View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF3327_high_5 (Length: 510)

Name: NF3327_high_5
Description: NF3327
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF3327_high_5
NF3327_high_5
[»] chr1 (43 HSPs)
chr1 (59-502)||(4878574-4879028)
chr1 (282-354)||(1188681-1188753)
chr1 (281-358)||(24600403-24600480)
chr1 (282-362)||(19283540-19283620)
chr1 (282-358)||(37850689-37850765)
chr1 (284-354)||(1187457-1187527)
chr1 (289-355)||(44290550-44290616)
chr1 (282-348)||(50469180-50469246)
chr1 (290-355)||(3550721-3550786)
chr1 (282-355)||(5320057-5320130)
chr1 (282-355)||(17294570-17294643)
chr1 (290-355)||(22793279-22793344)
chr1 (282-351)||(34649431-34649500)
chr1 (282-355)||(41157368-41157441)
chr1 (282-355)||(41184517-41184590)
chr1 (288-340)||(47379892-47379944)
chr1 (295-355)||(50052115-50052175)
chr1 (289-357)||(50556451-50556519)
chr1 (281-340)||(24132092-24132151)
chr1 (289-355)||(3537239-3537305)
chr1 (289-355)||(32594808-32594874)
chr1 (282-324)||(35154162-35154204)
chr1 (282-355)||(37556104-37556178)
chr1 (289-355)||(44290917-44290983)
chr1 (282-355)||(5996963-5997036)
chr1 (295-355)||(9955913-9955974)
chr1 (282-355)||(22077587-22077660)
chr1 (282-355)||(26661614-26661687)
chr1 (282-355)||(29798192-29798265)
chr1 (282-355)||(34364500-34364573)
chr1 (289-350)||(41142372-41142433)
chr1 (304-369)||(44091909-44091974)
chr1 (282-354)||(26661991-26662063)
chr1 (311-358)||(10351182-10351229)
chr1 (289-355)||(45084382-45084448)
chr1 (282-355)||(66564-66637)
chr1 (282-355)||(24448270-24448343)
chr1 (282-355)||(34364918-34364991)
chr1 (290-355)||(40082408-40082473)
chr1 (282-326)||(22077243-22077287)
chr1 (295-363)||(35530398-35530466)
chr1 (295-355)||(37555736-37555796)
chr1 (322-354)||(50081150-50081182)
[»] chr8 (32 HSPs)
chr8 (282-356)||(4154371-4154445)
chr8 (279-346)||(20995502-20995569)
chr8 (282-352)||(4154761-4154831)
chr8 (280-355)||(9620768-9620843)
chr8 (281-352)||(41972150-41972221)
chr8 (289-355)||(3669687-3669753)
chr8 (282-350)||(3038387-3038455)
chr8 (282-373)||(8918838-8918929)
chr8 (282-328)||(147822-147868)
chr8 (289-355)||(45122002-45122068)
chr8 (284-358)||(45122146-45122220)
chr8 (282-355)||(5420644-5420717)
chr8 (282-355)||(9309348-9309421)
chr8 (295-340)||(40518588-40518633)
chr8 (305-354)||(44358163-44358212)
chr8 (282-355)||(9308970-9309045)
chr8 (282-350)||(9608738-9608806)
chr8 (296-355)||(70366-70425)
chr8 (282-340)||(6876969-6877028)
chr8 (296-355)||(34835216-34835275)
chr8 (296-355)||(41416263-41416322)
chr8 (289-355)||(1014337-1014403)
chr8 (295-340)||(147457-147502)
chr8 (289-350)||(3670060-3670121)
chr8 (289-338)||(6731904-6731953)
chr8 (283-328)||(12283867-12283912)
chr8 (302-355)||(20870665-20870718)
chr8 (282-355)||(25561908-25561981)
chr8 (282-355)||(30359602-30359675)
chr8 (295-372)||(43274854-43274931)
chr8 (295-355)||(18372791-18372851)
chr8 (299-355)||(25561736-25561792)
[»] chr4 (35 HSPs)
chr4 (282-355)||(11348418-11348491)
chr4 (282-358)||(28034222-28034298)
chr4 (295-355)||(15841074-15841134)
chr4 (282-348)||(1731744-1731810)
chr4 (283-355)||(44620654-44620726)
chr4 (289-355)||(54017685-54017751)
chr4 (282-355)||(3244541-3244614)
chr4 (282-355)||(25483329-25483402)
chr4 (295-348)||(49302910-49302963)
chr4 (282-355)||(52884880-52884953)
chr4 (282-350)||(52884688-52884756)
chr4 (281-355)||(2740692-2740766)
chr4 (282-372)||(50002419-50002509)
chr4 (282-355)||(3341121-3341194)
chr4 (282-355)||(4390191-4390264)
chr4 (282-355)||(10245913-10245986)
chr4 (282-355)||(39404391-39404464)
chr4 (282-358)||(12197371-12197447)
chr4 (303-355)||(15841458-15841510)
chr4 (290-358)||(16888903-16888971)
chr4 (282-350)||(22183359-22183427)
chr4 (289-357)||(23556954-23557022)
chr4 (295-358)||(20826223-20826286)
chr4 (282-349)||(39792956-39793023)
chr4 (289-355)||(2741071-2741137)
chr4 (289-355)||(6975546-6975612)
chr4 (320-354)||(39099845-39099879)
chr4 (282-340)||(41707569-41707627)
chr4 (282-355)||(4955407-4955480)
chr4 (282-362)||(43174499-43174580)
chr4 (282-355)||(49076538-49076611)
chr4 (295-355)||(760195-760255)
chr4 (282-350)||(3700358-3700426)
chr4 (295-355)||(50459727-50459787)
chr4 (299-355)||(54343091-54343147)
[»] chr2 (37 HSPs)
chr2 (281-355)||(33561543-33561617)
chr2 (282-355)||(33953863-33953936)
chr2 (281-355)||(962590-962664)
chr2 (282-351)||(29873633-29873702)
chr2 (289-355)||(7598609-7598675)
chr2 (282-348)||(33954360-33954426)
chr2 (295-348)||(29874122-29874175)
chr2 (282-355)||(30323457-30323530)
chr2 (282-355)||(42514642-42514715)
chr2 (295-355)||(40733523-40733583)
chr2 (282-355)||(41678459-41678534)
chr2 (282-349)||(31468844-31468911)
chr2 (289-355)||(5543090-5543156)
chr2 (289-355)||(36178697-36178763)
chr2 (282-340)||(36785670-36785728)
chr2 (289-355)||(37106188-37106254)
chr2 (281-326)||(16590880-16590925)
chr2 (282-355)||(28254329-28254402)
chr2 (282-355)||(28531406-28531479)
chr2 (282-355)||(30313171-30313243)
chr2 (282-355)||(37632689-37632762)
chr2 (282-355)||(38796310-38796383)
chr2 (282-355)||(38796712-38796785)
chr2 (295-355)||(6421391-6421451)
chr2 (282-358)||(40679718-40679794)
chr2 (284-355)||(35580815-35580886)
chr2 (282-372)||(6712969-6713059)
chr2 (282-324)||(12529151-12529193)
chr2 (289-355)||(14745759-14745825)
chr2 (282-340)||(16542442-16542500)
chr2 (289-355)||(41283567-41283633)
chr2 (282-355)||(15880256-15880329)
chr2 (282-355)||(29676896-29676969)
chr2 (289-350)||(37105924-37105985)
chr2 (323-355)||(2336658-2336690)
chr2 (297-357)||(34481274-34481334)
chr2 (282-326)||(43443103-43443147)
[»] chr5 (27 HSPs)
chr5 (282-372)||(12662727-12662817)
chr5 (282-355)||(31509616-31509689)
chr5 (282-355)||(36522329-36522402)
chr5 (292-355)||(41170637-41170700)
chr5 (290-340)||(36522003-36522053)
chr5 (282-355)||(15370092-15370165)
chr5 (282-355)||(36492309-36492382)
chr5 (295-355)||(18603212-18603272)
chr5 (284-356)||(35150002-35150074)
chr5 (282-354)||(36568660-36568732)
chr5 (282-340)||(26074253-26074311)
chr5 (282-355)||(1028609-1028682)
chr5 (282-355)||(13415852-13415925)
chr5 (297-350)||(35914857-35914910)
chr5 (282-331)||(36527199-36527248)
chr5 (290-350)||(299490-299550)
chr5 (303-355)||(31509745-31509797)
chr5 (289-340)||(32487394-32487445)
chr5 (295-350)||(38427554-38427609)
chr5 (295-357)||(300965-301027)
chr5 (289-355)||(9498746-9498812)
chr5 (282-340)||(26074889-26074947)
chr5 (289-355)||(40296407-40296473)
chr5 (282-355)||(6224189-6224262)
chr5 (282-327)||(24489324-24489369)
chr5 (282-355)||(41632775-41632848)
chr5 (295-355)||(26074324-26074384)
[»] chr3 (37 HSPs)
chr3 (273-358)||(8327888-8327973)
chr3 (284-355)||(39336321-39336392)
chr3 (282-358)||(43346880-43346956)
chr3 (281-340)||(33803359-33803418)
chr3 (282-340)||(39914245-39914303)
chr3 (281-358)||(33175753-33175830)
chr3 (282-355)||(47965007-47965080)
chr3 (281-354)||(54451269-54451342)
chr3 (295-358)||(25991409-25991472)
chr3 (295-358)||(36986037-36986100)
chr3 (295-358)||(37011476-37011539)
chr3 (284-358)||(29644670-29644744)
chr3 (282-372)||(42342463-42342553)
chr3 (282-372)||(47964593-47964683)
chr3 (282-339)||(2299969-2300026)
chr3 (282-355)||(15773185-15773258)
chr3 (282-355)||(25739517-25739590)
chr3 (282-355)||(31190010-31190083)
chr3 (282-355)||(35946515-35946588)
chr3 (282-355)||(54017908-54017981)
chr3 (281-357)||(46546415-46546491)
chr3 (289-369)||(50612530-50612610)
chr3 (282-329)||(12747870-12747917)
chr3 (289-340)||(22304246-22304297)
chr3 (320-355)||(30399666-30399701)
chr3 (282-341)||(53577357-53577416)
chr3 (323-357)||(2417351-2417385)
chr3 (289-355)||(21832435-21832501)
chr3 (282-324)||(22304071-22304113)
chr3 (281-355)||(25317150-25317224)
chr3 (282-372)||(25755387-25755477)
chr3 (282-340)||(43346643-43346701)
chr3 (282-356)||(52634669-52634743)
chr3 (282-355)||(29644994-29645067)
chr3 (290-355)||(53118066-53118131)
chr3 (295-355)||(11661541-11661601)
chr3 (282-326)||(33809129-33809173)
[»] chr6 (27 HSPs)
chr6 (282-354)||(6071125-6071197)
chr6 (282-354)||(8481920-8481991)
chr6 (282-354)||(33605647-33605719)
chr6 (281-355)||(10911557-10911632)
chr6 (289-355)||(3409259-3409325)
chr6 (282-355)||(2579964-2580037)
chr6 (282-355)||(12092574-12092647)
chr6 (295-355)||(9062441-9062501)
chr6 (289-348)||(33605975-33606034)
chr6 (289-355)||(2378126-2378192)
chr6 (289-355)||(3409660-3409726)
chr6 (289-355)||(26544049-26544115)
chr6 (289-355)||(29518503-29518569)
chr6 (289-355)||(29518920-29518986)
chr6 (289-355)||(32741179-32741245)
chr6 (282-350)||(16454900-16454968)
chr6 (289-348)||(12071790-12071849)
chr6 (289-340)||(14748445-14748496)
chr6 (289-355)||(593801-593867)
chr6 (289-355)||(35210204-35210270)
chr6 (295-340)||(1950292-1950337)
chr6 (282-355)||(2578535-2578607)
chr6 (289-350)||(3058226-3058287)
chr6 (295-340)||(3415464-3415509)
chr6 (282-355)||(16108056-16108129)
chr6 (295-355)||(2377760-2377820)
chr6 (295-355)||(32460672-32460732)
[»] chr7 (32 HSPs)
chr7 (282-355)||(1085708-1085781)
chr7 (282-355)||(30245487-30245560)
chr7 (299-358)||(10341842-10341901)
chr7 (284-350)||(36622955-36623021)
chr7 (282-355)||(7517573-7517646)
chr7 (282-355)||(7554018-7554091)
chr7 (282-355)||(22566754-22566827)
chr7 (282-372)||(23452-23542)
chr7 (282-340)||(118408-118466)
chr7 (282-355)||(30255332-30255405)
chr7 (282-355)||(34218126-34218199)
chr7 (282-339)||(40094502-40094559)
chr7 (282-355)||(45434629-45434702)
chr7 (282-350)||(43241488-43241556)
chr7 (289-340)||(14681510-14681561)
chr7 (282-354)||(37345909-37345983)
chr7 (284-355)||(40230383-40230454)
chr7 (282-340)||(30244694-30244752)
chr7 (289-355)||(37533102-37533168)
chr7 (282-372)||(45433234-45433324)
chr7 (282-355)||(16569189-16569262)
chr7 (282-355)||(16596400-16596473)
