View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF3324_low_7 (Length: 252)

Name: NF3324_low_7
Description: NF3324
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF3324_low_7
NF3324_low_7
[»] chr1 (50 HSPs)
chr1 (1-244)||(6102125-6102371)
chr1 (96-177)||(2295165-2295247)
chr1 (70-165)||(38001639-38001734)
chr1 (60-170)||(47498766-47498876)
chr1 (96-170)||(49938816-49938891)
chr1 (84-170)||(1432572-1432659)
chr1 (60-170)||(6292526-6292636)
chr1 (60-166)||(36514606-36514713)
chr1 (61-170)||(11941296-11941406)
chr1 (56-162)||(4768763-4768870)
chr1 (113-177)||(33204313-33204377)
chr1 (57-113)||(35669002-35669057)
chr1 (33-142)||(45975693-45975806)
chr1 (60-134)||(51929501-51929576)
chr1 (56-141)||(27820152-27820237)
chr1 (60-175)||(38115998-38116115)
chr1 (60-144)||(38480526-38480612)
chr1 (60-124)||(10199381-10199445)
chr1 (66-170)||(14576580-14576685)
chr1 (84-176)||(15943017-15943110)
chr1 (60-113)||(38503449-38503502)
chr1 (123-171)||(46504143-46504192)
chr1 (29-92)||(14629971-14630037)
chr1 (97-164)||(38247397-38247465)
chr1 (99-170)||(50644181-50644253)
chr1 (60-170)||(3233941-3234052)
chr1 (60-170)||(3887558-3887669)
chr1 (96-170)||(5720994-5721069)
chr1 (100-150)||(34795392-34795443)
chr1 (60-169)||(37593611-37593721)
chr1 (100-170)||(37617391-37617462)
chr1 (62-113)||(37811887-37811937)
chr1 (56-154)||(38018306-38018405)
chr1 (69-170)||(27146181-27146283)
chr1 (29-90)||(34290235-34290299)
chr1 (59-113)||(35925722-35925775)
chr1 (70-135)||(38170652-38170717)
chr1 (104-161)||(39658444-39658502)
chr1 (87-168)||(39976138-39976220)
chr1 (60-144)||(27145688-27145772)
chr1 (60-113)||(31118076-31118128)
chr1 (96-164)||(43990326-43990395)
chr1 (138-170)||(2522708-2522740)
chr1 (67-126)||(4549888-4549947)
chr1 (138-170)||(30259412-30259444)
chr1 (60-108)||(30815643-30815690)
chr1 (60-135)||(31517702-31517777)
chr1 (60-92)||(32859951-32859983)
chr1 (60-104)||(44815297-44815340)
chr1 (56-135)||(51695456-51695536)
[»] chr3 (37 HSPs)
chr3 (30-170)||(21367667-21367811)
chr3 (66-170)||(24085264-24085369)
chr3 (56-170)||(31365235-31365350)
chr3 (69-169)||(402469-402570)
chr3 (30-171)||(39602136-39602280)
chr3 (58-170)||(31365114-31365227)
chr3 (65-165)||(46778122-46778223)
chr3 (29-164)||(46886624-46886763)
chr3 (66-177)||(26878239-26878351)
chr3 (60-167)||(34610735-34610843)
chr3 (60-162)||(30443926-30444029)
chr3 (29-170)||(25447171-25447315)
chr3 (96-170)||(20257605-20257681)
chr3 (96-169)||(3776317-3776392)
chr3 (69-177)||(33046717-33046829)
chr3 (94-170)||(22892-22969)
chr3 (61-170)||(26911619-26911735)
chr3 (89-170)||(26990151-26990232)
chr3 (98-138)||(34637943-34637984)
chr3 (66-170)||(46031029-46031134)
chr3 (99-170)||(584118-584190)
chr3 (96-163)||(22203499-22203566)
chr3 (84-170)||(5436129-5436216)
chr3 (60-170)||(20880509-20880620)
chr3 (96-170)||(39980798-39980873)
chr3 (60-134)||(50952366-50952440)
chr3 (68-177)||(9832674-9832784)
chr3 (56-137)||(26878146-26878228)
chr3 (66-169)||(42747709-42747814)
chr3 (59-134)||(23808027-23808102)
chr3 (146-178)||(28779439-28779471)
chr3 (60-170)||(32582777-32582881)
chr3 (31-133)||(37273135-37273240)
chr3 (60-135)||(43115089-43115164)
chr3 (96-170)||(44014724-44014800)
chr3 (60-92)||(45432944-45432976)
chr3 (60-92)||(45555009-45555041)
[»] chr5 (45 HSPs)
chr5 (32-170)||(39594809-39594951)
chr5 (29-177)||(7984968-7985120)
chr5 (84-165)||(10640010-10640092)
chr5 (29-169)||(12425570-12425716)
chr5 (65-170)||(41419357-41419463)
chr5 (29-170)||(39105463-39105609)
chr5 (88-170)||(11064727-11064810)
chr5 (66-182)||(1464934-1465051)
chr5 (31-170)||(9202674-9202817)
chr5 (99-170)||(9107162-9107234)
chr5 (65-170)||(41534479-41534582)
chr5 (66-170)||(16937809-16937914)
chr5 (60-165)||(11700196-11700301)
chr5 (113-162)||(19460260-19460309)
chr5 (59-126)||(499702-499769)
chr5 (66-169)||(40426804-40426908)
chr5 (66-113)||(4625767-4625814)
chr5 (56-170)||(6096576-6096691)
chr5 (60-165)||(42100344-42100450)
chr5 (76-177)||(42583261-42583363)
chr5 (56-109)||(1899183-1899235)
chr5 (60-113)||(8334604-8334657)
chr5 (60-160)||(19460323-19460423)
chr5 (66-137)||(16457938-16458010)
chr5 (60-135)||(17258845-17258920)
chr5 (68-143)||(42228080-42228156)
chr5 (56-170)||(7674677-7674791)
chr5 (96-170)||(7705924-7705999)
chr5 (66-132)||(7808544-7808611)
chr5 (60-134)||(9106854-9106929)
chr5 (84-170)||(12433099-12433186)
chr5 (74-144)||(39248146-39248216)
chr5 (59-113)||(2880532-2880585)
chr5 (60-137)||(29925874-29925952)
chr5 (84-160)||(31038341-31038418)
chr5 (84-160)||(31047565-31047642)
chr5 (76-113)||(39983679-39983716)
chr5 (83-154)||(41981645-41981715)
chr5 (96-171)||(3520646-3520722)
chr5 (30-92)||(14182386-14182450)
chr5 (113-165)||(15015930-15015982)
chr5 (60-88)||(19138726-19138754)
chr5 (98-165)||(35445775-35445843)
chr5 (60-135)||(37611177-37611252)
chr5 (60-135)||(37787907-37787982)
[»] chr8 (38 HSPs)
chr8 (29-166)||(27028830-27028971)
chr8 (61-171)||(32840911-32841022)
chr8 (60-170)||(6950355-6950466)
chr8 (60-170)||(33808336-33808446)
chr8 (60-108)||(3536934-3536982)
chr8 (95-166)||(42893420-42893492)
chr8 (30-154)||(1930035-1930163)
chr8 (96-164)||(26771334-26771403)
chr8 (30-170)||(30251380-30251524)
chr8 (60-137)||(29168016-29168094)
chr8 (60-165)||(31716158-31716264)
chr8 (60-126)||(42215277-42215343)
chr8 (60-165)||(1058008-1058113)
chr8 (120-177)||(1892143-1892201)
chr8 (66-170)||(14280347-14280453)
chr8 (96-177)||(35534532-35534614)
chr8 (60-125)||(41606875-41606940)
chr8 (113-170)||(36963280-36963337)
chr8 (113-170)||(38602414-38602471)
chr8 (114-170)||(1096578-1096634)
chr8 (55-166)||(27492965-27493077)
chr8 (59-165)||(30191072-30191179)
chr8 (96-170)||(38648420-38648495)
chr8 (94-164)||(38750424-38750495)
chr8 (94-143)||(6881994-6882044)
chr8 (139-177)||(7008711-7008749)
chr8 (98-143)||(28763439-28763485)
chr8 (60-113)||(10383918-10383970)
chr8 (56-171)||(11376732-11376848)
chr8 (60-113)||(13459678-13459730)
chr8 (122-167)||(30657706-30657751)
chr8 (60-135)||(30918146-30918220)
chr8 (84-160)||(42043291-42043368)
chr8 (96-170)||(16162828-16162904)
chr8 (126-170)||(16915833-16915877)
chr8 (60-108)||(31751546-31751594)
chr8 (103-170)||(43717860-43717928)
chr8 (60-92)||(44401594-44401626)
[»] chr4 (45 HSPs)
chr4 (60-170)||(52315123-52315234)
chr4 (56-164)||(21731588-21731697)
chr4 (66-169)||(25904150-25904254)
chr4 (29-166)||(17822795-17822936)
chr4 (67-177)||(49939870-49939981)
chr4 (59-170)||(1374502-1374614)
chr4 (96-170)||(7367980-7368056)
chr4 (56-170)||(41336789-41336904)
chr4 (96-170)||(54426112-54426187)
chr4 (96-169)||(29657453-29657527)
chr4 (85-170)||(55437134-55437220)
chr4 (60-170)||(24169296-24169407)
chr4 (68-170)||(27043756-27043859)
chr4 (29-170)||(35571557-35571702)
chr4 (96-170)||(39011054-39011129)
chr4 (84-161)||(1706679-1706757)
chr4 (115-177)||(39691068-39691130)
chr4 (74-170)||(15173229-15173326)
chr4 (60-113)||(24929526-24929578)
chr4 (66-170)||(25571299-25571403)
chr4 (63-108)||(29263406-29263450)
chr4 (29-93)||(679254-679318)
chr4 (60-135)||(1137745-1137820)
chr4 (60-170)||(6987667-6987778)
chr4 (60-143)||(13126529-13126613)
chr4 (76-170)||(28615384-28615478)
chr4 (103-170)||(40174633-40174701)
chr4 (29-92)||(7694015-7694081)
chr4 (96-170)||(21043162-21043237)
chr4 (96-170)||(22030272-22030347)
chr4 (60-142)||(25332808-25332891)
chr4 (66-144)||(49202684-49202763)
chr4 (62-170)||(19304961-19305070)
chr4 (60-113)||(20936214-20936266)
chr4 (59-92)||(35064887-35064920)
chr4 (59-170)||(37575862-37575974)
chr4 (145-178)||(40613290-40613323)
chr4 (63-135)||(50799992-50800064)
chr4 (70-157)||(20719746-20719834)
chr4 (60-143)||(21523591-21523674)
chr4 (113-169)||(29388701-29388757)
chr4 (96-167)||(43506004-43506076)
chr4 (60-92)||(43824316-43824348)
chr4 (115-163)||(44862917-44862965)
chr4 (84-175)||(49003796-49003888)
[»] chr7 (29 HSPs)
chr7 (60-177)||(19302482-19302600)
chr7 (60-143)||(20526882-20526966)
chr7 (29-170)||(20526445-20526590)
chr7 (30-170)||(48470044-48470188)
chr7 (66-177)||(34035956-34036068)
chr7 (60-154)||(19022527-19022622)
chr7 (60-154)||(19214348-19214443)
chr7 (29-154)||(33678779-33678908)
chr7 (95-178)||(22296146-22296231)
chr7 (60-144)||(21568447-21568532)
chr7 (113-170)||(22283572-22283629)
chr7 (96-168)||(25596101-25596174)
chr7 (29-113)||(39967919-39968006)
chr7 (30-170)||(44821959-44822102)
chr7 (66-172)||(25670510-25670617)
chr7 (69-164)||(33601342-33601438)
chr7 (29-177)||(30535562-30535714)
chr7 (115-170)||(33266412-33266467)
chr7 (97-170)||(4970718-4970792)
chr7 (60-164)||(36517612-36517715)
chr7 (98-165)||(46280211-46280282)
chr7 (100-177)||(20234535-20234611)
chr7 (60-109)||(25511659-25511707)
chr7 (56-135)||(28128362-28128436)
chr7 (121-166)||(31744897-31744942)
chr7 (59-135)||(33894659-33894735)
chr7 (113-170)||(45338540-45338597)
chr7 (103-170)||(20526216-20526284)
chr7 (60-166)||(46104497-46104604)
[»] chr6 (23 HSPs)
chr6 (60-165)||(34910340-34910446)
chr6 (61-154)||(31813195-31813289)
chr6 (56-166)||(34404656-34404766)
chr6 (96-177)||(31623619-31623701)
chr6 (66-164)||(2455030-2455126)
chr6 (59-108)||(34939776-34939824)
chr6 (59-170)||(848021-848132)
chr6 (66-164)||(2455298-2455397)
chr6 (29-134)||(2735068-2735177)
chr6 (60-126)||(9912161-9912228)
chr6 (60-165)||(13907618-13907722)
chr6 (93-166)||(26559169-26559244)
chr6 (103-177)||(30641821-30641896)
chr6 (60-177)||(430296-430414)
chr6 (97-170)||(6538584-6538658)
chr6 (147-177)||(7351590-7351620)
chr6 (75-160)||(9559358-9559444)
chr6 (96-165)||(30926588-30926658)
chr6 (94-170)||(21405080-21405157)
chr6 (29-113)||(31624089-31624175)
chr6 (31-135)||(33887831-33887938)
chr6 (139-171)||(2455923-2455955)
chr6 (60-92)||(6536980-6537012)
[»] chr2 (45 HSPs)
chr2 (56-169)||(2142683-2142797)
chr2 (30-143)||(40682348-40682464)
chr2 (29-165)||(29628673-29628814)
chr2 (60-165)||(750703-750809)
chr2 (56-143)||(36534797-36534885)
chr2 (87-170)||(42419853-42419937)
chr2 (84-166)||(449904-449987)
chr2 (60-126)||(28677630-28677696)
chr2 (97-170)||(27317449-27317523)
chr2 (36-135)||(8017440-8017542)
chr2 (70-171)||(5902476-5902576)
chr2 (60-170)||(7928224-7928336)
chr2 (113-177)||(39073621-39073685)
chr2 (60-132)||(40279440-40279512)
chr2 (60-170)||(4606958-4607069)
chr2 (66-161)||(5365514-5365608)
chr2 (96-170)||(23974419-23974494)
chr2 (96-170)||(30331820-30331895)
chr2 (96-165)||(42659142-42659212)
chr2 (66-134)||(16451157-16451226)
chr2 (32-170)||(26143568-26143708)
chr2 (29-109)||(29316764-29316846)
chr2 (36-162)||(3611232-3611362)
chr2 (60-135)||(12313135-12313210)
chr2 (87-177)||(2416373-2416464)
chr2 (138-177)||(6561449-6561488)
chr2 (33-122)||(26626876-26626969)
chr2 (64-170)||(41812018-41812125)
chr2 (97-170)||(10619146-10619220)
chr2 (59-135)||(787364-787440)
chr2 (60-113)||(1647269-1647321)
chr2 (23-91)||(3235390-3235461)
chr2 (66-162)||(19608567-19608664)
chr2 (60-113)||(35379001-35379053)
chr2 (60-113)||(40279300-40279353)
chr2 (60-113)||(40279370-40279423)
chr2 (60-113)||(41817201-41817253)
chr2 (60-113)||(43065435-43065487)
chr2 (96-135)||(1801736-1801776)
chr2 (60-143)||(7035520-7035604)
chr2 (61-113)||(33256774-33256825)
chr2 (139-175)||(35809980-35810016)
chr2 (60-135)||(40158751-40158826)
chr2 (60-92)||(42420030-42420062)
chr2 (63-111)||(44438826-44438873)
[»] scaffold0057 (1 HSPs)
scaffold0057 (87-164)||(24681-24759)
[»] scaffold0528 (1 HSPs)
scaffold0528 (84-160)||(918-995)
[»] scaffold0110 (1 HSPs)
scaffold0110 (116-177)||(33832-33893)


