View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF3319_high_12 (Length: 307)

Name: NF3319_high_12
Description: NF3319
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF3319_high_12
NF3319_high_12
[»] chr6 (18 HSPs)
chr6 (12-298)||(3172999-3173285)
chr6 (67-275)||(4489066-4489274)
chr6 (20-283)||(4575461-4575722)
chr6 (67-283)||(4561713-4561929)
chr6 (67-284)||(4503153-4503370)
chr6 (30-273)||(4481880-4482122)
chr6 (68-284)||(4623359-4623575)
chr6 (149-284)||(4471050-4471185)
chr6 (123-284)||(4298358-4298519)
chr6 (35-244)||(4462230-4462438)
chr6 (149-284)||(4627283-4627418)
chr6 (161-247)||(4265954-4266040)
chr6 (161-289)||(4513837-4513965)
chr6 (223-289)||(4581221-4581287)
chr6 (157-284)||(4259036-4259163)
chr6 (69-111)||(4470970-4471012)
chr6 (224-282)||(4586840-4586898)
chr6 (155-232)||(4255551-4255628)
[»] chr8 (1 HSPs)
chr8 (155-289)||(20862659-20862793)
[»] scaffold0288 (1 HSPs)
scaffold0288 (124-295)||(2303-2474)
[»] scaffold0477 (1 HSPs)
scaffold0477 (149-283)||(3383-3517)
[»] scaffold0475 (1 HSPs)
scaffold0475 (196-295)||(2001-2100)