chr7 (282-355)||(22567131-22567203)
chr7 (289-350)||(29157565-29157626)
chr7 (282-355)||(30244263-30244336)
chr7 (282-355)||(36109009-36109082)
chr7 (282-355)||(36534876-36534949)
chr7 (282-355)||(41910686-41910759)
chr7 (296-372)||(11845198-11845274)
chr7 (282-350)||(24177428-24177496)
chr7 (282-350)||(30245070-30245138)
chr7 (295-355)||(47129101-47129161)
[»] scaffold0113 (1 HSPs)
scaffold0113 (282-354)||(39831-39903)
[»] scaffold0702 (2 HSPs)
scaffold0702 (289-355)||(234-300)
scaffold0702 (295-355)||(606-666)
[»] scaffold0171 (1 HSPs)
scaffold0171 (282-340)||(17563-17621)
[»] scaffold0734 (2 HSPs)
scaffold0734 (282-355)||(5389-5462)
scaffold0734 (282-355)||(5770-5843)
[»] scaffold0391 (1 HSPs)
scaffold0391 (282-341)||(3091-3150)
[»] scaffold0078 (1 HSPs)
scaffold0078 (282-355)||(5350-5423)


Alignment Details
Target: chr1 (Bit Score: 305; Significance: 1e-171; HSPs: 43)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 305; E-Value: 1e-171
Query Start/End: Original strand, 59 - 502
Target Start/End: Original strand, 4878574 - 4879028
Alignment:
Q  59 tcagttataaactatagttgatgtgtgttgtacaacagtttctttttcctcaaaagttttaacatcaaattcagcttagaggcaaggtttgaggagtagg 158  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||    
T  4878574 tcagttataaactatagttgatgtgtgttttacaacagtttctttttcctcaaaagttttaaaatcaaattcagcttagaggcaaggtttgaggattagg 4878673  T
Q  159 attgttgaactgctatgtcttataacaaaaaagagaaatcagagaagtatgaatgatgttagaactggcaaattagtaaatctaaactccactgagaagt 258  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |    
T  4878674 attgttgaactgctatgtcttataacaaaaaagagaaatcagagaagtatgaatgatgttagaactggcaaattagtaaatct-aactccactgagaaat 4878772  T
Q  259 cacaatattatttatgaaattcatgttgtatgcaattgtgagttatatgtcccacatcagataaaaaagtggaggttgaacattttataagtgagagaac 358  Q
    |||||||||||| |||||||||||||||| |||||||||||||||||||| ||||||| ||||||| |||| || |||||||||||||||||||||||||    
T  4878773 cacaatattattgatgaaattcatgttgtgtgcaattgtgagttatatgttccacatcggataaaatagtgaagcttgaacattttataagtgagagaac 4878872  T
Q  359 acatgaatctattgaacacactagatggagaggtgttgtgtgca-----------tttgacccattaaacttgaacacaatgcttttcctttaacgtgt- 446  Q
    ||||||||||||||||||||||||||||||||||||||||||||           | ||||||||||||||||||||||| |||||||||| || ||||     
T  4878873 acatgaatctattgaacacactagatggagaggtgttgtgtgcatgtgtgaattgtatgacccattaaacttgaacacaacgcttttccttaaatgtgta 4878972  T
Q  447 gnnnnnnngcttttaagtcatagtattttctttcaaaatttattttaggttcttct 502  Q
            ||||||||||  ||||||||||||||||||| ||||||||||||||||    
T  4878973 cgttttttgcttttaagttgtagtattttctttcaaaatgtattttaggttcttct 4879028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 282 - 354
Target Start/End: Complemental strand, 1188753 - 1188681
Alignment:
Q  282 tgttgtatgcaattgtgagttatatgtcccacatcagataaaaaagtggaggttgaacattttataagtgaga 354  Q
    |||||| ||||| |||||||||||||| ||| ||| |||| |||||||||||||||| |||||||||||||||    
T  1188753 tgttgtgtgcaagtgtgagttatatgttccatatcggatagaaaagtggaggttgaatattttataagtgaga 1188681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 281 - 358
Target Start/End: Complemental strand, 24600480 - 24600403
Alignment:
Q  281 atgttgtatgcaattgtgagttatatgtcccacatcagataaaaaagtggaggttgaacattttataagtgagagaac 358  Q
    ||||||| ||||| |||||||||||||||||| ||| |||| ||||||  ||||||||||| |||||||| |||||||    
T  24600480 atgttgtgtgcaagtgtgagttatatgtcccatatcggatagaaaagtaaaggttgaacatattataagtaagagaac 24600403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 282 - 362
Target Start/End: Complemental strand, 19283620 - 19283540
Alignment:
Q  282 tgttgtatgcaattgtgagttatatgtcccacatcagataaaaaagtggaggttgaacattttataagtgagagaacacat 362  Q
    |||||| ||||| |||||||||||||||||||| | |||| ||||||||||||||| || ||| ||| |||||| ||||||    
T  19283620 tgttgtgtgcaagtgtgagttatatgtcccacaccggatagaaaagtggaggttgagcactttgtaaatgagaggacacat 19283540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 282 - 358
Target Start/End: Complemental strand, 37850765 - 37850689
Alignment:
Q  282 tgttgtatgcaattgtgagttatatgtcccacatcagataaaaaagtggaggttgaacattttataagtgagagaac 358  Q
    |||||| ||||| ||||||||||||||||||||||  |||||| ||| |||||||||||  |||||||| |||||||    
T  37850765 tgttgtgtgcaagtgtgagttatatgtcccacatcgcataaaacagtagaggttgaacaccttataagtaagagaac 37850689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 284 - 354
Target Start/End: Complemental strand, 1187527 - 1187457
Alignment:
Q  284 ttgtatgcaattgtgagttatatgtcccacatcagataaaaaagtggaggttgaacattttataagtgaga 354  Q
    |||| ||||| ||||| ||||||||| ||||||  ||| ||||||||||||| ||||||||||||||||||    
T  1187527 ttgtgtgcaagtgtgaattatatgtctcacatcgaatataaaagtggaggttaaacattttataagtgaga 1187457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 289 - 355
Target Start/End: Complemental strand, 44290616 - 44290550
Alignment:
Q  289 tgcaattgtgagttatatgtcccacatcagataaaaaagtggaggttgaacattttataagtgagag 355  Q
    ||||| |||||||||||||||||||||| ||||||| |||  ||||||||||| |||||||| ||||    
T  44290616 tgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacatcttataagtaagag 44290550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 282 - 348
Target Start/End: Complemental strand, 50469246 - 50469180
Alignment:
Q  282 tgttgtatgcaattgtgagttatatgtcccacatcagataaaaaagtggaggttgaacattttataa 348  Q
    |||||| ||||| |||||||||||||||| ||||||||||| |||||  |||||||||| |||||||    
T  50469246 tgttgtgtgcaagtgtgagttatatgtcctacatcagataataaagtaaaggttgaacactttataa 50469180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 290 - 355
Target Start/End: Original strand, 3550721 - 3550786
Alignment:
Q  290 gcaattgtgagttatatgtcccacatcagataaaaaagtggaggttgaacattttataagtgagag 355  Q
    |||| |||||||||||||||||||||||||||||| |||  ||||||||||  |||||||| ||||    
T  3550721 gcaagtgtgagttatatgtcccacatcagataaaatagtaaaggttgaacaccttataagtaagag 3550786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 282 - 355
Target Start/End: Complemental strand, 5320130 - 5320057
Alignment:
Q  282 tgttgtatgcaattgtgagttatatgtcccacatcagataaaaaagtggaggttgaacattttataagtgagag 355  Q
    |||||||||||| |||||||||||||| ||||||| |||| ||||||  | ||||||||  |||||||||||||    
T  5320130 tgttgtatgcaagtgtgagttatatgttccacatcggatagaaaagtaaaagttgaacaccttataagtgagag 5320057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 282 - 355
Target Start/End: Original strand, 17294570 - 17294643
Alignment:
Q  282 tgttgtatgcaattgtgagttatatgtcccacatcagataaaaaagtggaggttgaacattttataagtgagag 355  Q
    |||||| | ||| |||||||||||||||||||||| ||||||| |||  |||||||||| ||||||||| ||||    
T  17294570 tgttgtgtacaagtgtgagttatatgtcccacatcggataaaagagtaaaggttgaacactttataagtaagag 17294643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 290 - 355
Target Start/End: Original strand, 22793279 - 22793344
Alignment:
Q  290 gcaattgtgagttatatgtcccacatcagataaaaaagtggaggttgaacattttataagtgagag 355  Q
    |||| ||||||||||||||||||||||  ||| |||||| ||||||||| | ||||||||||||||    
T  22793279 gcaagtgtgagttatatgtcccacatcgtatagaaaagtagaggttgaaaactttataagtgagag 22793344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 282 - 351
Target Start/End: Original strand, 34649431 - 34649500
Alignment:
Q  282 tgttgtatgcaattgtgagttatatgtcccacatcagataaaaaagtggaggttgaacattttataagtg 351  Q
    |||||||| ||| |||||||||||||||||||||| ||||||| |||  ||||||||||  |||||||||    
T  34649431 tgttgtatacaagtgtgagttatatgtcccacatcggataaaagagtaaaggttgaacaccttataagtg 34649500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 282 - 355
Target Start/End: Original strand, 41157368 - 41157441
Alignment:
Q  282 tgttgtatgcaattgtgagttatatgtcccacatcagataaaaaagtggaggttgaacattttataagtgagag 355  Q
    |||||| ||||| |||||||||||||||||||||||||||||| |||  | ||||||||  |||||||| ||||    
T  41157368 tgttgtgtgcaagtgtgagttatatgtcccacatcagataaaagagtaaaagttgaacaccttataagtaagag 41157441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 282 - 355
Target Start/End: Complemental strand, 41184590 - 41184517
Alignment:
Q  282 tgttgtatgcaattgtgagttatatgtcccacatcagataaaaaagtggaggttgaacattttataagtgagag 355  Q
    |||||| ||||| ||||||||||||||| |||||| ||||||| |||  |||||||||| ||||||||| ||||    
T  41184590 tgttgtgtgcaagtgtgagttatatgtctcacatcggataaaatagtaaaggttgaacactttataagtaagag 41184517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 288 - 340
Target Start/End: Complemental strand, 47379944 - 47379892
Alignment:
Q  288 atgcaattgtgagttatatgtcccacatcagataaaaaagtggaggttgaaca 340  Q
    |||||| |||||||||||| ||||||||| |||| ||||||||||||||||||    
T  47379944 atgcaagtgtgagttatatatcccacatcggatagaaaagtggaggttgaaca 47379892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 295 - 355
Target Start/End: Complemental strand, 50052175 - 50052115
Alignment:
Q  295 tgtgagttatatgtcccacatcagataaaaaagtggaggttgaacattttataagtgagag 355  Q
    |||||||||||||||||||||| ||||||| |||  ||||||||||| |||||||| ||||    
T  50052175 tgtgagttatatgtcccacatcggataaaatagtaaaggttgaacatcttataagtaagag 50052115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 289 - 357
Target Start/End: Original strand, 50556451 - 50556519
Alignment:
Q  289 tgcaattgtgagttatatgtcccacatcagataaaaaagtggaggttgaacattttataagtgagagaa 357  Q
    ||||| |||| ||||||| || ||||||| ||| ||||| |||||||||||| ||||||||||||||||    
T  50556451 tgcaagtgtgggttatatatcacacatcatatagaaaagcggaggttgaacaatttataagtgagagaa 50556519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 281 - 340
Target Start/End: Complemental strand, 24132151 - 24132092
Alignment:
Q  281 atgttgtatgcaattgtgagttatatgtcccacatcagataaaaaagtggaggttgaaca 340  Q
    ||||||||||||| ||||||||||||||||| |||| |||| ||||||  ||||||||||    
T  24132151 atgttgtatgcaactgtgagttatatgtccctcatcggatagaaaagtaaaggttgaaca 24132092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 289 - 355