Alignment Details
Target: chr1 (Bit Score: 225; Significance: 1e-124; HSPs: 50)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 225; E-Value: 1e-124
Query Start/End: Original strand, 1 - 244
Target Start/End: Original strand, 6102125 - 6102371
Alignment:
Q  1 ttagattgtttttgtatacacttatacactataagctgttttcacaagctatctgg---aatttatggaaataagctgaaaacaatttatgaacaatatc 97  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||||   |||||||||||||||||||||||||||||||||||||||||    
T  6102125 ttagattgtttttgtatacacttatacactataagctgttttcataagctatctgggagaatttatggaaataagctgaaaacaatttatgaacaatatc 6102224  T
Q  98 ataagctgttttcatagttctcccaaacaatctcacaaaatttatgccggtagataaactcaaataagtcaatttaaacaatttcataaatgaatgcaag 197  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6102225 ataagctgttttcatagttctcccaaacaatctcacaaaatttatgccggtagataaactcaaataagtcaatttaaacaatttcataaatgaatgcaag 6102324  T
Q  198 gtttactcttgtgatgctgtaggttgtgtcctttttctttctctctg 244  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||    
T  6102325 gtttactcttgtgatgctgtaggttgtgtcttttttctttctctctg 6102371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 96 - 177
Target Start/End: Original strand, 2295165 - 2295247
Alignment:
Q  96 tcataagctgttttcata-gttctcccaaacaatctcacaaaatttatgccggtagataaactcaaataagtcaatttaaaca 177  Q
    |||||||||||||||||| ||||||||||||| |||||||||| ||||||| |||||||| |||||||||| ||||| |||||    
T  2295165 tcataagctgttttcataagttctcccaaacagtctcacaaaacttatgccagtagataagctcaaataagccaattcaaaca 2295247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 70 - 165
Target Start/End: Original strand, 38001639 - 38001734
Alignment:
Q  70 aagctgaaaacaatttatgaacaatatcataagctgttttcata-gttctcccaaacaatctcacaaaatttatgccggtagataaactcaaataag 165  Q
    ||||||||||||| |||||||||   |||||||||||||||||| ||||||||||||| |||||||||| ||||| | || ||||||||||||||||    
T  38001639 aagctgaaaacaacttatgaacagg-tcataagctgttttcataagttctcccaaacagtctcacaaaacttatgtcagttgataaactcaaataag 38001734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 60 - 170
Target Start/End: Complemental strand, 47498876 - 47498766
Alignment:
Q  60 ttatggaaataagctgaaaacaatttatgaacaatatcataagctgttttcat-agttctcccaaacaatctcacaaaatttatgccggtagataaactc 158  Q
    ||||| ||||||||| ||||||| ||||||||||||||||||||| ||||||| ||||||||||||||||| || |||| ||| |||  || |||| |||    
T  47498876 ttatgaaaataagctaaaaacaacttatgaacaatatcataagctattttcataagttctcccaaacaatcacaaaaaactta-gccactacataagctc 47498778  T
Q  159 aaataagtcaat 170  Q
     |||||||||||    
T  47498777 gaataagtcaat 47498766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 96 - 170
Target Start/End: Original strand, 49938816 - 49938891
Alignment:
Q  96 tcataagctgttttcata-gttctcccaaacaatctcacaaaatttatgccggtagataaactcaaataagtcaat 170  Q
    |||||||||||||||||| |||||||||||||||||||||||| |||||||   | ||||||||||||||||||||    
T  49938816 tcataagctgttttcataagttctcccaaacaatctcacaaaacttatgccacgatataaactcaaataagtcaat 49938891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 84 - 170
Target Start/End: Original strand, 1432572 - 1432659
Alignment:
Q  84 ttatgaacaatatcataagctgttttcata-gttctcccaaacaatctcacaaaatttatgccggtagataaactcaaataagtcaat 170  Q
    ||||||||||| ||||| ||| |||||||| ||||| ||||||| |||||||||||||||| |||| ||||| |||||||||| ||||    
T  1432572 ttatgaacaatgtcatacgctattttcataagttcttccaaacagtctcacaaaatttatgtcggtggataagctcaaataagccaat 1432659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 60 - 170
Target Start/End: Original strand, 6292526 - 6292636
Alignment:
Q  60 ttatggaaataagctgaaaacaatttatgaacaatatcataagctgttttcatagttctcccaaacaatctcacaaaat--ttatgccggtagataaact 157  Q
    ||||| ||||||||||||||||  ||||||||| | |||||||||||||| | | |||||||||||||||||| ||| |  ||||| | |||||||| ||    
T  6292526 ttatgaaaataagctgaaaacagcttatgaaca-tgtcataagctgttttaaaaattctcccaaacaatctca-aaagtgcttatgtcagtagataagct 6292623  T
Q  158 caaataagtcaat 170  Q
    |||||||||||||    
T  6292624 caaataagtcaat 6292636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 60 - 166
Target Start/End: Complemental strand, 36514713 - 36514606
Alignment:
Q  60 ttatggaaataagctgaaaacaatttatgaacaatatcataagctgttttcata-gttctcccaaacaatctcacaaaatttatgccggtagataaactc 158  Q
    ||||| ||| ||||||||||||  || | |||||| ||||||| | |||||||| |||||||| |||| ||||| |||| ||||| | ||||||||||||    
T  36514713 ttatgaaaaaaagctgaaaacagcttctaaacaatgtcataagttattttcataagttctccctaacagtctcaaaaaacttatggcagtagataaactc 36514614  T
Q  159 aaataagt 166  Q
    ||||||||    
T  36514613 aaataagt 36514606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 61 - 170
Target Start/End: Original strand, 11941296 - 11941406
Alignment:
Q  61 tatggaaataagctgaaaacaatttatgaacaatatcataagctgttttcat-agttctcccaaacaatctcacaaaatttatgccggtagataaactca 159  Q
    |||| ||||||||||||||||  ||||||||||| | ||||||| ||||||| || ||||||||||| ||||||| ||  |||||  ||||| ||  |||    
T  11941296 tatgaaaataagctgaaaacagcttatgaacaatgttataagctattttcataagctctcccaaacagtctcacataacatatgctagtagaaaagttca 11941395  T
Q  160 aataagtcaat 170  Q
    |||||||||||    
T  11941396 aataagtcaat 11941406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 56 - 162
Target Start/End: Complemental strand, 4768870 - 4768763
Alignment:
Q  56 gaatttatggaaataagctgaaaacaatttatgaacaatatcataagctgttttcat-agttctcccaaacaatctcacaa-aatttatgccggtagata 153  Q
    ||||||||||||||||||||||||||| ||||| || || || |||||||||||| | |||| ||||||||  ||||||||   |||||||| || ||||    
T  4768870 gaatttatggaaataagctgaaaacaagttatggac-atgtcgtaagctgttttcgtaagttttcccaaactgtctcacaagtgtttatgccagttgata 4768772  T
Q  154 aactcaaat 162  Q
    |||||||||    
T  4768771 aactcaaat 4768763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 113 - 177
Target Start/End: Complemental strand, 33204377 - 33204313
Alignment:
Q  113 agttctcccaaacaatctcacaaaatttatgccggtagataaactcaaataagtcaatttaaaca 177  Q
    |||||||||||||| |||||||||| ||||| | |||||||| |||||||||||| || ||||||    
T  33204377 agttctcccaaacagtctcacaaaacttatgtcagtagataagctcaaataagtcgatctaaaca 33204313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 57 - 113
Target Start/End: Original strand, 35669002 - 35669057
Alignment:
Q  57 aatttatggaaataagctgaaaacaatttatgaacaatatcataagctgttttcata 113  Q
    |||||||||||||||| ||||||||||||||| || ||||||||||||| |||||||    
T  35669002 aatttatggaaataagttgaaaacaatttatggac-atatcataagctgctttcata 35669057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 33 - 142
Target Start/End: Original strand, 45975693 - 45975806
Alignment:
Q  33 aagctgttttcacaagctatctgg---aatttatggaaataagctgaaaacaatttatgaacaatatcataagctgttttcata-gttctcccaaacaat 128  Q
    |||||||||||| ||||||||| |   |||||||| ||||||||||||||||  ||||||| ||| | |||  ||||||||||| |||||||  |||| |    
T  45975693 aagctgttttcataagctatcttggagaatttatgaaaataagctgaaaacagcttatgaataatgttatacactgttttcatatgttctcctgaacagt 45975792  T
Q  129 ctcacaaaatttat 142  Q
    |||| |||||||||    
T  45975793 ctcagaaaatttat 45975806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 60 - 134
Target Start/End: Complemental strand, 51929576 - 51929501
Alignment:
Q  60 ttatggaaataagctgaaaacaatttatgaacaatatcataagctgttttcat-agttctcccaaacaatctcaca 134  Q
    ||||||||||||| |||||| |  ||||||| | | ||||||||||||||||| | ||||||||||||||||||||    
T  51929576 ttatggaaataagttgaaaaaagcttatgaaaattgtcataagctgttttcatgaattctcccaaacaatctcaca 51929501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 56 - 141
Target Start/End: Complemental strand, 27820237 - 27820152
Alignment:
Q  56 gaatttatggaaataagctgaaaacaatttatgaacaatatcataagctgttttcat-agttctcccaaacaatctcacaaaattta 141  Q
    ||||||||| |||||||||||||| |  ||||||||||| | ||||||| ||||||| | |||||| ||||| ||||||||||||||    
T  27820237 gaatttatgaaaataagctgaaaatagcttatgaacaatgtaataagct-ttttcataaattctccaaaacagtctcacaaaattta 27820152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 60 - 175
Target Start/End: Complemental strand, 38116115 - 38115998
Alignment:
Q  60 ttatggaaataagctgaaaacaatttatgaacaatatcataagctgttttcatagtt--ctcccaaacaatctcacaaaatttatgccggtagataaact 157  Q
    ||||| || ||||||| |||||| ||| ||||||| ||||||||| ||||| || ||  |||| ||||  |||||||||| ||| | | |||||||| ||    
T  38116115 ttatgaaagtaagctggaaacaacttaggaacaatgtcataagctattttcttatttttctccaaaaccgtctcacaaaacttacgtcagtagataagct 38116016  T
Q  158 caaataagtcaatttaaa 175  Q
    ||||||||||||| ||||    
T  38116015 caaataagtcaatctaaa 38115998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 60 - 144
Target Start/End: Complemental strand, 38480612 - 38480526
Alignment:
Q  60 ttatggaaataagctgaaaacaatttatgaacaatatcataagctgtttt-cat-agttctcccaaacaatctcacaaaatttatgc 144  Q
    ||||| ||||||||| |||||| ||||||| |||| ||||||||| |||| ||| |||||||||||| | |||||||||| ||||||    
T  38480612 ttatgaaaataagctaaaaacagtttatgagcaatgtcataagctatttttcattagttctcccaaatagtctcacaaaacttatgc 38480526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 60 - 124
Target Start/End: Complemental strand, 10199445 - 10199381
Alignment:
Q  60 ttatggaaataagctgaaaacaatttatgaacaatatcataagctgttttcat-agttctcccaaa 124  Q
    ||||| ||||||||||||||||| |||||||| || ||||||||| ||||||| ||||||||||||    
T  10199445 ttatgaaaataagctgaaaacaacttatgaac-atgtcataagctattttcatgagttctcccaaa 10199381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 66 - 170
Target Start/End: Complemental strand, 14576685 - 14576580
Alignment:
Q  66 aaataagctgaaaacaatttatgaacaatatcataagctgttttcata-gttctcccaaacaatctcacaaaatttatgccggtagataaactcaaataa 164  Q
    |||||||||||||| |  || |||| | | |||||||||||||||| | ||| ||||||||| |  ||||||||||| ||| |||||||| |||||||||    
T  14576685 aaataagctgaaaaaagcttttgaaaattgtcataagctgttttcacaagttgtcccaaacagtgccacaaaatttaagccagtagataagctcaaataa 14576586  T
Q  165 gtcaat 170  Q
    | ||||    
T  14576585 gccaat 14576580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 84 - 176
Target Start/End: Original strand, 15943017 - 15943110
Alignment:
Q  84 ttatgaacaatatcataagctgttttcata-gttctcccaaacaatctcacaaaatttatgccggtagataaactcaaataagtcaatttaaac 176  Q
    ||||||||||| |||| || |||||  ||| ||||||| ||||| ||||||||| ||||||||  || |||||||||||||||| |||| ||||    
T  15943017 ttatgaacaatgtcatcagttgtttctatatgttctcctaaacagtctcacaaagtttatgccaatatataaactcaaataagtaaattcaaac 15943110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 60 - 113
Target Start/End: Complemental strand, 38503502 - 38503449
Alignment:
Q  60 ttatggaaataagctgaaaacaatttatgaacaatatcataagctgttttcata 113  Q
    ||||| ||||||||||||||||| ||||||||||| ||||| ||||||| ||||    
T  38503502 ttatgaaaataagctgaaaacaacttatgaacaatgtcataggctgtttccata 38503449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 123 - 171
Target Start/End: Complemental strand, 46504192 - 46504143
Alignment:
Q  123 aacaatctcacaaa-atttatgccggtagataaactcaaataagtcaatt 171  Q
    |||| ||||||||| | |||||||||||||||||||||||||||||||||    
T  46504192 aacagtctcacaaatacttatgccggtagataaactcaaataagtcaatt 46504143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 29 - 92
Target Start/End: Complemental strand, 14630037 - 14629971
Alignment:
Q  29 ctataagctgttttcacaagctatctggaa---tttatggaaataagctgaaaacaatttatgaaca 92  Q
    ||||||||| |||||| ||||||||| | |   |||||||||||||||||||||||| |||||||||    
T  14630037 ctataagctattttcataagctatcttggagactttatggaaataagctgaaaacaacttatgaaca 14629971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 97 - 164
Target Start/End: Original strand, 38247397 - 38247465
Alignment:
Q  97 cataagctgttttcata-gttctcccaaacaatctcacaaaatttatgccggtagataaactcaaataa 164  Q
    ||||||||||||||||| ||||||||||||| |  ||||||| ||||||| ||||||||  ||||||||    
T  38247397 cataagctgttttcataagttctcccaaacagtgacacaaaacttatgccagtagataagttcaaataa 38247465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 99 - 170
Target Start/End: Complemental strand, 50644253 - 50644181
Alignment:
Q  99 taagctgttttcata-gttctcccaaacaatctcacaaaatttatgccggtagataaactcaaataagtcaat 170  Q
    |||| |||||||||| ||||||||||||| ||||||||||  ||||   |||||||| |||||||||||||||    
T  50644253 taagttgttttcataagttctcccaaacagtctcacaaaacatatgttagtagataagctcaaataagtcaat 50644181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 60 - 170
Target Start/End: Complemental strand, 3234052 - 3233941
Alignment:
Q  60 ttatggaaataagctgaaaacaatttatgaacaatatcataagctgttttcata-gttctcccaaacaatctcacaaaatttatgccggtagataaactc 158  Q
    ||||| |||||||  ||||| || ||||||| | | | ||||| |||||||||| |||||||| |||| |||||||||| ||| | |  ||||||| |||    
T  3234052 ttatgaaaataagtagaaaaaaacttatgaaaactgttataagttgttttcataagttctccctaacagtctcacaaaacttacggcactagataagctc 3233953  T
Q  159 aaataagtcaat 170  Q
    ||||||||||||    
T  3233952 aaataagtcaat 3233941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 60 - 170
Target Start/End: Complemental strand, 3887669 - 3887558
Alignment:
Q  60 ttatggaaataagctgaaaacaatttatgaacaatatcataagctgttttcat-agttctcccaaacaatctcacaaaatttatgccggtagataaactc 158  Q
    ||||| ||||||| | ||||||  ||||||||||| ||||||| ||||||||| |||||| |||||||  || |||||| |||| ||  |||  || |||    
T  3887669 ttatgaaaataagttaaaaacagcttatgaacaatgtcataagatgttttcataagttcttccaaacagccttacaaaacttataccaatagtaaagctc 3887570  T
Q  159 aaataagtcaat 170  Q
    ||||||||||||    
T  3887569 aaataagtcaat 3887558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 96 - 170
Target Start/End: Original strand, 5720994 - 5721069
Alignment:
Q  96 tcataagctgttttcata-gttctcccaaacaatctcacaaaatttatgccggtagataaactcaaataagtcaat 170  Q
    |||||||||||||||||| ||||||||||||| ||  |||||| ||||||  |||| ||| |||||||||| ||||    
T  5720994 tcataagctgttttcataagttctcccaaacagtccaacaaaacttatgcaagtagttaagctcaaataagccaat 5721069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 100 - 150
Target Start/End: Complemental strand, 34795443 - 34795392
Alignment:
Q  100 aagctgttttcata-gttctcccaaacaatctcacaaaatttatgccggtag 150  Q
    |||||||||||||| ||||||||||||| |||| ||||||||||||| ||||    
T  34795443 aagctgttttcataagttctcccaaacagtctcgcaaaatttatgccagtag 34795392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 60 - 169
Target Start/End: Complemental strand, 37593721 - 37593611
Alignment:
Q  60 ttatggaaataagctgaaaacaatttatgaacaatatcataagctgttttca-tagttctcccaaacaatctcacaa-aatttatgccggtagataaact 157  Q
    ||||| ||||||||||||||||  |||||||| || ||||||| ||| |||| ||||| ||||||||| ||| ||||   |||||||| ||| |||| ||    
T  37593721 ttatgaaaataagctgaaaacagcttatgaac-atgtcataagttgtgttcattagttttcccaaacagtctaacaagtgtttatgccagtatataagct 37593623  T
Q  158 caaataagtcaa 169  Q
    ||||||||||||    
T  37593622 caaataagtcaa 37593611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 100 - 170
Target Start/End: Complemental strand, 37617462 - 37617391
Alignment:
Q  100 aagctgttttcatag-ttctcccaaacaatctcacaaaatttatgccggtagataaactcaaataagtcaat 170  Q
    ||||||||||||||  ||||| |||||| |||||||||| ||| | |  |||||||||||||||||||||||    
T  37617462 aagctgttttcataaattctcgcaaacagtctcacaaaacttacggcaatagataaactcaaataagtcaat 37617391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 62 - 113
Target Start/End: Original strand, 37811887 - 37811937
Alignment:
Q  62 atggaaataagctgaaaacaatttatgaacaatatcataagctgttttcata 113  Q
    ||||||||||| |||||||| ||||||||| || ||||||||||||||||||    
T  37811887 atggaaataagttgaaaacagtttatgaac-atgtcataagctgttttcata 37811937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 56 - 154
Target Start/End: Complemental strand, 38018405 - 38018306
Alignment:
Q  56 gaatttatggaaataagctgaaaacaatttatgaacaatatcataagctgttttcat-agttctcccaaacaatctcacaaaatttatgccggtagataa 154  Q
    ||||| ||| |||||||||||||| |  | ||||||||| || ||| ||| |||||| |||| |||||| || |||||||||| ||||||| ||||||||    
T  38018405 gaattcatgaaaataagctgaaaatacctaatgaacaatgtcctaatctgctttcataagttttcccaaccagtctcacaaaacttatgccagtagataa 38018306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 69 - 170
Target Start/End: Complemental strand, 27146283 - 27146181
Alignment:
Q  69 taagctgaaaacaatttatgaacaatatcataagctgttttcat-agttctcccaaacaatctcacaaaatttatgccggtagataaactcaaataagtc 167  Q
    |||| ||||||||  ||||||||||| ||||||| ||||| | | |||||| ||||  | |||||||||| |||||||  ||||||| ||||||| ||||    
T  27146283 taagttgaaaacagcttatgaacaatgtcataagttgtttccttaagttcttccaacaagtctcacaaaacttatgccaatagataagctcaaatcagtc 27146184  T
Q  168 aat 170  Q
    |||    
T  27146183 aat 27146181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 29 - 90
Target Start/End: Original strand, 34290235 - 34290299
Alignment:
Q  29 ctataagctgttttcacaagctatctggaat---ttatggaaataagctgaaaacaatttatgaa 90  Q
    |||||||||||||||| ||||||||| |||    ||||| ||||||||||||||||| |||||||    
T  34290235 ctataagctgttttcataagctatcttgaagaacttatgaaaataagctgaaaacaacttatgaa 34290299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 59 - 113
Target Start/End: Original strand, 35925722 - 35925775
Alignment:
Q  59 tttatggaaataagctgaaaacaatttatgaacaatatcataagctgttttcata 113  Q
    |||||||||||||| ||||||||  |||||||| || ||||||||||||||||||    
T  35925722 tttatggaaataagttgaaaacagcttatgaac-atgtcataagctgttttcata 35925775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 70 - 135
Target Start/End: Complemental strand, 38170717 - 38170652
Alignment:
Q  70 aagctgaaaacaatttatgaacaatatcataagctgttttcat-agttctcccaaacaatctcacaa 135  Q
    ||||||||||||| |||||||| || ||||||||||||||||| || |||||||| || ||||||||    
T  38170717 aagctgaaaacaacttatgaac-atgtcataagctgttttcataagctctcccaagcagtctcacaa 38170652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 104 - 161
Target Start/End: Complemental strand, 39658502 - 39658444
Alignment:
Q  104 tgttttcat-agttctcccaaacaatctcacaaaatttatgccggtagataaactcaaa 161  Q
    ||||||||| ||||||||||| ||||||||||||| ||||| |||| ||||| ||||||    
T  39658502 tgttttcatgagttctcccaatcaatctcacaaaacttatgtcggtggataagctcaaa 39658444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 87 - 168
Target Start/End: Complemental strand, 39976220 - 39976138
Alignment:
Q  87 tgaacaatatcataagctgttttcata-gttctcccaaacaatctcacaaaatttatgccggtagataaactcaaataagtca 168  Q
    |||||||| ||||||  | |||||||| |||||| |||||| | |||||||| ||||| | |||||||| |||||||||||||    
T  39976220 tgaacaatgtcataaattattttcataagttctctcaaacagtttcacaaaacttatgtcagtagataatctcaaataagtca 39976138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 60 - 144
Target Start/End: Complemental strand, 27145772 - 27145688
Alignment:
Q  60 ttatggaaataagctgaaaacaatttatgaacaatatcataagctgttttcat-agttctcccaaacaatctcacaaaatttatgc 144  Q
    ||||| |||||||||||||| || ||||||||||| |||||||  |||||| | |||||| ||||| | |||||||||| ||||||    
T  27145772 ttatgaaaataagctgaaaa-aacttatgaacaatgtcataagtcgttttcttaagttcttccaaaaagtctcacaaaacttatgc 27145688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 60 - 113
Target Start/End: Original strand, 31118076 - 31118128
Alignment:
Q  60 ttatggaaataagctgaaaacaatttatgaacaatatcataagctgttttcata 113  Q
    ||||||||||||||||||||||| | |||||| || ||||||| ||||||||||    
T  31118076 ttatggaaataagctgaaaacaactgatgaac-atgtcataagatgttttcata 31118128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 96 - 164
Target Start/End: Original strand, 43990326 - 43990395
Alignment:
Q  96 tcataagctgttttcata-gttctcccaaacaatctcacaaaatttatgccggtagataaactcaaataa 164  Q
    |||||||||||||||| | ||||||||||| |  ||||||||||||||  | |||||| |||||||||||    
T  43990326 tcataagctgttttcaaacgttctcccaaatagcctcacaaaatttatatcagtagatgaactcaaataa 43990395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 138 - 170
Target Start/End: Original strand, 2522708 - 2522740
Alignment:
Q  138 tttatgccggtagataaactcaaataagtcaat 170  Q
    |||||||| ||||||||||||||||||||||||    
T  2522708 tttatgccagtagataaactcaaataagtcaat 2522740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 67 - 126
Target Start/End: Original strand, 4549888 - 4549947
Alignment:
Q  67 aataagctgaaaacaatttatgaacaatatcataagctgttttca-tagttctcccaaaca 126  Q
    |||||||||||||||| |||||||| || |||||| |||||||||  ||||||||||||||    
T  4549888 aataagctgaaaacaacttatgaac-atgtcataatctgttttcagaagttctcccaaaca 4549947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 138 - 170
Target Start/End: Complemental strand, 30259444 - 30259412
Alignment:
Q  138 tttatgccggtagataaactcaaataagtcaat 170  Q
    ||||||||||||| |||||||||||||||||||    
T  30259444 tttatgccggtaggtaaactcaaataagtcaat 30259412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 60 - 108
Target Start/End: Complemental strand, 30815690 - 30815643
Alignment:
Q  60 ttatggaaataagctgaaaacaatttatgaacaatatcataagctgttt 108  Q
    ||||| |||||||||||||||| ||||||||| || |||||||||||||    
T  30815690 ttatgaaaataagctgaaaacattttatgaac-atgtcataagctgttt 30815643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 60 - 135
Target Start/End: Complemental strand, 31517777 - 31517702
Alignment:
Q  60 ttatggaaataagctgaaaacaatttatgaacaatatcataagctgttttcat-agttctcccaaacaatctcacaa 135  Q
    ||||| ||||||||||||||||  |||||||| || |||| || |||||| || |||||||||||||| ||||||||    
T  31517777 ttatgaaaataagctgaaaacagcttatgaac-atgtcatgagttgttttgataagttctcccaaacagtctcacaa 31517702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 60 - 92
Target Start/End: Complemental strand, 32859983 - 32859951
Alignment:
Q  60 ttatggaaataagctgaaaacaatttatgaaca 92  Q
    ||||||||| |||||||||||||||||||||||    
T  32859983 ttatggaaacaagctgaaaacaatttatgaaca 32859951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 60 - 104
Target Start/End: Complemental strand, 44815340 - 44815297
Alignment:
Q  60 ttatggaaataagctgaaaacaatttatgaacaatatcataagct 104  Q
    ||||||||||||||||||||||||||||  || ||||||||||||    
T  44815340 ttatggaaataagctgaaaacaatttatacac-atatcataagct 44815297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 56 - 135
Target Start/End: Complemental strand, 51695536 - 51695456
Alignment:
Q  56 gaatttatggaaataagctgaaaacaatttatgaacaatatcataagctgttttcat-agttctcccaaacaatctcacaa 135  Q
    ||||||||| |||||||||||||| |  ||||||||||| | ||||| |||||  || |||||| ||||||| ||||||||    
T  51695536 gaatttatgaaaataagctgaaaatagcttatgaacaatgtgataagttgtttatataagttcttccaaacagtctcacaa 51695456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 63; Significance: 2e-27; HSPs: 37)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 30 - 170
Target Start/End: Original strand, 21367667 - 21367811
Alignment:
Q  30 tataagctgttttcacaagctatctgg---aatttatggaaataagctgaaaacaatttatgaacaatatcataagctgttttcat-agttctcccaaac 125  Q
    |||||| |||||||| ||||||||| |   || ||||| ||||||||||||||||  || |||||||| ||||||||||||||||| |||||||||||||    
T  21367667 tataagttgttttcataagctatcttggagaacttatgaaaataagctgaaaacagcttgtgaacaatgtcataagctgttttcataagttctcccaaac 21367766  T
Q  126 aatctcacaaaatttatgccggtagataaactcaaataagtcaat 170  Q
    | || ||||||| |||||| ||||||||| |||||||||| ||||    
T  21367767 agtcccacaaaacttatgctggtagataatctcaaataagccaat 21367811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 66 - 170
Target Start/End: Complemental strand, 24085369 - 24085264
Alignment:
Q  66 aaataagctgaaaacaatttatgaacaatatcataagctgttttcata-gttctcccaaacaatctcacaaaatttatgccggtagataaactcaaataa 164  Q
    ||||||||||||||||   |||||||| || ||||||||||||||||| ||||||| || || |||||||||| |||||||||||||||| |||||||||    
T  24085369 aaataagctgaaaacagcgtatgaacagtaccataagctgttttcataagttctccaaaccagtctcacaaaacttatgccggtagataagctcaaataa 24085270  T
Q  165 gtcaat 170  Q
    | ||||    
T  24085269 gccaat 24085264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 56 - 170
Target Start/End: Complemental strand, 31365350 - 31365235
Alignment:
Q  56 gaatttatggaaataagctgaaaacaatttatgaacaatatcataagctgttttcata-gttctcccaaacaatctcacaaaatttatgccggtagataa 154  Q
    ||||||||| |||| || ||||||  ||||||||| | | ||||||||||| |||||| ||||||||||||| | |||||||| |||||||  |||||||    
T  31365350 gaatttatgaaaatgagttgaaaaagatttatgaaaattgtcataagctgtattcataagttctcccaaacagtgtcacaaaaattatgccaatagataa 31365251  T
Q  155 actcaaataagtcaat 170  Q
    ||||||||||| ||||    
T  31365250 actcaaataagccaat 31365235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 69 - 169
Target Start/End: Complemental strand, 402570 - 402469
Alignment:
Q  69 taagctgaaaacaatttatgaacaatatcataagctgttttcata-gttctcccaaacaatctcacaaaatttatgccggtagataaactcaaataagtc 167  Q
    |||||||||||||  ||||||||||| |||||||||||||||||| ||||||||||||| |||  ||||| |||||   || |||||||||||||| |||    
T  402570 taagctgaaaacagcttatgaacaatgtcataagctgttttcatacgttctcccaaacagtcttgcaaaacttatgttagttgataaactcaaataggtc 402471  T
Q  168 aa 169  Q
    ||    
T  402470 aa 402469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 30 - 171
Target Start/End: Complemental strand, 39602280 - 39602136
Alignment:
Q  30 tataagctgttttcacaagctatctg---gaatttatggaaataagctgaaaacaatttatgaacaatatcataagctgttttcat-agttctcccaaac 125  Q
    ||||||||||||||| |||||||||    ||| ||||| ||||||| |||||||||||||||||| || ||||||||||| ||||| || ||| |||||     
T  39602280 tataagctgttttcataagctatctttgagaacttatgaaaataagttgaaaacaatttatgaac-atgtcataagctgtcttcataagctcttccaaat 39602182  T
Q  126 aatctcacaaaatttatgccggtagataaactcaaataagtcaatt 171  Q
    |  ||||||||| | ||||| |||| ||| |||||||||| |||||    
T  39602181 agcctcacaaaactgatgccagtagctaagctcaaataagccaatt 39602136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 58 - 170
Target Start/End: Complemental strand, 31365227 - 31365114
Alignment:
Q  58 atttatggaaataagctgaaaacaatttatgaacaatatcataagctgttttcata-gttctcccaaacaatctcacaaaatttatgccggtagataaac 156  Q
    ||||||| |||| || |||||| |  ||||||| | | |||||||||| ||||||| ||||||||||||| |||||||||| |||||||  ||||||| |    
T  31365227 atttatgaaaatgagttgaaaaaagcttatgaaaattgtcataagctgctttcataagttctcccaaacagtctcacaaaacttatgccaatagataagc 31365128  T
Q  157 tcaaataagtcaat 170  Q
    ||||||||| ||||    
T  31365127 tcaaataagccaat 31365114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 65 - 165
Target Start/End: Complemental strand, 46778223 - 46778122
Alignment:
Q  65 gaaataagctgaaaacaatttatgaacaatatcataagctgttttcata-gttctcccaaacaatctcacaaaatttatgccggtagataaactcaaata 163  Q
    ||||||||||||| | || ||||||| ||| ||||||| |||||||||| ||||||||||||  | ||||||||||||||||  || |||| ||||||||    
T  46778223 gaaataagctgaacaaaacttatgaaaaatgtcataagttgttttcataagttctcccaaacggtttcacaaaatttatgccactaaataagctcaaata 46778124  T
Q  164 ag 165  Q
    ||    
T  46778123 ag 46778122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 29 - 164
Target Start/End: Complemental strand, 46886763 - 46886624
Alignment:
Q  29 ctataagctgttttcacaagctatctgg---aatttatggaaataagctgaaaacaatttatgaacaatatcataagctgttttcat-agttctcccaaa 124  Q
    |||||||||||||||| ||||||||| |   || || || |||||| ||||| | || ||| |||||||  |||||||||||||||| || || ||||||    
T  46886763 ctataagctgttttcataagctatcttggagaacttttgaaaataacctgaacataacttacgaacaatgccataagctgttttcatcagctcacccaaa 46886664  T
Q  125 caatctcacaaaatttatgccggtagataaactcaaataa 164  Q
    || |||| ||||||||||||| | |||||| |||||||||    
T  46886663 cagtctctcaaaatttatgccagcagataagctcaaataa 46886624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 66 - 177
Target Start/End: Original strand, 26878239 - 26878351
Alignment:
Q  66 aaataagctgaaaacaatttatgaacaatatcataagctgttttca-tagttctcccaaacaatctcacaaaatttatgccggtagataaactcaaataa 164  Q
    |||||||||||||||| |||||||||||| ||||||||| ||||||  ||||||| |||||| | ||||  || ||||| | |||||||| ||| |||||    