Alignment Details
Target: chr6 (Bit Score: 243; Significance: 1e-135; HSPs: 18)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 243; E-Value: 1e-135
Query Start/End: Original strand, 12 - 298
Target Start/End: Original strand, 3172999 - 3173285
Alignment:
Q  12 gcacagacacatacatacacacatctctttggaagaaaaagggattataaatgatattacctttgagtggcagtaaaccattctgaaacagtttaggaat 111  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||| |||||||||    
T  3172999 gcacacacacatacatacacacatctctttggaagaaaaagggattataaatgatattacctttgagtggtagtagaccattctgaaacaatttaggaat 3173098  T
Q  112 atgaaaaccagccaagaagaaacaagcactacatggcgaaaatagaacaattgggagtgaatgttcttcagcaacatctactgtaaatggcatatagcaa 211  Q
    |||||||||||||||||||||||| |||||||| ||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||    
T  3173099 atgaaaaccagccaagaagaaacatgcactacacggcgaaaatagaacaattgggagagcatgttcttcagcaacatctactgtaaatggcatatagcaa 3173198  T
Q  212 tcggaaacaaagcaagtaactggaggtataagaccagaagttgcagaatcatgaagtttagcaaaaagttcacgaaaaaagtgatga 298  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||| |||||    
T  3173199 tcggaaacaaagcaagtaactggaggtataagaccagcagttgcagaatcgtgaagtttagcaaaaagttcacgaaaaaagcgatga 3173285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 67 - 275
Target Start/End: Complemental strand, 4489274 - 4489066
Alignment:
Q  67 attacctttgagtggcagtaaaccattctgaaacagtttaggaatatgaaaaccagccaagaagaaacaagcactacatggcgaaaatagaacaattggg 166  Q
    ||||||||||||||| || | |||||||||||||| ||||| ||| ||||||  ||   ||||| || | ||||||||||| ||||| ||||||||||||    
T  4489274 attacctttgagtggtagcacaccattctgaaacaatttagtaatgtgaaaagtagagtagaagtaagatgcactacatggggaaaagagaacaattggg 4489175  T
Q  167 agtgaatgttcttcagcaacatctactgtaaatggcatatagcaatcggaaacaaagcaagtaactggaggtataagaccagaagttgcagaatcatgaa 266  Q
    |||| ||||||||||||| ||||||||||||||| ||||| |||||| ||||| ||||||||||||||||| |||||||||| ||| ||||| |||| ||    
T  4489174 agtgcatgttcttcagcagcatctactgtaaatgccatattgcaatcagaaactaagcaagtaactggagggataagaccagcagtagcagagtcattaa 4489075  T
Q  267 gtttagcaa 275  Q
    |||||||||    
T  4489074 gtttagcaa 4489066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 20 - 283
Target Start/End: Original strand, 4575461 - 4575722
Alignment:
Q  20 acatacatacacacatctctttggaagaaaaagggattataaatgatattacctttgagtggcagtaaaccattctgaaacagtttaggaatatgaaaac 119  Q
    ||||||| ||||| |||||||  |||||||||||||  | |||||||  ||||||||| ||| | |  || |||| || ||| ||||||| |  | ||||    
T  4575461 acatacacacacagatctcttaagaagaaaaagggaacaaaaatgat--tacctttgaatggtacttgactattcagatacattttaggactgagcaaac 4575558  T
Q  120 cagccaagaagaaacaagcactacatggcgaaaatagaacaattgggagtgaatgttcttcagcaacatctactgtaaatggcatatagcaatcggaaac 219  Q
     || ||||||  |||| ||||||||||| ||||| |||||||||||||| | ||||||||||||| ||||||||||||||||||| |||||||| |||||    
T  4575559 aagacaagaaataacatgcactacatggggaaaaaagaacaattgggagggcatgttcttcagcagcatctactgtaaatggcatgtagcaatcagaaac 4575658  T
Q  220 aaagcaagtaactggaggtataagaccagaagttgcagaatcatgaagtttagcaaaaagttca 283  Q
     |||||||| ||||| || |||||||||| ||| ||||| || ||||||||||||| |||||||    
T  4575659 taagcaagtgactggggggataagaccagcagtggcagagtcttgaagtttagcaagaagttca 4575722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 67 - 283
Target Start/End: Original strand, 4561713 - 4561929
Alignment:
Q  67 attacctttgagtggcagtaaaccattctgaaacagtttaggaatatgaaaaccagccaagaagaaacaagcactacatggcgaaaatagaacaattggg 166  Q
    ||||||||||| ||| |||  || ||||||| ||| ||||||| |  | |||| |||||||||  |||| || |||| ||| ||||| ||||||| ||||    
T  4561713 attacctttgaatggtagttgactattctgatacattttaggactgagcaaacaagccaagaaataacatgctctacttggggaaaaaagaacaactggg 4561812  T
Q  167 agtgaatgttcttcagcaacatctactgtaaatggcatatagcaatcggaaacaaagcaagtaactggaggtataagaccagaagttgcagaatcatgaa 266  Q
    |||| ||||||||||||| || |||||||||||||||| |||||||| ||||| |||||||| ||||| || |||||||||| ||| ||||| || ||||    
T  4561813 agtgcatgttcttcagcagcagctactgtaaatggcatgtagcaatcagaaactaagcaagtgactggggggataagaccagcagtggcagagtcttgaa 4561912  T
Q  267 gtttagcaaaaagttca 283  Q
    ||||||||| |||||||    
T  4561913 gtttagcaagaagttca 4561929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 67 - 284
Target Start/End: Complemental strand, 4503370 - 4503153
Alignment:
Q  67 attacctttgagtggcagtaaaccattctgaaacagtttaggaatatgaaaaccagccaagaagaaacaagcactacatggcgaaaatagaacaattggg 166  Q
    ||||||||||||||| || | || ||| ||||||| ||||| ||| ||||||  ||   ||||| || | ||||||||||| ||||  ||||||||||||    
T  4503370 attacctttgagtggtagcatactattgtgaaacaatttagcaatgtgaaaagtagagtagaagtaagatgcactacatggggaaacgagaacaattggg 4503271  T