Target Start/End: Complemental strand, 3537305 - 3537239
Alignment:
Q  289 tgcaattgtgagttatatgtcccacatcagataaaaaagtggaggttgaacattttataagtgagag 355  Q
    ||||| |||||||||||||||||||||| ||||||| |||  ||||||||||  |||||||| ||||    
T  3537305 tgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacaccttataagtaagag 3537239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 289 - 355
Target Start/End: Complemental strand, 32594874 - 32594808
Alignment:
Q  289 tgcaattgtgagttatatgtcccacatcagataaaaaagtggaggttgaacattttataagtgagag 355  Q
    ||||| |||||||||||||||| ||||||||||||| |||  ||||||||||  |||||||| ||||    
T  32594874 tgcaagtgtgagttatatgtcctacatcagataaaatagtaaaggttgaacaccttataagtaagag 32594808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 282 - 324
Target Start/End: Complemental strand, 35154204 - 35154162
Alignment:
Q  282 tgttgtatgcaattgtgagttatatgtcccacatcagataaaa 324  Q
    |||||| ||||| ||||||||||||||||||||||||||||||    
T  35154204 tgttgtgtgcaagtgtgagttatatgtcccacatcagataaaa 35154162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 282 - 355
Target Start/End: Original strand, 37556104 - 37556178
Alignment:
Q  282 tgttgtatgcaattgtgagttatatgtcccacatcagataaaaa-agtggaggttgaacattttataagtgagag 355  Q
    |||||| | ||| |||||||||||||||||||||| |||||||| |||  ||||||||||| |||||||| ||||    
T  37556104 tgttgtgtacaagtgtgagttatatgtcccacatcggataaaaatagtaaaggttgaacatcttataagtaagag 37556178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 289 - 355
Target Start/End: Complemental strand, 44290983 - 44290917
Alignment:
Q  289 tgcaattgtgagttatatgtcccacatcagataaaaaagtggaggttgaacattttataagtgagag 355  Q
    ||||| |||||||||||||||||||||| ||||||| |||  ||||||||||  |||||||| ||||    
T  44290983 tgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacaccttataagtaagag 44290917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 282 - 355
Target Start/End: Complemental strand, 5997036 - 5996963
Alignment:
Q  282 tgttgtatgcaattgtgagttatatgtcccacatcagataaaaaagtggaggttgaacattttataagtgagag 355  Q
    |||||| |||||  ||| |||||||||||||||| || || |||||||| | ||||||||||||||| ||||||    
T  5997036 tgttgtgtgcaagcgtgggttatatgtcccacataagttagaaaagtggtgcttgaacattttataaatgagag 5996963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 295 - 355
Target Start/End: Original strand, 9955913 - 9955974
Alignment:
Q  295 tgtgagttatatgtcccacatcagat-aaaaaagtggaggttgaacattttataagtgagag 355  Q
    |||||||||||||||||||||||||| ||||||||  ||||||||||  |||||||| ||||    
T  9955913 tgtgagttatatgtcccacatcagataaaaaaagtaaaggttgaacacattataagtaagag 9955974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 282 - 355
Target Start/End: Complemental strand, 22077660 - 22077587
Alignment:
Q  282 tgttgtatgcaattgtgagttatatgtcccacatcagataaaaaagtggaggttgaacattttataagtgagag 355  Q
    |||||| ||||| ||||||||||||||| |||||| |||| ||||||  ||||||||||  |||||||| ||||    
T  22077660 tgttgtgtgcaagtgtgagttatatgtctcacatcggatagaaaagtaaaggttgaacaccttataagtaagag 22077587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 282 - 355
Target Start/End: Complemental strand, 26661687 - 26661614
Alignment:
Q  282 tgttgtatgcaattgtgagttatatgtcccacatcagataaaaaagtggaggttgaacattttataagtgagag 355  Q
    |||||| | ||| |||||||||||||||||||||| | ||||| |||  ||||||||||  |||||||||||||    
T  26661687 tgttgtgtacaagtgtgagttatatgtcccacatcgggtaaaagagtaaaggttgaacaccttataagtgagag 26661614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 282 - 355
Target Start/End: Original strand, 29798192 - 29798265
Alignment:
Q  282 tgttgtatgcaattgtgagttatatgtcccacatcagataaaaaagtggaggttgaacattttataagtgagag 355  Q
    |||||||||||| |||||||||||||||| ||||  ||||||| |||  ||||||||||  |||||||| ||||    
T  29798192 tgttgtatgcaagtgtgagttatatgtcctacattggataaaatagtaaaggttgaacaccttataagtaagag 29798265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 282 - 355
Target Start/End: Original strand, 34364500 - 34364573
Alignment:
Q  282 tgttgtatgcaattgtgagttatatgtcccacatcagataaaaaagtggaggttgaacattttataagtgagag 355  Q
    |||||| ||||| ||||||||||||||| |||||| ||||||| |||  ||||||||||  |||||||| ||||    
T  34364500 tgttgtgtgcaagtgtgagttatatgtctcacatcggataaaatagtaaaggttgaacaccttataagtaagag 34364573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 289 - 350
Target Start/End: Original strand, 41142372 - 41142433
Alignment:
Q  289 tgcaattgtgagttatatgtcccacatcagataaaaaagtggaggttgaacattttataagt 350  Q
    ||||| |||||||||||||||||||||| ||||||| |||  ||||||||||  ||||||||    
T  41142372 tgcaagtgtgagttatatgtcccacatcggataaaacagtaaaggttgaacaccttataagt 41142433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 304 - 369
Target Start/End: Original strand, 44091909 - 44091974
Alignment:
Q  304 tatgtcccacatcagataaaaaagtggaggttgaacattttataagtgagagaacacatgaatcta 369  Q
    |||||| ||||||||||  ||||||  |||||||||| ||||||||||||||||| ||| ||||||    
T  44091909 tatgtcacacatcagatgtaaaagtaaaggttgaacactttataagtgagagaacccataaatcta 44091974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 282 - 354
Target Start/End: Complemental strand, 26662063 - 26661991
Alignment:
Q  282 tgttgtatgcaattgtgagttatatgtcccacatcagataaaaaagtggaggttgaacattttataagtgaga 354  Q
    |||||| | ||| |||||||||||| ||||| ||||||||||| |||  ||||||||||  ||||||||||||    
T  26662063 tgttgtgtacaagtgtgagttatatatcccatatcagataaaagagtaaaggttgaacaccttataagtgaga 26661991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 311 - 358
Target Start/End: Original strand, 10351182 - 10351229
Alignment:
Q  311 cacatcagataaaaaagtggaggttgaacattttataagtgagagaac 358  Q
    ||||||||||| |||| | ||||||||||| |||||||||||||||||    
T  10351182 cacatcagatagaaaaatagaggttgaacactttataagtgagagaac 10351229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 289 - 355
Target Start/End: Original strand, 45084382 - 45084448
Alignment:
Q  289 tgcaattgtgagttatatgtcccacatcagataaaaaagtggaggttgaacattttataagtgagag 355  Q
    ||||| |||||||||||| ||||||||| ||||||| |||  ||||||||||  |||||||| ||||    
T  45084382 tgcaagtgtgagttatatctcccacatcggataaaacagtaaaggttgaacaccttataagtaagag 45084448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 282 - 355
Target Start/End: Complemental strand, 66637 - 66564
Alignment:
Q  282 tgttgtatgcaattgtgagttatatgtcccacatcagataaaaaagtggaggttgaacattttataagtgagag 355  Q
    |||||| ||||| |||||||||||||| ||| ||| |||| ||||||  ||||||||||  |||||||| ||||    
T  66637 tgttgtgtgcaagtgtgagttatatgttccatatcggatagaaaagtaaaggttgaacaccttataagtaagag 66564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 282 - 355
Target Start/End: Original strand, 24448270 - 24448343
Alignment:
Q  282 tgttgtatgcaattgtgagttatatgtcccacatcagataaaaaagtggaggttgaacattttataagtgagag 355  Q
    |||||| ||||| ||| ||||||||||   |||||  | | ||||||||| |||||||||||||||||||||||    
T  24448270 tgttgtgtgcaagtgtaagttatatgttagacatctcaaagaaaagtggaagttgaacattttataagtgagag 24448343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 282 - 355
Target Start/End: Original strand, 34364918 - 34364991
Alignment:
Q  282 tgttgtatgcaattgtgagttatatgtcccacatcagataaaaaagtggaggttgaacattttataagtgagag 355  Q
    |||||| ||||| ||||||||||||||| |||||| ||||||| | |  ||||||||||  |||||||| ||||    
T  34364918 tgttgtgtgcaagtgtgagttatatgtcacacatcggataaaataataaaggttgaacaccttataagtaagag 34364991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 290 - 355
Target Start/End: Original strand, 40082408 - 40082473
Alignment:
Q  290 gcaattgtgagttatatgtcccacatcagataaaaaagtggaggttgaacattttataagtgagag 355  Q
    |||| |||||||||||||||| ||||| ||||||| |||  ||||||||||  |||||||| ||||    
T  40082408 gcaagtgtgagttatatgtcctacatcggataaaatagtaaaggttgaacaccttataagtaagag 40082473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 282 - 326
Target Start/End: Complemental strand, 22077287 - 22077243
Alignment:
Q  282 tgttgtatgcaattgtgagttatatgtcccacatcagataaaaaa 326  Q
    |||||| ||||| |||||||||||||||||||||| |||| ||||    
T  22077287 tgttgtgtgcaagtgtgagttatatgtcccacatcggatagaaaa 22077243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 295 - 363
Target Start/End: Complemental strand, 35530466 - 35530398
Alignment:
Q  295 tgtgagttatatgtcccacatcagataaaaaagtggaggttgaacattttataagtgagagaacacatg 363  Q
    |||| |||||||||||||| ||  |||||||| |  ||||||||||||||||| || |||| |||||||    
T  35530466 tgtgtgttatatgtcccacgtcgaataaaaaaattaaggttgaacattttatatgtaagaggacacatg 35530398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 295 - 355
Target Start/End: Original strand, 37555736 - 37555796
Alignment:
Q  295 tgtgagttatatgtcccacatcagataaaaaagtggaggttgaacattttataagtgagag 355  Q
    ||||||||||| |||||||||| ||||||| |||| |||||||| |  |||||||| ||||    
T  37555736 tgtgagttataagtcccacatcggataaaatagtgaaggttgaatacattataagtaagag 37555796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 322 - 354
Target Start/End: Complemental strand, 50081182 - 50081150
Alignment:
Q  322 aaaaagtggaggttgaacattttataagtgaga 354  Q
    |||||||||||| ||||||||||||||||||||    
T  50081182 aaaaagtggaggctgaacattttataagtgaga 50081150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 55; Significance: 2e-22; HSPs: 32)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 282 - 356
Target Start/End: Complemental strand, 4154445 - 4154371
Alignment:
Q  282 tgttgtatgcaattgtgagttatatgtcccacatcagataaaaaagtggaggttgaacattttataagtgagaga 356  Q
    |||||| ||||| |||||||||||||||| |||||||||| |||||||||||||||||| |||||||||||||||    
T  4154445 tgttgtgtgcaaatgtgagttatatgtcctacatcagatagaaaagtggaggttgaacactttataagtgagaga 4154371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 279 - 346
Target Start/End: Complemental strand, 20995569 - 20995502
Alignment:
Q  279 tcatgttgtatgcaattgtgagttatatgtcccacatcagataaaaaagtggaggttgaacattttat 346  Q
    ||||||||| ||||| ||||||||||||||| |||||||||||||||||||||||||||||| |||||    
T  20995569 tcatgttgtgtgcaagtgtgagttatatgtctcacatcagataaaaaagtggaggttgaacactttat 20995502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 282 - 352
Target Start/End: Complemental strand, 4154831 - 4154761
Alignment:
Q  282 tgttgtatgcaattgtgagttatatgtcccacatcagataaaaaagtggaggttgaacattttataagtga 352  Q
    |||||| ||||| |||||||||||||||||||||| |||| |||||||||||||||||| |||||||||||    
T  4154831 tgttgtgtgcaagtgtgagttatatgtcccacatctgatagaaaagtggaggttgaacactttataagtga 4154761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 280 - 355
Target Start/End: Complemental strand, 9620843 - 9620768
Alignment:
Q  280 catgttgtatgcaattgtgagttatatgtcccacatcagataaaaaagtggaggttgaacattttataagtgagag 355  Q
    |||||||| ||||| ||||||||||||||| |||| |||||| |||||| || ||||| || ||||||||||||||    
T  9620843 catgttgtgtgcaagtgtgagttatatgtctcacaacagatagaaaagtagaagttgatcactttataagtgagag 9620768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 281 - 352
Target Start/End: Original strand, 41972150 - 41972221
Alignment:
Q  281 atgttgtatgcaattgtgagttatatgtcccacatcagataaaaaagtggaggttgaacattttataagtga 352  Q
    ||||||| ||||| |||||||||||||||||||||| |||| ||||||  ||||||||||  ||||||||||    
T  41972150 atgttgtgtgcaagtgtgagttatatgtcccacatcggatagaaaagtaaaggttgaacaccttataagtga 41972221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 289 - 355
Target Start/End: Original strand, 3669687 - 3669753
Alignment:
Q  289 tgcaattgtgagttatatgtcccacatcagataaaaaagtggaggttgaacattttataagtgagag 355  Q
    ||||| |||||||||||||||||||||||||||||| |||  ||||||||||  |||||||| ||||    
T  3669687 tgcaagtgtgagttatatgtcccacatcagataaaatagtaaaggttgaacaccttataagtaagag 3669753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 282 - 350
Target Start/End: Complemental strand, 3038455 - 3038387
Alignment:
Q  282 tgttgtatgcaattgtgagttatatgtcccacatcagataaaaaagtggaggttgaacattttataagt 350  Q
    |||||| | ||| |||||||||||||||||||||| ||||||| |||  |||||||||| |||||||||    
T  3038455 tgttgtgtacaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacactttataagt 3038387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 282 - 373
Target Start/End: Complemental strand, 8918929 - 8918838
Alignment:
Q  282 tgttgtatgcaattgtgagttatatgtcccacatcagataaaaaagtggaggttgaacattttataagtgagagaacacatgaatctattga 373  Q
    |||||| ||||| ||||||||| |||||||||||||||||  | |||  |||||||||| ||||||||| |||| || ||| || |||||||    
T  8918929 tgttgtgtgcaagtgtgagttacatgtcccacatcagatagcagagtaaaggttgaacactttataagtaagaggacccataaacctattga 8918838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 282 - 328
Target Start/End: Original strand, 147822 - 147868
Alignment:
Q  282 tgttgtatgcaattgtgagttatatgtcccacatcagataaaaaagt 328  Q
    |||||| ||||| |||||||||||||||||||||| |||||||||||    
T  147822 tgttgtgtgcaagtgtgagttatatgtcccacatctgataaaaaagt 147868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 289 - 355
Target Start/End: Complemental strand, 45122068 - 45122002
Alignment:
Q  289 tgcaattgtgagttatatgtcccacatcagataaaaaagtggaggttgaacattttataagtgagag 355  Q
    ||||| ||||||||||||||||||||||  |||||| |||  |||||||||| ||||||||| ||||    
T  45122068 tgcaagtgtgagttatatgtcccacatcgcataaaatagtaaaggttgaacactttataagtaagag 45122002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 284 - 358
Target Start/End: Complemental strand, 45122220 - 45122146
Alignment:
Q  284 ttgtatgcaattgtgagttatatgtcccacatcagataaaaaagtggaggttgaacattttataagtgagagaac 358  Q
    |||| ||||| ||||||||||||||| |||||| ||||||| |||  ||||||||||  |||||||| |||||||    
T  45122220 ttgtgtgcaagtgtgagttatatgtctcacatcggataaaatagtaaaggttgaacaccttataagtaagagaac 45122146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 282 - 355
Target Start/End: Original strand, 5420644 - 5420717
Alignment:
Q  282 tgttgtatgcaattgtgagttatatgtcccacatcagataaaaaagtggaggttgaacattttataagtgagag 355  Q
    |||||||||||| ||||  |||||||||||||||| |||| || |||  ||||||||||| |||||||| ||||    
T  5420644 tgttgtatgcaagtgtgtattatatgtcccacatcggatagaatagtaaaggttgaacatcttataagtaagag 5420717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 282 - 355
Target Start/End: Original strand, 9309348 - 9309421
Alignment:
Q  282 tgttgtatgcaattgtgagttatatgtcccacatcagataaaaaagtggaggttgaacattttataagtgagag 355  Q
    |||||| ||||| |||||||||||||||||||||| ||||||| |||  | ||||||||  |||||||| ||||    
T  9309348 tgttgtgtgcaagtgtgagttatatgtcccacatcggataaaagagtaaatgttgaacaccttataagtaagag 9309421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 295 - 340
Target Start/End: Original strand, 40518588 - 40518633
Alignment:
Q  295 tgtgagttatatgtcccacatcagataaaaaagtggaggttgaaca 340  Q
    ||||||||||||||||||||||||||| ||||||  ||||||||||    
T  40518588 tgtgagttatatgtcccacatcagatagaaaagtaaaggttgaaca 40518633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 305 - 354
Target Start/End: Complemental strand, 44358212 - 44358163
Alignment:
Q  305 atgtcccacatcagataaaaaagtggaggttgaacattttataagtgaga 354  Q
    ||||| ||||||||||||||||||| | ||||| ||||||||||||||||    
T  44358212 atgtctcacatcagataaaaaagtgaatgttgaccattttataagtgaga 44358163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 282 - 355
Target Start/End: Original strand, 9308970 - 9309045
Alignment:
Q  282 tgttgtatgcaattgtgagttatatgtcc--cacatcagataaaaaagtggaggttgaacattttataagtgagag 355  Q
    |||||| ||||| ||||||||||||||||  |||||||||||||| |||  | ||||||||| |||||||| ||||    
T  9308970 tgttgtgtgcaagtgtgagttatatgtcctacacatcagataaaagagtaaaagttgaacatgttataagtaagag 9309045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 282 - 350
Target Start/End: Original strand, 9608738 - 9608806
Alignment:
Q  282 tgttgtatgcaattgtgagttatatgtcccacatcagataaaaaagtggaggttgaacattttataagt 350  Q
    |||||| ||||| |||||||||||||||||| ||| |||| ||||||  ||||||||||  ||||||||    
T  9608738 tgttgtgtgcaagtgtgagttatatgtcccatatcggatagaaaagtaaaggttgaacaccttataagt 9608806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 296 - 355
Target Start/End: Complemental strand, 70425 - 70366
Alignment:
Q  296 gtgagttatatgtcccacatcagataaaaaagtggaggttgaacattttataagtgagag 355  Q
    ||||||||||||||||||||| ||||||| |||  | ||||||||| |||||||| ||||    
T  70425 gtgagttatatgtcccacatcggataaaagagtaaatgttgaacatcttataagtaagag 70366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 282 - 340
Target Start/End: Complemental strand, 6877028 - 6876969
Alignment:
Q  282 tgttgtatgcaattgtgagttatat-gtcccacatcagataaaaaagtggaggttgaaca 340  Q
    |||||| ||||| |||||||||||| |||||||||| |||||||||||  ||||||||||    
T  6877028 tgttgtgtgcaagtgtgagttatatagtcccacatcggataaaaaagtaaaggttgaaca 6876969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 296 - 355
Target Start/End: Original strand, 34835216 - 34835275
Alignment:
Q  296 gtgagttatatgtcccacatcagataaaaaagtggaggttgaacattttataagtgagag 355  Q
    ||||||||||||||||||||| ||||||| |||  ||||||||||  |||||||| ||||    
T  34835216 gtgagttatatgtcccacatccgataaaatagtaaaggttgaacaccttataagtaagag 34835275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 296 - 355
Target Start/End: Complemental strand, 41416322 - 41416263
Alignment:
Q  296 gtgagttatatgtcccacatcagataaaaaagtggaggttgaacattttataagtgagag 355  Q
    ||||||||||||||||||||| ||||||| |||  ||||||||||  |||||||| ||||    
T  41416322 gtgagttatatgtcccacatcggataaaatagtaaaggttgaacaccttataagtaagag 41416263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 289 - 355
Target Start/End: Complemental strand, 1014403 - 1014337
Alignment:
Q  289 tgcaattgtgagttatatgtcccacatcagataaaaaagtggaggttgaacattttataagtgagag 355  Q
    ||||| |||||||||||||||  ||||||||||||| |||  ||||||||||  |||||||| ||||    
T  1014403 tgcaagtgtgagttatatgtcatacatcagataaaatagtaaaggttgaacaccttataagtaagag 1014337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 295 - 340
Target Start/End: Original strand, 147457 - 147502
Alignment:
Q  295 tgtgagttatatgtcccacatcagataaaaaagtggaggttgaaca 340  Q
    |||||||||||||||||||||| ||||||| |||  ||||||||||    
T  147457 tgtgagttatatgtcccacatcggataaaagagtaaaggttgaaca 147502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 289 - 350
Target Start/End: Original strand, 3670060 - 3670121
Alignment:
Q  289 tgcaattgtgagttatatgtcccacatcagataaaaaagtggaggttgaacattttataagt 350  Q
    ||||| |||||||||||||||||||||| ||||||| |||  ||||| ||||  ||||||||    
T  3670060 tgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggtttaacaccttataagt 3670121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 289 - 338
Target Start/End: Original strand, 6731904 - 6731953
Alignment:
Q  289 tgcaattgtgagttatatgtcccacatcagataaaaaagtggaggttgaa 338  Q
    ||||| |||||||||||||||||||||| ||||||| |||  ||||||||    
T  6731904 tgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaa 6731953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 283 - 328
Target Start/End: Original strand, 12283867 - 12283912
Alignment:
Q  283 gttgtatgcaattgtgagttatatgtcccacatcagataaaaaagt 328  Q
    ||||| ||||| ||| ||||||||||||||| ||||||||||||||    
T  12283867 gttgtgtgcaagtgtaagttatatgtcccacgtcagataaaaaagt 12283912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 302 - 355
Target Start/End: Complemental strand, 20870718 - 20870665
Alignment:
Q  302 tatatgtcccacatcagataaaaaagtggaggttgaacattttataagtgagag 355  Q
    ||||||| ||||||||||||||| |||  ||||||||||| |||||||| ||||    
T  20870718 tatatgttccacatcagataaaatagtaaaggttgaacatcttataagtaagag 20870665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 282 - 355
Target Start/End: Complemental strand, 25561981 - 25561908
Alignment:
Q  282 tgttgtatgcaattgtgagttatatgtcccacatcagataaaaaagtggaggttgaacattttataagtgagag 355  Q
    |||||| | ||| |||||||||||||||||||||| ||||||| |||  | ||||||||  |||||||| ||||    
T  25561981 tgttgtctacaagtgtgagttatatgtcccacatcggataaaagagtaaacgttgaacaccttataagtaagag 25561908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 282 - 355
Target Start/End: Original strand, 30359602 - 30359675
Alignment:
Q  282 tgttgtatgcaattgtgagttatatgtcccacatcagataaaaaagtggaggttgaacattttataagtgagag 355  Q
    |||||| | ||| ||||||||||||||| |||||||||||||| |||  | ||||||||  |||||||| ||||    
T  30359602 tgttgtgtacaagtgtgagttatatgtctcacatcagataaaagagtaaaagttgaacaccttataagtaagag 30359675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 295 - 372
Target Start/End: Complemental strand, 43274931 - 43274854
Alignment:
Q  295 tgtgagttatatgtcccacatcagataaaaaagtggaggttgaacattttataagtgagagaacacatgaatctattg 372  Q
    ||||||||||||||  |||||||||||||| |||  |||||||| || |||||||| |||| || ||| || ||||||    
T  43274931 tgtgagttatatgtttcacatcagataaaagagtaaaggttgaatatattataagtaagaggacccataaacctattg 43274854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 295 - 355
Target Start/End: Complemental strand, 18372851 - 18372791
Alignment:
Q  295 tgtgagttatatgtcccacatcagataaaaaagtggaggttgaacattttataagtgagag 355  Q
    ||||||||||||||| |||||| ||||||| |||  ||||||||||  |||||||| ||||    
T  18372851 tgtgagttatatgtcacacatcggataaaatagtaaaggttgaacaccttataagtaagag 18372791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 299 - 355
Target Start/End: Complemental strand, 25561792 - 25561736
Alignment:
Q  299 agttatatgtcccacatcagataaaaaagtggaggttgaacattttataagtgagag 355  Q
    |||||||||||||||||| ||||||| |||  ||||||||||  |||||||| ||||    
T  25561792 agttatatgtcccacatcggataaaagagtaaaggttgaacaccttataagtaagag 25561736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 54; Significance: 9e-22; HSPs: 35)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 282 - 355
Target Start/End: Complemental strand, 11348491 - 11348418
Alignment:
Q  282 tgttgtatgcaattgtgagttatatgtcccacatcagataaaaaagtggaggttgaacattttataagtgagag 355  Q
    |||||| |||||||||||||||||||| | ||||||||||||| ||||||||||||||| ||||||||||||||    
T  11348491 tgttgtgtgcaattgtgagttatatgttctacatcagataaaatagtggaggttgaacactttataagtgagag 11348418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 282 - 358
Target Start/End: Original strand, 28034222 - 28034298
Alignment:
Q  282 tgttgtatgcaattgtgagttatatgtcccacatcagataaaaaagtggaggttgaacattttataagtgagagaac 358  Q
    |||||| ||||| ||||| ||||||||||| |||| |||| |||||||||||||||||| |||||||||||||||||    
T  28034222 tgttgtgtgcaagtgtgaattatatgtcccgcatcggatagaaaagtggaggttgaacactttataagtgagagaac 28034298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 295 - 355
Target Start/End: Complemental strand, 15841134 - 15841074
Alignment:
Q  295 tgtgagttatatgtcccacatcagataaaaaagtggaggttgaacattttataagtgagag 355  Q
    ||||| |||||||||||| |||||||| ||||||||||| |||||||||||||||||||||    
T  15841134 tgtgaattatatgtcccatatcagatagaaaagtggaggctgaacattttataagtgagag 15841074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 282 - 348
Target Start/End: Complemental strand, 1731810 - 1731744
Alignment:
Q  282 tgttgtatgcaattgtgagttatatgtcccacatcagataaaaaagtggaggttgaacattttataa 348  Q
    |||||| ||||| |||||||||||||||||||||||||||||| |||  ||||||||||| ||||||    
T  1731810 tgttgtgtgcaaatgtgagttatatgtcccacatcagataaaacagtaaaggttgaacatcttataa 1731744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 283 - 355
Target Start/End: Original strand, 44620654 - 44620726
Alignment:
Q  283 gttgtatgcaattgtgagttatatgtcccacatcagataaaaaagtggaggttgaacattttataagtgagag 355  Q
    ||||| ||||| |||||||||||||||||||||| ||| ||| ||| ||||||||||| ||||||||| ||||    
T  44620654 gttgtgtgcaagtgtgagttatatgtcccacatcggatgaaatagtagaggttgaacactttataagtaagag 44620726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 289 - 355
Target Start/End: Complemental strand, 54017751 - 54017685
Alignment:
Q  289 tgcaattgtgagttatatgtcccacatcagataaaaaagtggaggttgaacattttataagtgagag 355  Q
    ||||| ||||||||||||||||||| |||||||||| |||  ||||||||||| |||||||| ||||    
T  54017751 tgcaagtgtgagttatatgtcccacgtcagataaaatagtaaaggttgaacatcttataagtaagag 54017685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 282 - 355
Target Start/End: Complemental strand, 3244614 - 3244541
Alignment:
Q  282 tgttgtatgcaattgtgagttatatgtcccacatcagataaaaaagtggaggttgaacattttataagtgagag 355  Q
    |||||| ||||| ||||||||||||||| |||||| |||| ||||||  ||||||||||| |||||||| ||||    
T  3244614 tgttgtgtgcaagtgtgagttatatgtctcacatcggatagaaaagtaaaggttgaacatcttataagtaagag 3244541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 282 - 355
Target Start/End: Original strand, 25483329 - 25483402
Alignment:
Q  282 tgttgtatgcaattgtgagttatatgtcccacatcagataaaaaagtggaggttgaacattttataagtgagag 355  Q
    |||||| ||||| ||||||||||||||| |||||| ||||||| |||  ||||||||||| |||||||| ||||    
T  25483329 tgttgtgtgcaagtgtgagttatatgtctcacatcggataaaatagtaaaggttgaacatcttataagtaagag 25483402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 295 - 348
Target Start/End: Original strand, 49302910 - 49302963
Alignment:
Q  295 tgtgagttatatgtcccacatcagataaaaaagtggaggttgaacattttataa 348  Q
    ||||||||||||||||||||||| ||||||||||  ||||||||||| ||||||    
T  49302910 tgtgagttatatgtcccacatcaaataaaaaagtaaaggttgaacatcttataa 49302963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 282 - 355
Target Start/End: Original strand, 52884880 - 52884953
Alignment:
Q  282 tgttgtatgcaattgtgagttatatgtcccacatcagataaaaaagtggaggttgaacattttataagtgagag 355  Q
    |||||| ||||| |||||||||||||||||||||| ||||||| |||  ||||||||||  |||||||| ||||    
T  52884880 tgttgtgtgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacaccttataagtaagag 52884953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 282 - 350
Target Start/End: Original strand, 52884688 - 52884756
Alignment:
Q  282 tgttgtatgcaattgtgagttatatgtcccacatcagataaaaaagtggaggttgaacattttataagt 350  Q
    |||||| ||||| |||||||||||||||||||||| ||||||| |||  ||||||||||  ||||||||    
T  52884688 tgttgtgtgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacaccttataagt 52884756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 281 - 355
Target Start/End: Original strand, 2740692 - 2740766
Alignment:
Q  281 atgttgtatgcaattgtgagttatatgtcccacatcagataaaaaagtggaggttgaacattttataagtgagag 355  Q
    ||||||| ||||| |||||||||||||||||||||| |||| || |||  ||||||||||  |||||||| ||||    
T  2740692 atgttgtgtgcaagtgtgagttatatgtcccacatcggatagaacagtaaaggttgaacaccttataagtaagag 2740766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 282 - 372
Target Start/End: Original strand, 50002419 - 50002509
Alignment:
Q  282 tgttgtatgcaattgtgagttatatgtcccacatcagataaaaaagtggaggttgaacattttataagtgagagaacacatgaatctattg 372  Q
    |||||| ||||| ||||||||||||||| |||||| ||||||| |||  |||||||||| ||| ||||| |||| || ||| |||| ||||    
T  50002419 tgttgtttgcaagtgtgagttatatgtctcacatcggataaaagagtaaaggttgaacactttttaagtaagaggacccataaatccattg 50002509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 282 - 355
Target Start/End: Original strand, 3341121 - 3341194
Alignment:
Q  282 tgttgtatgcaattgtgagttatatgtcccacatcagataaaaaagtggaggttgaacattttataagtgagag 355  Q
    |||||| ||||| |||||||||||||||||||||  ||||||| |||  ||||| |||| ||||||||| ||||    
T  3341121 tgttgtgtgcaagtgtgagttatatgtcccacattggataaaagagtaaaggttaaacactttataagtaagag 3341194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 282 - 355
Target Start/End: Complemental strand, 4390264 - 4390191
Alignment:
Q  282 tgttgtatgcaattgtgagttatatgtcccacatcagataaaaaagtggaggttgaacattttataagtgagag 355  Q
    |||||| ||||| ||||||||| || ||||||||||||||||| |||  ||||||||||  |||||||| ||||    
T  4390264 tgttgtgtgcaagtgtgagttacatatcccacatcagataaaagagtaaaggttgaacaccttataagtaagag 4390191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 282 - 355
Target Start/End: Original strand, 10245913 - 10245986
Alignment:
Q  282 tgttgtatgcaattgtgagttatatgtcccacatcagataaaaaagtggaggttgaacattttataagtgagag 355  Q
    |||||| ||||| ||||||||||||| |||||||| ||||||| |||  ||||||||||  |||||||| ||||    
T  10245913 tgttgtgtgcaagtgtgagttatatgccccacatcggataaaagagtaaaggttgaacaccttataagtaagag 10245986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 282 - 355
Target Start/End: Original strand, 39404391 - 39404464
Alignment:
Q  282 tgttgtatgcaattgtgagttatatgtcccacatcagataaaaaagtggaggttgaacattttataagtgagag 355  Q
    |||||| | ||| |||||||||||||||||||||||||||||| |||  |||| |||||  |||||||| ||||    
T  39404391 tgttgtgtacaagtgtgagttatatgtcccacatcagataaaagagtaaaggtggaacaccttataagtaagag 39404464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 282 - 358
Target Start/End: Original strand, 12197371 - 12197447
Alignment:
Q  282 tgttgtatgcaattgtgagttatatgtcccacatcagataaaaaagtggaggttgaacattttataagtgagagaac 358  Q
    |||||| ||||| ||||||||||| ||||||||||| ||| ||||||| ||||| || | |||||||| || |||||    
T  12197371 tgttgtgtgcaagtgtgagttataggtcccacatcaaatagaaaagtgaaggttcaatactttataagcgaaagaac 12197447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 303 - 355
Target Start/End: Complemental strand, 15841510 - 15841458
Alignment:
Q  303 atatgtcccacatcagataaaaaagtggaggttgaacattttataagtgagag 355  Q
    ||||||| ||||||| ||| |||||||||||||||||| ||| ||||||||||    
T  15841510 atatgtctcacatcaaatagaaaagtggaggttgaacactttgtaagtgagag 15841458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 290 - 358
Target Start/End: Complemental strand, 16888971 - 16888903
Alignment:
Q  290 gcaattgtgagttatatgtcccacatcagataaaaaagtggaggttgaacattttataagtgagagaac 358  Q
    |||| |||||||||||||||||||||| |||| ||||||  |||||||| |  |||||||| |||||||    
