 235  Q
    |||||||| ||||||| |||| ||||| |||||||  |||||||||||| |||||||||||    
T  23815483 aatagggggccaaaattgcaacattttaaaacttagagggcgaaaagtgaagtttagccta 23815543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 176 - 223
Target Start/End: Complemental strand, 40428697 - 40428649
Alignment:
Q  176 aatagggg-ccaaaatcgcaaaattttgaaacttaaggggcgaaaagtg 223  Q
    |||||||| |||||||||||| |||||||||| || |||||||||||||    
T  40428697 aataggggaccaaaatcgcaacattttgaaacatagggggcgaaaagtg 40428649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 95; Significance: 2e-46; HSPs: 41)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 18 - 234
Target Start/End: Complemental strand, 17648466 - 17648242
Alignment:
Q  18 cctttcagcccaaaattgctaagaagatgccatatgtcctagaaaaggggtcataatcgcaactttttgttaagataacgggtcaaaaaacatatttccc 117  Q
    ||||||| || ||||||||| |||||| ||||  ||||||| ||| |||| ||||||||||||||||||| ||||||| |||||||||| ||||||||||    
T  17648466 cctttcatccaaaaattgctgagaagaggccacgtgtcctaaaaagggggccataatcgcaactttttgtaaagataaggggtcaaaaagcatatttccc 17648367  T
Q  118 ttatgttagggggtcaaaagagcatatttccc-------agggggtcacttttgccannnnnnnnaataggg-gccaaaatcgcaaaattttgaaactta 209  Q
    |||||||||| |||||||||||||||||||||       ||||||||||||||||||        ||||||| ||||||||| ||| |||||||||||||    
T  17648366 ttatgttaggaggtcaaaagagcatatttccctaaacatagggggtcacttttgccattttttttaatagggagccaaaatcacaacattttgaaactta 17648267  T
Q  210 aggggcgaaaagtggagtttagcct 234  Q
      |||||||||||| ||||||||||    
T  17648266 gagggcgaaaagtgaagtttagcct 17648242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 29 - 229
Target Start/End: Original strand, 12723353 - 12723561
Alignment:
Q  29 aaaattgctaagaagatgccatatgtcctagaaaaggggtcataatcgcaactttttgttaagataacgggtcaaaaaacatatttcccttatgttaggg 128  Q
    ||||||||| |||||| ||||| ||||| | |||||||  ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||     
T  12723353 aaaattgctgagaagacgccatgtgtcccaaaaaagggaccataatcgcaactttttgtaaagataacgggtcaaaaaacatatttcccttatgttagga 12723452  T
Q  129 ggtcaaaagagcatatttccc-------agggggtcacttttgccannnnnnnnaata-ggggccaaaatcgcaaaattttgaaacttaaggggcgaaaa 220  Q
    ||||||||||||||||||| |       ||||||||| ||||||||        |||| |||||||||||||||| |||||||||||||  |||||||||    
T  12723453 ggtcaaaagagcatatttctctaaacatagggggtcatttttgccattttttttaatagggggccaaaatcgcaacattttgaaacttagagggcgaaaa 12723552  T
Q  221 gtggagttt 229  Q
    ||| |||||    
T  12723553 gtgaagttt 12723561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 28 - 234
Target Start/End: Original strand, 4518958 - 4519172
Alignment:
Q  28 caaaattgctaagaagatgccatatgtcctagaaaaggggtcataatcgcaactttttgttaagataacgggtcaaaaaacatatttcccttatgttagg 127  Q
    |||||||| | |||||| ||||  ||||| | |||||||| ||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||    
T  4518958 caaaattgttgagaagacgccacgtgtcccaaaaaaggggccataatcgcaactttttgtaaagataaggggtcaaaaaacatatttcccttatgttagg 4519057  T
Q  128 gggtcaaaagagcatatttccc-------agggggtcacttttgccannnnnnnnaataggg-gccaaaatcgcaaaattttgaaacttaaggggcgaaa 219  Q
     | |||||||||||||||||||       ||||||||||||||||||        ||||||| ||||||||||||| |||||||||||||  || |||||    
T  4519058 agatcaaaagagcatatttccctaaacatagggggtcacttttgccattttttttaatagggagccaaaatcgcaacattttgaaacttagaggacgaaa 4519157  T
Q  220 agtggagtttagcct 234  Q
    |||| ||||||||||    
T  4519158 agtgaagtttagcct 4519172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 21 - 242
Target Start/End: Original strand, 8802484 - 8802712
Alignment:
Q  21 ttcagcccaaaattgctaagaagatgccatatgtcctagaaaaggggtcataatcgcaactttttgttaagataacgggtcaaaaaacatatttccctta 120  Q
    |||| |||||||||||| |||||| |||| |||| | | |||||||| ||||||||||||||||||| ||||||| |||||||||| | |||||||||||    
T  8802484 ttcatcccaaaattgctgagaagacgccacatgttccaaaaaaggggccataatcgcaactttttgtaaagataaggggtcaaaaagc-tatttccctta 8802582  T
Q  121 tgttagggggtcaaaagagcatatttccc-------agggggtcacttttgccannnnnnnnaata-ggggccaaaatcgcaaaattttgaaacttaagg 212  Q
    ||||||| |||||||||||||||||||||       || |||||||||||||||        |||| |||||||||||||||| |||||||||||||  |    
T  8802583 tgttaggaggtcaaaagagcatatttccctaaacatagagggtcacttttgccattttttttaatagggggccaaaatcgcaacattttgaaacttagag 8802682  T
Q  213 ggcgaaaagtggagtttagcctatatttta 242  Q
    ||||||||||  ||||||||| ||| ||||    
T  8802683 ggcgaaaagtaaagtttagccaataattta 8802712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 18 - 149
Target Start/End: Original strand, 19391468 - 19391599
Alignment:
Q  18 cctttcagcccaaaattgctaagaagatgccatatgtcctagaaaaggggtcataatcgcaactttttgttaagataacgggtcaaaaaacatatttccc 117  Q
    ||||||| || ||||||||| |||||| ||||  ||||| | |||||||| ||||||||||||||||||| ||||||| |||||||||||||||||||||    
T  19391468 cctttcatccaaaaattgctgagaagacgccacgtgtcccaaaaaaggggccataatcgcaactttttgtaaagataaggggtcaaaaaacatatttccc 19391567  T
Q  118 ttatgttagggggtcaaaagagcatatttccc 149  Q
    |||||||||| |||||||||||||||||||||    
T  19391568 ttatgttaggaggtcaaaagagcatatttccc 19391599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 60 - 233
Target Start/End: Original strand, 30784387 - 30784568
Alignment:
Q  60 aaaaggggtcataatcgcaactttttgttaagataacgggtcaaaaaacatatttcccttatgttagggggtcaaaagagcatatttccc-------agg 152  Q
    |||| ||| ||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||       | |    
T  30784387 aaaaagggccataatcgcaactttttgtaaagataaggggtcaaaaaacatatttcccttatgttaggaggtcaaaagagcatatttccctaaacatacg 30784486  T
Q  153 gggtcacttttgccannnnnnnnaat-aggggccaaaatcgcaaaattttgaaacttaaggggcgaaaagtggagtttagcc 233  Q
    |||||||||||||||        ||| ||||||||||||||||| |||||||||||||  |||||||||||| |||||||||    
T  30784487 gggtcacttttgccattttttttaataaggggccaaaatcgcaacattttgaaacttagagggcgaaaagtgaagtttagcc 30784568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 28 - 241
Target Start/End: Complemental strand, 38630268 - 38630047
Alignment:
Q  28 caaaattgctaagaagatgccatatgtcctagaaaaggggtcataatcgcaactttttgttaagataacgggtcaaaaaacatatttcccttatgttagg 127  Q
    |||||||||| |||||| ||||  ||||| | |||||||||||||||||||||||||||| ||||||| |||||||||| ||||||||||||||||||||    
T  38630268 caaaattgctgagaagacgccacgtgtcccaaaaaaggggtcataatcgcaactttttgtaaagataaggggtcaaaaagcatatttcccttatgttagg 38630169  T
Q  128 gggtcaaaagagcatatttccc-------agggggtcacttttgccannnnnnnnaatagggg-ccaaaatcgcaaaattttgaaacttaaggggcgaaa 219  Q
     |||||||||||||||||||||       |||| ||||||||| |||        ||||||||  ||||||||||| |||||||||||||  ||||||||    
T  38630168 aggtcaaaagagcatatttccctaaacatagggagtcacttttaccattttttttaataggggatcaaaatcgcaacattttgaaacttagagggcgaaa 38630069  T
Q  220 agtggagtttagcctatatttt 241  Q
    | || |||||| ||||| ||||    
T  38630068 aatgaagtttaacctatctttt 38630047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 26 - 243
Target Start/End: Complemental strand, 44147185 - 44146962
Alignment:
Q  26 cccaaaattgctaagaagatgccatatgtcctagaaaaggggtcataatcgcaactttttgttaagataacgggtcaaaaaacatatttcccttatgtta 125  Q
    |||||||||||| |||||| ||||| | ||| | ||||||||||||||||||||||||| || ||||||| |||||||||| ||||||||||||||||||    
T  44147185 cccaaaattgctgagaagacgccatgtatcccaaaaaaggggtcataatcgcaactttt-gtaaagataaggggtcaaaaagcatatttcccttatgtta 44147087  T
Q  126 gggggtcaaaagagcatatttccc------agggggtcacttttgccannnnnnnnaata-ggggccaaaatcgcaaaattttgaaacttaaggggcgaa 218  Q
    || |||||||| ||||||||||||        ||||||||||||||||        |||| |||||||||||||||| ||||||||||||   |||||||    
T  44147086 ggaggtcaaaatagcatatttccctaaacataggggtcacttttgccattttttttaatagggggccaaaatcgcaacattttgaaacttggagggcgaa 44146987  T
Q  219 aagtggagtttagcctatattttat 243  Q
    ||||| ||||||||||  |||||||    
T  44146986 aagtgaagtttagccttaattttat 44146962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 29 - 233
Target Start/End: Complemental strand, 19924477 - 19924265
Alignment:
Q  29 aaaattgctaagaagatgccatatgtcctagaaaaggggtcataatcgcaactttttgttaagataacgggtcaaaaaacatatttcccttatgttaggg 128  Q
    ||||||||| |||||| ||||  ||||| | |||||||||||||||||||||||||||| ||||||| |||||||||| ||||||||||||||||||||     
T  19924477 aaaattgctgagaagacgccacgtgtcccaaaaaaggggtcataatcgcaactttttgtaaagataaggggtcaaaaagcatatttcccttatgttagga 19924378  T
Q  129 ggtcaaaagagcatatttccc-------agggggtcacttttgccannnnnnnnaat-aggggccaaaatcgcaaaattttgaaacttaaggggcgaaaa 220  Q
    ||||| ||||| |||||||||       ||||||||||||||||||        ||| |||||||||||| |||| ||||| |||||||  |||||||||    
T  19924377 ggtcagaagagtatatttccctaaacatagggggtcacttttgccattttttttaataaggggccaaaattgcaacattttaaaacttagagggcgaaaa 19924278  T
Q  221 gtggagtttagcc 233  Q
    |||  ||||||||    
T  19924277 gtgaggtttagcc 19924265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 29 - 230
Target Start/End: Original strand, 5192363 - 5192572
Alignment:
Q  29 aaaattgctaagaagatgccatatgtcctagaaaaggggtcataatcgcaactttttgttaagataacgggtcaaaaaacatatttcccttatgttaggg 128  Q
    ||||||||| |||||| ||||  ||||| | |||||||| ||||||||||||||||||| |||||||  |||||||||||||||||||||||||||| |     
T  5192363 aaaattgctgagaagacgccacgtgtcccaaaaaaggggccataatcgcaactttttgtaaagataagaggtcaaaaaacatatttcccttatgttaaga 5192462  T
Q  129 ggtcaaaagagcatatttccc-------agggggtcacttttgccannnnnnnnaatag-gggccaaaatcgcaaaattttgaaacttaaggggcgaaaa 220  Q
    |||||||||||||||||||||       ||| ||||||||||||||        ||||| || |||||||||||| ||||| |||||||  |||||||||    
T  5192463 ggtcaaaagagcatatttccctaaacataggaggtcacttttgccattttttttaatagaggaccaaaatcgcaacattttaaaacttagagggcgaaaa 5192562  T
Q  221 gtggagttta 230  Q
    ||| ||||||    
T  5192563 gtgaagttta 5192572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 28 - 233
Target Start/End: Original strand, 21666365 - 21666577
Alignment:
Q  28 caaaattgctaagaagatgccatatgtcctagaaaaggggtcataatcgcaactttttgttaagataacgggtcaaaaaacatatttcccttatgttagg 127  Q
    |||||||||| |||||| ||||| ||||| | |||||||| |||||| |||||||| | | ||||||| |||||||||||||||||||||||||||||||    
T  21666365 caaaattgctgagaagacgccatgtgtcccaaaaaaggggccataattgcaactttatctaaagataaggggtcaaaaaacatatttcccttatgttagg 21666464  T
Q  128 gggtcaaaagagcatatttccc-------agggggtcacttttgccannnnnnnnaataggggccaaaatcgcaaaattttgaaacttaaggggcgaaaa 220  Q
    ||||||| ||||||||||||||        |||||||||||||||||        |   |||||||||||||||| ||||||||||| | ||||| ||||    
T  21666465 gggtcaagagagcatatttccctaaacatggggggtcacttttgccatttttttaatagggggccaaaatcgcaacattttgaaactaagggggcaaaaa 21666564  T
Q  221 gtggagtttagcc 233  Q
    ||| |||| ||||    
T  21666565 gtgcagttcagcc 21666577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 26 - 235
Target Start/End: Original strand, 22452262 - 22452479
Alignment:
Q  26 cccaaaattgctaagaagatgccatatgtcctagaaaaggggtcataatcgcaactttttgttaagataacgggtcaaaaaacatatttcccttatgtta 125  Q
    |||||||||||| |||||| ||||  ||||| | |||| |||  ||| |||||||||||||| |||||||  ||||||||| ||||||||||||||||||    
T  22452262 cccaaaattgctgagaagacgccacgtgtcccaaaaaaagggctatattcgcaactttttgtaaagataagaggtcaaaaagcatatttcccttatgtta 22452361  T
Q  126 gggggtcaaaagagcatatttccc-------agggggtcacttttgccannnnnnnnaatagggg-ccaaaatcgcaaaattttgaaacttaaggggcga 217  Q
    || |||||||||||||||||||||       | | |||||||||||||         |||||||| |||||||||||| ||||||||| ||| ||||| |    
T  22452362 ggaggtcaaaagagcatatttccctaaatatatgaggtcacttttgccgttttttttaataggggaccaaaatcgcaatattttgaaatttagggggcta 22452461  T
Q  218 aaagtggagtttagccta 235  Q
    ||||||||||||||||||    
T  22452462 aaagtggagtttagccta 22452479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 60 - 235
Target Start/End: Original strand, 4807723 - 4807907
Alignment:
Q  60 aaaaggggtcataatcgcaactttttgttaagataacgggtcaaaaaacatatttcccttatgttagggggtcaaaagagcatatttcc-----ca---g 151  Q
    |||||||| ||||||||||||||||||| ||||||| |||||||||| |||||||||||||||||||| |||||||||| |||||||||     ||        
T  4807723 aaaaggggccataatcgcaactttttgtaaagataaggggtcaaaaagcatatttcccttatgttaggaggtcaaaagaacatatttccttaaacataga 4807822  T
Q  152 ggggtcacttttgccannnnnnnnaataggggcca-aaatcgcaaaattttgaaacttaaggggcgaaaagtggagtttagccta 235  Q
    |||||||||||||| |        |||||||| || ||||||||| ||||||||||||||  ||||||||||| |||||||||||    
T  4807823 ggggtcacttttgctattttttttaatagggggcataaatcgcaacattttgaaacttaaaaggcgaaaagtgaagtttagccta 4807907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 18 - 149
Target Start/End: Complemental strand, 33895596 - 33895466
Alignment:
Q  18 cctttcagcccaaaattgctaagaagatgccatatgtcctagaaaaggggtcataatcgcaactttttgttaagataacgggtcaaaaaacatatttccc 117  Q
    ||||||| || |||||| || |||||| ||||  ||||| | |||||||  |||||| |||||||||||| ||||||| |||| ||||||||||||||||    
T  33895596 cctttcatccaaaaatttctgagaagacgccacgtgtccaaaaaaagggc-cataattgcaactttttgtaaagataaggggttaaaaaacatatttccc 33895498  T
Q  118 ttatgttagggggtcaaaagagcatatttccc 149  Q
    |||||||||| |||||||||||||||||||||    
T  33895497 ttatgttaggaggtcaaaagagcatatttccc 33895466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 18 - 147
Target Start/End: Original strand, 32400403 - 32400532
Alignment:
Q  18 cctttcagcccaaaattgctaagaagatgccatatgtcctagaaaaggggtcataatcgcaactttttgttaagataacgggtcaaaaaacatatttccc 117  Q
    |||||||  ||||||||||| ||||||  |||  ||| | | ||||||||||||||| |||||||||||| |||||||  ||||||||  ||||||||||    
T  32400403 cctttcataccaaaattgctgagaagacaccacgtgttccaaaaaaggggtcataattgcaactttttgtaaagataaatggtcaaaaggcatatttccc 32400502  T
Q  118 ttatgttagggggtcaaaagagcatatttc 147  Q
    |||||||||||||||||||| |||||||||    
T  32400503 ttatgttagggggtcaaaagcgcatatttc 32400532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 29 - 245
Target Start/End: Original strand, 7117206 - 7117429
Alignment:
Q  29 aaaattgctaagaagatgccatatgtcctagaaaaggggtcataatcgcaactttttgttaagataacgggtcaaaa-aacatatttcccttatgttagg 127  Q
    |||| |||| |||||| |||| |||||| | |||| ||| |||||| |||||||||||| ||||||| |||| |||| |||| ||| ||||| ||||||     
T  7117206 aaaactgctgagaagacgccacatgtcccaaaaaaagggccataattgcaactttttgtaaagataaggggttaaaagaacacattccccttctgttagt 7117305  T
Q  128 gggtcaaaagagcatatttc-----ccagggggtcacttttgccannnnnnnnaatagg-ggccaaaatcgcaaaattttgaaacttaaggggcgaaaag 221  Q
    ||||||||||||||||||||      || ||||||||||||||||        |||||| || |||||||||||  |||||||||||||| || || |||    
T  7117306 gggtcaaaagagcatatttctctaaacatggggtcacttttgccattttttttaataggtggtcaaaatcgcaactttttgaaacttaagtggtgataag 7117405  T
Q  222 tggagtttagcctatattttatat 245  Q
    || ||||||||||| | |||||||    
T  7117406 tgcagtttagcctaaaatttatat 7117429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 26 - 149
Target Start/End: Complemental strand, 3208195 - 3208072
Alignment:
Q  26 cccaaaattgctaagaagatgccatatgtcctagaaaaggggtcataatcgcaactttttgttaagataacgggtcaaaa-aacatatttcccttatgtt 124  Q
    ||||||||| || |||||| ||||  ||||| | |||| |||||||||||||||||||||   ||||||| ||||||||| | |||||||||||||||||    
T  3208195 cccaaaattactgagaagacgccacgtgtcccaaaaaatgggtcataatcgcaactttttaagaagataaggggtcaaaatatcatatttcccttatgtt 3208096  T
Q  125 agggggtcaaaagagcatatttccc 149  Q
    | |||||||||||| ||||||||||    
T  3208095 a-ggggtcaaaagaacatatttccc 3208072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 101 - 235
Target Start/End: Original strand, 21929967 - 21930107
Alignment:
Q  101 caaaaaacatatttcccttatgttagggggtcaaaagagcatatttccc------agggggtcacttttgccannnnnnnnaataggggccaaaatcgca 194  Q
    |||||| |||||||||||||||||||| |||||||||||||||||||||        ||||||||||||||||        |   |||| ||||||||||    
T  21929967 caaaaagcatatttcccttatgttaggaggtcaaaagagcatatttccctaaacataggggtcacttttgccatttttttaatagggggtcaaaatcgca 21930066  T
Q  195 aaattttgaaacttaaggggcgaaaagtggagtttagccta 235  Q
    | |||||||||||||  |||||||||||| |||||||||||    
T  21930067 acattttgaaacttagagggcgaaaagtgaagtttagccta 21930107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 26 - 148
Target Start/End: Original strand, 4423119 - 4423242
Alignment:
Q  26 cccaaaattgctaagaagatgccatatgtcctagaaaaggggtcataatcgcaactttttgttaagataacgggtcaaaa-aacatatttcccttatgtt 124  Q
    |||||||||||| ||||||||||| ||||   | ||||||| |||||||||||| ||||||  ||||||| ||||||||| | |||||||||||||||||    
T  4423119 cccaaaattgctgagaagatgccacatgttaaaaaaaaggg-tcataatcgcaattttttgaaaagataaggggtcaaaagatcatatttcccttatgtt 4423217  T
Q  125 a-gggggtcaaaagagcatatttcc 148  Q
    | || ||| |||||| |||||||||    
T  4423218 atggaggttaaaagaacatatttcc 4423242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 26 - 149
Target Start/End: Original strand, 18252975 - 18253098
Alignment:
Q  26 cccaaaattgctaagaagatgccatatgtcctagaaaaggggtcataatcgcaactttttgttaagataacgggtcaaaaaa-catatttcccttatgtt 124  Q
    |||||||||||| |||||| ||||  ||||| | || || || ||||||| ||||||||||  ||||||| ||||||||||| |||||||||||||||||    
T  18252975 cccaaaattgctgagaagacgccacgtgtcccaaaacagtggccataatcacaactttttgagaagataaggggtcaaaaaatcatatttcccttatgtt 18253074  T
Q  125 agggggtcaaaagagcatatttccc 149  Q
    |  ||||||||| | ||||||||||    
T  18253075 a-tgggtcaaaaaaacatatttccc 18253098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 62 - 149
Target Start/End: Original strand, 18881628 - 18881716
Alignment:
Q  62 aaggggtcataatcgcaactttttgttaagataacgggtcaaaa-aacatatttcccttatgttagggggtcaaaagagcatatttccc 149  Q
    ||||||||||||| |||||||||||| ||||||| ||||||||| | | |||||||||||||||||  | |||||| ||||||||||||    
T  18881628 aaggggtcataattgcaactttttgtaaagataaggggtcaaaagagcgtatttcccttatgttagaagctcaaaatagcatatttccc 18881716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 76 - 146
Target Start/End: Complemental strand, 3380363 - 3380293
Alignment:
Q  76 gcaactttttgttaagataacgggtcaaaaaacatatttcccttatgttagggggtcaaaagagcatattt 146  Q
    ||||||||||||  ||||||  ||||||||||||||||||||||||| ||| ||| |||||||||||||||    
T  3380363 gcaactttttgtagagataagaggtcaaaaaacatatttcccttatgctagagggacaaaagagcatattt 3380293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 18 - 116
Target Start/End: Complemental strand, 23565312 - 23565214
Alignment:
Q  18 cctttcagcccaaaattgctaagaagatgccatatgtcctagaaaaggggtcataatcgcaactttttgttaagataacgggtcaaaaaacatatttcc 116  Q
    ||||||| || ||||||||| |||||| |||| ||||   | |||| ||| ||||||||||||||||||| ||||||| |||||||||| |||||||||    
T  23565312 cctttcatccaaaaattgctgagaagacgccacatgtttaaaaaaaagggccataatcgcaactttttgtaaagataaggggtcaaaaagcatatttcc 23565214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 29 - 149
Target Start/End: Complemental strand, 31268491 - 31268371
Alignment:
Q  29 aaaattgctaagaagatgccatatgtcctagaaaagggg-tcataatcgcaactttttgttaagataacgggtc-aaaaaacatatttcccttatgttag 126  Q
    |||||||||||||||| |||  |||||| | |||||||| |||||||| ||||||||| | ||||||| ||||| ||| | |||| |||||||||||||     
T  31268491 aaaattgctaagaagacgccgcatgtcccaaaaaaggggatcataatcacaactttttataaagataaagggtctaaagagcata-ttcccttatgttat 31268393  T
Q  127 ggggtcaaaagagcatatttccc 149  Q
    |||| ||||||||||||||||||    
T  31268392 gggg-caaaagagcatatttccc 31268371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 180 - 235
Target Start/End: Original strand, 19392817 - 19392872
Alignment:
Q  180 ggggccaaaatcgcaaaattttgaaacttaaggggcgaaaagtggagtttagccta 235  Q
    |||||||||||||||| |||||||||||||  |||||||||||| |||||||||||    
T  19392817 ggggccaaaatcgcaacattttgaaacttagagggcgaaaagtgaagtttagccta 19392872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 65 - 147
Target Start/End: Original strand, 41688238 - 41688321
Alignment:
Q  65 gggtcataatcgcaactttttgttaagataacgggtcaaaa-aacatatttcccttatgttagggggtcaaaagagcatatttc 147  Q
    ||||||||||||||||||||||  ||||||| ||||||||| | || ||||  ||||||||| |||||||||||| ||||||||    
T  41688238 gggtcataatcgcaactttttgagaagataaggggtcaaaatatcagatttttcttatgttaaggggtcaaaagaacatatttc 41688321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 69 - 146
Target Start/End: Original strand, 41385622 - 41385700
Alignment:
Q  69 cataatcgcaactttttgttaagataacgggtcaaaaaa-catatttcccttatgttagggggtcaaaagagcatattt 146  Q
    ||||||| ||||||||||  | ||||| ||||||||||| ||||||||||||||||||| | |||||||||| ||||||    
T  41385622 cataatcacaactttttgagatgataaggggtcaaaaaatcatatttcccttatgttagagagtcaaaagagtatattt 41385700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 180 - 235
Target Start/End: Original strand, 44147221 - 44147276
Alignment:
Q  180 ggggccaaaatcgcaaaattttgaaacttaaggggcgaaaagtggagtttagccta 235  Q
    |||||||||||||||| |||||||||| || ||||||||||||| | |||||||||    
T  44147221 ggggccaaaatcgcaatattttgaaacatatggggcgaaaagtgcactttagccta 44147276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 180 - 234
Target Start/End: Complemental strand, 5192325 - 5192271
Alignment:
Q  180 ggggccaaaatcgcaaaattttgaaacttaaggggcgaaaagtggagtttagcct 234  Q
    ||||||||||| |||| |||||||||| || ||||||||||||| ||||||||||    
T  5192325 ggggccaaaattgcaacattttgaaacatagggggcgaaaagtgaagtttagcct 5192271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 180 - 237
Target Start/End: Complemental strand, 4807653 - 4807596
Alignment:
Q  180 ggggccaaaatcgcaaaattttgaaacttaaggggcgaaaagtggagtttagcctata 237  Q
    ||||||||||| |||| |||||||||| || | ||||||||||| |||||||||||||    
T  4807653 ggggccaaaattgcaacattttgaaacataggaggcgaaaagtgcagtttagcctata 4807596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 183 - 243
Target Start/End: Complemental strand, 7116453 - 7116393
Alignment:
Q  183 gccaaaatcgcaaaattttgaaacttaaggggcgaaaagtggagtttagcctatattttat 243  Q
    ||||||||||||| ||||  ||||||||||||| ||||||  ||||||||||| |||||||    
T  7116453 gccaaaatcgcaacatttcaaaacttaaggggcaaaaagttcagtttagcctaaattttat 7116393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 176 - 235
Target Start/End: Original strand, 15869580 - 15869639
Alignment:
Q  176 aataggggccaaaatcgcaaaattttgaaacttaaggggcgaaaagtggagtttagccta 235  Q
    ||||||||| |||||| ||| ||||||||||||| || || ||||||| |||||||||||    
T  15869580 aataggggctaaaatcacaacattttgaaacttagggagccaaaagtgcagtttagccta 15869639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 180 - 235
Target Start/End: Complemental strand, 18881557 - 18881502
Alignment:
Q  180 ggggccaaaatcgcaaaattttgaaacttaaggggcgaaaagtggagtttagccta 235  Q
    |||||||||||||||| ||||  ||||||||||| ||||||| | |||||||||||    
T  18881557 ggggccaaaatcgcaacatttcaaaacttaagggtcgaaaagcgcagtttagccta 18881502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 176 - 238
Target Start/End: Complemental strand, 19391445 - 19391383
Alignment:
Q  176 aatagggg-ccaaaatcgcaaaattttgaaacttaaggggcgaaaagtggagtttagcctatat 238  Q
    |||||||| ||||||| |||| |||||||||| || ||||||||||||| ||||||||||||||    
T  19391445 aataggggaccaaaattgcaacattttgaaacata-ggggcgaaaagtgcagtttagcctatat 19391383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 180 - 235
Target Start/End: Complemental strand, 23565174 - 23565119
Alignment:
Q  180 ggggccaaaatcgcaaaattttgaaacttaaggggcgaaaagtggagtttagccta 235  Q
    |||| |||||| |||| |||||||||| |||||||||||||||  |||||||||||    
T  23565174 ggggtcaaaattgcaacattttgaaacataaggggcgaaaagtctagtttagccta 23565119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 183 - 233
Target Start/End: Complemental strand, 3380249 - 3380199
Alignment:
Q  183 gccaaaatcgcaaaattttgaaacttaaggggcgaaaagtggagtttagcc 233  Q
    ||||||||||||| |||||||||||||| ||| ||||| || |||||||||    
T  3380249 gccaaaatcgcaacattttgaaacttaaagggtgaaaaatgcagtttagcc 3380199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 176 - 214
Target Start/End: Complemental strand, 3819545 - 3819507
Alignment:
Q  176 aataggggccaaaatcgcaaaattttgaaacttaagggg 214  Q
    ||||||||||||||| |||| ||||||||||||||||||    
T  3819545 aataggggccaaaattgcaacattttgaaacttaagggg 3819507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 108 - 149
Target Start/End: Complemental strand, 1824737 - 1824697
Alignment:
Q  108 catatttcccttatgttagggggtcaaaagagcatatttccc 149  Q
    ||||||| |||||||||||||| |||||||||||||||||||    
T  1824737 catattttccttatgttagggg-tcaaaagagcatatttccc 1824697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 108 - 149
Target Start/End: Complemental strand, 1859182 - 1859142
Alignment:
Q  108 catatttcccttatgttagggggtcaaaagagcatatttccc 149  Q
    ||||||| |||||||||||||| |||||||||||||||||||    
T  1859182 catattttccttatgttagggg-tcaaaagagcatatttccc 1859142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 180 - 237
Target Start/End: Original strand, 10007811 - 10007868
Alignment:
Q  180 ggggccaaaatcgcaaaattttgaaacttaaggggcgaaaagtggagtttagcctata 237  Q
    ||||||||||| ||||  |||||||| |||||||| |||||||| | |||||||||||    
T  10007811 ggggccaaaattgcaagtttttgaaagttaaggggggaaaagtgcactttagcctata 10007868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 186 - 234
Target Start/End: Complemental strand, 21666321 - 21666273
Alignment:
Q  186 aaaatcgcaaaattttgaaacttaaggggcgaaaagtggagtttagcct 234  Q
    |||||| ||| |||| |||||||||||| ||||||||| ||||||||||    
T  21666321 aaaatcacaacatttcgaaacttaagggacgaaaagtgcagtttagcct 21666273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0179 (Bit Score: 87; Significance: 1e-41; HSPs: 2)
Name: scaffold0179
Description:

Target: scaffold0179; HSP #1
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 26 - 234
Target Start/End: Original strand, 5739 - 5954
Alignment:
Q  26 cccaaaattgctaagaagatgccatatgtcctagaaaaggggtcataatcgcaactttttgttaagataacgggtcaaaaaacatatttcccttatgtta 125  Q
    ||||||||||||  ||||| ||||  ||||| | |||||||  ||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||    
T  5739 cccaaaattgctgcgaagacgccacgtgtcccaaaaaagggc-cataatcgcaactttttgtaaagataaggggtcaaaaaacatatttcccttatgtta 5837  T
Q  126 gggggtcaaaagagcatatttccc-------agggggtcacttttgccannnnnnnnaata-ggggccaaaatcgcaaaattttgaaacttaaggggcga 217  Q
    || |||||||||||||||||||||       ||||||||||||||||||        |||| |||||||||||||||| |||||||||||||  || |||    
T  5838 ggaggtcaaaagagcatatttccctaaacatagggggtcacttttgccatttttttaaatagggggccaaaatcgcaatattttgaaacttagaggccga 5937  T
Q  218 aaagtggagtttagcct 234  Q
    |||||| ||||||||||    
T  5938 aaagtgaagtttagcct 5954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0179; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 182 - 236
Target Start/End: Complemental strand, 5701 - 5647
Alignment:
Q  182 ggccaaaatcgcaaaattttgaaacttaaggggcgaaaagtggagtttagcctat 236  Q
    ||||||||| | || |||||||||| || ||||||||||||| ||||||||||||    
T  5701 ggccaaaattgtaacattttgaaacatagggggcgaaaagtgcagtttagcctat 5647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0406 (Bit Score: 82; Significance: 1e-38; HSPs: 1)
Name: scaffold0406
Description:

Target: scaffold0406; HSP #1
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 18 - 233
Target Start/End: Complemental strand, 2214 - 1997
Alignment:
Q  18 cctttcagcccaaaattgctaagaagatgccatatgtcctagaaaaggggtcataatcgcaactttttgttaagataacgggtcaaaaaacatatttccc 117  Q
    ||||||| || ||||||||| |||||| ||||  ||||| | ||||||||  |||||||||||||||||| ||||||  |||||||||| ||| ||||||    
T  2214 cctttcatccaaaaattgctgagaagacgccacgtgtcccaaaaaaggggctataatcgcaactttttgtaaagatatggggtcaaaaagcatgtttccc 2115  T
Q  118 ttatgttagggggtcaaaagagcatatttccc-agggggtcacttttgccannnnnnnnaata-ggggccaaaatcgcaaaattttgaaacttaaggggc 215  Q
    |||||||||| ||||||||||||||||||||| | ||||||||||||||||        |||| |||| ||||||||||| ||||| |||||||  ||||    
T  2114 ttatgttaggaggtcaaaagagcatatttccctaaggggtcacttttgccattttttttaatagggggtcaaaatcgcaacattttaaaacttagagggc 2015  T
Q  216 gaaaagtggagtttagcc 233  Q
    |||||||  |||||||||    
T  2014 gaaaagtaaagtttagcc 1997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0607 (Bit Score: 81; Significance: 4e-38; HSPs: 2)
Name: scaffold0607
Description:

Target: scaffold0607; HSP #1
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 18 - 237
Target Start/End: Original strand, 2130 - 2355
Alignment:
Q  18 cctttcagcccaaaattgctaagaagatgccatatgtcctagaaaaggggtcataatcgcaactttttgttaagataacgggtcaaaaaacatatttccc 117  Q
    ||||||| || ||||||||| |||||| ||||  ||||| | |||||||||||||||||||||||||||| ||||||| |||||||||| |||||| |||    
T  2130 cctttcatccaaaaattgctgagaagacgccacgtgtcccaaaaaaggggtcataatcgcaactttttgtaaagataaggggtcaaaaagcatattgccc 2229  T
Q  118 ttatgttagggggtcaaaagagcatatttccc-------agggggtcacttttgccannnnnnnnaataggggccaaaatcgcaaaattttgaaacttaa 210  Q
    |||||||||| |||||||||||||||||||||       ||||||||||||||||||        |   |||||||||||||| || |||| |||||||     
T  2230 ttatgttaggaggtcaaaagagcatatttccctaaacatagggggtcacttttgccatttttttaatagggggccaaaatcgc-aacttttaaaacttag 2328  T
Q  211 ggggcgaaaagtggagtttagcctata 237  Q
      ||||||||||||| |||||||||||    
T  2329 aaggcgaaaagtggactttagcctata 2355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0607; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 180 - 234
Target Start/End: Complemental strand, 2101 - 2047
Alignment:
Q  180 ggggccaaaatcgcaaaattttgaaacttaaggggcgaaaagtggagtttagcct 234  Q
    ||||||||||| |||| ||||| |||| || ||||||||||||| ||||||||||    
T  2101 ggggccaaaattgcaacattttaaaacatagggggcgaaaagtgcagtttagcct 2047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0267 (Bit Score: 77; Significance: 1e-35; HSPs: 1)
Name: scaffold0267
Description:

Target: scaffold0267; HSP #1
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 19 - 231
Target Start/End: Original strand, 3650 - 3866
Alignment:
Q  19 ctttcagcccaaaattgctaagaagatgccatatgtcctagaaaaggggtcataatcgcaactttttgttaagataacgggtcaaaaaacatatttccct 118  Q
    |||||| |||||||||||| ||||||  ||   ||||| | ||||||||  ||||||| |||||||||| ||||||| |||||||||| |||||||||||    
T  3650 ctttcatcccaaaattgctgagaagacacctcgtgtcccaaaaaaggggctataatcgaaactttttgtaaagataaggggtcaaaaagcatatttccct 3749  T
Q  119 tatgttagggggtcaaaagagcatatttcc-----cagggggtcacttttgccannnnnnnnaataggggccaaaatcgcaaaattttgaaacttaaggg 213  Q
    ||||||||||||||||||||||||||||||     || ||||||||||||||||        |||||||| ||||||| ||| ||||||||||||| ||     
T  3750 tatgttagggggtcaaaagagcatatttccctaaacatggggtcacttttgcca-tttttttaataggggtcaaaatcacaatattttgaaacttatgga 3848  T
Q  214 gcgaaaagtggagtttag 231  Q
    || ||||||| |||||||    
T  3849 gcaaaaagtgcagtttag 3866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025 (Bit Score: 77; Significance: 1e-35; HSPs: 3)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 20 - 233
Target Start/End: Complemental strand, 19503 - 19285
Alignment:
Q  20 tttcagcccaaaattgctaagaagatgccatatgtcctagaaaaggggtcataatcgcaactttttgttaagataacgggtcaaaaaacatatttccctt 119  Q
    ||||| || ||||||||| |||||| ||||  ||||| | |||||||| ||||||||||||||||||| ||||||| |||||||||| ||||||||||||    
T  19503 tttcatccaaaaattgctgagaagacgccacgtgtcccaaaaaaggggccataatcgcaactttttgtaaagataaggggtcaaaaagcatatttccctt 19404  T
Q  120 atgttagggggtcaaaagagcatatttccc------agggggtcacttttgccannnnnnnnaataggggccaaaatcgcaaaattttgaaacttaaggg 213  Q
    |||||| |||||||||||||||||||||||        ||||||||||||||||        |   |||| ||||||||||| ||||||||||||| | |    
T  19403 atgtta-ggggtcaaaagagcatatttccctaaacataggggtcacttttgccatttttttaatagggggtcaaaatcgcaacattttgaaacttaggag 19305  T
Q  214 gcgaaaagtggagtttagcc 233  Q
    ||||||||| ||||||||||    
T  19304 gcgaaaagtagagtttagcc 19285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025; HSP #2
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 60 - 234
Target Start/End: Complemental strand, 61995 - 61813
Alignment:
Q  60 aaaaggggtcataatcgcaactttttgttaagataacgggtcaaaaaacatatttcccttatgttagggggtcaaaagagcatatttccc-------agg 152  Q
    |||||||| |||||| |||||||||||| ||||||| |||||||||| ||||||||||||||||||||  ||||||||||||||||||||       |||    
T  61995 aaaaggggccataattgcaactttttgtaaagataaggggtcaaaaagcatatttcccttatgttaggatgtcaaaagagcatatttccctaaacatagg 61896  T
Q  153 gggtcacttttgccannnnnnnnaata-ggggccaaaatcgcaaaattttgaaacttaaggggcgaaaagtggagtttagcct 234  Q
    |||||||||||||||        |||| |||||||||||||||| |||||||||||||   ||||||||||| ||||||||||    
T  61895 gggtcacttttgccattttttttaatagggggccaaaatcgcaacattttgaaacttagaaggcgaaaagtgaagtttagcct 61813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025; HSP #3
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 180 - 233
Target Start/End: Original strand, 19532 - 19585
Alignment:
Q  180 ggggccaaaatcgcaaaattttgaaacttaaggggcgaaaagtggagtttagcc 233  Q
    ||||||||||||| || | |||||||||||||||||||||| || |||||||||    
T  19532 ggggccaaaatcgaaacagtttgaaacttaaggggcgaaaaatgcagtttagcc 19585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1202 (Bit Score: 76; Significance: 4e-35; HSPs: 1)
Name: scaffold1202
Description:

Target: scaffold1202; HSP #1
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 65 - 235
Target Start/End: Original strand, 1902 - 2079
Alignment:
Q  65 gggtcataatcgcaactttttgttaagataacgggtcaaaaaacatatttcccttatgttagggggtcaaaagagcatatttccc-------agggggtc 157  Q
    ||||||||||||||||||||||| ||||||| |||||||||| ||||||||||||||||||||||||||||| ||||||||||||       ||||||||    
T  1902 gggtcataatcgcaactttttgtaaagataaggggtcaaaaagcatatttcccttatgttagggggtcaaaatagcatatttccctaaacatagggggtc 2001  T
Q  158 acttttgccannnnnnnnaataggggccaaaatcgcaaaattttgaaacttaaggggcgaaaagtggagtttagccta 235  Q
    ||||||||||        || ||||  ||||||||||| |||||||||||||  ||| |||||||| |||||| ||||    
T  2002 acttttgccattttttttaaaagggatcaaaatcgcaacattttgaaacttagagggtgaaaagtgaagtttaaccta 2079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0087 (Bit Score: 72; Significance: 9e-33; HSPs: 1)
Name: scaffold0087
Description:

Target: scaffold0087; HSP #1
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 18 - 149
Target Start/End: Original strand, 25045 - 25176
Alignment:
Q  18 cctttcagcccaaaattgctaagaagatgccatatgtcctagaaaaggggtcataatcgcaactttttgttaagataacgggtcaaaaaacatatttccc 117  Q
    |||||||  ||||||||||| |||||| ||||  ||||| | |||||||| ||||||| ||||||||  | ||||||| |||||||||| ||||||||||    
T  25045 cctttcataccaaaattgctgagaagacgccacgtgtcccaaaaaaggggccataatcacaacttttgttaaagataaggggtcaaaaagcatatttccc 25144  T
Q  118 ttatgttagggggtcaaaagagcatatttccc 149  Q
    ||||||||||||||||||||||||||||||||    
T  25145 ttatgttagggggtcaaaagagcatatttccc 25176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0419 (Bit Score: 71; Significance: 4e-32; HSPs: 2)
Name: scaffold0419
Description:

Target: scaffold0419; HSP #1
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 21 - 233
Target Start/End: Original strand, 3044 - 3264
Alignment:
Q  21 ttcagcccaaaattgctaagaagatgccatatgtcctagaaaaggggtcataatcgcaactttttgttaagataacgggtcaaaaaacatatttccctta 120  Q
    |||| |||||||||| | |||||| ||||  ||||| | ||||| || |||||| |||||||||||| |||||||  |||||||||||||||||||||||    
T  3044 ttcatcccaaaattgatgagaagacgccacgtgtcccaaaaaagaggccataattgcaactttttgtaaagataagaggtcaaaaaacatatttccctta 3143  T
Q  121 tgttagggggtcaaaagagcatatttccc-------agggggtcacttttgccannnnnnnnaata-ggggccaaaatcgcaaaattttgaaacttaagg 212  Q
    ||||||| |||||||||||||||||||||       ||| ||||||||||||||        |||| |||| |||||| |||| |||||||||||||  |    
T  3144 tgttaggaggtcaaaagagcatatttccctaaacataggaggtcacttttgccattttttttaatagggggtcaaaattgcaacattttgaaacttagag 3243  T
Q  213 ggcgaaaagtggagtttagcc 233  Q
    |||||||||||  ||||||||    
T  3244 ggcgaaaagtgaggtttagcc 3264  T