Q  167 agtgaatgttcttcagcaacatctactgtaaatggcatatagcaatcggaaacaaagcaagtaactggaggtataagaccagaagttgcagaatcatgaa 266  Q
    |||| ||||||||||||| ||| ||||| ||||||||| | |||||| ||||| ||||||||||||||||| |||||||||| ||| ||||| |||| ||    
T  4503270 agtgtatgttcttcagcagcatatactggaaatggcatgttgcaatcagaaactaagcaagtaactggagggataagaccagcagtggcagagtcattaa 4503171  T
Q  267 gtttagcaaaaagttcac 284  Q
    ||||| ||| || |||||    
T  4503170 gtttaacaagaaattcac 4503153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 30 - 273
Target Start/End: Original strand, 4481880 - 4482122
Alignment:
Q  30 acacatctctttggaagaaaaagggattataaatgatattacctttgagtggcagtaaaccattctgaaacagtttaggaatatgaaaaccagccaagaa 129  Q
    ||||||||||| | ||||||||| ||  ||||||||||| |||||||||||| || | |||||||||||||| |||||||||   | ||  ||  |  ||    
T  4481880 acacatctcttagaaagaaaaagagaacataaatgatat-acctttgagtggtagcacaccattctgaaacaatttaggaatcaaagaagtagagagtaa 4481978  T
Q  130 gaaacaagcactacatggcgaaaatagaacaattgggagtgaatgttcttcagcaacatctactgtaaatggcatatagcaatcggaaacaaagcaagta 229  Q
    | |||| |||||    || ||||| |||||||||||||||| ||||||||| ||| ||||||||||||||||||| |||||||| ||||| ||||||||     
T  4481979 gtaacatgcactgaccggggaaaagagaacaattgggagtgcatgttcttcggcagcatctactgtaaatggcatgtagcaatcagaaactaagcaagtg 4482078  T
Q  230 actggaggtataagaccagaagttgcagaatcatgaagtttagc 273  Q
    ||||| || |||| ||||| ||| ||||| ||||||||||||||    
T  4482079 actggggggataataccagcagtggcagattcatgaagtttagc 4482122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 68 - 284
Target Start/End: Original strand, 4623359 - 4623575
Alignment:
Q  68 ttacctttgagtggcagtaaaccattctgaaacagtttaggaatatgaaaaccagccaagaagaaacaagcactacatggcgaaaatagaacaattggga 167  Q
    |||||||||||||| | || ||| |||| ||||||| || |||  || ||| ||| |||||||  ||  ||||||  ||| || || | |||||||||||    
T  4623359 ttacctttgagtggtattagacctttctcaaacagtgtatgaaagtgtaaaacagacaagaaggtacttgcactagctggggagaagaaaacaattggga 4623458  T
Q  168 gtgaatgttcttcagcaacatctactgtaaatggcatatagcaatcggaaacaaagcaagtaactggaggtataagaccagaagttgcagaatcatgaag 267  Q
    ||| ||| ||||||||| | | || |||||||| ||| || ||||||||||| |||||||||||||| || | |||||||| ||| ||||| ||||||||    
T  4623459 gtgcatgctcttcagcagcttgtattgtaaatgacatgtaacaatcggaaactaagcaagtaactggtggaacaagaccagcagtggcagagtcatgaag 4623558  T
Q  268 tttagcaaaaagttcac 284  Q
    ||| |||| ||||||||    
T  4623559 ttttgcaagaagttcac 4623575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 149 - 284
Target Start/End: Original strand, 4471050 - 4471185
Alignment:
Q  149 gaaaatagaacaattgggagtgaatgttcttcagcaacatctactgtaaatggcatatagcaatcggaaacaaagcaagtaactggaggtataagaccag 248  Q
    ||||| ||||| |||||||||| | ||||||||||| ||||||||||||||||||| || ||||| ||||  | ||||||||||||||| ||||||||||    
T  4471050 gaaaagagaacgattgggagtgcacgttcttcagcagcatctactgtaaatggcatgtaacaatcagaaattatgcaagtaactggagggataagaccag 4471149  T
Q  249 aagttgcagaatcatgaagtttagcaaaaagttcac 284  Q
     ||| |||||  ||| |||| ||| || ||||||||    
T  4471150 cagtggcagaggcatcaagtctagtaagaagttcac 4471185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 123 - 284
Target Start/End: Complemental strand, 4298519 - 4298358
Alignment:
Q  123 ccaagaagaaacaagcactacatggcgaaaatagaacaattgggagtgaatgttcttcagcaacatctactgtaaatggcatatagcaatcggaaacaaa 222  Q
    |||||||| |||| ||||||  |||  |||| |||| ||||||||||| ||||||||| ||| | | ||  ||||||| |||  |  |||| | ||| ||    
T  4298519 ccaagaaggaacatgcactagctggacaaaagagaataattgggagtgcatgttcttccgcagcttgtatggtaaatgacattaaaaaatcagcaactaa 4298420  T
Q  223 gcaagtaactggaggtataagaccagaagttgcagaatcatgaagtttagcaaaaagttcac 284  Q
    |||||||||||| |||| |||||||| ||| ||||||||| |||||||||||| ||||||||    
T  4298419 gcaagtaactggtggtacaagaccagcagtggcagaatcacgaagtttagcaagaagttcac 4298358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 35 - 244
Target Start/End: Original strand, 4462230 - 4462438
Alignment:
Q  35 tctctttggaagaaaaagggattataaatgatattacctttgagtggcagtaaaccattctgaaacagtttaggaatatgaaaaccagccaagaagaaac 134  Q
    |||||| ||||||||||||||  | | ||||||| ||||||||||||||| | |||||||||||||| ||||||||| ||| ||  ||  |   || |||    
T  4462230 tctcttaggaagaaaaagggaacaaagatgatat-acctttgagtggcagcacaccattctgaaacaatttaggaatgtgagaagtagtgagtgagcaac 4462328  T
Q  135 aagcactacatggcgaaaatagaacaattgggagtgaatgttcttcagcaacatctactgtaaatggcatatagcaatcggaaacaaagcaagtaactgg 234  Q
    | |||||    || ||||| ||||| |||||||||| | ||| ||||||  |||| |||||||||||||| || ||||| ||||| | ||||||||| ||    
T  4462329 atgcactgaccggggaaaagagaacgattgggagtgcacgttgttcagcggcatccactgtaaatggcatgtaacaatcagaaactatgcaagtaaccgg 4462428  T
