View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF3327_high_45 (Length: 250)
Name: NF3327_high_45
Description: NF3327
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3327_high_45 |
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Alignment Details
Target: chr5 (Bit Score: 188; Significance: 1e-102; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 188; E-Value: 1e-102
Query Start/End: Original strand, 1 - 242
Target Start/End: Original strand, 37047410 - 37047643
Alignment:
| Q |
1 |
tctgcaaatatgtagtatccaattcagttaagaataaaagctactatactattatgacatgattttacattagaaaacatggcagctgatatattatcat |
100 |
Q |
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| T |
37047410 |
tctgcaaatatttagtatccaaatcagttaagaataaaagctactatactattatgacattattttacattagaaaacatggcagctgatatattatcat |
37047509 |
T |
|
| Q |
101 |
aagaaataaactgaacattttatttagacaaaaaatcgactgaacatatactattaacaatttagatgtgcgtctatatgtagtagaaagaataatgcaa |
200 |
Q |
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||||||||||||||||||||| ||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
37047510 |
aagaaataaactgaacatttt-ttttgacaaaaaatcgactgaa-------tattaacaatttagatgtgcgtctatatgtagtagaaagaataatgcaa |
37047601 |
T |
|
| Q |
201 |
acaatatcaatatggaaacaataacagttttctcattctctg |
242 |
Q |
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|||||||||||||| ||||||||||||||||||||||||||| |
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| T |
37047602 |
acaatatcaatatgtaaacaataacagttttctcattctctg |
37047643 |
T |
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