View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF3321-Insertion-11 (Length: 285)
Name: NF3321-Insertion-11
Description: NF3321
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3321-Insertion-11 |
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| [»] chr7 (1 HSPs) |
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Alignment Details
Target: chr4 (Bit Score: 251; Significance: 1e-139; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 251; E-Value: 1e-139
Query Start/End: Original strand, 8 - 262
Target Start/End: Complemental strand, 32833401 - 32833147
Alignment:
| Q |
8 |
atatattggattatgttatgggatatgaacttgtgcttgaaattttagtgacggttattcttaaatttatgcatatctgtcaggataacaattttaaaca |
107 |
Q |
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| T |
32833401 |
atatattggattatgttatgggatatgaacttgtgcttgaaattttagtgacggttattcttaaatttatgcatatctgtcaggataacaattttaaaca |
32833302 |
T |
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| Q |
108 |
ttattaagtagtggcttttatttaaagataattaaaaagtggcttttatgatgtatgatgatgactgatattgaatagtggcctttatccttatgtttga |
207 |
Q |
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| T |
32833301 |
ttattaagtagtggcttttatttaaagataattaaaaagtggcttttatgatgtatgatgatgactgatattgaatagtggcctttatccttatgtttga |
32833202 |
T |
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| Q |
208 |
tttgtaagcttgcttcacaaataagtgtaaccgaagtctaaccgttttagtgttt |
262 |
Q |
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| T |
32833201 |
tttgtaagcttgcttcacaaataactgtaaccgaagtctaaccgttttagtgttt |
32833147 |
T |
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Target: chr7 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 244 - 285
Target Start/End: Original strand, 16834688 - 16834730
Alignment:
| Q |
244 |
tctaaccgttttagtgttt-gatatatgataactaactgacac |
285 |
Q |
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| T |
16834688 |
tctaaccgttttagtgttttgatatatgataactaactgacac |
16834730 |
T |
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