Q  235 aggtataaga 244  Q
    ||| ||||||    
T  4462429 agggataaga 4462438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 149 - 284
Target Start/End: Original strand, 4627283 - 4627418
Alignment:
Q  149 gaaaatagaacaattgggagtgaatgttcttcagcaacatctactgtaaatggcatatagcaatcggaaacaaagcaagtaactggaggtataagaccag 248  Q
    ||||| ||| |||||||||||| ||||||||||||| | | ||  ||||||| |||  | ||||| ||||| |||||||||||||| |  | ||||||||    
T  4627283 gaaaagagagcaattgggagtgcatgttcttcagcagcttgtatggtaaatgacattaaacaatctgaaactaagcaagtaactggtgcaacaagaccag 4627382  T
Q  249 aagttgcagaatcatgaagtttagcaaaaagttcac 284  Q
     ||| || || |||||||||||||||| ||||||||    
T  4627383 cagtggctgagtcatgaagtttagcaagaagttcac 4627418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 161 - 247
Target Start/End: Complemental strand, 4266040 - 4265954
Alignment:
Q  161 attgggagtgaatgttcttcagcaacatctactgtaaatggcatatagcaatcggaaacaaagcaagtaactggaggtataagacca 247  Q
    |||||||||| ||||||||| ||| |||||| |||||| ||||| || ||||||||||| |||||||||| ||| || |||| ||||    
T  4266040 attgggagtgcatgttcttccgcagcatctattgtaaaaggcatgtaacaatcggaaaccaagcaagtaattggtggaataaaacca 4265954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 161 - 289
Target Start/End: Complemental strand, 4513965 - 4513837
Alignment:
Q  161 attgggagtgaatgttcttcagcaacatctactgtaaatggcatatagcaatcggaaacaaagcaagtaactggaggtataagaccagaagttgcagaat 260  Q
    |||||||||| | ||||||||||||| | |   ||||||||||||   ||||| ||||| |||||||||||   |||||||||||| |   ||||||| |    
T  4513965 attgggagtgcaagttcttcagcaacttgtgtagtaaatggcataatacaatcagaaactaagcaagtaacaaaaggtataagaccggcttttgcagagt 4513866  T
Q  261 catgaagtttagcaaaaagttcacgaaaa 289  Q
    ||| ||||||||| |||||||| ||||||    
T  4513865 cattaagtttagctaaaagttcgcgaaaa 4513837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 223 - 289
Target Start/End: Original strand, 4581221 - 4581287
Alignment:
Q  223 gcaagtaactggaggtataagaccagaagttgcagaatcatgaagtttagcaaaaagttcacgaaaa 289  Q
    ||||||||||||||| | |||||||||||| ||||| |||| |||| |||||| |||||||| ||||    
T  4581221 gcaagtaactggagggacaagaccagaagtggcagagtcattaagtctagcaagaagttcacaaaaa 4581287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 157 - 284
Target Start/End: Complemental strand, 4259163 - 4259036
Alignment:
Q  157 aacaattgggagtgaatgttcttcagcaacatctactgtaaatggcatatagcaatcggaaacaaagcaagtaactggaggtataagaccagaagttgca 256  Q
    |||||||||||||| ||| ||||||||| | | ||   |||||| ||| || ||||| ||||| ||||||||||| || || | || ||||| ||| ||     
T  4259163 aacaattgggagtgcatgctcttcagcagcttgtatactaaatgacatgtaacaatcagaaactaagcaagtaacaggtggaacaataccagtagtggct 4259064  T
Q  257 gaatcatgaagtttagcaaaaagttcac 284  Q
    || || ||||||||||||| ||||||||    
T  4259063 gagtcttgaagtttagcaagaagttcac 4259036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 69 - 111
Target Start/End: Original strand, 4470970 - 4471012
Alignment:
Q  69 tacctttgagtggcagtaaaccattctgaaacagtttaggaat 111  Q
    |||||||||||||||| | |||||||||||||| |||||||||    
T  4470970 tacctttgagtggcagcacaccattctgaaacaatttaggaat 4471012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 224 - 282
Target Start/End: Original strand, 4586840 - 4586898
Alignment:
Q  224 caagtaactggaggtataagaccagaagttgcagaatcatgaagtttagcaaaaagttc 282  Q
    ||||| |||||||| ||||||||||| |||||||| |||| |||| |||||| ||||||    
T  4586840 caagtgactggagggataagaccagatgttgcagagtcattaagtctagcaagaagttc 4586898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 155 - 232
Target Start/End: Complemental strand, 4255628 - 4255551
Alignment:
Q  155 agaacaattgggagtgaatgttcttcagcaacatctactgtaaatggcatatagcaatcggaaacaaagcaagtaact 232  Q
    |||||||||||||||| ||| ||||||||| | | ||  ||||||| ||| || ||||| ||||| ||||||||||||    
T  4255628 agaacaattgggagtgcatgctcttcagcagcttgtatggtaaatgacatgtaacaatcagaaactaagcaagtaact 4255551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 47; Significance: 8e-18; HSPs: 1)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 155 - 289
Target Start/End: Complemental strand, 20862793 - 20862659
Alignment:
Q  155 agaacaattgggagtgaatgttcttcagcaacatctactgtaaatggcatatagcaatcggaaacaaagcaagtaactggaggtataagaccagaagttg 254  Q
    |||||||||||||||| | ||||||||||||| | ||  |||| || |||  | | ||| ||||| ||||||||||| |||||||||||||||||  | |    
T  20862793 agaacaattgggagtgcaagttcttcagcaacttgtatggtaactgacatgaaactatcagaaactaagcaagtaacaggaggtataagaccagatttgg 20862694  T
Q  255 cagaatcatgaagtttagcaaaaagttcacgaaaa 289  Q
     ||| ||||||||||| |||| |||||||||||||    
T  20862693 aagagtcatgaagtttggcaagaagttcacgaaaa 20862659  T