T  26878239 aaataagctgaaaacagtttatgaacaatgtcataagctattttcacaagttctctcaaacagtttcacgcaacttatgtcagtagataagctcgaataa 26878338  T
Q  165 gtcaatttaaaca 177  Q
    | ||||| |||||    
T  26878339 gccaattcaaaca 26878351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 60 - 167
Target Start/End: Complemental strand, 34610843 - 34610735
Alignment:
Q  60 ttatggaaataagctgaaaacaatttatgaacaatatcataagctgttttcat-agttctcccaaacaatctcacaaaatttatgccggtagataaactc 158  Q
    ||||| |||| |||||||||| | ||||||||||| |||||||| |||||||| |||||||||||| | |   |||||| ||||| | |||||||| |||    
T  34610843 ttatgaaaatcagctgaaaaccacttatgaacaatgtcataagcagttttcataagttctcccaaatagttgtacaaaacttatgtcagtagataagctc 34610744  T
Q  159 aaataagtc 167  Q
    |||||||||    
T  34610743 aaataagtc 34610735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 60 - 162
Target Start/End: Original strand, 30443926 - 30444029
Alignment:
Q  60 ttatggaaataagctgaaaacaatttatgaacaatatcataagctgttttcata-gttctcccaaacaatctcacaaaatttatgccggtagataaactc 158  Q
    ||||| |||||||||||||| |  || |||| | | |||||||||||||||||| | ||| ||||||| |||||| ||||||||||| |||||||| |||    
T  30443926 ttatgaaaataagctgaaaaaagcttgtgaaaattgtcataagctgttttcataagctctaccaaacagtctcaccaaatttatgccagtagataagctc 30444025  T
Q  159 aaat 162  Q
    ||||    
T  30444026 aaat 30444029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 29 - 170
Target Start/End: Complemental strand, 25447315 - 25447171
Alignment:
Q  29 ctataagctgttttcacaagctatctggaatt--tatggaaataagctgaaaacaatttatgaacaatatcataagctgttttcata-gttctcccaaac 125  Q
    |||||| ||||||||| ||||||||| || ||  ||||  || ||||||||||||  || ||||||||  ||||| ||| || | || |||||  |||||    
T  25447315 ctataaactgttttcataagctatcttgatttcttatgagaaaaagctgaaaacagcttgtgaacaatggcataaactgcttccgtatgttcttgcaaac 25447216  T
Q  126 aatctcacaaaatttatgccggtagataaactcaaataagtcaat 170  Q
    | |||||||||| ||||| | ||||||||||||||||||||||||    
T  25447215 agtctcacaaaacttatgtcagtagataaactcaaataagtcaat 25447171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 96 - 170
Target Start/End: Original strand, 20257605 - 20257681
Alignment:
Q  96 tcataagctgttttcata-gttctcccaaacaatctcacaaaatttatgccggtagat-aaactcaaataagtcaat 170  Q
    |||| ||||| ||||||| ||||||||||||| |||||||||||||||| | |||||| ||||||||||||| ||||    
T  20257605 tcattagctgctttcataagttctcccaaacagtctcacaaaatttatggctgtagataaaactcaaataagccaat 20257681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 96 - 169
Target Start/End: Complemental strand, 3776392 - 3776317
Alignment:
Q  96 tcataagctgttttcata-gttctcccaaacaatctcacaaa-atttatgccggtagataaactcaaataagtcaa 169  Q
    |||||||||||||||||| |||||| |||||| ||||||||  | ||||||| ||||||||||||||| |||||||    
T  3776392 tcataagctgttttcataagttctctcaaacattctcacaattacttatgccagtagataaactcaaacaagtcaa 3776317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 69 - 177
Target Start/End: Complemental strand, 33046829 - 33046717
Alignment:
Q  69 taagctgaaaacaatttatgaacaatatcataagctgttttcata-gttctcccaaacaatctc---acaaaatttatgccggtagataaactcaaataa 164  Q
    |||||||||||||| |||||| |||| ||| ||  ||||||| || || |||||||||| ||||   |||||| ||||||| ||||||||||| ||||||    
T  33046829 taagctgaaaacaacttatgaccaatgtcagaaattgttttcgtaagtcctcccaaacagtctcgcaacaaaacttatgccagtagataaactaaaataa 33046730  T
Q  165 gtcaatttaaaca 177  Q
    | ||||| |||||    
T  33046729 gccaattcaaaca 33046717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 94 - 170
Target Start/End: Complemental strand, 22969 - 22892
Alignment:
Q  94 tatcataagctgttttcatag-ttctcccaaacaatctcacaaaatttatgccggtagataaactcaaataagtcaat 170  Q
    |||| |||||||||||||||  |||||| |||||||||||||||| ||||||| ||||| ||  ||||||||| ||||    
T  22969 tatcgtaagctgttttcataacttctcctaaacaatctcacaaaacttatgccagtagacaagttcaaataagccaat 22892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 61 - 170
Target Start/End: Original strand, 26911619 - 26911735
Alignment:
Q  61 tatggaaataagctgaaaacaatttatgaacaatatcataagctgttttcata-gttctcccaaacaatctcac------aaaatttatgccggtagata 153  Q
    |||||||||||| |||||| || ||||||| | | ||||||||||||||||||  || ||||||||  ||||||      |||| ||||| | |||||||    
T  26911619 tatggaaataagttgaaaaaaacttatgaaaattgtcataagctgttttcatatattatcccaaacggtctcacaaaacaaaaacttatgtcagtagata 26911718  T
Q  154 aactcaaataagtcaat 170  Q
    |||||||||||||||||    
T  26911719 aactcaaataagtcaat 26911735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 89 - 170
Target Start/End: Complemental strand, 26990232 - 26990151
Alignment:
Q  89 aacaatatcataagctgttttcatagttctcccaaacaatctcacaaaatttatgccggtagataaactcaaataagtcaat 170  Q
    |||| ||||||| ||||||||  ||||||||||||||||| || ||||   |||| | |||||||| |||||||||||||||    
T  26990232 aacagtatcatatgctgttttattagttctcccaaacaatatcgcaaagcctatgtcagtagataagctcaaataagtcaat 26990151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 98 - 138
Target Start/End: Complemental strand, 34637984 - 34637943
Alignment:
Q  98 ataagctgttttcata-gttctcccaaacaatctcacaaaat 138  Q
    |||||||||||||||| |||||||||||||||||||||||||    
T  34637984 ataagctgttttcataagttctcccaaacaatctcacaaaat 34637943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 66 - 170
Target Start/End: Original strand, 46031029 - 46031134
Alignment:
Q  66 aaataagctgaaaacaatttatgaacaatatcataagctgttttcat-agttctcccaaacaatctcacaaaatttatgccggtagataaactcaaataa 164  Q
    ||||||||||||||||  ||||||| ||| ||||| ||||||||| | |||||||  ||||| ||||| |||| ||||  |  |||||||||||||||||    
T  46031029 aaataagctgaaaacagcttatgaataatgtcataggctgttttcgtaagttctctgaaacagtctcataaaacttataacaatagataaactcaaataa 46031128  T
Q  165 gtcaat 170  Q
    | ||||    
T  46031129 gccaat 46031134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 99 - 170
Target Start/End: Original strand, 584118 - 584190
Alignment:
Q  99 taagctgttttcatag-ttctcccaaacaatctcacaaaatttatgccggtagataaactcaaataagtcaat 170  Q
    |||||||||||||||  |||||| ||||| ||||||| || ||||||  |||||||| |||||||||||||||    
T  584118 taagctgttttcataaattctccaaaacagtctcacagaacttatgctagtagataagctcaaataagtcaat 584190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 96 - 163
Target Start/End: Original strand, 22203499 - 22203566
Alignment:
Q  96 tcataagctgttttcata-gttctcccaaacaatctcacaaaatttatgccggtagataaactcaaata 163  Q
    |||||||||||||||||| ||||||| ||||| |||||||||||| ||| |||||||||| ||| ||||    
T  22203499 tcataagctgttttcataagttctcc-aaacagtctcacaaaattaatgtcggtagataagctcgaata 22203566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 84 - 170
Target Start/End: Original strand, 5436129 - 5436216
Alignment:
Q  84 ttatgaacaatatcataagctgttttcata-gttctcccaaacaatctcacaaaatttatgccggtagataaactcaaataagtcaat 170  Q
    ||||||||||| ||||||| |||||||| | ||||| | ||||| | |||||||| ||||| | || |||||||||||||||| ||||    
T  5436129 ttatgaacaatgtcataagttgttttcagaagttcttcaaaacagtgtcacaaaacttatgacagttgataaactcaaataagccaat 5436216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 60 - 170
Target Start/End: Original strand, 20880509 - 20880620
Alignment:
Q  60 ttatggaaataagctgaaaacaatttatgaacaatatcataagctgttttcata-gttctcccaaacaatctcacaaaatttatgccggtagataaactc 158  Q
    ||||| ||||||||| |||| |  ||||||| | | |||||||||||||||||| ||||||||||| | ||| |  ||| ||||||  |||||||| |||    
T  20880509 ttatgaaaataagctcaaaaaagcttatgaaaattgtcataagctgttttcataggttctcccaaatagtctaaggaaacttatgcaagtagataagctc 20880608  T
Q  159 aaataagtcaat 170  Q
    ||||||| ||||    
T  20880609 aaataagccaat 20880620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 96 - 170
Target Start/End: Original strand, 39980798 - 39980873
Alignment:
Q  96 tcataagctgttttcat-agttctcccaaacaatctcacaaaatttatgccggtagataaactcaaataagtcaat 170  Q
    ||||||||||||||||| |||||||  ||||| |||||||||| ||||||  |||||||| |||||| ||| ||||    
T  39980798 tcataagctgttttcataagttctcttaaacagtctcacaaaacttatgctagtagataagctcaaacaagccaat 39980873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 60 - 134
Target Start/End: Original strand, 50952366 - 50952440
Alignment:
Q  60 ttatggaaataagctgaaaacaatttatgaacaatatcataagctgttttcata-gttctcccaaacaatctcaca 134  Q
    ||||||||||||||| |||||| ||||||||| || ||||||||||||||| || |||||| | |||| |||||||    
T  50952366 ttatggaaataagcttaaaacagtttatgaac-atgtcataagctgttttcgtacgttctctcgaacagtctcaca 50952440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 68 - 177
Target Start/End: Complemental strand, 9832784 - 9832674
Alignment:
Q  68 ataagctgaaaacaatttatgaacaatatcataagctgttttcata-gttctcccaaacaatctcacaaaatttatgccggtagataaactcaaataagt 166  Q
    ||||| |||||| | |||||||| ||   ||||||||||||||| | ||||||||||||| | | |||||| ||||| |  || |||| |||||||||||    
T  9832784 ataagttgaaaaaagtttatgaaaaaaggcataagctgttttcaaaagttctcccaaacagtttgacaaaacttatgtcaataaataagctcaaataagt 9832685  T
Q  167 caatttaaaca 177  Q
    |||| ||||||    
T  9832684 caatctaaaca 9832674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 56 - 137
Target Start/End: Original strand, 26878146 - 26878228
Alignment:
Q  56 gaatttatggaaataagctgaaaacaatttatgaacaatatcataagctgttttca-tagttctcccaaacaatctcacaaaa 137  Q
    ||||| ||| ||||| |||||||||| |||||||||||| |||| | || ||||||  | |||||||||||| ||||||||||    
T  26878146 gaattaatgaaaatatgctgaaaacagtttatgaacaatgtcattaactattttcacaaattctcccaaacagtctcacaaaa 26878228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 66 - 169
Target Start/End: Complemental strand, 42747814 - 42747709
Alignment:
Q  66 aaataagctgaaaacaatttatgaacaatatcataa-gctgttttcata-gttctcccaaacaatctcacaaaatttatgccggtagataaactcaaata 163  Q
    |||||||  |||||||  |||| |||||| |||||| | |||||||||| ||||||  ||||| |||||||| | |||||   |||||||||||||||||    
T  42747814 aaataaggagaaaacagcttataaacaatgtcataaagttgttttcataagttctcaaaaacagtctcacaatacttatggaagtagataaactcaaata 42747715  T
Q  164 agtcaa 169  Q
    ||||||    
T  42747714 agtcaa 42747709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 59 - 134
Target Start/End: Complemental strand, 23808102 - 23808027
Alignment:
Q  59 tttatggaaataagctgaaaacaatttatgaacaatatcataagctgttttcat-agttctcccaaacaatctcaca 134  Q
    |||||| ||||||| |||||||||||| ||||| || |||||||||| |||||| |||| ||||||||  |||||||    
T  23808102 tttatgaaaataagatgaaaacaatttgtgaac-atgtcataagctgctttcataagttttcccaaaccgtctcaca 23808027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 146 - 178
Target Start/End: Original strand, 28779439 - 28779471
Alignment:
Q  146 ggtagataaactcaaataagtcaatttaaacaa 178  Q
    |||||||||||||||||||||||||| ||||||    
T  28779439 ggtagataaactcaaataagtcaattcaaacaa 28779471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 60 - 170
Target Start/End: Original strand, 32582777 - 32582881
Alignment:
Q  60 ttatggaaataagctgaaaacaatttatgaacaatatcataagctgttttcat-agttctcccaaacaatctcacaaaatttatgccggtagataaactc 158  Q
    ||||||||||||| |||||| |  || |||||||| |||    |||||||||| |||||||||||||| |||   |||| |||||   ||||||||||||    
T  32582777 ttatggaaataagttgaaaaaatcttttgaacaatgtca----ctgttttcatgagttctcccaaacagtct---aaaacttatggtagtagataaactc 32582869  T
Q  159 aaataagtcaat 170  Q
    ||||||||||||    
T  32582870 aaataagtcaat 32582881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 31 - 133
Target Start/End: Original strand, 37273135 - 37273240
Alignment:
Q  31 ataagctgttttcacaagctatctgg---aatttatggaaataagctgaaaacaatttatgaacaatatcataagctgttttcat-agttctcccaaaca 126  Q
    |||| ||||||||| ||||||||| |   || ||||||||||||| ||||||||| ||||| || || ||||||| ||||| ||| || |||||||||||    
T  37273135 ataaactgttttcataagctatcttggagaacttatggaaataagttgaaaacaacttatggac-atgtcataagttgtttccataagctctcccaaaca 37273233  T
Q  127 atctcac 133  Q
     ||||||    
T  37273234 gtctcac 37273240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 60 - 135
Target Start/End: Original strand, 43115089 - 43115164
Alignment:
Q  60 ttatggaaataagctgaaaacaatttatgaacaatatcataagctgttttcat-agttctcccaaacaatctcacaa 135  Q
    ||||||||||||||||||||||| ||||| || || ||||||| ||||| ||| |  ||| ||||||||||||||||    
T  43115089 ttatggaaataagctgaaaacaagttatggac-atgtcataagttgtttccataaactcttccaaacaatctcacaa 43115164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 96 - 170
Target Start/End: Complemental strand, 44014800 - 44014724
Alignment:
Q  96 tcataagctgttttcata-gttctcccaaacaatctcacaaaa-tttatgccggtagataaactcaaataagtcaat 170  Q
    |||||||||||||||||| ||| || |||||| ||||||||   |||||||  ||||||||||||||||||| ||||    
T  44014800 tcataagctgttttcataagttttctcaaacagtctcacaagtgtttatgctagtagataaactcaaataagccaat 44014724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 60 - 92
Target Start/End: Complemental strand, 45432976 - 45432944
Alignment:
Q  60 ttatggaaataagctgaaaacaatttatgaaca 92  Q
    ||||||||||||||||||||||| |||||||||    
T  45432976 ttatggaaataagctgaaaacaacttatgaaca 45432944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 60 - 92
Target Start/End: Original strand, 45555009 - 45555041
Alignment:
Q  60 ttatggaaataagctgaaaacaatttatgaaca 92  Q
    |||||||||||||||||||||| ||||||||||    
T  45555009 ttatggaaataagctgaaaacattttatgaaca 45555041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 57; Significance: 7e-24; HSPs: 45)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 32 - 170
Target Start/End: Original strand, 39594809 - 39594951
Alignment:
Q  32 taagctgttttcacaagctatctgg---aatttatggaaataagctgaaaacaatttatgaacaatatcataagctgttttcata-gttctcccaaacaa 127  Q
    ||||||||||||| ||| ||||| |   || ||||| ||||||||||||||||| |||  |||| |||| | ||||||||||||| ||| ||||||||||    
T  39594809 taagctgttttcataagatatcttgttgaacttatgaaaataagctgaaaacaacttaataacattatcttcagctgttttcataagttgtcccaaacaa 39594908  T
Q  128 tctcacaaaatttatgccggtagataaactcaaataagtcaat 170  Q
    ||| |||||| ||||| |||||||||| |||||||||||||||    
T  39594909 tctaacaaaacttatgtcggtagataagctcaaataagtcaat 39594951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 29 - 177
Target Start/End: Original strand, 7984968 - 7985120
Alignment:
Q  29 ctataagctgttttcacaagctatctgg---aatttatggaaataagctgaaaacaatttatgaacaatatcataagctgttttcat-agttctcccaaa 124  Q
    ||||||||| |||||| ||||||||| |   |||||||| ||||||||||||||||  ||||||||||  ||| ||||||||||| | || |||||||||    
T  7984968 ctataagcttttttcataagctatcttggagaatttatgaaaataagctgaaaacagcttatgaacaacgtcacaagctgttttcttaagctctcccaaa 7985067  T
Q  125 caatctcacaaaatttatgccggtagataaactcaaataagtcaatttaaaca 177  Q
     | |||||||||  ||||||| |||||||| ||||||| || |||| ||||||    
T  7985068 tagtctcacaaagcttatgccagtagataatctcaaattagccaatctaaaca 7985120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 84 - 165
Target Start/End: Original strand, 10640010 - 10640092
Alignment:
Q  84 ttatgaacaatatcataagctgttttcata-gttctcccaaacaatctcacaaaatttatgccggtagataaactcaaataag 165  Q
    ||||||| ||| |||||||||||||||||| ||||||||||||||| |||||||| ||||| | |||||||||||||||||||    
T  10640010 ttatgaaaaatgtcataagctgttttcataagttctcccaaacaatatcacaaaacttatgtcagtagataaactcaaataag 10640092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 29 - 169
Target Start/End: Original strand, 12425570 - 12425716
Alignment:
Q  29 ctataagctgttttcacaagctatctgg---aatttatggaaataagctgaaaacaatttatgaacaatatcataagctgttttcata---gttctccca 122  Q
    |||||||||||||||||||||||||| |   || ||||| ||||||| ||||||||| ||||  ||||| |  || | ||||||||||   |||||||||    
T  12425570 ctataagctgttttcacaagctatcttggagaacttatgaaaataagttgaaaacaacttattgacaatgttttaggttgttttcatataagttctccca 12425669  T
Q  123 aacaatctcacaaaatttatgccggtagataaactcaaataagtcaa 169  Q
    |||| |||||||||| ||||| | |||||||| ||||||||||||||    
T  12425670 aacagtctcacaaaacttatgacagtagataagctcaaataagtcaa 12425716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 65 - 170
Target Start/End: Original strand, 41419357 - 41419463
Alignment:
Q  65 gaaataagctgaaaacaatttatgaacaatatcataagctgttttcata-gttctcccaaacaatctcacaaaatttatgccggtagataaactcaaata 163  Q
    ||||||| ||||||| |  | ||||||||| |||||||||||||||| | ||| |||||||||||||||||||||||||| | |||||| | ||||||||    
T  41419357 gaaataatctgaaaatagctcatgaacaatgtcataagctgttttcacaagttatcccaaacaatctcacaaaatttatgtcagtagattagctcaaata 41419456  T
Q  164 agtcaat 170  Q
    |||||||    
T  41419457 agtcaat 41419463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 29 - 170
Target Start/End: Original strand, 39105463 - 39105609
Alignment:
Q  29 ctataagctgttttcacaagctatctgg---aatttatggaaataagctgaaaacaatttatgaacaatatcataagctgttttcat-agttctcccaaa 124  Q
    |||||| ||||||||| ||||||||| |   || ||||| ||||||||| |||| |  ||||||||||| ||||||||||||||||| | ||||||||||    
T  39105463 ctataatctgttttcataagctatcttggagaacttatgaaaataagctaaaaatagcttatgaacaatgtcataagctgttttcataaattctcccaaa 39105562  T
Q  125 caa-tctcacaaaatttatgccggtagataaactcaaataagtcaat 170  Q
     || ||||| |||| |||| ||  |||||||||||||||||||||||    
T  39105563 aaagtctcataaaacttatacccctagataaactcaaataagtcaat 39105609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 88 - 170
Target Start/End: Original strand, 11064727 - 11064810
Alignment:
Q  88 gaacaatatcataagctgttttcata-gttctcccaaacaatctcacaaaatttatgccggtagataaactcaaataagtcaat 170  Q
    ||||||| ||||||||| |||||||| |||||| ||||||||||||||||| |||||  ||||||||||||||||||| |||||    
T  11064727 gaacaatgtcataagctattttcataagttctctcaaacaatctcacaaaacttatgttggtagataaactcaaataaatcaat 11064810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 66 - 182
Target Start/End: Complemental strand, 1465051 - 1464934
Alignment:
Q  66 aaataagctgaaaacaatttatgaacaatatcataagctgttttcat-agttctcccaaacaatctcacaaaatttatgccggtagataaactcaaataa 164  Q
    ||||||||||||||||| |||||| ||||  |||||||||||||||| ||||||||| |||| |||| || || ||||||  | || ||| |||||||||    
T  1465051 aaataagctgaaaacaacttatgagcaatgccataagctgttttcataagttctcccgaacagtctcgcagaacttatgctagaagctaagctcaaataa 1464952  T
Q  165 gtcaatttaaacaatttc 182  Q
    ||||||| ||||| ||||    
T  1464951 gtcaattcaaacagtttc 1464934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 31 - 170
Target Start/End: Complemental strand, 9202817 - 9202674
Alignment:
Q  31 ataagctgttttcacaagctatctggaat---ttatggaaataagctgaaaacaatttatgaacaatatcataagctgttttca-tagttctcccaaaca 126  Q
    |||||||||||||| ||| ||||| |||    ||||| |||||||||| |||||  ||||||||||| ||||||||||||| || ||||| ||| ||| |    
T  9202817 ataagctgttttcataagttatcttgaagaacttatgaaaataagctggaaacagcttatgaacaatgtcataagctgtttccattagttttccgaaata 9202718  T
Q  127 atctcacaaaatttatgccggtagataaactcaaataagtcaat 170  Q
     ||| |||||| ||||||| | |||||| |||||||||||||||    
T  9202717 gtcttacaaaacttatgccaggagataagctcaaataagtcaat 9202674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 99 - 170
Target Start/End: Original strand, 9107162 - 9107234
Alignment:
Q  99 taagctgttttcat-agttctcccaaacaatctcacaaaatttatgccggtagataaactcaaataagtcaat 170  Q
    |||||||||||||| |||||||||||||| |||||||||| ||||| |  |||||||||||||||||||||||    
T  9107162 taagctgttttcatgagttctcccaaacattctcacaaaacttatgtcactagataaactcaaataagtcaat 9107234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 65 - 170
Target Start/End: Original strand, 41534479 - 41534582
Alignment:
Q  65 gaaataagctgaaaacaatttatgaacaatatcataagctgttttcata-gttctcccaaacaatctcacaaaatttatgccggtagataaactcaaata 163  Q
    ||||||| |||||||||  ||||||||    |||||||||||||||| | ||| |||||||||||||||||||||||||| | |||||| | ||||||||    
T  41534479 gaaataatctgaaaacagcttatgaacg---tcataagctgttttcacaagttatcccaaacaatctcacaaaatttatgtcagtagattagctcaaata 41534575  T
Q  164 agtcaat 170  Q
    |||||||    
T  41534576 agtcaat 41534582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 66 - 170
Target Start/End: Complemental strand, 16937914 - 16937809
Alignment:
Q  66 aaataagctgaaaacaatttatgaacaatatcataagctgttttcat-agttctcccaaacaatctcacaaaatttatgccggtagataaactcaaataa 164  Q
    |||||||||||||| |  |||||||   | ||||||||||||||||| |||||| ||||||| |||||||||| ||||||  |||||||| |||||||||    
T  16937914 aaataagctgaaaaaagcttatgaaatttgtcataagctgttttcataagttcttccaaacactctcacaaaacttatgctagtagataagctcaaataa 16937815  T
Q  165 gtcaat 170  Q
    | ||||    
T  16937814 gccaat 16937809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 60 - 165
Target Start/End: Original strand, 11700196 - 11700301
Alignment:
Q  60 ttatggaaataagctgaaaacaatttatgaacaatatcataagctgttttcat-agttctcccaaacaatctcacaaaatttatgccggtagataaactc 158  Q
    ||||| ||||||| ||||| ||||||||||||||| ||||||| ||||| ||| ||||||   ||||| |||||||||| ||||||| || ||||| |||    
T  11700196 ttatgaaaataagatgaaa-caatttatgaacaatgtcataagttgtttccataagttctgtgaaacagtctcacaaaacttatgccagtggataagctc 11700294  T
Q  159 aaataag 165  Q
    |||||||    
T  11700295 aaataag 11700301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 113 - 162
Target Start/End: Complemental strand, 19460309 - 19460260
Alignment:
Q  113 agttctcccaaacaatctcacaaaatttatgccggtagataaactcaaat 162  Q
    ||||||||||||||||||||| ||| ||||||| ||||||||||||||||    
T  19460309 agttctcccaaacaatctcactaaacttatgccagtagataaactcaaat 19460260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 59 - 126
Target Start/End: Complemental strand, 499769 - 499702
Alignment:
Q  59 tttatggaaataagctgaaaacaatttatgaacaatatcataagctgttttcat-agttctcccaaaca 126  Q
    |||||||||||||||||||||||| || | ||| || ||||||||||||||||| ||||||||||||||    
T  499769 tttatggaaataagctgaaaacaacttgttaac-atgtcataagctgttttcataagttctcccaaaca 499702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 66 - 169
Target Start/End: Original strand, 40426804 - 40426908
Alignment:
Q  66 aaataagctgaaaacaatttatgaacaatatcataagctgttttcata-gttctcccaaacaatctcacaaaatttatgccggtagataaactcaaataa 164  Q
    ||||||||| |||| |  ||||||| |||  ||||||||||||||||| |  | |||||||| |||||||||||||||| |  ||||||| |||||||||    
T  40426804 aaataagcttaaaaaagcttatgaaaaatggcataagctgttttcataagcacccccaaacagtctcacaaaatttatgtcattagataagctcaaataa 40426903  T
Q  165 gtcaa 169  Q
    |||||    
T  40426904 gtcaa 40426908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 66 - 113
Target Start/End: Original strand, 4625767 - 4625814
Alignment:
Q  66 aaataagctgaaaacaatttatgaacaatatcataagctgttttcata 113  Q
    ||||||| |||||||||| |||||||||| ||||||||||||||||||    
T  4625767 aaataagttgaaaacaatgtatgaacaatttcataagctgttttcata 4625814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 56 - 170
Target Start/End: Original strand, 6096576 - 6096691
Alignment:
Q  56 gaatttatggaaataagctgaaaacaatttatgaacaatatcataagctgttttcat-agttctcccaaacaatctcacaaaatttatgccggtagataa 154  Q
    ||||||||| |||| |||||| ||||  ||||||||||| ||| ||||||||| | | |||||| || || | |||||||||| ||||||| ||||||||    
T  6096576 gaatttatgaaaatgagctgagaacagcttatgaacaatgtcacaagctgtttacgtaagttcttcctaaaagtctcacaaaacttatgccagtagataa 6096675  T
Q  155 actcaaataagtcaat 170  Q
      ||||||| ||||||    
T  6096676 gttcaaatacgtcaat 6096691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 60 - 165
Target Start/End: Original strand, 42100344 - 42100450
Alignment:
Q  60 ttatggaaataagctgaaaacaatttatgaacaatatcataagctgttttcata-gttctcccaaacaatctcacaaaatttatgccggtagataaactc 158  Q
    ||||| ||||||| ||||||||  || ||||| || ||||||||| |||||| | |||||| || ||| || |||||||||||||||  ||||||| |||    
T  42100344 ttatgaaaataagatgaaaacaccttttgaactatgtcataagctattttcacaagttctctcacacagtcacacaaaatttatgccaatagataagctc 42100443  T
Q  159 aaataag 165  Q
    |||||||    
T  42100444 aaataag 42100450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 76 - 177
Target Start/End: Complemental strand, 42583363 - 42583261
Alignment:
Q  76 aaaacaatttatgaacaatatcataagctgttttca-tagttctcccaaacaatctcacaaaatttatgccggtagataaactcaaataagtcaatttaa 174  Q
    ||||||| ||||||||||| | |||| ||||||||| |||||||||||||||  ||| ||||||||||| | || || |  ||||| |||||||||| ||    
T  42583363 aaaacaacttatgaacaatgttataaactgttttcattagttctcccaaacagcctcgcaaaatttatgtcagtggacacgctcaagtaagtcaattcaa 42583264  T
Q  175 aca 177  Q
    |||    
T  42583263 aca 42583261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 56 - 109
Target Start/End: Original strand, 1899183 - 1899235
Alignment:
Q  56 gaatttatggaaataagctgaaaacaatttatgaacaatatcataagctgtttt 109  Q
    ||||||||||||||||||||||||||| ||||| || || ||||||||||||||    
T  1899183 gaatttatggaaataagctgaaaacaacttatgcac-atgtcataagctgtttt 1899235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 60 - 113
Target Start/End: Original strand, 8334604 - 8334657
Alignment:
Q  60 ttatggaaataagctgaaaacaatttatgaacaatatcataagctgttttcata 113  Q
    ||||| |||||||||||||||||||||||||  || ||||||||| ||||||||    
T  8334604 ttatgaaaataagctgaaaacaatttatgaaatatgtcataagctattttcata 8334657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 60 - 160
Target Start/End: Complemental strand, 19460423 - 19460323
Alignment:
Q  60 ttatggaaataagctgaaaacaatttatgaacaatatcataagctgttttc-atagttctcccaaacaatctcacaaaatttatgccggtagataaactc 158  Q
    ||||| ||||||||||||| ||  ||||||| ||||||||||| ||||| | | |||||||| ||||| |||||| ||| ||||||| ||||||| ||||    
T  19460423 ttatgaaaataagctgaaa-cagcttatgaaaaatatcataagttgtttccaaaagttctcctaaacagtctcactaaacttatgccagtagatagactc 19460325  T
Q  159 aa 160  Q
    ||    
T  19460324 aa 19460323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 66 - 137
Target Start/End: Complemental strand, 16458010 - 16457938
Alignment:
Q  66 aaataagctgaaaacaatttatgaacaatatcataagctgttttcata-gttctcccaaacaatctcacaaaa 137  Q
    |||||| ||||||| |  ||||||| | | |||||||||||||||||| ||||||||||||| ||||||||||    
T  16458010 aaataaactgaaaagagcttatgaaaactgtcataagctgttttcataagttctcccaaacagtctcacaaaa 16457938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 60 - 135
Target Start/End: Complemental strand, 17258920 - 17258845
Alignment:
Q  60 ttatggaaataagctgaaaacaatttatgaacaatatcataagctgttttcata-gttctcccaaacaatctcacaa 135  Q
    ||||| ||||||||||||||||  |||||||| || ||||||||| |||||||| ||||||||||| ||| ||||||    
T  17258920 ttatgaaaataagctgaaaacagcttatgaac-atgtcataagctattttcataggttctcccaaagaatgtcacaa 17258845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 68 - 143
Target Start/End: Original strand, 42228080 - 42228156
Alignment:
Q  68 ataagctgaaaacaatttatgaacaatatcataagctgttttcata-gttctcccaaacaatctcacaaaatttatg 143  Q
    ||||||| ||||||| |||  |||||| || |||||||||| |||| |||||||||||||||||||| ||| |||||    
T  42228080 ataagctaaaaacaacttactaacaatgtcttaagctgtttccataagttctcccaaacaatctcacgaaacttatg 42228156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 56 - 170
Target Start/End: Original strand, 7674677 - 7674791
Alignment:
Q  56 gaatttatggaaataagctgaaaacaatttatgaacaatatcataagctgttttcat-agttctcccaaacaatctcacaaaatttatgccggtagataa 154  Q
    |||||| || ||||||||||||||||  |||| ||| || ||||||| ||||| ||| |||||| |||| || |||||||||| ||| |  |||||||||    
T  7674677 gaatttgtgaaaataagctgaaaacaccttataaac-atgtcataagttgtttccataagttcttccaagcagtctcacaaaacttaagtaggtagataa 7674775  T
Q  155 actcaaataagtcaat 170  Q
     |||||||||| ||||    
T  7674776 gctcaaataagccaat 7674791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 96 - 170
Target Start/End: Complemental strand, 7705999 - 7705924
Alignment:
Q  96 tcataagctgttttcata-gttctcccaaacaatctcacaaaatttatgccggtagataaactcaaataagtcaat 170  Q
    |||||||||||||||||| ||||||||||| |   |||||||| ||||||  |||||||  |||||||||||||||    
T  7705999 tcataagctgttttcataagttctcccaaagagcgtcacaaaacttatgctagtagatatgctcaaataagtcaat 7705924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 66 - 132