T  16888971 gcaagtgtgagttatatgtcccacatcggatagaaaagtaaaggttgaataccttataagtaagagaac 16888903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 282 - 350
Target Start/End: Complemental strand, 22183427 - 22183359
Alignment:
Q  282 tgttgtatgcaattgtgagttatatgtcccacatcagataaaaaagtggaggttgaacattttataagt 350  Q
    |||||| ||||| |||||||||||| ||||||||| ||||||| |||  | |||||||| |||||||||    
T  22183427 tgttgtgtgcaagtgtgagttatatatcccacatcggataaaagagtaaatgttgaacaatttataagt 22183359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 289 - 357
Target Start/End: Complemental strand, 23557022 - 23556954
Alignment:
Q  289 tgcaattgtgagttatatgtcccacatcagataaaaaagtggaggttgaacattttataagtgagagaa 357  Q
    ||||| ||||||||| ||||   ||||| |||| |||||||||||||||||||||||||| | ||||||    
T  23557022 tgcaagtgtgagttaaatgttttacatcggatagaaaagtggaggttgaacattttataaataagagaa 23556954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 295 - 358
Target Start/End: Original strand, 20826223 - 20826286
Alignment:
Q  295 tgtgagttatatgtcccacatcagataaaaaagtggaggttgaacattttataagtgagagaac 358  Q
    |||||||||||||||||||||| ||||||| |||  | ||||||||  |||||||| |||||||    
T  20826223 tgtgagttatatgtcccacatcggataaaatagtaaaagttgaacacgttataagtaagagaac 20826286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 282 - 349
Target Start/End: Complemental strand, 39793023 - 39792956
Alignment:
Q  282 tgttgtatgcaattgtgagttatatgtcccacatcagataaaaaagtggaggttgaacattttataag 349  Q
    |||||| | ||| ||||||||||||||||||||||||||| ||||||  | ||||||||  |||||||    
T  39793023 tgttgtgtacaagtgtgagttatatgtcccacatcagatagaaaagtaaatgttgaacaccttataag 39792956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 289 - 355
Target Start/End: Original strand, 2741071 - 2741137
Alignment:
Q  289 tgcaattgtgagttatatgtcccacatcagataaaaaagtggaggttgaacattttataagtgagag 355  Q
    ||||| ||||||||||||||||||||||||||| || |||  |||||||| |  |||||||| ||||    
T  2741071 tgcaagtgtgagttatatgtcccacatcagatagaatagtaaaggttgaataccttataagtaagag 2741137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 289 - 355
Target Start/End: Complemental strand, 6975612 - 6975546
Alignment:
Q  289 tgcaattgtgagttatatgtcccacatcagataaaaaagtggaggttgaacattttataagtgagag 355  Q
    ||||| ||||||||||||||| |||||| ||||||| |||  |||||||| || |||||||| ||||    
T  6975612 tgcaaatgtgagttatatgtctcacatccgataaaatagtaaaggttgaatatcttataagtaagag 6975546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 320 - 354
Target Start/End: Complemental strand, 39099879 - 39099845
Alignment:
Q  320 taaaaaagtggaggttgaacattttataagtgaga 354  Q
    ||||||||||||||||||||||||||||| |||||    
T  39099879 taaaaaagtggaggttgaacattttataactgaga 39099845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 282 - 340
Target Start/End: Complemental strand, 41707627 - 41707569
Alignment:
Q  282 tgttgtatgcaattgtgagttatatgtcccacatcagataaaaaagtggaggttgaaca 340  Q
    |||||| | ||| |||||||||||||||||||||| ||||||| |||  ||||||||||    
T  41707627 tgttgtgtacaagtgtgagttatatgtcccacatcggataaaagagtaaaggttgaaca 41707569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 282 - 355
Target Start/End: Complemental strand, 4955480 - 4955407
Alignment:
Q  282 tgttgtatgcaattgtgagttatatgtcccacatcagataaaaaagtggaggttgaacattttataagtgagag 355  Q
    |||||| ||||| ||||||||||||||| || ||| ||||||| |||  ||||||||||  |||||||| ||||    
T  4955480 tgttgtgtgcaagtgtgagttatatgtctcatatcggataaaatagttaaggttgaacaccttataagtaagag 4955407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 282 - 362
Target Start/End: Original strand, 43174499 - 43174580
Alignment:
Q  282 tgttgtatgcaattgtgagttatatgtcccacatcagataaaaa-agtggaggttgaacattttataagtgagagaacacat 362  Q
    |||||| | ||| ||||||||||||| | ||||||||||||||| |||  ||||||||||  |||||||| |||| ||||||    
T  43174499 tgttgtgtacaagtgtgagttatatgccacacatcagataaaaagagtaaaggttgaacaccttataagtaagaggacacat 43174580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 282 - 355
Target Start/End: Complemental strand, 49076611 - 49076538
Alignment:
Q  282 tgttgtatgcaattgtgagttatatgtcccacatcagataaaaaagtggaggttgaacattttataagtgagag 355  Q
    |||||| ||||| |||||||||||||| ||| ||| ||||||| |||  ||||||||||  |||||||| ||||    
T  49076611 tgttgtgtgcaagtgtgagttatatgtaccatatcggataaaacagtaaaggttgaacaccttataagtaagag 49076538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 295 - 355
Target Start/End: Original strand, 760195 - 760255
Alignment:
Q  295 tgtgagttatatgtcccacatcagataaaaaagtggaggttgaacattttataagtgagag 355  Q
    ||||||||||||||||||||||  ||| |||| || |||||||  | ||||||||||||||    
T  760195 tgtgagttatatgtcccacatcgaatagaaaaatgaaggttgagaactttataagtgagag 760255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 282 - 350
Target Start/End: Original strand, 3700358 - 3700426
Alignment:
Q  282 tgttgtatgcaattgtgagttatatgtcccacatcagataaaaaagtggaggttgaacattttataagt 350  Q
    |||||| ||||| |||||||||||||||| ||||| ||||||| |||  | ||||||||  ||||||||    
T  3700358 tgttgtgtgcaagtgtgagttatatgtcctacatcggataaaagagtaaatgttgaacaccttataagt 3700426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 295 - 355
Target Start/End: Original strand, 50459727 - 50459787
Alignment:
Q  295 tgtgagttatatgtcccacatcagataaaaaagtggaggttgaacattttataagtgagag 355  Q
    |||||||||||||| ||||||| | ||||| |||  ||||||||||| |||||||| ||||    
T  50459727 tgtgagttatatgttccacatcggttaaaagagtaaaggttgaacatcttataagtaagag 50459787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 299 - 355
Target Start/End: Complemental strand, 54343147 - 54343091
Alignment:
Q  299 agttatatgtcccacatcagataaaaaagtggaggttgaacattttataagtgagag 355  Q
    |||||||||||||||||| ||||||| |||  ||||||||||  |||||||| ||||    
T  54343147 agttatatgtcccacatcggataaaatagtaaaggttgaacaccttataagtaagag 54343091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 51; Significance: 5e-20; HSPs: 37)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 281 - 355
Target Start/End: Complemental strand, 33561617 - 33561543
Alignment:
Q  281 atgttgtatgcaattgtgagttatatgtcccacatcagataaaaaagtggaggttgaacattttataagtgagag 355  Q
    ||||||| ||||| |||||||||||||| |||||||||||| ||||||||||||| |||| ||||||||||||||    
T  33561617 atgttgtgtgcaagtgtgagttatatgttccacatcagatagaaaagtggaggttaaacactttataagtgagag 33561543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 282 - 355
Target Start/End: Complemental strand, 33953936 - 33953863
Alignment:
Q  282 tgttgtatgcaattgtgagttatatgtcccacatcagataaaaaagtggaggttgaacattttataagtgagag 355  Q
    |||||| ||||| ||||||||||| ||||||||||||||| |||||||||||||||||| | ||||||||||||    
T  33953936 tgttgtgtgcaaatgtgagttataagtcccacatcagatagaaaagtggaggttgaacactatataagtgagag 33953863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 281 - 355
Target Start/End: Original strand, 962590 - 962664
Alignment:
Q  281 atgttgtatgcaattgtgagttatatgtcccacatcagataaaaaagtggaggttgaacattttataagtgagag 355  Q
    ||||||||||||| |||||||||||||||||||||| |||| ||||||  ||||||||||  |||||||||||||    
T  962590 atgttgtatgcaagtgtgagttatatgtcccacatcggatagaaaagtaaaggttgaacaccttataagtgagag 962664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 282 - 351
Target Start/End: Complemental strand, 29873702 - 29873633
Alignment:
Q  282 tgttgtatgcaattgtgagttatatgtcccacatcagataaaaaagtggaggttgaacattttataagtg 351  Q
    |||||| |||||  ||| |||| ||||||||||||||||| |||||||||||||||||||||||||||||    
T  29873702 tgttgtgtgcaagggtgtgttacatgtcccacatcagatagaaaagtggaggttgaacattttataagtg 29873633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 289 - 355
Target Start/End: Original strand, 7598609 - 7598675
Alignment:
Q  289 tgcaattgtgagttatatgtcccacatcagataaaaaagtggaggttgaacattttataagtgagag 355  Q
    ||||| ||||||||||||||||||||||||||||||||||  ||||||||||  |||||||| ||||    
T  7598609 tgcaagtgtgagttatatgtcccacatcagataaaaaagtaaaggttgaacaccttataagtaagag 7598675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 282 - 348
Target Start/End: Complemental strand, 33954426 - 33954360
Alignment:
Q  282 tgttgtatgcaattgtgagttatatgtcccacatcagataaaaaagtggaggttgaacattttataa 348  Q
    |||||| ||||| ||||||||||||||||||||||||||| |||||| |||||| |||||| |||||    
T  33954426 tgttgtgtgcaagtgtgagttatatgtcccacatcagatagaaaagttgaggttaaacattatataa 33954360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 295 - 348
Target Start/End: Complemental strand, 29874175 - 29874122
Alignment:
Q  295 tgtgagttatatgtcccacatcagataaaaaagtggaggttgaacattttataa 348  Q
    |||| |||||||||||||||||||||| |||||||||||||||||| |||||||    
T  29874175 tgtgtgttatatgtcccacatcagatagaaaagtggaggttgaacactttataa 29874122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 282 - 355
Target Start/End: Original strand, 30323457 - 30323530
Alignment:
Q  282 tgttgtatgcaattgtgagttatatgtcccacatcagataaaaaagtggaggttgaacattttataagtgagag 355  Q
    |||||| ||||| |||| ||||||||||||| |||||||| |||| ||||||||||||| |||| |||||||||    
T  30323457 tgttgtgtgcaagtgtgtgttatatgtcccaaatcagatagaaaattggaggttgaacactttagaagtgagag 30323530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 282 - 355
Target Start/End: Original strand, 42514642 - 42514715
Alignment:
Q  282 tgttgtatgcaattgtgagttatatgtcccacatcagataaaaaagtggaggttgaacattttataagtgagag 355  Q
    |||||||||||| |||||||||||||||| |||||||||| ||||||  ||||||||||  |||||||| ||||    
T  42514642 tgttgtatgcaagtgtgagttatatgtcctacatcagatagaaaagtaaaggttgaacaccttataagtaagag 42514715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 295 - 355
Target Start/End: Original strand, 40733523 - 40733583
Alignment:
Q  295 tgtgagttatatgtcccacatcagataaaaaagtggaggttgaacattttataagtgagag 355  Q
    ||||||||||||||||||||||||||||||||||  | ||||||||  |||||||| ||||    
