View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF3318_high_13 (Length: 211)
Name: NF3318_high_13
Description: NF3318
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3318_high_13 |
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Alignment Details
Target: chr3 (Bit Score: 151; Significance: 4e-80; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 151; E-Value: 4e-80
Query Start/End: Original strand, 1 - 191
Target Start/End: Complemental strand, 51461474 - 51461285
Alignment:
| Q |
1 |
caacatagtgaaaagtgattaataatccagcattttatgcagacagttaaagaagaaaaacaatgatttatatattaatcatatatgtacccttgaaata |
100 |
Q |
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| T |
51461474 |
caacatagtgaaaagtgattaataatccaacattttatgcagacagttaaagaagaaaaacaatgatttatatattaatcatatatgtacccttg-atta |
51461376 |
T |
|
| Q |
101 |
agttaatgcgagcaactgaaacatcaaagagaattagagcatcatgtacacttaaaacgaacatcatcctacgcaacaatattgcctttcc |
191 |
Q |
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|||||||| ||||||||||||||||||||||||| | |||||||||||||||||||||||||| ||||||||| |||||||||| |||||| |
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| T |
51461375 |
agttaatgtgagcaactgaaacatcaaagagaatcaaagcatcatgtacacttaaaacgaacaccatcctacggaacaatattgactttcc |
51461285 |
T |
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