Target Start/End: Original strand, 7808544 - 7808611
Alignment:
Q  66 aaataagctgaaaacaatttatgaacaatatcataagctgttttcat-agttctcccaaacaatctca 132  Q
    ||||||||||||||||  ||||||||||| | ||||||| ||||||| || ||||||||||| |||||    
T  7808544 aaataagctgaaaacagcttatgaacaatgttataagctattttcataagctctcccaaacagtctca 7808611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 60 - 134
Target Start/End: Original strand, 9106854 - 9106929
Alignment:
Q  60 ttatggaaataagctgaaaacaatttatgaacaatatcataagctgttttcat-agttctcccaaacaatctcaca 134  Q
    ||||||||||||||||||||||  |||||||  | || ||||| ||||||||| |||||| ||||||||| |||||    
T  9106854 ttatggaaataagctgaaaacagcttatgaaatacattataagttgttttcataagttcttccaaacaatgtcaca 9106929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 84 - 170
Target Start/End: Complemental strand, 12433186 - 12433099
Alignment:
Q  84 ttatgaacaatatcataagctgttttcatag-ttctcccaaacaatctcacaaaatttatgccggtagataaactcaaataagtcaat 170  Q
    |||||| |||| || |||||| ||||||||  |||||||||||||||||||||||  |||||| ||| ||||  ||||||||| ||||    
T  12433186 ttatgatcaatgtcgtaagctattttcataacttctcccaaacaatctcacaaaacctatgccagtaaataagttcaaataagccaat 12433099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 74 - 144
Target Start/End: Original strand, 39248146 - 39248216
Alignment:
Q  74 tgaaaacaatttatgaacaatatcataagctgttttcata-gttctcccaaacaatctcacaaaatttatgc 144  Q
    ||||||||  ||||||||||  |||||||||||||| ||| ||||||||||||| |||||||||| ||||||    
T  39248146 tgaaaacagcttatgaacaag-tcataagctgtttttataagttctcccaaacagtctcacaaaacttatgc 39248216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 59 - 113
Target Start/End: Complemental strand, 2880585 - 2880532
Alignment:
Q  59 tttatggaaataagctgaaaacaatttatgaacaatatcataagctgttttcata 113  Q
    |||||||||||||||||||||||  |||||||| ||||||| |||||||| ||||    
T  2880585 tttatggaaataagctgaaaacaccttatgaac-atatcattagctgtttccata 2880532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 60 - 137
Target Start/End: Original strand, 29925874 - 29925952
Alignment:
Q  60 ttatggaaataagctgaaaacaatttatgaacaatatcataagctgttttcat-agttctcccaaacaatctcacaaaa 137  Q
    ||||| ||||||| |||||| ||   ||||||| | ||||||||||||||||| |||||||||||||  ||||||||||    
T  29925874 ttatgaaaataagttgaaaaaaacacatgaacattgtcataagctgttttcataagttctcccaaacggtctcacaaaa 29925952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 84 - 160
Target Start/End: Original strand, 31038341 - 31038418
Alignment:
Q  84 ttatgaacaatatcataagctgttttcata-gttctcccaaacaatctcacaaaatttatgccggtagataaactcaa 160  Q
    ||||||| ||| ||||||||| |||| ||| ||| ||| ||||| | |||||||| |||||||||||||||| |||||    
T  31038341 ttatgaaaaatgtcataagctatttttataagttgtccaaaacagtatcacaaaacttatgccggtagataagctcaa 31038418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 84 - 160
Target Start/End: Original strand, 31047565 - 31047642
Alignment:
Q  84 ttatgaacaatatcataagctgttttcata-gttctcccaaacaatctcacaaaatttatgccggtagataaactcaa 160  Q
    ||||||| ||| ||||||||| |||| ||| ||| ||| ||||| | |||||||| |||||||||||||||| |||||    
T  31047565 ttatgaaaaatgtcataagctatttttataagttgtccaaaacagtatcacaaaacttatgccggtagataagctcaa 31047642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 76 - 113
Target Start/End: Original strand, 39983679 - 39983716
Alignment:
Q  76 aaaacaatttatgaacaatatcataagctgttttcata 113  Q
    ||||||||||||||| ||||||||||| ||||||||||    
T  39983679 aaaacaatttatgaagaatatcataagttgttttcata 39983716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 83 - 154
Target Start/End: Complemental strand, 41981715 - 41981645
Alignment:
Q  83 tttatgaacaatatcataagctgttttcata-gttctcccaaacaatctcacaaaatttatgccggtagataa 154  Q
    |||||||||||| ||||  |||||||||||| ||||||||||||| |||||||||| | ||||  ||||||||    
T  41981715 tttatgaacaatgtcat--gctgttttcataagttctcccaaacagtctcacaaaactaatgctagtagataa 41981645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 96 - 171
Target Start/End: Original strand, 3520646 - 3520722
Alignment:
Q  96 tcataagctgttttcata-gttctcccaaacaatctcacaaaatttatgccggtagataaactcaaataagtcaatt 171  Q
    ||||||| |||||||||| ||||||||||||| ||||||| || |||| |  |||||| | |||||||||| |||||    
T  3520646 tcataagatgttttcataagttctcccaaacagtctcacacaacttatactagtagatgagctcaaataagccaatt 3520722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 30 - 92
Target Start/End: Complemental strand, 14182450 - 14182386
Alignment:
Q  30 tataagctgttttcacaagctatc-tg-gaatttatggaaataagctgaaaacaatttatgaaca 92  Q
    ||||||||||||||| ||| |||| || ||| ||||| ||||||| |||||||||||||||||||    
T  14182450 tataagctgttttcataagttatcctgagaacttatgaaaataagttgaaaacaatttatgaaca 14182386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 113 - 165
Target Start/End: Original strand, 15015930 - 15015982
Alignment:
Q  113 agttctcccaaacaatctcacaaaatttatgccggtagataaactcaaataag 165  Q
    |||||||||||||| |||||||||  ||||| | |||||||| ||||||||||    
T  15015930 agttctcccaaacagtctcacaaagcttatgtcagtagataagctcaaataag 15015982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 60 - 88
Target Start/End: Complemental strand, 19138754 - 19138726
Alignment:
Q  60 ttatggaaataagctgaaaacaatttatg 88  Q
    |||||||||||||||||||||||||||||    
T  19138754 ttatggaaataagctgaaaacaatttatg 19138726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 98 - 165
Target Start/End: Complemental strand, 35445843 - 35445775
Alignment:
Q  98 ataagctgttttcatag-ttctcccaaacaatctcacaaaatttatgccggtagataaactcaaataag 165  Q
    ||||||||||||||||  ||||  |||| | |||||||||| ||||| | |||||||||||||||||||    
T  35445843 ataagctgttttcataaattctgtcaaagagtctcacaaaacttatgtcagtagataaactcaaataag 35445775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 60 - 135
Target Start/End: Complemental strand, 37611252 - 37611177
Alignment:
Q  60 ttatggaaataagctgaaaacaatttatgaacaatatcataagctgttttcat-agttctcccaaacaatctcacaa 135  Q
    |||||||||||| |||||||||  |||||||| || ||| ||| ||||||||| || |||| |||||||||||||||    
T  37611252 ttatggaaataacctgaaaacagcttatgaac-atgtcacaagttgttttcataagctctctcaaacaatctcacaa 37611177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 60 - 135
Target Start/End: Complemental strand, 37787982 - 37787907
Alignment:
Q  60 ttatggaaataagctgaaaacaatttatgaacaatatcataagctgttttcat-agttctcccaaacaatctcacaa 135  Q
    |||||||||||| |||||||||  |||||||| || ||| ||| ||||||||| || |||| |||||||||||||||    
T  37787982 ttatggaaataacctgaaaacagcttatgaac-atgtcacaagttgttttcataagctctctcaaacaatctcacaa 37787907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 52; Significance: 6e-21; HSPs: 38)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 29 - 166
Target Start/End: Original strand, 27028830 - 27028971
Alignment:
Q  29 ctataagctgttttcacaagctatctggaat---ttatggaaataagctgaaaacaatttatgaacaatatcataagctgttttcatagtt-ctcccaaa 124  Q
    |||||||||||||||| ||||||||| | |    ||||| |||||||||||||| |  ||||||| ||| || ||||||||||||| | || ||||||||    
T  27028830 ctataagctgttttcataagctatcttggagagcttatgaaaataagctgaaaatagcttatgaaaaatgtcctaagctgttttcagaatttctcccaaa 27028929  T
Q  125 caatctcacaaaatttatgccggtagataaactcaaataagt 166  Q
    ||||||||| ||| ||||||| || |||||||||||||||||    
T  27028930 caatctcactaaacttatgccagtggataaactcaaataagt 27028971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 61 - 171
Target Start/End: Complemental strand, 32841022 - 32840911
Alignment:
Q  61 tatggaaataagctgaaaacaatttatgaacaatatcataagctgttttcat-agttctcccaaacaatctcacaaaatttatgccggtagataaactca 159  Q
    |||| ||||||||||||||||| ||||||||||| ||||||| ||||||||| |||||||||||||| |||| ||||| || ||   |||||||| ||||    
T  32841022 tatgaaaataagctgaaaacaacttatgaacaatgtcataagttgttttcataagttctcccaaacagtctcgcaaaacttgtgtgagtagataagctca 32840923  T
Q  160 aataagtcaatt 171  Q
    | ||||||||||    
T  32840922 agtaagtcaatt 32840911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 60 - 170
Target Start/End: Original strand, 6950355 - 6950466
Alignment:
Q  60 ttatggaaataagctgaaaacaatttatgaacaatatcataagctgttttcata-gttctcccaaacaatctcacaaaa-tttatgccggtagataaact 157  Q
    ||||||||||||||||||||||| ||||  ||| | ||||| | ||||| |||| | |||||||||||||||||||||  |||||||| |||||||||||    
T  6950355 ttatggaaataagctgaaaacaacttatcgaca-tgtcataggttgtttacataagctctcccaaacaatctcacaaatgtttatgccagtagataaact 6950453  T
Q  158 caaataagtcaat 170  Q
    |||||||||||||    
T  6950454 caaataagtcaat 6950466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 60 - 170
Target Start/End: Original strand, 33808336 - 33808446
Alignment:
Q  60 ttatggaaataagctgaaaacaatttatgaacaatatcataagctgttttcat-agttctcccaaacaatctcacaaaatttatgccggtagataaactc 158  Q
    ||||| ||||||||| ||||||| ||||||||||||||||||||| ||||||| ||||||||||||||||| || |||| ||| |||  || |||| |||    
T  33808336 ttatgaaaataagctaaaaacaacttatgaacaatatcataagctattttcataagttctcccaaacaatcacaaaaaactta-gccactacataagctc 33808434  T
Q  159 aaataagtcaat 170  Q
     |||||||||||    
T  33808435 gaataagtcaat 33808446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 60 - 108
Target Start/End: Complemental strand, 3536982 - 3536934
Alignment:
Q  60 ttatggaaataagctgaaaacaatttatgaacaatatcataagctgttt 108  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||    
T  3536982 ttatggaaataagctgaaaacaatttatgaacaatgtcataagctgttt 3536934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 95 - 166
Target Start/End: Complemental strand, 42893492 - 42893420
Alignment:
Q  95 atcataagctgttttcata-gttctcccaaacaatctcacaaaatttatgccggtagataaactcaaataagt 166  Q
    ||||||||||||||| ||| ||||||||||||| |  ||||||| ||||||||||||||||||||||||||||    
T  42893492 atcataagctgtttttataagttctcccaaacactagcacaaaaattatgccggtagataaactcaaataagt 42893420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 30 - 154
Target Start/End: Original strand, 1930035 - 1930163
Alignment:
Q  30 tataagctgttttcacaagctatctgg---aatttatggaaataagctgaaaacaatttatgaacaatatcataagctgttttca-tagttctcccaaac 125  Q
    ||||||||||||||| ||||||||| |   |  || || ||||||||||||||||  ||||||||||| |||||| |||||||||  ||||||||||||     
T  1930035 tataagctgttttcataagctatcttggtgaccttgtgaaaataagctgaaaacagcttatgaacaatgtcataaactgttttcacaagttctcccaaat 1930134  T
Q  126 aatctcacaaaatttatgccggtagataa 154  Q
    ||| |||||||| ||||| | ||||||||    
T  1930135 aatgtcacaaaacttatgtcagtagataa 1930163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 96 - 164
Target Start/End: Original strand, 26771334 - 26771403
Alignment:
Q  96 tcataagctgttttcata-gttctcccaaacaatctcacaaaatttatgccggtagataaactcaaataa 164  Q
    |||||||||||||||||| ||||||||||||| |||||||||| ||||||| |||||||| |||| ||||    
T  26771334 tcataagctgttttcataagttctcccaaacagtctcacaaaacttatgcccgtagataagctcagataa 26771403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 30 - 170
Target Start/End: Complemental strand, 30251524 - 30251380
Alignment:
Q  30 tataagctgttttcacaagctatct-gga--atttatggaaataagctgaaaacaatttatgaacaatatcataagctgttttcata-gttctcccaaac 125  Q
    ||||||||||||||| ||||||||| |||  | ||||| |||||||||| ||| |  ||||||| |||   ||||||||||||| || ||||||||||||    
T  30251524 tataagctgttttcataagctatcttggaccacttatgaaaataagctgtaaaaagcttatgaaaaatgcaataagctgttttcgtaagttctcccaaac 30251425  T
Q  126 aatctcacaaaatttatgccggtagataaactcaaataagtcaat 170  Q
    | |||||| ||| ||||| | |||||||| |||||||||| ||||    
T  30251424 agtctcacgaaacttatgtcagtagataagctcaaataagccaat 30251380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 60 - 137
Target Start/End: Complemental strand, 29168094 - 29168016
Alignment:
Q  60 ttatggaaataagctgaaaacaatttatgaacaatatcataagctgttttcat-agttctcccaaacaatctcacaaaa 137  Q
    ||||||||||||||||| ||  ||||||||| ||| |||||| ||||||| || |||||||||||||| ||||||||||    
T  29168094 ttatggaaataagctgagaaacatttatgaaaaatgtcataatctgtttttataagttctcccaaacagtctcacaaaa 29168016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 60 - 165
Target Start/End: Complemental strand, 31716264 - 31716158
Alignment:
Q  60 ttatggaaataagctgaaaacaatttatgaacaatatcataagctgttttc-atagttctcccaaacaatctcacaaaatttatgccggtagataaactc 158  Q
    |||| ||||||||||||||| |  ||||||| ||| ||||||||||||||| | |||||||| ||||| ||||| ||||  ||||||  ||||||| |||    
T  31716264 ttatagaaataagctgaaaaaagcttatgaagaatgtcataagctgttttcaaaagttctccgaaacagtctcaaaaaaaatatgccaatagataagctc 31716165  T
Q  159 aaataag 165  Q
    |||||||    
T  31716164 aaataag 31716158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 60 - 126
Target Start/End: Complemental strand, 42215343 - 42215277
Alignment:
Q  60 ttatggaaataagctgaaaacaatttatgaacaatatcataagctgttttca-tagttctcccaaaca 126  Q
    ||||| ||||||||||||||||  ||||||||||  |||||||||||||||| |||||||||||||||    
T  42215343 ttatgtaaataagctgaaaacagcttatgaacaa-gtcataagctgttttcattagttctcccaaaca 42215277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 60 - 165
Target Start/End: Complemental strand, 1058113 - 1058008
Alignment:
Q  60 ttatggaaataagctgaaaacaatttatgaacaatatcataagctgttttcata-gttctcccaaacaatctcacaaaatttatgccggtagataaactc 158  Q
    ||||| |||||||| ||||| || | ||||| ||| |||||||| ||||||| | ||||||||||||| |||||||||| |||||   |||||||| |||    
T  1058113 ttatgaaaataagcggaaaa-aactaatgaaaaatgtcataagcagttttcaaaagttctcccaaacagtctcacaaaacttatgtaagtagataagctc 1058015  T
Q  159 aaataag 165  Q
    |||||||    
T  1058014 aaataag 1058008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 120 - 177
Target Start/End: Complemental strand, 1892201 - 1892143
Alignment:
Q  120 ccaaacaatctcacaaaa-tttatgccggtagataaactcaaataagtcaatttaaaca 177  Q
    ||||||||||||||||   |||||| |||||||||||||||||||||||||| ||||||    
T  1892201 ccaaacaatctcacaagtgtttatgacggtagataaactcaaataagtcaatctaaaca 1892143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 66 - 170
Target Start/End: Complemental strand, 14280453 - 14280347
Alignment:
Q  66 aaataagctgaaaacaatttatgaacaatatcataagctgttttcatag-ttctcccaaacaatctcacaaaat-ttatgccggtagataaactcaaata 163  Q
    ||||||||| |||||   ||| ||||||| ||||||  ||||||||||  ||| ||||||||||| |||||||  ||||||| ||||||||| |||||||    
T  14280453 aaataagctaaaaacggcttacgaacaatgtcataaattgttttcataaattcacccaaacaatcacacaaaaacttatgccagtagataaaatcaaata 14280354  T
Q  164 agtcaat 170  Q
    |||||||    
T  14280353 agtcaat 14280347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 96 - 177
Target Start/End: Complemental strand, 35534614 - 35534532
Alignment:
Q  96 tcataagctgttttcata-gttctcccaaacaatctcacaaaatttatgccggtagataaactcaaataagtcaatttaaaca 177  Q
    |||||||||||||||| | |||||| |||||| |||||||||| |||||   |||||||| ||||||||||||| | ||||||    
T  35534614 tcataagctgttttcacaagttctctcaaacagtctcacaaaacttatgttagtagataagctcaaataagtcattctaaaca 35534532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 60 - 125
Target Start/End: Complemental strand, 41606940 - 41606875
Alignment:
Q  60 ttatggaaataagctgaaaacaatttatgaacaatatcataagctgttttcatag-ttctcccaaac 125  Q
    ||||||||||||||||||||||| || ||||| || ||||||||||||||| ||| |||||||||||    
T  41606940 ttatggaaataagctgaaaacaacttttgaac-atgtcataagctgttttcgtagtttctcccaaac 41606875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 113 - 170
Target Start/End: Complemental strand, 36963337 - 36963280
Alignment:
Q  113 agttctcccaaacaatctcacaaaatttatgccggtagataaactcaaataagtcaat 170  Q
    |||||||||||||| |||||||||| ||||||| |||||| | |||||||||| ||||    
T  36963337 agttctcccaaacagtctcacaaaacttatgccagtagattagctcaaataagccaat 36963280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 113 - 170
Target Start/End: Original strand, 38602414 - 38602471
Alignment:
Q  113 agttctcccaaacaatctcacaaaatttatgccggtagataaactcaaataagtcaat 170  Q
    ||||||||||||||  ||||||||| ||||| | |||||||| |||||||||||||||    
T  38602414 agttctcccaaacagcctcacaaaacttatgtcagtagataagctcaaataagtcaat 38602471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 114 - 170
Target Start/End: Original strand, 1096578 - 1096634
Alignment:
Q  114 gttctcccaaacaatctcacaaaatttatgccggtagataaactcaaataagtcaat 170  Q
    ||||||||||| |||||||||||| ||||| |  || ||||||||||||||||||||    
T  1096578 gttctcccaaaaaatctcacaaaacttatgtcactaaataaactcaaataagtcaat 1096634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 55 - 166
Target Start/End: Original strand, 27492965 - 27493077
Alignment:
Q  55 ggaatttatggaaataagctgaaaacaatttatgaacaatatcataagctgttttcat-agttctcccaaacaatctcacaaaatttatgccggtagata 153  Q
    |||||||||| ||||||| |||||| |  ||||||||||| ||| ||  ||||||||| || ||||||||| ||| | |||||| |||| || | |||||    
T  27492965 ggaatttatgaaaataagttgaaaatagcttatgaacaatgtcacaacttgttttcataagctctcccaaataatatgacaaaacttataccagcagata 27493064  T
Q  154 aactcaaataagt 166  Q
    | |||||||||||    
T  27493065 agctcaaataagt 27493077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 59 - 165
Target Start/End: Complemental strand, 30191179 - 30191072
Alignment:
Q  59 tttatggaaataagctgaaaacaatttatgaacaatatcataagctgttttcat-agttctcccaaacaatctcacaa-aatttatgccggtagataaac 156  Q
    |||||||||||||||||||||||| || ||||| || ||||||| ||||| ||| || ||||||||||| ||| ||||    |||||||  |||||||||    
T  30191179 tttatggaaataagctgaaaacaagttttgaac-atgtcataagttgtttccataagctctcccaaacagtctaacaagtgcttatgccaatagataaac 30191081  T
Q  157 tcaaataag 165  Q
    |||||||||    
T  30191080 tcaaataag 30191072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 96 - 170
Target Start/End: Original strand, 38648420 - 38648495
Alignment:
Q  96 tcataagctgttttcata-gttctcccaaacaatctcacaaaatttatgccggtagataaactcaaataagtcaat 170  Q
    |||| ||||||||||||| | ||||||||||| |||||||||| ||||| | |||||||| || ||||||| ||||    
T  38648420 tcatgagctgttttcataaggtctcccaaacagtctcacaaaacttatgtcagtagataatcttaaataagccaat 38648495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 94 - 164
Target Start/End: Original strand, 38750424 - 38750495
Alignment:
Q  94 tatcataagctgttttcata-gttctcccaaacaatctcacaaaatttatgccggtagataaactcaaataa 164  Q
    ||||||||| |||| ||||| |||||  |||| |||||||||||| ||||||  ||||||||||||||||||    
T  38750424 tatcataaggtgttctcataagttctttcaaataatctcacaaaacttatgcaagtagataaactcaaataa 38750495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 94 - 143
Target Start/End: Original strand, 6881994 - 6882044
Alignment:
Q  94 tatcataagctgttttcatag-ttctcccaaacaatctcacaaaatttatg 143  Q
    |||||| |||||||||||||| |||||||||||| |||||||||| |||||    
T  6881994 tatcatgagctgttttcataggttctcccaaacagtctcacaaaacttatg 6882044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 139 - 177
Target Start/End: Original strand, 7008711 - 7008749
Alignment:
Q  139 ttatgccggtagataaactcaaataagtcaatttaaaca 177  Q
    ||||||| ||||||||||||||||||||||||| |||||    
T  7008711 ttatgccagtagataaactcaaataagtcaattcaaaca 7008749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 98 - 143
Target Start/End: Original strand, 28763439 - 28763485
Alignment:
Q  98 ataagctgttttcata-gttctcccaaacaatctcacaaaatttatg 143  Q
    |||||||||||||||| ||||||||||||| |||||||||| |||||    
T  28763439 ataagctgttttcataagttctcccaaacagtctcacaaaacttatg 28763485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 60 - 113
Target Start/End: Original strand, 10383918 - 10383970
Alignment:
Q  60 ttatggaaataagctgaaaacaatttatgaacaatatcataagctgttttcata 113  Q
    |||||||||||||||| |||||  ||||||| ||| ||||||||||||||||||    
T  10383918 ttatggaaataagctgtaaacagcttatgaa-aatgtcataagctgttttcata 10383970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 56 - 171
Target Start/End: Original strand, 11376732 - 11376848
Alignment:
Q  56 gaatttatggaaataagctgaaaacaatttatgaacaatatcataagctgttttcat-agttctcccaaacaatctcacaa-aatttatgccggtagata 153  Q
    |||| |||| |||||||||||||||||  ||| ||| || ||| ||||| ||||||| |||||||||||| | |||||||| || ||||  | |||||||    
T  11376732 gaatctatgaaaataagctgaaaacaagatattaac-atgtcacaagctattttcataagttctcccaaatagtctcacaagaacttatatcagtagata 11376830  T
Q  154 aactcaaataagtcaatt 171  Q
    | |||||||||| |||||    
T  11376831 agctcaaataagccaatt 11376848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 60 - 113
Target Start/End: Original strand, 13459678 - 13459730
Alignment:
Q  60 ttatggaaataagctgaaaacaatttatgaacaatatcataagctgttttcata 113  Q
    ||||| ||||| |||||||||| |||||||| ||| ||||||||||||||||||    
T  13459678 ttatgaaaataggctgaaaacagtttatgaa-aatgtcataagctgttttcata 13459730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 122 - 167
Target Start/End: Complemental strand, 30657751 - 30657706
Alignment:
Q  122 aaacaatctcacaaaatttatgccggtagataaactcaaataagtc 167  Q
    ||||| |||||||||||||||| |  ||||||||||||||||||||    
T  30657751 aaacagtctcacaaaatttatgtcattagataaactcaaataagtc 30657706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 60 - 135
Target Start/End: Original strand, 30918146 - 30918220
Alignment:
Q  60 ttatggaaataagctgaaaacaatttatgaacaatatcataagctgttttcat-agttctcccaaacaatctcacaa 135  Q
    ||||||||||||||||||||||| ||||||  ||| ||| ||| ||||||||| || |||| |||||| ||||||||    
T  30918146 ttatggaaataagctgaaaacaacttatga--aatgtcacaagttgttttcataagctctctcaaacagtctcacaa 30918220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 84 - 160
Target Start/End: Complemental strand, 42043368 - 42043291
Alignment:
Q  84 ttatgaacaatatcataagctgttttcata-gttctcccaaacaatctcacaaaatttatgccggtagataaactcaa 160  Q
    ||||||| ||||||||||||||||| |||| |||||||| |||| ||||| |||| ||||| | ||| |||| |||||    
T  42043368 ttatgaaaaatatcataagctgtttccatatgttctcccgaacagtctcataaaacttatgacagtaaataagctcaa 42043291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 96 - 170
Target Start/End: Original strand, 16162828 - 16162904
Alignment:
Q  96 tcataagctgttttcata-gttctcccaaacaatctcacaaaa-tttatgccggtagataaactcaaataagtcaat 170  Q
    |||||||||||||||||| ||| || |||||| ||||||||   |||||||  ||||||||||||||||||| ||||    
T  16162828 tcataagctgttttcataagttttctcaaacagtctcacaagtgtttatgctagtagataaactcaaataagccaat 16162904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 126 - 170
Target Start/End: Complemental strand, 16915877 - 16915833
Alignment:
Q  126 aatctcacaaaatttatgccggtagataaactcaaataagtcaat 170  Q
    ||||||||||||||||||   |||||||||||||||||| |||||    
T  16915877 aatctcacaaaatttatgtaagtagataaactcaaataaatcaat 16915833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 60 - 108
Target Start/End: Complemental strand, 31751594 - 31751546
Alignment:
Q  60 ttatggaaataagctgaaaacaatttatgaacaatatcataagctgttt 108  Q
    ||||| |||||||||||||| |  ||||||||||| |||||||||||||    
T  31751594 ttatgaaaataagctgaaaatagcttatgaacaatgtcataagctgttt 31751546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 103 - 170
Target Start/End: Complemental strand, 43717928 - 43717860
Alignment:
Q  103 ctgttttcata-gttctcccaaacaatctcacaaaatttatgccggtagataaactcaaataagtcaat 170  Q
    ||||||||||| ||||||||||| | |||||||||| ||||| |  ||||||| |||||||||| ||||    
T  43717928 ctgttttcataagttctcccaaatagtctcacaaaacttatgtcaatagataagctcaaataagccaat 43717860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 60 - 92
Target Start/End: Original strand, 44401594 - 44401626
Alignment:
Q  60 ttatggaaataagctgaaaacaatttatgaaca 92  Q
    |||||||||||||||||||||||| ||||||||    
T  44401594 ttatggaaataagctgaaaacaatgtatgaaca 44401626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 52; Significance: 6e-21; HSPs: 45)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 60 - 170
Target Start/End: Complemental strand, 52315234 - 52315123
Alignment:
Q  60 ttatggaaataagctgaaaacaatttatgaacaatatcataagctgttttcata-gttctcccaaacaatctcacaaaatttatgccggtagataaactc 158  Q
    ||||| ||||||||||||| ||| ||||||| ||| | ||||| |||||| ||| ||||| |||||||||||||||||| ||| | | ||||||||||||    
T  52315234 ttatgaaaataagctgaaagcaacttatgaataatgtgataagttgttttgataagttcttccaaacaatctcacaaaacttacgtcagtagataaactc 52315135  T
Q  159 aaataagtcaat 170  Q
    ||||||||||||    
T  52315134 aaataagtcaat 52315123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 56 - 164
Target Start/End: Complemental strand, 21731697 - 21731588
Alignment:
Q  56 gaatttatggaaataagctgaaaacaatttatgaacaatatcataagctgttttcata-gttctcccaaacaatctcacaaaatttatgccggtagataa 154  Q
    ||||||||| || |||| |||||| | |||||||| | | | |||||||||||||||| |||||||||||||||||||||||| ||||| | |||||||     
T  21731697 gaatttatgaaagtaagttgaaaaaagtttatgaaaattgtgataagctgttttcataagttctcccaaacaatctcacaaaacttatgtcagtagatat 21731598  T
Q  155 actcaaataa 164  Q
     |||||||||    
T  21731597 gctcaaataa 21731588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 66 - 169
Target Start/End: Complemental strand, 25904254 - 25904150
Alignment:
Q  66 aaataagctgaaaacaatttatgaacaatatcataagctgttttcata-gttctcccaaacaatctcacaaaatttatgccggtagataaactcaaataa 164  Q
    |||||||||||||| |  ||||||| |||  ||||||||||||||||| | ||||||||||| |||||||||||||||| |  | ||||| |||||||||    
T  25904254 aaataagctgaaaaaagcttatgaaaaatggcataagctgttttcataagctctcccaaacagtctcacaaaatttatgtcattggataagctcaaataa 25904155  T
Q  165 gtcaa 169  Q
    |||||    
T  25904154 gtcaa 25904150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 29 - 166
Target Start/End: Complemental strand, 17822936 - 17822795
Alignment:
Q  29 ctataagctgttttcacaagctatctgg---aatttatggaaataagctgaaaacaatttatgaacaatatcataagctgttttcata-gttctcccaaa 124  Q
    ||||||| |||||||| ||||||||| |   || ||||| ||||||||| |||| |  ||||||| ||| |||||||||||||||||| ||||||| |||    
T  17822936 ctataagttgttttcataagctatcttggagaacttatgaaaataagctaaaaaaagcttatgaaaaatgtcataagctgttttcatatgttctcctaaa 17822837  T
Q  125 caatctcacaaaatttatgccggtagataaactcaaataagt 166  Q
     | ||||||| || ||||| | |||||||| |||||||||||    
T  17822836 tagtctcacagaacttatgtcagtagataagctcaaataagt 17822795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 67 - 177
Target Start/End: Complemental strand, 49939981 - 49939870
Alignment:
Q  67 aataagctgaaaacaatttatgaacaatatcataagctgttttcat-agttctcccaaacaatctcacaaaatttatgccggtagataaactcaaataag 165  Q
    |||||||||||||||  ||||||||||| ||||||||| ||||||| |||||| ||||| | |||||||||  ||||||  |||||||| || |||||||    
T  49939981 aataagctgaaaacagcttatgaacaatgtcataagctcttttcataagttcttccaaatagtctcacaaagcttatgctagtagataagcttaaataag 49939882  T
Q  166 tcaatttaaaca 177  Q
     ||||| |||||    
T  49939881 ccaattgaaaca 49939870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 59 - 170
Target Start/End: Complemental strand, 1374614 - 1374502
Alignment:
Q  59 tttatggaaataagctgaaaacaatttatgaacaatatcataagctgttttcatag-ttctcccaaacaatctcacaaaatttatgccggtagataaact 157  Q
    |||||| ||||||| |||||| |||||||||| | | ||||||| ||||||||||  ||||||||||||   |||||||||||||||  |||||||| ||    
T  1374614 tttatgaaaataagttgaaaataatttatgaatattgtcataagttgttttcatatattctcccaaacagaatcacaaaatttatgctagtagataagct 1374515  T
Q  158 caaataagtcaat 170  Q
    ||| |||| ||||    
T  1374514 caattaagccaat 1374502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 96 - 170
Target Start/End: Complemental strand, 7368056 - 7367980
Alignment:
Q  96 tcataagctgttttcat-agttctcccaaacaatctcacaaaa-tttatgccggtagataaactcaaataagtcaat 170  Q
    ||||||||||||||||| || ||||||||||| ||||||||   |||||||| ||||||||||||||||||||||||    
T  7368056 tcataagctgttttcatgagctctcccaaacagtctcacaagcgtttatgcctgtagataaactcaaataagtcaat 7367980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 56 - 170
Target Start/End: Original strand, 41336789 - 41336904
Alignment:
Q  56 gaatttatggaaataagctgaaaacaatttatgaacaatatcataagctgttttcata-gttctcccaaacaatctcacaaaatttatgccggtagataa 154  Q
    ||||||| | ||||||| |||||| |  ||||||| | | ||||||||||||||| || ||||| || ||| ||||||||||| |||||   ||||||||    
T  41336789 gaatttacgaaaataagttgaaaaaagcttatgaaaactgtcataagctgttttcttaagttcttcctaactatctcacaaaacttatgtgagtagataa 41336888  T
Q  155 actcaaataagtcaat 170  Q
    ||||||||||||||||    
T  41336889 actcaaataagtcaat 41336904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 96 - 170
Target Start/End: Original strand, 54426112 - 54426187
Alignment:
Q  96 tcataagctgttttcata-gttctcccaaacaatctcacaaaatttatgccggtagataaactcaaataagtcaat 170  Q
    ||||||||||||||| || |||||||||| || |||||||||| ||||||| |||||||| |||||||||| ||||    
T  54426112 tcataagctgttttcctaagttctcccaagcagtctcacaaaacttatgccagtagataagctcaaataagccaat 54426187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 96 - 169
Target Start/End: Original strand, 29657453 - 29657527
Alignment:
Q  96 tcataagctgttttcata-gttctcccaaacaatctcacaaaatttatgccggtagataaactcaaataagtcaa 169  Q
    |||||||||||||||||| |||||| ||| ||||||||||||| || ||  ||||||||| ||||||||||||||    
T  29657453 tcataagctgttttcataagttctctcaagcaatctcacaaaacttgtgttggtagataagctcaaataagtcaa 29657527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 85 - 170
Target Start/End: Original strand, 55437134 - 55437220
Alignment:
Q  85 tatgaacaatatcataagctgttttcata-gttctcccaaacaatctcacaaaatttatgccggtagataaactcaaataagtcaat 170  Q
    |||||||||  ||||||| |||||||||| |||||  |||||||| |||||||| ||||| | ||||||||||||||||||| ||||    
T  55437134 tatgaacaacgtcataagttgttttcataagttctttcaaacaatttcacaaaacttatggcagtagataaactcaaataagccaat 55437220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 60 - 170
Target Start/End: Original strand, 24169296 - 24169407
Alignment:
Q  60 ttatggaaataagctgaaaacaatttatgaacaatatcataagctgttttcata-gttctcccaaacaatctcacaaaatttatgccggtagataaactc 158  Q
    ||||| ||||||| |||||| |  ||||||| ||| ||||||||| |||| | | |||||| |||| | |||||||||| ||||||| ||||||||||||    
T  24169296 ttatgaaaataagttgaaaaaatcttatgaaaaatgtcataagctatttttaaaagttctctcaaatagtctcacaaaacttatgccagtagataaactc 24169395  T
Q  159 aaataagtcaat 170  Q
     |||||| ||||    
T  24169396 taataagccaat 24169407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 68 - 170
Target Start/End: Complemental strand, 27043859 - 27043756
Alignment:
Q  68 ataagctgaaaacaatttatgaacaatatcataagctgttttcatag-ttctcccaaacaatctcacaaaatttatgccggtagataaactcaaataagt 166  Q
    ||||||| ||||||||||||| || ||  |||||||| ||| ||||  |||| ||||||| | |||||||| ||||| | |||||||| |||||||||||    
T  27043859 ataagctaaaaacaatttatggacgatgccataagctatttgcataacttcttccaaacagtttcacaaaacttatgtcagtagataagctcaaataagt 27043760  T
Q  167 caat 170  Q
    ||||    
T  27043759 caat 27043756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 29 - 170
Target Start/End: Complemental strand, 35571702 - 35571557
Alignment:
Q  29 ctataagctgttttcacaagctatctg---gaatttatggaaataagctgaaaacaatttatgaacaatatcataagctgttttcata-gttctcccaaa 124  Q
    |||||||||||||||| |||||||||    ||| || || ||||||| ||||| ||  | ||||||| | | |||||||||||| | | |||||||||||    
T  35571702 ctataagctgttttcataagctatcttagagaacttgtgaaaataagttgaaaccagctcatgaacagtgtaataagctgtttttaaaagttctcccaaa 35571603  T
Q  125 caatctcacaaaatttatgccggtagataaactcaaataagtcaat 170  Q
    | ||| ||||||| ||||||  |||||||| |||||||||| ||||    
T  35571602 ctatcccacaaaacttatgctagtagataagctcaaataagccaat 35571557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 96 - 170
Target Start/End: Complemental strand, 39011129 - 39011054
Alignment:
Q  96 tcataagctgttttcata-gttctcccaaacaatctcacaaaatttatgccggtagataaactcaaataagtcaat 170  Q
    |||||||||||||||||| ||||||||||||  |||||| | | ||||||| | |||||| |||||||||||||||    
T  39011129 tcataagctgttttcatatgttctcccaaactgtctcacgatacttatgcccgaagataagctcaaataagtcaat 39011054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 84 - 161
Target Start/End: Original strand, 1706679 - 1706757
Alignment:
Q  84 ttatgaacaatatcataagctgttttcatagtt-ctcccaaacaatctcacaaaatttatgccggtagataaactcaaa 161  Q
    |||||||||||  ||||||||||||||||| || ||| |||||  |||||||||| ||||| | |||||||||||||||    
T  1706679 ttatgaacaatgccataagctgttttcataatttctctcaaaccgtctcacaaaacttatgtcagtagataaactcaaa 1706757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 115 - 177
Target Start/End: Complemental strand, 39691130 - 39691068
Alignment:
Q  115 ttctcccaaacaatctcacaaaatttatgccggtagataaactcaaataagtcaatttaaaca 177  Q
    ||||| |||||| |||||||||| ||||||  |||||||| |||||||||||||||| |||||    
T  39691130 ttctctcaaacagtctcacaaaacttatgctagtagataagctcaaataagtcaattcaaaca 39691068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 74 - 170
Target Start/End: Complemental strand, 15173326 - 15173229
Alignment:
Q  74 tgaaaacaatttatgaacaatatcataagctgttttcatagt-tctcccaaacaatctcacaaaatttatgccggtagataaactcaaataagtcaat 170  Q
    |||||| || ||||||| | | ||||||||| ||||||||   ||||||||||| |||||||||| ||||| | ||||||||  ||||||||||||||    
T  15173326 tgaaaaaaacttatgaaaattgtcataagctattttcataaagtctcccaaacagtctcacaaaacttatgtcagtagataagttcaaataagtcaat 15173229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 60 - 113
Target Start/End: Original strand, 24929526 - 24929578
Alignment:
Q  60 ttatggaaataagctgaaaacaatttatgaacaatatcataagctgttttcata 113  Q
    |||||||||||||||||||||||||||||||| ||  |||||||||||| ||||    
T  24929526 ttatggaaataagctgaaaacaatttatgaac-atgccataagctgtttccata 24929578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 66 - 170
Target Start/End: Original strand, 25571299 - 25571403
Alignment:
Q  66 aaataagctgaaaacaatttatgaacaatatcataagctgttttcata-gttctcccaaacaatctcacaaaatttatgccggtagataaactcaaataa 164  Q
    ||||||||||||||||  ||||||||| |||||||| |||||| |||| ||||||| ||||| | |||   || ||||| | ||||||||||||||||||    
T  25571299 aaataagctgaaaacagcttatgaaca-tatcataaactgtttccataagttctcctaaacagtttcatgtaacttatgtcagtagataaactcaaataa 25571397  T
Q  165 gtcaat 170  Q
    | ||||    
T  25571398 gccaat 25571403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 63 - 108
Target Start/End: Original strand, 29263406 - 29263450
Alignment:
Q  63 tggaaataagctgaaaacaatttatgaacaatatcataagctgttt 108  Q
    |||||||||||||||||||| |||||||| ||||||||||||||||    
T  29263406 tggaaataagctgaaaacaacttatgaac-atatcataagctgttt 29263450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 29 - 93
Target Start/End: Original strand, 679254 - 679318
Alignment:
Q  29 ctataagctgttttcacaagctatctggaatttatggaaataagctgaaaacaatttatgaacaa 93  Q
    |||||||||||||||| ||| ||||| ||| ||||| ||||||||| |||||| |||| ||||||    
T  679254 ctataagctgttttcataagttatcttgaacttatgaaaataagctcaaaacagtttaggaacaa 679318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 60 - 135
Target Start/End: Original strand, 1137745 - 1137820
Alignment:
Q  60 ttatggaaataagctgaaaacaatttatgaacaatatcataagctgttttcat-agttctcccaaacaatctcacaa 135  Q
    |||||||||||| |||||||||| |||||||| || ||||||| ||||||||| |||||||| ||||| | ||||||    
T  1137745 ttatggaaataaactgaaaacaacttatgaac-atgtcataagatgttttcataagttctcctaaacagtgtcacaa 1137820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 60 - 170
Target Start/End: Complemental strand, 6987778 - 6987667
Alignment:
Q  60 ttatggaaataagctgaaaacaatttatgaacaatatcataagctgttttcata-gttctcccaaacaatctcacaaa-atttatgccggtagataaact 157  Q
    ||||||||||||| |||||| | |||||| ||| | ||||||| ||| | |||| | ||||||||||| ||||||||| | ||||||  |||||||||||    
T  6987778 ttatggaaataagttgaaaatagtttatggaca-tgtcataagttgtatccataagctctcccaaacagtctcacaaacacttatgctagtagataaact 6987680  T
Q  158 caaataagtcaat 170  Q
    ||| |||||||||    
T  6987679 caattaagtcaat 6987667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 60 - 143
Target Start/End: Complemental strand, 13126613 - 13126529
Alignment:
Q  60 ttatggaaataagctgaaaacaatttatgaacaatatcataagctgttttcat-agttctcccaaacaatctcacaaaatttatg 143  Q
    ||||| |||||||||||||| |  ||||||  ||| |||||||||||||| || |||||| ||||||| |||||||||| |||||    
T  13126613 ttatgaaaataagctgaaaaaagcttatgataaatgtcataagctgtttttataagttcttccaaacagtctcacaaaacttatg 13126529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 76 - 170
Target Start/End: Original strand, 28615384 - 28615478
Alignment:
Q  76 aaaacaatttatgaacaatatcataagctgttttcata-gttctcccaaacaatctcacaaaa-tttatgccggtagataaactcaaataagtcaat 170  Q
    ||||||| ||||||| ||| |||| ||||||||||||| ||||||| ||||||||||||||   |||||||  ||||||||||| ||||||||||||    
T  28615384 aaaacaacttatgaa-aatgtcattagctgttttcataagttctcc-aaacaatctcacaagtgtttatgctagtagataaacttaaataagtcaat 28615478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 103 - 170
Target Start/End: Original strand, 40174633 - 40174701
Alignment:
Q  103 ctgttttcata-gttctcccaaacaatctcacaaaatttatgccggtagataaactcaaataagtcaat 170  Q
    ||||||||||| ||| ||||||||| |||||||||| |||||   |||||||||||||||||| |||||    
T  40174633 ctgttttcataagttatcccaaacagtctcacaaaacttatgttagtagataaactcaaataaatcaat 40174701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 29 - 92
Target Start/End: Complemental strand, 7694081 - 7694015
Alignment:
Q  29 ctataagctgttttcacaagctatc-tggaa--tttatggaaataagctgaaaacaatttatgaaca 92  Q
    |||||||||||||||| ||| |||| ||||   |||||||||||||||||||||||| |||||||||    
T  7694081 ctataagctgttttcataagttatcctggagagtttatggaaataagctgaaaacaacttatgaaca 7694015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 96 - 170
Target Start/End: Complemental strand, 21043237 - 21043162
Alignment:
Q  96 tcataagctgttttcatagt-tctcccaaacaatctcacaaaatttatgccggtagataaactcaaataagtcaat 170  Q
    ||||||||||||| ||||   ||||||||||| ||||||||  || ||||| |||| |||||||||||||||||||    
T  21043237 tcataagctgtttccataacctctcccaaacagtctcacaagtttcatgcctgtaggtaaactcaaataagtcaat 21043162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 96 - 170
Target Start/End: Original strand, 22030272 - 22030347
Alignment:
Q  96 tcataagctgttttcata-gttctcccaaacaatctcacaaaatttatgccggtagataaactcaaataagtcaat 170  Q
    |||||||||||||||||| ||||||||||| |  ||||||||| ||||||   |||| || |||||||||||||||    
T  22030272 tcataagctgttttcataagttctcccaaataggctcacaaaacttatgctaatagacaagctcaaataagtcaat 22030347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 60 - 142
Target Start/End: Original strand, 25332808 - 25332891
Alignment:
Q  60 ttatggaaataagctgaaaacaatttatgaacaatatcataagctgttttc-atagttctcccaaacaatctcacaaaatttat 142  Q
    ||||| ||||||||||||||||| ||||||| |||  |||||| |||||||   |||||||||||| | |||||||||| ||||    
T  25332808 ttatgaaaataagctgaaaacaacttatgaataatgccataagttgttttcgcaagttctcccaaatagtctcacaaaacttat 25332891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 66 - 144
Target Start/End: Original strand, 49202684 - 49202763
Alignment:
Q  66 aaataagctgaaaacaatttatgaacaatatcataagctgttttcat-agttctcccaaacaatctcacaaaatttatgc 144  Q
    ||||||| ||||||||| ||||||||||| | |||| ||| ||| || |||||| ||||||| |||||||||| ||||||    
T  49202684 aaataagttgaaaacaacttatgaacaatgtgataatctggttttataagttcttccaaacagtctcacaaaacttatgc 49202763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 62 - 170
Target Start/End: Original strand, 19304961 - 19305070
Alignment:
Q  62 atggaaataagctgaaaacaatttatgaacaatatcataagctgttttcatag-ttctcccaaacaatctcacaaaat-ttatgccggtagataaactca 159  Q
    ||||||| ||||||||||||| ||||| ||| | ||||||||||||| || |  |||||||| |||||||||||||   ||||| |  ||||||| ||||    
T  19304961 atggaaacaagctgaaaacaacttatggaca-tgtcataagctgtttccacaaattctcccacacaatctcacaaatgcttatgtcaatagataatctca 19305059  T
Q  160 aataagtcaat 170  Q
    |||||||||||    
T  19305060 aataagtcaat 19305070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 60 - 113
Target Start/End: Complemental strand, 20936266 - 20936214
Alignment:
Q  60 ttatggaaataagctgaaaacaatttatgaacaatatcataagctgttttcata 113  Q
    ||||||||||||| ||||||||  |||||||| |||||||||| ||||||||||    
T  20936266 ttatggaaataaggtgaaaacagcttatgaac-atatcataagttgttttcata 20936214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 59 - 92
Target Start/End: Original strand, 35064887 - 35064920
Alignment:
Q  59 tttatggaaataagctgaaaacaatttatgaaca 92  Q
    ||||||||||||||||||||||||||||| ||||    
T  35064887 tttatggaaataagctgaaaacaatttataaaca 35064920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 59 - 170
Target Start/End: Complemental strand, 37575974 - 37575862
Alignment:
Q  59 tttatggaaataagctgaaaacaatttatgaacaatatcataagctgttttcata-gttctcccaaacaatctcacaaaa-tttatgccggtagataaac 156  Q
    ||||||||||| |||||||||||| ||||||  | | | ||||| | |||||||| |||||| |||||||| |||| | | |||||||  | ||||||||    
T  37575974 tttatggaaatgagctgaaaacaacttatgagta-tgttataagttattttcataagttctctcaaacaatgtcacgagagtttatgctagcagataaac 37575876  T
Q  157 tcaaataagtcaat 170  Q
    ||||||||||||||    
T  37575875 tcaaataagtcaat 37575862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 145 - 178
Target Start/End: Original strand, 40613290 - 40613323
Alignment:
Q  145 cggtagataaactcaaataagtcaatttaaacaa 178  Q
    ||||||||||||||||||||||||||| ||||||    
T  40613290 cggtagataaactcaaataagtcaattgaaacaa 40613323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 63 - 135
Target Start/End: Complemental strand, 50800064 - 50799992
Alignment:
Q  63 tggaaataagctgaaaacaatttatgaacaatatcataagctgttttcat-agttctcccaaacaatctcacaa 135  Q
    |||||||||||||||||||  ||||  ||| | ||||||| ||||| ||| |||||||||||||||||||||||    
T  50800064 tggaaataagctgaaaacagcttatagaca-tgtcataagttgtttacattagttctcccaaacaatctcacaa 50799992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 70 - 157
Target Start/End: Original strand, 20719746 - 20719834
Alignment:
Q  70 aagctgaaaacaatttatgaacaatatcataagctgttttcat-agttctcccaaacaatctcacaaaatttatgccggtagataaact 157  Q
    ||||||||||||  |||  |||||| ||||||||||||||| | |||||| ||||| | || ||||||| ||||||  |||||||||||    
T  20719746 aagctgaaaacagcttacaaacaatgtcataagctgttttcttaagttcttccaaatagtcgcacaaaacttatgctagtagataaact 20719834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 60 - 143
Target Start/End: Original strand, 21523591 - 21523674
Alignment:
Q  60 ttatggaaataagctgaaaacaatttatgaacaatatcataagctgttttcatag-ttctcccaaacaatctcacaaaatttatg 143  Q
    ||||| |||||||||||||| |  ||||||| ||| ||||||| ||||||||||  |||| ||||||| | ||||||||||||||    
T  21523591 ttatgaaaataagctgaaaa-agcttatgaaaaatgtcataagttgttttcataaattcttccaaacagtgtcacaaaatttatg 21523674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 113 - 169
Target Start/End: Original strand, 29388701 - 29388757
Alignment:
Q  113 agttctcccaaacaatctcacaaaatttatgccggtagataaactcaaataagtcaa 169  Q
    |||||||||||||||||| |||||| |||||   ||||||||  |||||||||||||    
T  29388701 agttctcccaaacaatcttacaaaacttatgttagtagataaggtcaaataagtcaa 29388757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 96 - 167
Target Start/End: Original strand, 43506004 - 43506076
Alignment:
Q  96 tcataagctgttttcat-agttctcccaaacaatctcacaaaatttatgccggtagataaactcaaataagtc 167  Q
    ||||||||| ||||||  ||| ||||| |||| |||||||||| || || |||| ||||||||||||||||||    
T  43506004 tcataagctattttcacgagtcctccctaacagtctcacaaaacttttgtcggtggataaactcaaataagtc 43506076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 60 - 92
Target Start/End: Original strand, 43824316 - 43824348
Alignment:
Q  60 ttatggaaataagctgaaaacaatttatgaaca 92  Q
    ||||||||||||||||||||||| |||||||||    
T  43824316 ttatggaaataagctgaaaacaacttatgaaca 43824348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 115 - 163
Target Start/End: Complemental strand, 44862965 - 44862917
Alignment:
Q  115 ttctcccaaacaatctcacaaaatttatgccggtagataaactcaaata 163  Q
    ||||||||||||||||||||||| || |||| ||||| || ||||||||    
T  44862965 ttctcccaaacaatctcacaaaacttttgccagtagacaagctcaaata 44862917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 84 - 175
Target Start/End: Complemental strand, 49003888 - 49003796
Alignment:
Q  84 ttatgaacaatatcataagctgttttcatagtt-ctcccaaacaatctcacaaaatttatgccggtagataaactcaaataagtcaatttaaa 175  Q
    ||||||||||| ||||| ||| |||||||| || |||||||||  | |||||||| ||| | | || ||||| ||||||||||||||| ||||    
T  49003888 ttatgaacaatgtcatacgctcttttcatattttctcccaaaccgtttcacaaaacttacgtcagtggataagctcaaataagtcaatctaaa 49003796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 51; Significance: 3e-20; HSPs: 29)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 60 - 177
Target Start/End: Complemental strand, 19302600 - 19302482
Alignment:
Q  60 ttatggaaataagctgaaaacaatttatgaacaatatcataagctgttttcatag-ttctcccaaacaatctcacaaaatttatgccggtagataaactc 158  Q
    ||||| ||||||| |||||| | |||||||| | | ||||||||||||||||||  |||||||||| | |||||||||| ||||| | |||||||| |||    
T  19302600 ttatgaaaataagttgaaaaaagtttatgaaaattgtcataagctgttttcataaattctcccaaatattctcacaaaacttatgtcagtagataagctc 19302501  T
Q  159 aaataagtcaatttaaaca 177  Q
    ||||||||||||| |||||    
T  19302500 aaataagtcaattcaaaca 19302482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 60 - 143
Target Start/End: Complemental strand, 20526966 - 20526882
Alignment:
Q  60 ttatggaaataagctgaaaacaatttatgaacaatatcataagctgttttcat-agttctcccaaacaatctcacaaaatttatg 143  Q
    ||||| |||||||||||||| |  |||| |||||| ||||||||||||||||| ||||||| |||||| ||||||||||||||||    
T  20526966 ttatgaaaataagctgaaaagatcttataaacaatctcataagctgttttcatcagttctctcaaacagtctcacaaaatttatg 20526882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 29 - 170
Target Start/End: Original strand, 20526445 - 20526590
Alignment:
Q  29 ctataagctgttttcacaagctatctgg---aatttatggaaataagctgaaaacaatttatgaacaatatcataagctgttttcata-gttctcccaaa 124  Q
    |||||||||||||||| ||||||| | |   || | ||| ||||||||| ||||||  ||| ||| ||| | |||| ||||||||||| |||||| ||||    
T  20526445 ctataagctgttttcataagctattttggagaactaatgaaaataagctaaaaacagcttacgaaaaatgtgataaactgttttcataagttctctcaaa 20526544  T
Q  125 caatctcacaaaatttatgccggtagataaactcaaataagtcaat 170  Q
    || ||||||||||||| | ||  |||||||||||||||||||||||    
T  20526545 cagtctcacaaaatttctaccaatagataaactcaaataagtcaat 20526590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 30 - 170
Target Start/End: Original strand, 48470044 - 48470188
Alignment:
Q  30 tataagctgttttcacaagctatctggaat---ttatggaaataagctgaaaacaatttatgaacaatatcataagctgttttcata-gttctcccaaac 125  Q
    |||||| |||||||| ||||||| | ||||   ||||| | ||||||| |||| |  ||||||| |||  ||||||||||||||||| ||||||||||||    
T  48470044 tataagttgttttcataagctattttgaataacttatgaacataagctcaaaaaagcttatgaaaaatgccataagctgttttcataagttctcccaaac 48470143  T
Q  126 aatctcacaaaatttatgccggtagataaactcaaataagtcaat 170  Q
    ||||||| |||| ||||| |  ||||||| |||||||||| ||||    
T  48470144 aatctcataaaacttatgtctatagataagctcaaataagccaat 48470188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 66 - 177
Target Start/End: Original strand, 34035956 - 34036068
Alignment:
Q  66 aaataagctgaaaacaatttatgaacaatatcataagctgttttcat-agttctcccaaacaatctcacaaaatttatgccggtagataaactcaaataa 164  Q
    ||||||| ||||||||| ||||||||||| ||||||| | ||||||| |||||| ||||  | |||||||| |  |||| | |||||||| |||||||||    
T  34035956 aaataagttgaaaacaacttatgaacaatgtcataagttattttcataagttcttccaagtagtctcacaatacatatgtcagtagataagctcaaataa 34036055  T
Q  165 gtcaatttaaaca 177  Q
    ||||||| |||||    
T  34036056 gtcaattcaaaca 34036068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 60 - 154
Target Start/End: Complemental strand, 19022622 - 19022527
Alignment:
Q  60 ttatggaaataagctgaaaacaatttatgaacaatatcataagctgttttcatag-ttctcccaaacaatctcacaaaatttatgccggtagataa 154  Q
    ||||| ||||||| |||| |||| ||||||| | | ||||||| ||||||||||  ||||||||||||||||||||||| | ||| | ||||||||    
T  19022622 ttatgaaaataagttgaagacaacttatgaaaattgtcataagttgttttcataaattctcccaaacaatctcacaaaactcatgtcagtagataa 19022527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 60 - 154
Target Start/End: Complemental strand, 19214443 - 19214348
Alignment:
Q  60 ttatggaaataagctgaaaacaatttatgaacaatatcataagctgttttcata-gttctcccaaacaatctcacaaaatttatgccggtagataa 154  Q
    ||||| ||||||| |||||  | |||||||| | | ||||  |||||||||||| |||||||||||||||||||||||| ||||||  ||||||||    
T  19214443 ttatgaaaataagttgaaacaagtttatgaaaattgtcatttgctgttttcataagttctcccaaacaatctcacaaaacttatgcatgtagataa 19214348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 29 - 154
Target Start/End: Original strand, 33678779 - 33678908
Alignment:
Q  29 ctataagctgttttcacaagctatctgg---aatttatggaaataagctgaaaacaatttatgaacaatatcataagctgttttcata-gttctcccaaa 124  Q
    |||||||||||||||| ||||||||| |   || || || ||||||| ||||||||  | ||||||||| | ||||| |||||||||| |||||||||||    
T  33678779 ctataagctgttttcataagctatcttggaaaacttgtgaaaataagttgaaaacatctcatgaacaatgttataagttgttttcataagttctcccaaa 33678878  T
Q  125 caatctcacaaaatttatgccggtagataa 154  Q
       |||||||||| ||||||  ||||||||    
T  33678879 ttgtctcacaaaacttatgcaagtagataa 33678908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 95 - 178
Target Start/End: Complemental strand, 22296231 - 22296146
Alignment:
Q  95 atcataagctgttttcata--gttctcccaaacaatctcacaaaatttatgccggtagataaactcaaataagtcaatttaaacaa 178  Q
    |||||||||| |||| |||  ||||||||||||||||||||| || ||||| |    |||||||||||||||||||||| ||||||    
T  22296231 atcataagctattttgataaagttctcccaaacaatctcacagaacttatgtcaccggataaactcaaataagtcaattcaaacaa 22296146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 60 - 144
Target Start/End: Complemental strand, 21568532 - 21568447
Alignment:
Q  60 ttatggaaataagctgaaaacaatttatgaacaatatcataagctgttttcata-gttctcccaaacaatctcacaaaatttatgc 144  Q
    |||||||| |||| |||||| |  ||||||| | | | |||||||||||||||| ||||||||||||| ||||||||||| |||||    
T  21568532 ttatggaactaagttgaaaagagcttatgaaaattgttataagctgttttcataagttctcccaaacagtctcacaaaatatatgc 21568447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 113 - 170
Target Start/End: Complemental strand, 22283629 - 22283572
Alignment:
Q  113 agttctcccaaacaatctcacaaaatttatgccggtagataaactcaaataagtcaat 170  Q
    |||||||| ||||| |||||||||||||||| | ||||||||  ||||||||||||||    
T  22283629 agttctcctaaacagtctcacaaaatttatgacagtagataagttcaaataagtcaat 22283572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 96 - 168
Target Start/End: Original strand, 25596101 - 25596174
Alignment:
Q  96 tcataagctgttttcatag-ttctcccaaacaatctcacaaaatttatgccggtagataaactcaaataagtca 168  Q
    |||||||||||||| |||| || |||| |||||||||||||   |||||| ||||||||| |||||||||||||    
T  25596101 tcataagctgtttttataggttttccctaacaatctcacaatgcttatgctggtagataagctcaaataagtca 25596174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 29 - 113
Target Start/End: Original strand, 39967919 - 39968006
Alignment:
Q  29 ctataagctgttttcacaagctatctg---gaatttatggaaataagctgaaaacaatttatgaacaatatcataagctgttttcata 113  Q
    ||||||| |||||||| ||||||||||   ||| | ||| ||||||| ||||||||  |||||||||||  |||||||||||||||||    
T  39967919 ctataagttgttttcataagctatctgagagaactaatgaaaataagttgaaaacagcttatgaacaatgccataagctgttttcata 39968006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 30 - 170
Target Start/End: Original strand, 44821959 - 44822102
Alignment:
Q  30 tataagctgttttcacaagctat-ctgga--atttatggaaataagctgaaaacaatttatgaacaatatcataagctgttttcat-agttctcccaaac 125  Q
    ||||||||||||||| ||||||| |||||  | ||||| ||||||| ||||||||| ||||  ||| | |  |||| ||||||| | || ||| | ||||    
T  44821959 tataagctgttttcataagctattctggagaacttatgaaaataagttgaaaacaacttattgacattttt-taagttgttttcgtgaggtctgctaaac 44822057  T
Q  126 aatctcacaaaatttatgccggtagataaactcaaataagtcaat 170  Q
    |||||||||||| ||||| | | ||||||||||||||||||||||    
T  44822058 aatctcacaaaacttatgtcagcagataaactcaaataagtcaat 44822102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 66 - 172
Target Start/End: Complemental strand, 25670617 - 25670510
Alignment:
Q  66 aaataagctgaaaacaatttatgaacaatatcataagctgttttcat-agttctcccaaacaatctcacaa-aatttatgccggtagataaactcaaata 163  Q
    |||||||||||||||||||||| ||| || ||||||| ||||||||| |||| || |||||| |||||||| |  ||||| |  ||||||| ||||| ||    
T  25670617 aaataagctgaaaacaatttattaac-atgtcataagttgttttcataagttttctcaaacagtctcacaagagcttatgtcaatagataagctcaagta 25670519  T
Q  164 agtcaattt 172  Q
    |||||||||    
T  25670518 agtcaattt 25670510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 69 - 164
Target Start/End: Complemental strand, 33601438 - 33601342
Alignment:
Q  69 taagctgaaaacaatttatgaacaatatcataagctgttttcat-agttctcccaaacaatctcacaaaatttatgccggtagataaactcaaataa 164  Q
    ||||||||||| |  ||||||| | | ||||||||||||||||| |||||||  ||| | |||||||||| |||||||  ||||||| |||||||||    
T  33601438 taagctgaaaaaagcttatgaaaagtgtcataagctgttttcataagttctcgaaaagagtctcacaaaacttatgccaatagataagctcaaataa 33601342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 29 - 177
Target Start/End: Original strand, 30535562 - 30535714
Alignment:
Q  29 ctataagctgttttcacaagctatctg---gaatttatggaaataagctgaaaacaatttatgaacaatatcataagctgttttcata-gttctcccaaa 124  Q
    ||||||||||||| || |||||||||    |||  |||| |||||| |||||||||  ||| ||||| ||||||||| |||||||||| ||||||| |||    
T  30535562 ctataagctgtttccataagctatcttatagaacatatgaaaataacctgaaaacagcttacgaaca-tatcataagttgttttcataagttctccaaaa 30535660  T
Q  125 caatctcacaaaa-tttatgccggtagataaactcaaataagtcaatttaaaca 177  Q
    || |||| |||   |||||| | ||| || |||||||||||||||||| |||||    
T  30535661 cagtctctcaagtgtttatgtcagtaaattaactcaaataagtcaattcaaaca 30535714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 115 - 170
Target Start/End: Complemental strand, 33266467 - 33266412
Alignment:
Q  115 ttctcccaaacaatctcacaaaatttatgccggtagataaactcaaataagtcaat 170  Q
    |||||||||| | | |||||||| ||||| |||||||||| |||||||||||||||    
T  33266467 ttctcccaaatagtttcacaaaacttatgtcggtagataagctcaaataagtcaat 33266412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 97 - 170
Target Start/End: Complemental strand, 4970792 - 4970718
Alignment:
Q  97 cataagctgttttcata-gttctcccaaacaatctcacaaaatttatgccggtagataaactcaaataagtcaat 170  Q
    |||||| |||||||||| ||||||||||||| |||||||| | ||||| |   |||||| |||||||||||||||    
T  4970792 cataagttgttttcataagttctcccaaacagtctcacaagacttatgtcacgagataagctcaaataagtcaat 4970718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 60 - 164
Target Start/End: Original strand, 36517612 - 36517715
Alignment:
Q  60 ttatggaaataagctgaaaacaatttatgaacaatatcataagctgttttcata-gttctcccaaacaatctcacaaaatttatgccggtagataaactc 158  Q
    ||||| |||||| ||||||| |  ||||||||||| |||  ||||||||| ||| ||||||||||||| ||| | |||| ||||||| |||| ||| |||    
T  36517612 ttatgaaaataaactgaaaatagcttatgaacaatgtca--agctgttttaataagttctcccaaacagtcttagaaaacttatgccagtagctaagctc 36517709  T
Q  159 aaataa 164  Q
    ||||||    
T  36517710 aaataa 36517715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 98 - 165
Target Start/End: Complemental strand, 46280282 - 46280211
Alignment:
Q  98 ataagctgttttcata----gttctcccaaacaatctcacaaaatttatgccggtagataaactcaaataag 165  Q
    ||||||||||||||||    ||||||||||||| ||||||||||  |||| | | |||||||||||||||||    
T  46280282 ataagctgttttcataataagttctcccaaacagtctcacaaaacatatgtcagcagataaactcaaataag 46280211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 100 - 177
Target Start/End: Original strand, 20234535 - 20234611
Alignment:
Q  100 aagctgttttcatagttctcccaaacaatctcacaaaatttatgccggtagataaactcaaataagtcaatttaaaca 177  Q