T  40733523 tgtgagttatatgtcccacatcagataaaaaagtaaatgttgaacaccttataagtaagag 40733583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 282 - 355
Target Start/End: Complemental strand, 41678534 - 41678459
Alignment:
Q  282 tgttgtatgcaattgtgagttatat--gtcccacatcagataaaaaagtggaggttgaacattttataagtgagag 355  Q
    |||||| ||||| ||||||||||||  ||| ||||||||||| ||||| ||||||| |||| ||||||||||||||    
T  41678534 tgttgtgtgcaagtgtgagttatatatgtctcacatcagatagaaaaggggaggttaaacactttataagtgagag 41678459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 282 - 349
Target Start/End: Complemental strand, 31468911 - 31468844
Alignment:
Q  282 tgttgtatgcaattgtgagttatatgtcccacatcagataaaaaagtggaggttgaacattttataag 349  Q
    |||||| ||||| |||||||||||||||||||||| ||||||| |||  |||||||| || |||||||    
T  31468911 tgttgtgtgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaatatcttataag 31468844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 289 - 355
Target Start/End: Complemental strand, 5543156 - 5543090
Alignment:
Q  289 tgcaattgtgagttatatgtcccacatcagataaaaaagtggaggttgaacattttataagtgagag 355  Q
    ||||| |||||||||||||||||||||| ||||||| |||  ||||||||||  |||||||| ||||    
T  5543156 tgcaagtgtgagttatatgtcccacatccgataaaatagtaaaggttgaacaccttataagtaagag 5543090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 289 - 355
Target Start/End: Complemental strand, 36178763 - 36178697
Alignment:
Q  289 tgcaattgtgagttatatgtcccacatcagataaaaaagtggaggttgaacattttataagtgagag 355  Q
    ||||| |||||||||||||||||||||| ||||||| |||  ||||||||||  |||||||| ||||    
T  36178763 tgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacaccttataagtaagag 36178697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 282 - 340
Target Start/End: Complemental strand, 36785728 - 36785670
Alignment:
Q  282 tgttgtatgcaattgtgagttatatgtcccacatcagataaaaaagtggaggttgaaca 340  Q
    |||||| ||||| |||||||||||||||||||||| ||||||| |||  ||||||||||    
T  36785728 tgttgtgtgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaaca 36785670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 289 - 355
Target Start/End: Original strand, 37106188 - 37106254
Alignment:
Q  289 tgcaattgtgagttatatgtcccacatcagataaaaaagtggaggttgaacattttataagtgagag 355  Q
    ||||| |||||||||||||||||||||| ||||||| |||  ||||||||||  |||||||| ||||    
T  37106188 tgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacaccttataagtaagag 37106254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 281 - 326
Target Start/End: Original strand, 16590880 - 16590925
Alignment:
Q  281 atgttgtatgcaattgtgagttatatgtcccacatcagataaaaaa 326  Q
    ||||||| ||||| ||||||||||||||||||||||| ||||||||    
T  16590880 atgttgtgtgcaagtgtgagttatatgtcccacatcaaataaaaaa 16590925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 282 - 355
Target Start/End: Complemental strand, 28254402 - 28254329
Alignment:
Q  282 tgttgtatgcaattgtgagttatatgtcccacatcagataaaaaagtggaggttgaacattttataagtgagag 355  Q
    |||||| ||| | ||||| |||||||||||||||| |||| ||||||  ||||||||||| |||||||| ||||    
T  28254402 tgttgtgtgccagtgtgacttatatgtcccacatcggatagaaaagtaaaggttgaacatcttataagtaagag 28254329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 282 - 355
Target Start/End: Complemental strand, 28531479 - 28531406
Alignment:
Q  282 tgttgtatgcaattgtgagttatatgtcccacatcagataaaaaagtggaggttgaacattttataagtgagag 355  Q
    |||||| ||||| |||||||||||||||||||||| |||| |||||   ||||||||||  |||||||| ||||    
T  28531479 tgttgtgtgcaagtgtgagttatatgtcccacatcggatagaaaagcaaaggttgaacaccttataagtaagag 28531406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 282 - 355
Target Start/End: Original strand, 30313171 - 30313243
Alignment:
Q  282 tgttgtatgcaattgtgagttatatgtcccacatcagataaaaaagtggaggttgaacattttataagtgagag 355  Q
    |||||| |||||  ||| |||||||||| |||||| |||| ||||||||||||||||||  |||||||||||||    
T  30313171 tgttgtgtgcaagcgtgtgttatatgtctcacatcggatagaaaagtggaggttgaaca-cttataagtgagag 30313243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 282 - 355
Target Start/End: Complemental strand, 37632762 - 37632689
Alignment:
Q  282 tgttgtatgcaattgtgagttatatgtcccacatcagataaaaaagtggaggttgaacattttataagtgagag 355  Q
    |||||| ||||| |||||||||||||||| ||||| ||||||| |||  |||||  ||||||||||||| ||||    
T  37632762 tgttgtgtgcaagtgtgagttatatgtcctacatcggataaaatagtaaaggtttgacattttataagtaagag 37632689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 282 - 355
Target Start/End: Complemental strand, 38796383 - 38796310
Alignment:
Q  282 tgttgtatgcaattgtgagttatatgtcccacatcagataaaaaagtggaggttgaacattttataagtgagag 355  Q
    |||||| ||||| |||||||||||||||||||||| ||||||| |||  | ||||||||  |||||||| ||||    
T  38796383 tgttgtgtgcaagtgtgagttatatgtcccacatcggataaaacagtaaatgttgaacaccttataagtaagag 38796310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 282 - 355
Target Start/End: Complemental strand, 38796785 - 38796712
Alignment:
Q  282 tgttgtatgcaattgtgagttatatgtcccacatcagataaaaaagtggaggttgaacattttataagtgagag 355  Q
    |||||| ||||| |||||||||||||||||||||| ||||||| | |  ||||||||||  |||||||| ||||    
T  38796785 tgttgtgtgcaagtgtgagttatatgtcccacatctgataaaacaataaaggttgaacaccttataagtaagag 38796712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 295 - 355
Target Start/End: Original strand, 6421391 - 6421451
Alignment:
Q  295 tgtgagttatatgtcccacatcagataaaaaagtggaggttgaacattttataagtgagag 355  Q
    |||||||||||||||||||||| ||||||| |||  ||||||||||  |||||||| ||||    
T  6421391 tgtgagttatatgtcccacatcggataaaagagtaaaggttgaacaccttataagtaagag 6421451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 282 - 358
Target Start/End: Complemental strand, 40679794 - 40679718
Alignment:
Q  282 tgttgtatgcaattgtgagttatatgtcccacatcagataaaaaagtggaggttgaacattttataagtgagagaac 358  Q
    |||||| ||||| |||||||||||||||||| ||| |||| ||||||   |||||||||  |||||||| |||||||    
T  40679794 tgttgtgtgcaaatgtgagttatatgtcccatatcggatagaaaagtaagggttgaacaccttataagtaagagaac 40679718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 284 - 355
Target Start/End: Complemental strand, 35580886 - 35580815
Alignment:
Q  284 ttgtatgcaattgtgagttatatgtcccacatcagataaaaaagtggaggttgaacattttataagtgagag 355  Q
    |||| ||||| |||||||||||||||||||||| ||||||| | |  | ||||||||  |||||||||||||    
T  35580886 ttgtgtgcaagtgtgagttatatgtcccacatcggataaaacaataaatgttgaacaccttataagtgagag 35580815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 282 - 372
Target Start/End: Original strand, 6712969 - 6713059
Alignment:
Q  282 tgttgtatgcaattgtgagttatatgtcccacatcagataaaaaagtggaggttgaacattttataagtgagagaacacatgaatctattg 372  Q
    |||||||| ||| ||||||||||||||| |||||| ||||||| |||  | ||||||||  |||||||| |||| || ||| || ||||||    
T  6712969 tgttgtatacaagtgtgagttatatgtctcacatcggataaaacagtaaatgttgaacaccttataagtaagaggacccataaacctattg 6713059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 282 - 324
Target Start/End: Complemental strand, 12529193 - 12529151
Alignment:
Q  282 tgttgtatgcaattgtgagttatatgtcccacatcagataaaa 324  Q
    |||||||||||| |||||||||||||||| |||||| ||||||    
T  12529193 tgttgtatgcaagtgtgagttatatgtcctacatcaaataaaa 12529151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 289 - 355
Target Start/End: Complemental strand, 14745825 - 14745759
Alignment:
Q  289 tgcaattgtgagttatatgtcccacatcagataaaaaagtggaggttgaacattttataagtgagag 355  Q
    ||||| |||||||||||||||||||||  ||||||| |||  ||||||||||  |||||||| ||||    
T  14745825 tgcaagtgtgagttatatgtcccacattggataaaatagtaaaggttgaacaccttataagtaagag 14745759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 282 - 340
Target Start/End: Original strand, 16542442 - 16542500
Alignment:
Q  282 tgttgtatgcaattgtgagttatatgtcccacatcagataaaaaagtggaggttgaaca 340  Q
    |||||| ||||| ||||||||||| |||||||||| ||||||| |||  ||||||||||    
T  16542442 tgttgtgtgcaagtgtgagttataagtcccacatcggataaaatagtaaaggttgaaca 16542500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 289 - 355
Target Start/End: Complemental strand, 41283633 - 41283567
Alignment:
Q  289 tgcaattgtgagttatatgtcccacatcagataaaaaagtggaggttgaacattttataagtgagag 355  Q
    ||||| |||||||||||||||||| ||| ||||||| |||  ||||||||||  |||||||| ||||    
T  41283633 tgcaagtgtgagttatatgtcccatatcggataaaatagtaaaggttgaacaccttataagtaagag 41283567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 282 - 355
Target Start/End: Original strand, 15880256 - 15880329
Alignment:
Q  282 tgttgtatgcaattgtgagttatatgtcccacatcagataaaaaagtggaggttgaacattttataagtgagag 355  Q
    |||||| | ||| |||||||||||||| ||||||| ||||||| |||  ||||||||||  |||||||| ||||    
T  15880256 tgttgtgtacaagtgtgagttatatgttccacatcggataaaagagtaaaggttgaacaccttataagtaagag 15880329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 282 - 355
Target Start/End: Original strand, 29676896 - 29676969
Alignment:
Q  282 tgttgtatgcaattgtgagttatatgtcccacatcagataaaaaagtggaggttgaacattttataagtgagag 355  Q
    |||||| ||||  |||||||||||||||||||||| ||||||| |||  ||||| ||||  ||||| |||||||    
T  29676896 tgttgtgtgcaggtgtgagttatatgtcccacatcggataaaagagtaaaggtttaacaccttataggtgagag 29676969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 289 - 350
Target Start/End: Original strand, 37105924 - 37105985
Alignment:
Q  289 tgcaattgtgagttatatgtcccacatcagataaaaaagtggaggttgaacattttataagt 350  Q
    ||||| ||||||||||||||||||||||  |||||| |||  ||||||||||  ||||||||    
T  37105924 tgcaagtgtgagttatatgtcccacatcgaataaaatagtaaaggttgaacaccttataagt 37105985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 323 - 355
Target Start/End: Original strand, 2336658 - 2336690
Alignment:
Q  323 aaaagtggaggttgaacattttataagtgagag 355  Q
    |||||||||||||||||| ||||||||||||||    
T  2336658 aaaagtggaggttgaacactttataagtgagag 2336690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 297 - 357