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Target: scaffold0288 (Bit Score: 44; Significance: 5e-16; HSPs: 1)
Name: scaffold0288
Description:

Target: scaffold0288; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 124 - 295
Target Start/End: Complemental strand, 2474 - 2303
Alignment:
Q  124 caagaagaaacaagcactacatggcgaaaatagaacaattgggagtgaatgttcttcagcaacatctactgtaaatggcatatagcaatcggaaacaaag 223  Q
    ||||||| | || ||||||| ||||||| | ||||  |||||||||| || |||||||||| | | ||  ||||||| ||| || ||||| ||||| |||    
T  2474 caagaaggagcatgcactacctggcgaataaagaaggattgggagtgcatattcttcagcagcttgtatggtaaatgacatgtaacaatcagaaactaag 2375  T
Q  224 caagtaactggaggtataagaccagaagttgcagaatcatgaagtttagcaaaaagttcacgaaaaaagtga 295  Q
    | ||| |||||||| |||||||||||| | ||||| || | |||| |||||| |||||| ||||| ||||||    
T  2374 ctagttactggagggataagaccagaattggcagactcgtcaagtctagcaagaagttcgcgaaagaagtga 2303  T

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Target: scaffold0477 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0477
Description:

Target: scaffold0477; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 149 - 283
Target Start/End: Complemental strand, 3517 - 3383
Alignment:
Q  149 gaaaatagaacaattgggagtgaatgttcttcagcaacatctactgtaaatggcatatagcaatcggaaacaaagcaagtaactggaggtataagaccag 248  Q
    ||||| |||||||||||||||| ||||||||||||| | | ||  ||||||||||| || ||||| |  || | |||||||||| | || | ||||||||    
T  3517 gaaaagagaacaattgggagtgcatgttcttcagcagcttgtatggtaaatggcatgtaacaatcagcgactatgcaagtaacttgtggaacaagaccag 3418  T
Q  249 aagttgcagaatcatgaagtttagcaaaaagttca 283  Q
     ||| ||||| |||||||||||| ||| |||||||    
T  3417 cagtggcagagtcatgaagtttaacaagaagttca 3383  T

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Target: scaffold0475 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0475
Description:

Target: scaffold0475; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 196 - 295
Target Start/End: Original strand, 2001 - 2100
Alignment:
Q  196 aaatggcatatagcaatcggaaacaaagcaagtaactggaggtataagaccagaagttgcagaatcatgaagtttagcaaaaagttcacgaaaaaagtga 295  Q
    ||||| ||| || ||||| ||||| |||| ||| |||||||| |||||||||||| | ||||| || | |||| |||||| |||||| ||||| ||||||    
T  2001 aaatgacatgtaacaatcagaaactaagctagttactggagggataagaccagaattggcagactcgtcaagtctagcaagaagttcgcgaaagaagtga 2100  T

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