View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF3321_high_9 (Length: 250)
Name: NF3321_high_9
Description: NF3321
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3321_high_9 |
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| [»] chr4 (1 HSPs) |
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Alignment Details
Target: chr4 (Bit Score: 226; Significance: 1e-125; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 226; E-Value: 1e-125
Query Start/End: Original strand, 13 - 250
Target Start/End: Original strand, 53421866 - 53422103
Alignment:
| Q |
13 |
aatatattttagaaaattcaaatgtgacataatgggaaatataaagaagccgatgcccaaaaatctagatgtttaaccacaggtgacttctagtgattaa |
112 |
Q |
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| T |
53421866 |
aatatattttagaaaattcaaatgtgacatgatgggaaatataaagaagccgatgcccaaaaatctagatgtttaaccacaggtgacttctagtgattaa |
53421965 |
T |
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| Q |
113 |
aaaggtttctcaaaaggagaaaaacttttcgtattcattctctcagaacgctggccattaatacattggtgaggtgattcattgataaattctacttaac |
212 |
Q |
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|||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |
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| T |
53421966 |
aaaggtttctcaaaaggagaaaaacttttcatattcattctctcagaacgctggcgattaatacattggtgaggtgattcattgataaattctacttaac |
53422065 |
T |
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| Q |
213 |
ttaatcaaaatattttggttaagtgacgtgtcttacat |
250 |
Q |
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|||||||||||||||||||||||||||||||||||||| |
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| T |
53422066 |
ttaatcaaaatattttggttaagtgacgtgtcttacat |
53422103 |
T |
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