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Target: scaffold0419; HSP #2
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 180 - 233
Target Start/End: Complemental strand, 3014 - 2961
Alignment:
Q  180 ggggccaaaatcgcaaaattttgaaacttaaggggcgaaaagtggagtttagcc 233  Q
    |||||||||||||||| |||||||||| || ||||||||||||| | |||||||    
T  3014 ggggccaaaatcgcaacattttgaaacatagggggcgaaaagtgcactttagcc 2961  T

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Target: scaffold0001 (Bit Score: 71; Significance: 4e-32; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 29 - 235
Target Start/End: Original strand, 142039 - 142252
Alignment:
Q  29 aaaattgctaagaagatgccatatgtcctagaaaaggggtcataatcgcaactttttgttaagataacgggtcaaaaaacatatttcccttatgttaggg 128  Q
    ||||||||| |||||| ||||  ||||| | |||| ||| ||||||||||||||||||| |||||||  ||||||||| ||||||||||||||||||||     
T  142039 aaaattgcttagaagacgccacgtgtcccaaaaaatgggccataatcgcaactttttgtaaagataagaggtcaaaaagcatatttcccttatgttagga 142138  T
Q  129 ggtcaaaagagcatatttccc------agggggtcacttttgccannnnnnnnaatagggg-ccaaaatcgcaaaattttgaaacttaaggggcgaaaag 221  Q
    |||||||||||||||||||||        ||||||||||||||||        |||||||| ||||||| |||| ||||| |||||||  ||||||||||    
T  142139 ggtcaaaagagcatatttccctaaacataggggtcacttttgccattttttttaataggggaccaaaattgcaacattttaaaacttagagggcgaaaag 142238  T
Q  222 tggagtttagccta 235  Q
    || |||||| ||||    
T  142239 tgaagtttaaccta 142252  T

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Target: scaffold0060 (Bit Score: 68; Significance: 2e-30; HSPs: 2)
Name: scaffold0060
Description:

Target: scaffold0060; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 18 - 149
Target Start/End: Complemental strand, 66397 - 66266
Alignment:
Q  18 cctttcagcccaaaattgctaagaagatgccatatgtcctagaaaaggggtcataatcgcaactttttgttaagataacgggtcaaaaaacatatttccc 117  Q
    ||||||| || |||||| || |||||| ||||  ||| | | |||||||||||||||||||||||||||| ||||||| |||||||||| |||| |||||    
T  66397 cctttcatccaaaaatttctgagaagacgccacgtgttcaaaaaaaggggtcataatcgcaactttttgtaaagataaggggtcaaaaagcatagttccc 66298  T
Q  118 ttatgttagggggtcaaaagagcatatttccc 149  Q
    |||||||||| |||||||| ||||||||||||    
T  66297 ttatgttaggaggtcaaaatagcatatttccc 66266  T

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Target: scaffold0060; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 176 - 234
Target Start/End: Original strand, 66420 - 66478
Alignment:
Q  176 aataggggccaaaatcgcaaaattttgaaacttaaggggcgaaaagtggagtttagcct 234  Q
    |||||||||||||||  ||| |||||||||| || ||||||||||||| ||||||||||    
T  66420 aataggggccaaaattacaacattttgaaacatagggggcgaaaagtgcagtttagcct 66478  T

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Target: scaffold0150 (Bit Score: 66; Significance: 4e-29; HSPs: 1)
Name: scaffold0150
Description:

Target: scaffold0150; HSP #1
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 21 - 149
Target Start/End: Complemental strand, 6051 - 5923
Alignment:
Q  21 ttcagcccaaaattgctaagaagatgccatatgtcctagaaaaggggtcataatcgcaactttttgttaagataacgggtcaaaaaacatatttccctta 120  Q
    |||| |||||||||||| |||||||||||  ||||| | |||| || |||||||||||||||||| | ||||||| |||||||||| |||||||||||||    
T  6051 ttcatcccaaaattgctgagaagatgccacgtgtcccaaaaaaagg-tcataatcgcaactttttataaagataaggggtcaaaaagcatatttccctta 5953  T
Q  121 tgttag-ggggtcaaaagagcatatttccc 149  Q
    |||||| |||||||||| ||||||||||||    
T  5952 tgttaggggggtcaaaatagcatatttccc 5923  T

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Target: scaffold0002 (Bit Score: 66; Significance: 4e-29; HSPs: 3)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 18 - 146
Target Start/End: Complemental strand, 455250 - 455121
Alignment:
Q  18 cctttcagcccaaaattgctaagaagatgccatatgtcctagaaaaggggtcataatcgcaactttttgttaagataacgggtcaaaa-aacatatttcc 116  Q
    ||||||| |||||||||||| |||||| |||| |||||| | |||| |||||||||||||||||||| |  ||||||| ||||||||| | |||||||||    
T  455250 cctttcatcccaaaattgctgagaagacgccacatgtcccaaaaaatgggtcataatcgcaacttttagagaagataaggggtcaaaagatcatatttcc 455151  T
Q  117 cttatgttagggggtcaaaagagcatattt 146  Q
    ||||||||||||||| |||||| |||||||    
T  455150 cttatgttagggggttaaaagaacatattt 455121  T

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Target: scaffold0002; HSP #2
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 64 - 149
Target Start/End: Complemental strand, 455108 - 455022
Alignment:
Q  64 ggggtcataatcgcaactttttgttaagataacgggtcaaaaaa-catatttcccttatgttagggggtcaaaagagcatatttccc 149  Q
    ||||||||||||  ||||||| |  ||||||| ||||||||| | | ||||||| |||||||||||||| |||||||||||||||||    
T  455108 ggggtcataatcaaaacttttagagaagataaggggtcaaaagatcgtatttcctttatgttagggggttaaaagagcatatttccc 455022  T

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Target: scaffold0002; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 180 - 232
Target Start/End: Original strand, 455279 - 455331
Alignment:
Q  180 ggggccaaaatcgcaaaattttgaaacttaaggggcgaaaagtggagtttagc 232  Q
    |||||||||||||||| ||||||||||||| ||  ||||||||| ||||||||    
T  455279 ggggccaaaatcgcaacattttgaaacttagggttcgaaaagtgcagtttagc 455331  T

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Target: scaffold1875 (Bit Score: 53; Significance: 2e-21; HSPs: 2)
Name: scaffold1875
Description:

Target: scaffold1875; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 26 - 149
Target Start/End: Original strand, 845 - 969
Alignment:
Q  26 cccaaaattgctaagaagatgccatatgtcctagaaaaggggtcataatcgcaactttttgttaagataacgggtcaaaa-aacatatttcccttatgtt 124  Q
    |||||||||| | |||||| |||| |||||| | | ||||||||||||| |||||||||||| ||||||| ||||||||| | ||||||| |||||||||    
T  845 cccaaaattgttgagaagacgccagatgtcccaaataaggggtcataattgcaactttttgtaaagataaggggtcaaaagagcatatttaccttatgtt 944  T
Q  125 agggggtcaaaagagcatatttccc 149  Q
    ||  |||||||| ||||||| ||||    
T  945 agaaggtcaaaatagcatatatccc 969  T

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Target: scaffold1875; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 180 - 235
Target Start/End: Complemental strand, 809 - 754
Alignment:
Q  180 ggggccaaaatcgcaaaattttgaaacttaaggggcgaaaagtggagtttagccta 235  Q
    |||||||||||||||| |||| ||||||||||||| |||||||| |||||||||||    
T  809 ggggccaaaatcgcaacatttcgaaacttaaggggtgaaaagtgcagtttagccta 754  T

