View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF3321-Insertion-13 (Length: 199)
Name: NF3321-Insertion-13
Description: NF3321
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3321-Insertion-13 |
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| [»] chr5 (1 HSPs) |
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Alignment Details
Target: chr5 (Bit Score: 192; Significance: 1e-104; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 8 - 199
Target Start/End: Complemental strand, 1445303 - 1445112
Alignment:
| Q |
8 |
atgaagagtttcttcaagctccttccctaacggtgcagcaccagacaacaccaaccttattgaactcagatcaaactccgccaccgacggactcttcgcc |
107 |
Q |
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| T |
1445303 |
atgaagagtttcttcaagctccttccctaacggtgcagcaccagacaacaccaaccttattgaactcagatcaaactccgccaccgacggactcttcgcc |
1445204 |
T |
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| Q |
108 |
aacgccaaaaccaacggcggaacaaccatcgccaccgtaaccttatgtttttgtataagaccaagcaaagtcccaatctcaaatttatgcat |
199 |
Q |
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| T |
1445203 |
aacgccaaaaccaacggcggaacaaccatcgccaccgtaaccttatgtttttgtataagaccaagcaaagtcccaatctcaaatttatgcat |
1445112 |
T |
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