    |||||||| ||| |||||||||||| | |||||||||| ||||||  ||| |||| |||||||||| ||||| |||||    
T  20234535 aagctgttgtca-agttctcccaaaaagtctcacaaaacttatgcaagtatataagctcaaataagccaattgaaaca 20234611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 60 - 109
Target Start/End: Original strand, 25511659 - 25511707
Alignment:
Q  60 ttatggaaataagctgaaaacaatttatgaacaatatcataagctgtttt 109  Q
    ||||||||||||| |||| ||||||||||||| || ||||||||||||||    
T  25511659 ttatggaaataagttgaagacaatttatgaac-atgtcataagctgtttt 25511707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 56 - 135
Target Start/End: Complemental strand, 28128436 - 28128362
Alignment:
Q  56 gaatttatggaaataagctgaaaacaatttatgaacaatatcataagctgttttca-tagttctcccaaacaatctcacaa 135  Q
    ||||||||||||||||||||||||||||| ||| |      |||||| ||||||||  |||||||| ||||||||||||||    
T  28128436 gaatttatggaaataagctgaaaacaattcatgca------cataagttgttttcacaagttctccaaaacaatctcacaa 28128362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 121 - 166
Target Start/End: Original strand, 31744897 - 31744942
Alignment:
Q  121 caaacaatctcacaaaatttatgccggtagataaactcaaataagt 166  Q
    |||||||||||| |||||||| | ||||||||||| ||||||||||    
T  31744897 caaacaatctcataaaatttacgtcggtagataaattcaaataagt 31744942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 59 - 135
Target Start/End: Original strand, 33894659 - 33894735
Alignment:
Q  59 tttatggaaataagctgaaaacaatttatgaacaatatcataagctgttttcat-agttctcccaaacaatctcacaa 135  Q
    ||||| |||||||||||||||||| ||||| || || ||||| ||||||||||| || |||| |||||| ||||||||    
T  33894659 tttattgaaataagctgaaaacaacttatggac-atgtcatatgctgttttcataagctctcacaaacagtctcacaa 33894735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 113 - 170
Target Start/End: Original strand, 45338540 - 45338597
Alignment:
Q  113 agttctcccaaacaatctcacaaaatttatgccggtagataaactcaaataagtcaat 170  Q
    |||||||||||||| ||||| |||| ||||||  || |||||||||||||||| ||||    
T  45338540 agttctcccaaacagtctcaaaaaacttatgctagtggataaactcaaataagccaat 45338597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 103 - 170
Target Start/End: Complemental strand, 20526284 - 20526216
Alignment:
Q  103 ctgttttcata-gttctcccaaacaatctcacaaaatttatgccggtagataaactcaaataagtcaat 170  Q
    ||||||||||| |||||| ||||||||||||||||||  |||||  | |||||||||||| ||| ||||    
T  20526284 ctgttttcataagttctctcaaacaatctcacaaaatgcatgccaatggataaactcaaacaagccaat 20526216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 60 - 166
Target Start/End: Complemental strand, 46104604 - 46104497
Alignment:
Q  60 ttatggaaataagctgaaaacaatttatgaacaatatcataagctgttttcatagt-tctcccaaacaatctcacaaaa-tttatgccggtagataaact 157  Q
    ||||| |||||||||| ||||| |||||  ||| | |||| || |||||||||| | | ||||||||||| |||||| | |||||| |||||||||| ||    
T  46104604 ttatgaaaataagctggaaacattttattgaca-tgtcatgagttgttttcataatctttcccaaacaatatcacaagagtttatgacggtagataagct 46104506  T
Q  158 caaataagt 166  Q
    |||||||||    
T  46104505 caaataagt 46104497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 47; Significance: 6e-18; HSPs: 23)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 60 - 165
Target Start/End: Complemental strand, 34910446 - 34910340
Alignment:
Q  60 ttatggaaataagctgaaaacaatttatgaacaatatcataagctgttttcatag-ttctcccaaacaatctcacaaaatttatgccggtagataaactc 158  Q
    ||||| || ||||| |||||||| | ||||||||| ||||||||||||||||||| |||| |||||||||||| ||||| | ||  | ||||||||||||    
T  34910446 ttatgaaagtaagcggaaaacaactcatgaacaatgtcataagctgttttcatagtttcttccaaacaatctcccaaaactgatatcagtagataaactc 34910347  T
Q  159 aaataag 165  Q
    |||||||    
T  34910346 aaataag 34910340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 61 - 154
Target Start/End: Original strand, 31813195 - 31813289
Alignment:
Q  61 tatggaaataagctgaaaacaatttatgaacaatatcataagctgttttcat-agttctcccaaacaatctcacaaaatttatgccggtagataa 154  Q
    |||| |||||||||||||||   ||||||||||| ||||||||  ||||||| |||||||||||| | |||||||||| ||||||| ||| ||||    
T  31813195 tatgaaaataagctgaaaacggcttatgaacaatctcataagcaattttcataagttctcccaaatagtctcacaaaacttatgccagtaaataa 31813289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 56 - 166
Target Start/End: Complemental strand, 34404766 - 34404656
Alignment:
Q  56 gaatttatggaaataagctgaaaacaatttatgaacaatatcataagctgttttcata-gttctcccaaacaatctcacaaaatttatgccggtagataa 154  Q
    ||||||||| ||||| ||||||||||  ||||| ||| | ||||||| | |||||||| ||||||||||| | || ||||||| ||||| | || |||||    
T  34404766 gaatttatgaaaatatgctgaaaacagcttatgtaca-tgtcataagatattttcataagttctcccaaagactcacacaaaacttatgtcagttgataa 34404668  T
Q  155 actcaaataagt 166  Q
    ||||||||||||    
T  34404667 actcaaataagt 34404656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 96 - 177
Target Start/End: Original strand, 31623619 - 31623701
Alignment:
Q  96 tcataagctgttttcata-gttctcccaaacaatctcacaaaatttatgccggtagataaactcaaataagtcaatttaaaca 177  Q
    ||||||||| |||||| | |||||||||||| | |||| |||| ||| ||| ||||||||| ||||||||||||||| |||||    
T  31623619 tcataagctattttcagaagttctcccaaaccacctcaaaaaacttaggccagtagataaattcaaataagtcaattcaaaca 31623701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 66 - 164
Target Start/End: Original strand, 2455030 - 2455126
Alignment:
Q  66 aaataagctgaaaacaatttatgaacaatatcataagctgttttca-tagttctcccaaacaatctcacaaaatttatgccggtagataaactcaaataa 164  Q
    ||||||||||||||||  ||||||||||| ||||||   |||||||  |||||||||||||| |||||||||| |||||   ||||||||  ||||||||    
T  2455030 aaataagctgaaaacaggttatgaacaatgtcataa---gttttcagaagttctcccaaacagtctcacaaaacttatgttagtagataagttcaaataa 2455126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 59 - 108
Target Start/End: Original strand, 34939776 - 34939824
Alignment:
Q  59 tttatggaaataagctgaaaacaatttatgaacaatatcataagctgttt 108  Q
    |||||||||||||||||||||||||||||| || || |||||||||||||    
T  34939776 tttatggaaataagctgaaaacaatttatggac-atgtcataagctgttt 34939824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 59 - 170
Target Start/End: Original strand, 848021 - 848132
Alignment:
Q  59 tttatggaaataagctgaaaacaatttatgaacaatatcataagctgttttcat-agttctcccaaacaatctcacaaaatttatgccggtagataaact 157  Q
    |||||| |||||||||||||| |  ||| ||| ||| |||||||| ||||| || |||||| ||||||| |||||||||| ||||| |  ||||||| ||    
T  848021 tttatgaaaataagctgaaaaaagcttaagaaaaatgtcataagcagtttttataagttcttccaaacagtctcacaaaacttatg-ctatagataagct 848119  T
Q  158 caaataagtcaat 170  Q
    |||||||| ||||    
T  848120 caaataaggcaat 848132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 66 - 164
Target Start/End: Original strand, 2455298 - 2455397
Alignment:
Q  66 aaataagctgaaaacaatttatgaacaatatcataagctgttttcat-agttctcccaaacaatctcacaaaatttatgccggtagataaactcaaataa 164  Q
    ||||||||||||||||| |||| |||||| | ||||| ||||||||| ||||||| |||| | | |||| ||| |||||   |||||||| |||||||||    
T  2455298 aaataagctgaaaacaacttataaacaatgtaataagttgttttcataagttctctcaaatagtttcaccaaacttatgtttgtagataagctcaaataa 2455397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 29 - 134
Target Start/End: Original strand, 2735068 - 2735177
Alignment:
Q  29 ctataagctgttttcacaagctatctgg---aatttatggaaataagctgaaaacaatttatgaacaatatcataagctgttttcat-agttctcccaaa 124  Q
    |||||||||||||||| |||| |||| |   || ||||| |||||||| |||||||  ||||||| ||| |||||||| |||||||| |||| || ||||    
T  2735068 ctataagctgttttcataagcaatcttgaacaacttatgaaaataagccgaaaacagcttatgaaaaatgtcataagccgttttcataagttatctcaaa 2735167  T
Q  125 caatctcaca 134  Q
    || |||||||    
T  2735168 cagtctcaca 2735177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 60 - 126
Target Start/End: Complemental strand, 9912228 - 9912161
Alignment:
Q  60 ttatggaaataagctgaaaacaatttatgaacaatatcataagctgttttcat-agttctcccaaaca 126  Q
    ||||| ||||||||| ||||||  ||||||||||| |||||||||| |||||| |||||||| |||||    
T  9912228 ttatgaaaataagctcaaaacagcttatgaacaatgtcataagctggtttcataagttctccgaaaca 9912161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 60 - 165
Target Start/End: Original strand, 13907618 - 13907722
Alignment:
Q  60 ttatggaaataagctgaaaacaatttatgaacaatatcataagctgttttcat-agttctcccaaacaatctcacaaaatttatgccggtagataaactc 158  Q
    ||||| |||||| ||||||| || || |||||||| ||| ||||||||||||| | ||||| |||||  |||  ||||| |||||||  |||||||||||    
T  13907618 ttatgaaaataaactgaaaataacttgtgaacaatgtcagaagctgttttcataaattctctcaaaccgtct--caaaacttatgccactagataaactc 13907715  T
Q  159 aaataag 165  Q
    |||||||    
T  13907716 aaataag 13907722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 93 - 166
Target Start/End: Complemental strand, 26559244 - 26559169
Alignment:
Q  93 atatcataagctgttttcata-gttctcccaaacaatctcacaaaat-ttatgccggtagataaactcaaataagt 166  Q
    |||||||||| |||||||||| ||||| ||||||| |||||||||   ||||||| |||| |||||||||||||||    
T  26559244 atatcataagttgttttcataagttcttccaaacagtctcacaaatgcttatgccagtaggtaaactcaaataagt 26559169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 103 - 177
Target Start/End: Original strand, 30641821 - 30641896
Alignment:
Q  103 ctgttttcata-gttctcccaaacaatctcacaaaatttatgccggtagataaactcaaataagtcaatttaaaca 177  Q
    ||||||||||| |||||| || |||||||||||||||  ||||   |||||||||||||||||| ||||| |||||    
T  30641821 ctgttttcataagttctctcacacaatctcacaaaatgcatgcatatagataaactcaaataagccaattcaaaca 30641896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 60 - 177
Target Start/End: Complemental strand, 430414 - 430296
Alignment:
Q  60 ttatggaaataagctgaaaacaatttatgaacaatatcataagctgttttcat-agttctcccaaacaatctcacaaaatttatgccggtagataaactc 158  Q
    ||||| |||||||  |||||||| | ||||||||||||||| ||||||||  | ||||| || ||||||| | |||||| ||||||| ||| ||||  ||    
T  430414 ttatgaaaataagtcgaaaacaactgatgaacaatatcataggctgtttttgtaagttcgccgaaacaatattacaaaacttatgccagtaaataagttc 430315  T
Q  159 aaataagtcaatttaaaca 177  Q
    ||||||  |||| ||||||    
T  430314 aaataaaccaatctaaaca 430296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 97 - 170
Target Start/End: Original strand, 6538584 - 6538658
Alignment:
Q  97 cataagctgttttcat-agttctcccaaacaatctcacaaaatttatgccggtagataaactcaaataagtcaat 170  Q
    |||||||||||||||| | ||||||| |||| |||||| ||| |||||||  || ||||||||||||||| ||||    
T  6538584 cataagctgttttcatcaattctcccgaacagtctcaccaaacttatgccactacataaactcaaataagacaat 6538658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 147 - 177
Target Start/End: Complemental strand, 7351620 - 7351590
Alignment:
Q  147 gtagataaactcaaataagtcaatttaaaca 177  Q
    |||||||||||||||||||||||||||||||    
T  7351620 gtagataaactcaaataagtcaatttaaaca 7351590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 75 - 160
Target Start/End: Complemental strand, 9559444 - 9559358
Alignment:
Q  75 gaaaacaatttatgaacaatatcataagctgttttcat-agttctcccaaacaatctcacaaaatttatgccggtagataaactcaa 160  Q
    |||||||  ||||||||||| |  |||||||||||||| | |||||| ||||| |||||||||| |||||||  ||||||| |||||    
T  9559444 gaaaacagcttatgaacaatgttgtaagctgttttcataacttctcctaaacagtctcacaaaacttatgccaatagataatctcaa 9559358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 96 - 165
Target Start/End: Original strand, 30926588 - 30926658
Alignment:
Q  96 tcataagctgttttcata-gttctcccaaacaatctcacaaaatttatgccggtagataaactcaaataag 165  Q
    |||||||||||||||||| ||||| ||||||| |||||  ||||||||||| | | |||| ||||||||||    
T  30926588 tcataagctgttttcataagttcttccaaacagtctcatcaaatttatgccagaaaataagctcaaataag 30926658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 94 - 170
Target Start/End: Complemental strand, 21405157 - 21405080
Alignment:
Q  94 tatcataagctgttttcat-agttctcccaaacaatctcacaaaatttatgccggtagataaactcaaataagtcaat 170  Q
    |||||||| || ||||||| ||||| |||||| | |||||||||| ||||| | ||| |||| |||||||||||||||    
T  21405157 tatcataacctattttcattagttcccccaaatattctcacaaaacttatgtcagtatataagctcaaataagtcaat 21405080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 29 - 113
Target Start/End: Original strand, 31624089 - 31624175
Alignment:
Q  29 ctataagctgttttcacaagctatct---ggaatttatggaaataagctgaaaacaatttatgaacaatatcataagctgttttcata 113  Q
    |||||||||||||||| | |||||||    ||| ||||| ||||||| ||||||||  |||||||| || ||||||||||||||||||    
T  31624089 ctataagctgttttcataggctatcttggagaaattatgaaaataagttgaaaacagcttatgaac-atgtcataagctgttttcata 31624175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 31 - 135
Target Start/End: Original strand, 33887831 - 33887938
Alignment:
Q  31 ataagctgttttcacaagctatc-tggaat--ttatggaaataagctgaaaacaatttatgaacaatatcataagctgttttcat-agttctcccaaaca 126  Q
    |||| ||||||||| |||||||| || |||  ||||||||||||| ||||||||| || ||||| || ||||||||| ||||||| | ||||| ||||||    
T  33887831 ataaactgttttcataagctatcctgaaatgcttatggaaataagttgaaaacaacttgtgaac-atgtcataagctattttcataaattctctcaaaca 33887929  T
Q  127 atctcacaa 135  Q
    || ||||||    
T  33887930 atgtcacaa 33887938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 139 - 171
Target Start/End: Original strand, 2455923 - 2455955
Alignment:
Q  139 ttatgccggtagataaactcaaataagtcaatt 171  Q
    |||||||||||||||| ||||||||||||||||    
T  2455923 ttatgccggtagataagctcaaataagtcaatt 2455955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 60 - 92
Target Start/End: Original strand, 6536980 - 6537012
Alignment:
Q  60 ttatggaaataagctgaaaacaatttatgaaca 92  Q
    ||||||||||||||||||||||| |||||||||    
T  6536980 ttatggaaataagctgaaaacaacttatgaaca 6537012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 47; Significance: 6e-18; HSPs: 45)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 56 - 169
Target Start/End: Original strand, 2142683 - 2142797
Alignment:
Q  56 gaatttatggaaataagctgaaaacaatttatgaacaatatcataagctgttttcata-gttctcccaaacaatctcacaaaatttatgccggtagataa 154  Q
    ||||||||| ||||||||| ||||||  | ||||||| | ||| ||  |||||||||| ||||||||||||| ||||| |||| ||||||  ||||||||    
T  2142683 gaatttatgaaaataagctaaaaacagctaatgaacattgtcacaacttgttttcataagttctcccaaacagtctcataaaacttatgcatgtagataa 2142782  T
Q  155 actcaaataagtcaa 169  Q
    |||||||||||||||    
T  2142783 actcaaataagtcaa 2142797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 30 - 143
Target Start/End: Complemental strand, 40682464 - 40682348
Alignment:
Q  30 tataagctgttttcacaagctatctgga--atttatggaaataagctgaaaacaatttatgaacaatatcataagctgttttca-tagttctcccaaaca 126  Q
    ||||||| ||||||| ||| ||||| ||  | ||||| ||||||| ||||||||| ||||||||||| ||||||||| |||| |  ||||||||||||||    
T  40682464 tataagcagttttcataagatatcttgagaacttatgaaaataagttgaaaacaacttatgaacaatgtcataagctattttaacaagttctcccaaaca 40682365  T
Q  127 atctcacaaaatttatg 143  Q
    ||||||||||| |||||    
T  40682364 atctcacaaaacttatg 40682348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 29 - 165
Target Start/End: Complemental strand, 29628814 - 29628673
Alignment:
Q  29 ctataagctgttttcacaagctatctgg---aatttatggaaataagctgaaaacaatttatgaacaatatcataag-ctgttttcat-agttctcccaa 123  Q
    ||||||| |||| ||| ||||||||| |   |||||||||||||||||||||||||||||||||||||| | |||||  | |||| || |||||| |||     
T  29628814 ctataagttgttctcataagctatcttggaaaatttatggaaataagctgaaaacaatttatgaacaattttataagattttttttataagttcttccag 29628715  T
Q  124 acaatctcacaaaatttatgccggtagataaactcaaataag 165  Q
    ||  |||||||||| ||||| | |||||||| ||||||||||    
T  29628714 actgtctcacaaaacttatgacagtagataagctcaaataag 29628673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 60 - 165
Target Start/End: Original strand, 750703 - 750809
Alignment:
Q  60 ttatggaaataagctgaaaacaatttatgaacaatatcataagctgttttcat-agttctcccaaacaatctcacaaaatttatgccggtagataaactc 158  Q
    ||||| ||||||||| ||||||  ||||||||||| |||| |||| ||||||| ||||||  |||||| ||||||||||  |||||| | ||||||||||    
T  750703 ttatgcaaataagctcaaaacagcttatgaacaatgtcattagctcttttcataagttcttgcaaacactctcacaaaacatatgccaggagataaactc 750802  T
Q  159 aaataag 165  Q
    |||||||    
T  750803 aaataag 750809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 56 - 143
Target Start/End: Original strand, 36534797 - 36534885
Alignment:
Q  56 gaatttatggaaataagctgaaaacaatttatgaacaatatcataagctgttttcat-agttctcccaaacaatctcacaaaatttatg 143  Q
    ||||| ||| |||||||||||||| |  ||||||||||| | ||||||||||||||| |||| ||||||||| |||||||||| |||||    
T  36534797 gaattaatgaaaataagctgaaaatagattatgaacaattttataagctgttttcataagttatcccaaacagtctcacaaaacttatg 36534885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 87 - 170
Target Start/End: Original strand, 42419853 - 42419937
Alignment:
Q  87 tgaacaatatcataagctgttttcata-gttctcccaaacaatctcacaaaatttatgccggtagataaactcaaataagtcaat 170  Q
    |||| ||| ||||||||||||||| || ||||||||||||| ||||| |||| ||||| | | ||||||||||||||||||||||    
T  42419853 tgaaaaatgtcataagctgttttcgtaagttctcccaaacagtctcaaaaaacttatgtcagaagataaactcaaataagtcaat 42419937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 84 - 166
Target Start/End: Original strand, 449904 - 449987
Alignment:
Q  84 ttatgaacaatatcataagctgttttcata-gttctcccaaacaatctcacaaaatttatgccggtagataaactcaaataagt 166  Q
    ||||||| ||| |||||||||||||||| | || |||||||||||||||| |||| ||||||  |||||||| |||||||||||    
T  449904 ttatgaaaaatgtcataagctgttttcaaaagtcctcccaaacaatctcataaaacttatgctagtagataagctcaaataagt 449987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 60 - 126
Target Start/End: Complemental strand, 28677696 - 28677630
Alignment:
Q  60 ttatggaaataagctgaaaacaatttatgaacaatatcataagctgttttcat-agttctcccaaaca 126  Q
    |||||||||||||| |||||||| ||||||| ||| ||||||||||||||||| ||||||||||||||    
T  28677696 ttatggaaataagccgaaaacaacttatgaa-aatgtcataagctgttttcataagttctcccaaaca 28677630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 97 - 170
Target Start/End: Original strand, 27317449 - 27317523
Alignment:
Q  97 cataagctgttttcata-gttctcccaaacaatctcacaaaatttatgccggtagataaactcaaataagtcaat 170  Q
    |||||| |||||||||| |||||| |||||| ||||| |||| ||||| |||||||||| |||||||||||||||    
T  27317449 cataagttgttttcataagttctctcaaacagtctcataaaacttatgtcggtagataagctcaaataagtcaat 27317523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 36 - 135
Target Start/End: Original strand, 8017440 - 8017542
Alignment:
Q  36 ctgttttcacaagctatctgg---aatttatggaaataagctgaaaacaatttatgaacaatatcataagctgttttcat-agttctcccaaacaatctc 131  Q
    ||||||||| ||||||||| |   || ||||| ||||| || |||||||| ||||||||| ||||||||||||||||||| |||||||||||| |||| |    
T  8017440 ctgttttcataagctatcttggagaacttatgaaaatacgcagaaaacaaattatgaaca-tatcataagctgttttcataagttctcccaaataatcgc 8017538  T
Q  132 acaa 135  Q
    ||||    
T  8017539 acaa 8017542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 70 - 171
Target Start/End: Complemental strand, 5902576 - 5902476
Alignment:
Q  70 aagctgaaaacaatttatgaacaatatcataagctgttttcat-agttctcccaaacaatctcacaa-aatttatgccggtagataaactcaaataagtc 167  Q
    |||||||||||| ||||||||| || ||||||||||||||||| |||||| ||||||| ||||||||   ||||||||  |||||||  |||||||||||    
T  5902576 aagctgaaaacagtttatgaac-atgtcataagctgttttcataagttcttccaaacagtctcacaagtgtttatgcc--tagataagttcaaataagtc 5902480  T
Q  168 aatt 171  Q
    ||||    
T  5902479 aatt 5902476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 60 - 170
Target Start/End: Complemental strand, 7928336 - 7928224
Alignment:
Q  60 ttatggaaataagctgaaaacaatttatgaacaatat-cataagctgttttc-atagttctcccaaacaatctcacaaaatttatgccggtagataaact 157  Q
    ||||| ||||||||||||||||| ||||||||||| | |||||||||||||| | ||||||  | |||| ||||||| || ||||| |  ||||||| ||    
T  7928336 ttatgaaaataagctgaaaacaacttatgaacaatgtccataagctgttttcaaaagttctttctaacagtctcacacaacttatgtcaatagataagct 7928237  T
Q  158 caaataagtcaat 170  Q
    |||||||| ||||    
T  7928236 caaataagccaat 7928224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 113 - 177
Target Start/End: Complemental strand, 39073685 - 39073621
Alignment:
Q  113 agttctcccaaacaatctcacaaaatttatgccggtagataaactcaaataagtcaatttaaaca 177  Q
    |||||| ||||||| |||||||||| ||||| |||||||| ||||||||||| ||||| ||||||    
T  39073685 agttcttccaaacagtctcacaaaaattatgtcggtagatgaactcaaataaatcaatctaaaca 39073621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 60 - 132
Target Start/End: Original strand, 40279440 - 40279512
Alignment:
Q  60 ttatggaaataagctgaaaacaatttatgaacaatatcataagctgttttcatagttctcccaaacaatctca 132  Q
    ||||| ||||||| |||||||| |||||| ||||| | | ||| ||||||||||||||||||||||| |||||    
T  40279440 ttatgaaaataagttgaaaacagtttatggacaatgttaaaagttgttttcatagttctcccaaacagtctca 40279512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 60 - 170
Target Start/End: Original strand, 4606958 - 4607069
Alignment:
Q  60 ttatggaaataagctgaaaacaatttatgaacaatatcataagctgttttcata-gttctcccaaacaatctcacaaaatttatgccggtagataaactc 158  Q
    ||||| ||||||||| ||| ||  | ||||||||| ||||||| |||||||| | ||||||||||| | |||||||||| ||||   ||||||||| |||    
T  4606958 ttatgaaaataagctaaaagcagctcatgaacaatgtcataagttgttttcacaagttctcccaaatagtctcacaaaacttatattggtagataagctc 4607057  T
Q  159 aaataagtcaat 170  Q
    ||||||| ||||    
T  4607058 aaataagccaat 4607069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 66 - 161
Target Start/End: Complemental strand, 5365608 - 5365514
Alignment:
Q  66 aaataagctgaaaacaatttatgaacaatatcataagctgttttcatagttctcccaaacaatctcacaaaatttatgccggtagataaactcaaa 161  Q
    ||||||||||||||||| ||||||||||| ||| ||||||| |  | ||| ||| |||||||||  |||||| ||||||  |||||||||||||||    
T  5365608 aaataagctgaaaacaacttatgaacaatgtcaaaagctgtctata-agtcctctcaaacaatcatacaaaacttatgctagtagataaactcaaa 5365514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 96 - 170
Target Start/End: Complemental strand, 23974494 - 23974419
Alignment:
Q  96 tcataagctgttttcata-gttctcccaaacaatctcacaaaatttatgccggtagataaactcaaataagtcaat 170  Q
    |||||||||||||||||| ||||||| |||||||||||| ||  | ||| | |||||||||| |||||||||||||    
T  23974494 tcataagctgttttcataagttctccaaaacaatctcactaatctcatgtcagtagataaacccaaataagtcaat 23974419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 96 - 170
Target Start/End: Original strand, 30331820 - 30331895
Alignment:
Q  96 tcataagctgttttcata-gttctcccaaacaatctcacaaaatttatgccggtagataaactcaaataagtcaat 170  Q
    ||||||| | |||||||| ||||||||||||| |||||||||| ||||| | |||||||| || ||||||||||||    
T  30331820 tcataaggttttttcataagttctcccaaacagtctcacaaaacttatgtcagtagataagctgaaataagtcaat 30331895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 96 - 165
Target Start/End: Complemental strand, 42659212 - 42659142
Alignment:
Q  96 tcataagctgttttcatag-ttctcccaaacaatctcacaaaatttatgccggtagataaactcaaataag 165  Q
    |||||||||||||||| |  |||||||||||| |||||||||| ||||||| ||| |||| ||||||||||    
T  42659212 tcataagctgttttcaaaacttctcccaaacagtctcacaaaacttatgccagtaaataagctcaaataag 42659142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 66 - 134
Target Start/End: Original strand, 16451157 - 16451226
Alignment:
Q  66 aaataagctgaaaacaatttatgaacaatatcataagctgttttcat-agttctcccaaacaatctcaca 134  Q
    ||||||||||||||||  | ||||||||| ||||||| ||||||||| |||||||||||||  |||||||    
T  16451157 aaataagctgaaaacagctcatgaacaatgtcataagttgttttcataagttctcccaaacggtctcaca 16451226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 32 - 170
Target Start/End: Complemental strand, 26143708 - 26143568
Alignment:
Q  32 taagctgttttcacaagctatctgg---aatttatggaaataagctgaaaacaatttatgaacaatatcataagctgttttcat-agttctcccaaacaa 127  Q
    ||||||||||||| |||||| || |   || ||||| |||||||||||||| ||  | ||||||||  |||||| ||||||| | ||||||||||||||     
T  26143708 taagctgttttcataagctaacttggagaacttatgaaaataagctgaaaataacctgtgaacaatgacataagttgttttcgtaagttctcccaaacag 26143609  T
Q  128 tctcacaaaatttatgccggtagataaactcaaataagtcaat 170  Q
    |||  ||||||||||| | |||||||| |||||| ||| ||||    
T  26143608 tct--caaaatttatgtcagtagataagctcaaacaagccaat 26143568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 29 - 109
Target Start/End: Complemental strand, 29316846 - 29316764
Alignment:
Q  29 ctataagctgttttcacaagctatctgg---aatttatggaaataagctgaaaacaatttatgaacaatatcataagctgtttt 109  Q
    ||||||||||||||||  |||||||| |   || |||||||||||||||||||| || |||||||| || ||||||||||||||    
T  29316846 ctataagctgttttcatcagctatcttggagaacttatggaaataagctgaaaagaacttatgaac-atgtcataagctgtttt 29316764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 36 - 162
Target Start/End: Original strand, 3611232 - 3611362
Alignment:
Q  36 ctgttttcacaagctatct---ggaatttatggaaataagctgaaaacaatttatgaacaatatcataagctg-ttttcatagttctcccaaacaatctc 131  Q
    |||||||||||||||||||    ||| ||||| ||||||||| |||||| |||||||| ||| ||||||| || ||||| ||  ||||||||||| |||     
T  3611232 ctgttttcacaagctatcttggagaacttatgaaaataagctaaaaacagtttatgaataatgtcataagttgtttttcgtaaatctcccaaacagtctt 3611331  T
Q  132 acaaaatttatgccggtagataaactcaaat 162  Q
    || ||| |||||   |||| |||||||||||    
T  3611332 acgaaacttatgatagtagttaaactcaaat 3611362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 60 - 135
Target Start/End: Complemental strand, 12313210 - 12313135
Alignment:
Q  60 ttatggaaataagctgaaaacaatttatgaacaatatcataagctgttttcatag-ttctcccaaacaatctcacaa 135  Q
    ||||| ||||||| ||||| ||| ||||||||| |  |||||||||||||||||  |||||||||||||||||||||    
T  12313210 ttatgaaaataaggtgaaatcaacttatgaaca-tggcataagctgttttcataaattctcccaaacaatctcacaa 12313135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 87 - 177
Target Start/End: Original strand, 2416373 - 2416464
Alignment:
Q  87 tgaacaatatcataagctgttttcata-gttctcccaaacaatctcacaaaatttatgccggtagataaactcaaataagtcaatttaaaca 177  Q
    ||||||||  || |||||||||| ||| ||||| |||| || | |||||||| |||||   |||||||||||||||||||||||| ||||||    
T  2416373 tgaacaatgacaaaagctgttttaataagttcttccaagcagtttcacaaaacttatgttagtagataaactcaaataagtcaatctaaaca 2416464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 138 - 177
Target Start/End: Original strand, 6561449 - 6561488
Alignment:
Q  138 tttatgccggtagataaactcaaataagtcaatttaaaca 177  Q
    |||||||| ||||||||||||||||||||||||| |||||    
T  6561449 tttatgcccgtagataaactcaaataagtcaattcaaaca 6561488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 33 - 122
Target Start/End: Original strand, 26626876 - 26626969
Alignment:
Q  33 aagctgttttcacaagctatctgg---aatttatggaaataagctgaaaacaatttatgaacaatatcataagctgttttcat-agttctccca 122  Q
    |||||||||||| ||||||||| |   || ||||| |||||| |||||||||  ||||||||||| ||||||||| ||||| | ||||||||||    
T  26626876 aagctgttttcataagctatcttgcagaacttatgaaaataacctgaaaacagattatgaacaatgtcataagctattttcgtaagttctccca 26626969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 64 - 170
Target Start/End: Complemental strand, 41812125 - 41812018
Alignment:
Q  64 ggaaataagctgaaaacaatttatgaacaatatcataagctgttttc-atagttctcccaaacaatctcacaaaatttatgccggtagataaactcaaat 162  Q
    ||||||||| |||||| |  ||||||| ||| ||||||||||||||| | ||||||||||||||  ||||| ||| || || | | |||||| |||||||    
T  41812125 ggaaataagttgaaaaaagcttatgaaaaatgtcataagctgttttcaaaagttctcccaaacagcctcactaaacttttgactgcagataagctcaaat 41812026  T
Q  163 aagtcaat 170  Q
    ||| ||||    
T  41812025 aagccaat 41812018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 97 - 170
Target Start/End: Complemental strand, 10619220 - 10619146
Alignment:
Q  97 cataagctgttttcat-agttctcccaaacaatctcacaaaatttatgccggtagataaactcaaataagtcaat 170  Q
    |||||||||||||||| |||||||||||    |||||||||| || || | |||||||||||||||| |||||||    
T  10619220 cataagctgttttcatgagttctcccaaggggtctcacaaaacttgtgtcagtagataaactcaaatgagtcaat 10619146  T