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Target: scaffold0007 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 29 - 122
Target Start/End: Original strand, 250610 - 250703
Alignment:
Q  29 aaaattgctaagaagatgccatatgtcctagaaaaggggtcataatcgcaactttttgttaagataacgggtcaaaaaacatatttcccttatg 122  Q
    ||||||||| |||||| ||||  || || | |||||||| ||||||| ||||||||||| ||||||| ||||||||||||||||||||||||||    
T  250610 aaaattgctgagaagacgccacgtgccccaaaaaaggggccataatcacaactttttgtaaagataaggggtcaaaaaacatatttcccttatg 250703  T

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Target: scaffold0291 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0291
Description:

Target: scaffold0291; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 26 - 149
Target Start/End: Complemental strand, 10136 - 10013
Alignment:
Q  26 cccaaaattgctaagaagatgccatatgtcctagaaaaggggtcataatcgcaactttttgttaagataacgggtc-aaaaaacatatttcccttatgtt 124  Q
    |||||||||| | |||||| |||| |||||  | ||||||||  |||||||||||||||||  ||||||| ||||| ||| | ||||||| |||||||||    
T  10136 cccaaaattgttgagaagacgccacatgtcacaaaaaaggggaaataatcgcaactttttgagaagataaggggtctaaagatcatattttccttatgtt 10037  T
Q  125 agggggtcaaaagagcatatttccc 149  Q
    |  ||||||||||||||||||||||    
T  10036 a-tgggtcaaaagagcatatttccc 10013  T

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Target: scaffold0103 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0103
Description:

Target: scaffold0103; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 54 - 129
Target Start/End: Original strand, 3045 - 3121
Alignment:
Q  54 tcctagaaaaggggtcataatcgcaactttttgttaagataacgggtcaaaa-aacatatttcccttatgttagggg 129  Q
    ||||||||| |||||||||||||||||||||||| || |||| ||||||||| | ||||||| ||||||||||||||    
T  3045 tcctagaaagggggtcataatcgcaactttttgtaaaaataaggggtcaaaatagcatatttaccttatgttagggg 3121  T

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Target: scaffold0174 (Bit Score: 42; Significance: 0.000000000000007; HSPs: 2)
Name: scaffold0174
Description:

Target: scaffold0174; HSP #1
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 69 - 149
Target Start/End: Complemental strand, 29888 - 29808
Alignment:
Q  69 cataatcgcaactttttgttaagataacgggtcaaaaaa-catatttcccttatgttagggggtcaaaagagcatatttccc 149  Q
    |||||| |||||||||||  ||||||| ||||||||| | |||||||||||||||||| |||||| ||||||||||||||||    
T  29888 cataattgcaactttttgagaagataaggggtcaaaagatcatatttcccttatgtta-ggggtccaaagagcatatttccc 29808  T

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Target: scaffold0174; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 179 - 233
Target Start/End: Original strand, 29937 - 29991
Alignment:
Q  179 aggggccaaaatcgcaaaattttgaaacttaaggggcgaaaagtggagtttagcc 233  Q
    |||||||||||| |||| ||||| ||||||||||| | ||||||| |||||||||    
T  29937 aggggccaaaattgcaacattttaaaacttaagggacaaaaagtgtagtttagcc 29991  T

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Target: scaffold0014 (Bit Score: 42; Significance: 0.000000000000007; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 29 - 149
Target Start/End: Complemental strand, 112339 - 112218
Alignment:
Q  29 aaaattgctaagaagatgccatatgtcctagaaaaggggtcataatcgcaactttttgttaagataacgggtcaaaaaa-catatttcccttatgttagg 127  Q
    ||||||||  |||||| |||| |||||| | |||| ||  ||||| ||||||||||||  ||||||| | ||||||| | ||||||||||||||||||||    
T  112339 aaaattgcagagaagacgccacatgtcccaaaaaatggaccataaccgcaactttttgagaagataaggagtcaaaagatcatatttcccttatgttagg 112240  T
Q  128 gggtcaaaagagcatatttccc 149  Q
     ||||||||  |||||||||||    
T  112239 aggtcaaaaaggcatatttccc 112218  T

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Target: scaffold0171 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0171
Description:

Target: scaffold0171; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 26 - 105
Target Start/End: Complemental strand, 9248 - 9168
Alignment:
Q  26 cccaaaattgctaagaagatgccatatgtcctagaaaagggg-tcataatcgcaactttttgttaagataacgggtcaaaa 105  Q
    |||||||||||| |||||| | ||  ||||| | |||||||| |||||||||||||||||||  ||||||| |||||||||    
T  9248 cccaaaattgcttagaagacgtcacgtgtcccaaaaaagggggtcataatcgcaactttttgaaaagataatgggtcaaaa 9168  T

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Target: scaffold0683 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0683
Description:

Target: scaffold0683; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 180 - 235
Target Start/End: Complemental strand, 5343 - 5288
Alignment:
Q  180 ggggccaaaatcgcaaaattttgaaacttaaggggcgaaaagtggagtttagccta 235  Q
    ||||||||||| |||| |||||||||| ||| |||||| ||||| |||||||||||    
T  5343 ggggccaaaattgcaacattttgaaacataaagggcgagaagtgtagtttagccta 5288  T

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Target: scaffold0064 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0064
Description:

Target: scaffold0064; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 60 - 118
Target Start/End: Complemental strand, 54551 - 54492
Alignment:
Q  60 aaaaggggtcataatcgcaactttttgttaagataacgggtcaaaa-aacatatttccct 118  Q
    |||||||| ||||||||||||||||||| ||||||| ||| ||||| | |||||||||||    
T  54551 aaaaggggccataatcgcaactttttgtaaagataaggggccaaaagagcatatttccct 54492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 32; Significance: 0.000000007; HSPs: 2)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 28 - 146
Target Start/End: Original strand, 43915 - 44033
Alignment:
Q  28 caaaattgctaagaagatgccatatgtcctagaaaaggggtcataatcgcaactttttgttaagataacgggtcaaaa-aacatatttcccttatgttag 126  Q
    |||||||||| |||||| ||||  ||||| | || ||||  |||| |||||||||||||  |||||||  |||||||| | ||||||||||||  ||||     
T  43915 caaaattgctgagaagacgccacgtgtcccaaaacagggaccatagtcgcaactttttgagaagataaaaggtcaaaagatcatatttccctttcgtta- 44013  T
Q  127 ggggtcaaaagagcatattt 146  Q
    |||||||||| |||||||||    
T  44014 ggggtcaaaaaagcatattt 44033  T

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Target: scaffold0024; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 180 - 242
Target Start/End: Complemental strand, 43877 - 43815
Alignment:
Q  180 ggggccaaaatcgcaaaattttgaaacttaaggggcgaaaagtggagtttagcctatatttta 242  Q
    ||||||||||| | || ||||||||||||| | ||||||||||| |||||| ||| |||||||    
T  43877 ggggccaaaattgaaacattttgaaacttaggaggcgaaaagtgcagtttaacctttatttta 43815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0474 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0474
Description:

Target: scaffold0474; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 26 - 86
Target Start/End: Original strand, 8069 - 8129
Alignment:
Q  26 cccaaaattgctaagaagatgccatatgtcctagaaaaggggtcataatcgcaactttttg 86  Q
    |||||||||||| |||||||||||  ||||| | || ||||| ||||||||||| ||||||    
T  8069 cccaaaattgctgagaagatgccacgtgtcccaaaacaggggccataatcgcaaatttttg 8129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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