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Target: chr2; HSP #30
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 59 - 135
Target Start/End: Original strand, 787364 - 787440
Alignment:
Q  59 tttatggaaataagctgaaaacaatttatgaacaatatcataagctgttttcat-agttctcccaaacaatctcacaa 135  Q
    |||||||| ||||||||||||||  ||||| || || ||||||||||||||||| ||||||| |||||| | ||||||    
T  787364 tttatggagataagctgaaaacagcttatggac-atgtcataagctgttttcataagttctcacaaacagtgtcacaa 787440  T

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Target: chr2; HSP #31
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 60 - 113
Target Start/End: Original strand, 1647269 - 1647321
Alignment:
Q  60 ttatggaaataagctgaaaacaatttatgaacaatatcataagctgttttcata 113  Q
    ||||||||||||||||||||||  |||||| | || ||||||||||||||||||    
T  1647269 ttatggaaataagctgaaaacagcttatgagc-atgtcataagctgttttcata 1647321  T

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Target: chr2; HSP #32
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 23 - 91
Target Start/End: Complemental strand, 3235461 - 3235390
Alignment:
Q  23 tatacactataagctgttttcacaagctatctggaa---tttatggaaataagctgaaaacaatttatgaac 91  Q
    |||| ||||||||||||||||| |  |||||| |||   |||||||||||||||||||||||  ||||||||    
T  3235461 tataaactataagctgttttcatatactatcttgaaaagtttatggaaataagctgaaaacagcttatgaac 3235390  T

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Target: chr2; HSP #33
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 66 - 162
Target Start/End: Complemental strand, 19608664 - 19608567
Alignment:
Q  66 aaataagctgaaaacaatttatgaacaatatcataagctgttttcata-gttctcccaaacaatctcacaaaatttatgccggtagataaactcaaat 162  Q
    ||||||||| |||| |  ||||||| ||| ||||||||||| || ||| |||||| |||||| ||||| ||||  |||| | ||||||||||||||||    
T  19608664 aaataagctcaaaatagcttatgaagaatgtcataagctgtgtttataagttctcgcaaacagtctcataaaacctatgtcagtagataaactcaaat 19608567  T

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Target: chr2; HSP #34
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 60 - 113
Target Start/End: Complemental strand, 35379053 - 35379001
Alignment:
Q  60 ttatggaaataagctgaaaacaatttatgaacaatatcataagctgttttcata 113  Q
    ||||| ||||||||||||||||| ||||||||||  |||| |||||||||||||    
T  35379053 ttatgaaaataagctgaaaacaacttatgaacaa-gtcatcagctgttttcata 35379001  T

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Target: chr2; HSP #35
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 60 - 113
Target Start/End: Original strand, 40279300 - 40279353
Alignment:
Q  60 ttatggaaataagctgaaaacaatttatgaacaatatcataagctgttttcata 113  Q
    ||||| |||| ||||||||||| ||||||||||||  |||||| ||||||||||    
T  40279300 ttatgaaaattagctgaaaacagtttatgaacaatgccataagttgttttcata 40279353  T

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Target: chr2; HSP #36
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 60 - 113
Target Start/End: Original strand, 40279370 - 40279423
Alignment:
Q  60 ttatggaaataagctgaaaacaatttatgaacaatatcataagctgttttcata 113  Q
    ||||| |||| ||||||||||| ||||||||||||  |||||| ||||||||||    
T  40279370 ttatgaaaattagctgaaaacagtttatgaacaatgccataagttgttttcata 40279423  T

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Target: chr2; HSP #37
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 60 - 113
Target Start/End: Original strand, 41817201 - 41817253
Alignment:
Q  60 ttatggaaataagctgaaaacaatttatgaacaatatcataagctgttttcata 113  Q
    ||||||||||||||||||||||| |||| ||| || ||||||| ||||||||||    
T  41817201 ttatggaaataagctgaaaacaaattatcaac-atgtcataagatgttttcata 41817253  T

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Target: chr2; HSP #38
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 60 - 113
Target Start/End: Complemental strand, 43065487 - 43065435
Alignment:
Q  60 ttatggaaataagctgaaaacaatttatgaacaatatcataagctgttttcata 113  Q
    |||| |||||||||||||||||||||||| || || ||||||| ||||||||||    
T  43065487 ttattgaaataagctgaaaacaatttatggac-atgtcataagttgttttcata 43065435  T

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Target: chr2; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 96 - 135
Target Start/End: Original strand, 1801736 - 1801776
Alignment:
Q  96 tcataagctgttttcata-gttctcccaaacaatctcacaa 135  Q
    |||||||||||||||||| ||||||||||||||| ||||||    
T  1801736 tcataagctgttttcataagttctcccaaacaatatcacaa 1801776  T

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Target: chr2; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 60 - 143
Target Start/End: Complemental strand, 7035604 - 7035520
Alignment:
Q  60 ttatggaaataagctgaaaacaatttatgaacaatatcataagctgttttcat-agttctcccaaacaatctcacaaaatttatg 143  Q
    ||||| |||||||| |||||||  ||||||||  | ||||||||||||| ||| |||||| | ||||| |||||||||| |||||    
T  7035604 ttatgaaaataagcggaaaacaccttatgaactgtgtcataagctgtttccataagttcttcaaaacagtctcacaaaacttatg 7035520  T

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Target: chr2; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 61 - 113
Target Start/End: Original strand, 33256774 - 33256825
Alignment:
Q  61 tatggaaataagctgaaaacaatttatgaacaatatcataagctgttttcata 113  Q
    |||| ||||||||||| |||| ||||||||| || ||||||||||||||||||    
T  33256774 tatgaaaataagctgagaacagtttatgaac-atgtcataagctgttttcata 33256825  T

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Target: chr2; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 139 - 175
Target Start/End: Original strand, 35809980 - 35810016
Alignment:
Q  139 ttatgccggtagataaactcaaataagtcaatttaaa 175  Q
    |||||||||||||||| ||||||||||||||| ||||    
T  35809980 ttatgccggtagataagctcaaataagtcaatctaaa 35810016  T

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Target: chr2; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 60 - 135
Target Start/End: Original strand, 40158751 - 40158826
Alignment:
Q  60 ttatggaaataagctgaaaacaatttatgaacaatatcataagctgttttcat-agttctcccaaacaatctcacaa 135  Q
    ||||| || |||||||||||||| |||| |||| | ||||||||||||||||| ||||| ||||| || ||||||||    
T  40158751 ttatgtaattaagctgaaaacaacttataaaca-tgtcataagctgttttcataagttcccccaatcagtctcacaa 40158826  T

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Target: chr2; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 60 - 92
Target Start/End: Original strand, 42420030 - 42420062
Alignment:
Q  60 ttatggaaataagctgaaaacaatttatgaaca 92  Q
    |||||||||| ||||||||||||||||||||||    
T  42420030 ttatggaaatgagctgaaaacaatttatgaaca 42420062  T

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Target: chr2; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 63 - 111
Target Start/End: Complemental strand, 44438873 - 44438826
Alignment:
Q  63 tggaaataagctgaaaacaatttatgaacaatatcataagctgttttca 111  Q
    |||||||||||||||||||  |||||||| || ||||||||||||||||    
T  44438873 tggaaataagctgaaaacaggttatgaac-atgtcataagctgttttca 44438826  T

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Target: scaffold0057 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 87 - 164
Target Start/End: Original strand, 24681 - 24759
Alignment:
Q  87 tgaacaatatcataagctgttttcata-gttctcccaaacaatctcacaaaatttatgccggtagataaactcaaataa 164  Q
    |||| ||| |||||||||||||| ||| ||||||||||||| ||||||||||  ||||||  ||||||  |||||||||    
T  24681 tgaagaatgtcataagctgttttgataagttctcccaaacagtctcacaaaacatatgccaatagatacgctcaaataa 24759  T

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Target: scaffold0528 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0528
Description:

Target: scaffold0528; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 84 - 160
Target Start/End: Complemental strand, 995 - 918
Alignment:
Q  84 ttatgaacaatatcataagctgttttcata-gttctcccaaacaatctcacaaaatttatgccggtagataaactcaa 160  Q
    ||||||| ||| ||||||||| |||| ||| ||| ||| ||||| | |||||||| |||||||||||||||| |||||    
T  995 ttatgaaaaatgtcataagctatttttataagttgtccaaaacagtatcacaaaacttatgccggtagataagctcaa 918  T

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Target: scaffold0110 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0110
Description:

Target: scaffold0110; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 116 - 177
Target Start/End: Complemental strand, 33893 - 33832
Alignment:
Q  116 tctcccaaacaatctcacaaaatttatgccggtagataaactcaaataagtcaatttaaaca 177  Q
    ||||| ||||||||||| | |  ||||| | ||||||||| |||||||||||||||||||||    
T  33893 tctcctaaacaatctcaaagagcttatgtcagtagataaattcaaataagtcaatttaaaca 33832  T

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