Target Start/End: Original strand, 34481274 - 34481334
Alignment:
Q  297 tgagttatatgtcccacatcagataaaaaagtggaggttgaacattttataagtgagagaa 357  Q
    |||||||||| || ||| || |||| |||||||||||||||| ||||||||| ||| ||||    
T  34481274 tgagttatatttctcacgtcggatataaaagtggaggttgaatattttataaatgatagaa 34481334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 282 - 326
Target Start/End: Complemental strand, 43443147 - 43443103
Alignment:
Q  282 tgttgtatgcaattgtgagttatatgtcccacatcagataaaaaa 326  Q
    |||||| ||||| ||| ||||||||||||||||||||||| ||||    
T  43443147 tgttgtgtgcaagtgtaagttatatgtcccacatcagatagaaaa 43443103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 47; Significance: 1e-17; HSPs: 27)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 282 - 372
Target Start/End: Complemental strand, 12662817 - 12662727
Alignment:
Q  282 tgttgtatgcaattgtgagttatatgtcccacatcagataaaaaagtggaggttgaacattttataagtgagagaacacatgaatctattg 372  Q
    |||||| ||||| |||||||||||||||||||||| ||||||| |||  |||||||||||||||||||| ||| ||| ||| |||| ||||    
T  12662817 tgttgtgtgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacattttataagtaagaaaacccataaatccattg 12662727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 282 - 355
Target Start/End: Original strand, 31509616 - 31509689
Alignment:
Q  282 tgttgtatgcaattgtgagttatatgtcccacatcagataaaaaagtggaggttgaacattttataagtgagag 355  Q
    |||||| ||||| ||||||||||||||| |||||| |||| ||||||||||||||| || ||||||||||||||    
T  31509616 tgttgtgtgcaagtgtgagttatatgtctcacatcggatagaaaagtggaggttgagcactttataagtgagag 31509689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 282 - 355
Target Start/End: Complemental strand, 36522402 - 36522329
Alignment:
Q  282 tgttgtatgcaattgtgagttatatgtcccacatcagataaaaaagtggaggttgaacattttataagtgagag 355  Q
    ||||||||| || ||||||||||||||| |||||  |||| |||| |||| |||||||||||||||||||||||    
T  36522402 tgttgtatgaaagtgtgagttatatgtctcacattggatagaaaaatggaagttgaacattttataagtgagag 36522329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 292 - 355
Target Start/End: Original strand, 41170637 - 41170700
Alignment:
Q  292 aattgtgagttatatgtcccacatcagataaaaaagtggaggttgaacattttataagtgagag 355  Q
    ||||||||||||||||||||||||| ||||||| |||  ||||||||||| |||||||| ||||    
T  41170637 aattgtgagttatatgtcccacatcggataaaatagtaaaggttgaacatcttataagtaagag 41170700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 290 - 340
Target Start/End: Complemental strand, 36522053 - 36522003
Alignment:
Q  290 gcaattgtgagttatatgtcccacatcagataaaaaagtggaggttgaaca 340  Q
    |||| ||||||||||||||||||||||||||| |||||| |||||||||||    
T  36522053 gcaagtgtgagttatatgtcccacatcagatagaaaagttgaggttgaaca 36522003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 282 - 355
Target Start/End: Original strand, 15370092 - 15370165
Alignment:
Q  282 tgttgtatgcaattgtgagttatatgtcccacatcagataaaaaagtggaggttgaacattttataagtgagag 355  Q
    |||||| ||||| ||||||||||||||||||||||  |||||| |||  ||||||||||| |||||||| ||||    
T  15370092 tgttgtgtgcaagtgtgagttatatgtcccacatcgaataaaatagtaaaggttgaacatcttataagtaagag 15370165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 282 - 355
Target Start/End: Complemental strand, 36492382 - 36492309
Alignment:
Q  282 tgttgtatgcaattgtgagttatatgtcccacatcagataaaaaagtggaggttgaacattttataagtgagag 355  Q
    |||||| ||||| |||||||||||||||||||||| ||||||| |||  ||||||||||  |||||||| ||||    
T  36492382 tgttgtttgcaagtgtgagttatatgtcccacatcggataaaagagtaaaggttgaacaccttataagtaagag 36492309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 295 - 355
Target Start/End: Complemental strand, 18603272 - 18603212
Alignment:
Q  295 tgtgagttatatgtcccacatcagataaaaaagtggaggttgaacattttataagtgagag 355  Q
    |||||||||||||||||||||||||||||| |||  ||||||||||  |||||||| ||||    
T  18603272 tgtgagttatatgtcccacatcagataaaatagtaaaggttgaacaccttataagtaagag 18603212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 284 - 356
Target Start/End: Original strand, 35150002 - 35150074
Alignment:
Q  284 ttgtatgcaattgtgagttatatgtcccacatcagataaaaaagtggaggttgaacattttataagtgagaga 356  Q
    |||| ||||| |||||||||||||||||||||| ||||||| |||  ||||||||||  |||||||| |||||    
T  35150002 ttgtgtgcaagtgtgagttatatgtcccacatcggataaaagagtcaaggttgaacaccttataagtaagaga 35150074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 282 - 354
Target Start/End: Complemental strand, 36568732 - 36568660
Alignment:
Q  282 tgttgtatgcaattgtgagttatatgtcccacatcagataaaaaagtggaggttgaacattttataagtgaga 354  Q
    |||||| ||||| |||||||||||||||||||||| |||| ||||||  | ||||||||  ||||||||||||    
T  36568732 tgttgtgtgcaagtgtgagttatatgtcccacatcggatagaaaagtaaaagttgaacaccttataagtgaga 36568660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 282 - 340
Target Start/End: Complemental strand, 26074311 - 26074253
Alignment:
Q  282 tgttgtatgcaattgtgagttatatgtcccacatcagataaaaaagtggaggttgaaca 340  Q
    |||||| ||||| ||||||||||||||| |||||| |||||||||||  ||||||||||    
T  26074311 tgttgtgtgcaagtgtgagttatatgtcacacatcggataaaaaagtaaaggttgaaca 26074253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 282 - 355
Target Start/End: Complemental strand, 1028682 - 1028609
Alignment:
Q  282 tgttgtatgcaattgtgagttatatgtcccacatcagataaaaaagtggaggttgaacattttataagtgagag 355  Q
    |||||| | ||| |||||||||||||||||||||| |||| ||||||  ||| |||||| ||||||||| ||||    
T  1028682 tgttgtgtacaagtgtgagttatatgtcccacatcggatagaaaagtaaaggatgaacactttataagtaagag 1028609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 282 - 355
Target Start/End: Complemental strand, 13415925 - 13415852
Alignment:
Q  282 tgttgtatgcaattgtgagttatatgtcccacatcagataaaaaagtggaggttgaacattttataagtgagag 355  Q
    |||||| ||||| |||||||||||||||||||||| ||||||  |||  ||||||||||  |||||||| ||||    
T  13415925 tgttgtgtgcaagtgtgagttatatgtcccacatcggataaattagtaaaggttgaacaccttataagtaagag 13415852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 297 - 350
Target Start/End: Original strand, 35914857 - 35914910
Alignment:
Q  297 tgagttatatgtcccacatcagataaaaaagtggaggttgaacattttataagt 350  Q
    ||||||||||||| |||||| ||||||| |||  ||||||||||||||||||||    
T  35914857 tgagttatatgtcacacatcggataaaagagtaaaggttgaacattttataagt 35914910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 282 - 331
Target Start/End: Complemental strand, 36527248 - 36527199
Alignment:
Q  282 tgttgtatgcaattgtgagttatatgtcccacatcagataaaaaagtgga 331  Q
    |||||| | ||| ||||||||||||||||||||||||||| |||||||||    
T  36527248 tgttgtgtacaagtgtgagttatatgtcccacatcagatagaaaagtgga 36527199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 290 - 350
Target Start/End: Original strand, 299490 - 299550
Alignment:
Q  290 gcaattgtgagttatatgtcccacatcagataaaaaagtggaggttgaacattttataagt 350  Q
    |||| |||||||||||||||||||||| ||||||| |||  ||||||||||  ||||||||    
T  299490 gcaagtgtgagttatatgtcccacatcggataaaacagtaaaggttgaacaccttataagt 299550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 303 - 355
Target Start/End: Original strand, 31509745 - 31509797
Alignment:
Q  303 atatgtcccacatcagataaaaaagtggaggttgaacattttataagtgagag 355  Q
    ||||||| |||||| |||| ||||||||||||||| || ||||||||||||||    
T  31509745 atatgtctcacatcggatagaaaagtggaggttgagcactttataagtgagag 31509797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 289 - 340
Target Start/End: Original strand, 32487394 - 32487445
Alignment:
Q  289 tgcaattgtgagttatatgtcccacatcagataaaaaagtggaggttgaaca 340  Q
    ||||| |||||||||||||||||||||| ||||||| |||  ||||||||||    
T  32487394 tgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaaca 32487445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 295 - 350
Target Start/End: Original strand, 38427554 - 38427609
Alignment:
Q  295 tgtgagttatatgtcccacatcagataaaaaagtggaggttgaacattttataagt 350  Q
    |||||||||||||||||||||  |||| ||||||  ||||||||||| ||||||||    
T  38427554 tgtgagttatatgtcccacattggatagaaaagtaaaggttgaacatcttataagt 38427609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 295 - 357
Target Start/End: Original strand, 300965 - 301027
Alignment:
Q  295 tgtgagttatatgtcccacatcagataaaaaagtggaggttgaacattttataagtgagagaa 357  Q
    |||| ||||||||||||||||||||||||| |||  |||||||| |  |||||||| ||||||    
T  300965 tgtgggttatatgtcccacatcagataaaacagtaaaggttgaataccttataagtaagagaa 301027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 289 - 355
Target Start/End: Complemental strand, 9498812 - 9498746
Alignment:
Q  289 tgcaattgtgagttatatgtcccacatcagataaaaaagtggaggttgaacattttataagtgagag 355  Q
    ||||| ||||||||||||||| ||||||||||| || |||  ||||||||||  |||||||| ||||    
T  9498812 tgcaaatgtgagttatatgtctcacatcagatagaatagtaaaggttgaacaccttataagtaagag 9498746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 282 - 340
Target Start/End: Complemental strand, 26074947 - 26074889
Alignment:
Q  282 tgttgtatgcaattgtgagttatatgtcccacatcagataaaaaagtggaggttgaaca 340  Q
    |||||| | ||| |||||||||||||||||||||| ||||||| |||  ||||||||||    
T  26074947 tgttgtgtacaagtgtgagttatatgtcccacatcggataaaagagtaaaggttgaaca 26074889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 289 - 355
Target Start/End: Complemental strand, 40296473 - 40296407
Alignment:
Q  289 tgcaattgtgagttatatgtcccacatcagataaaaaagtggaggttgaacattttataagtgagag 355  Q
    ||||| |||||||||||||||||||||| ||||||| ||   ||||||||||  |||||||| ||||    
T  40296473 tgcaagtgtgagttatatgtcccacatcggataaaatagaaaaggttgaacaccttataagtaagag 40296407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 282 - 355
Target Start/End: Original strand, 6224189 - 6224262
Alignment:
Q  282 tgttgtatgcaattgtgagttatatgtcccacatcagataaaaaagtggaggttgaacattttataagtgagag 355  Q
    |||||| | ||| ||||||||||||||||||| || ||||||| |||  ||||||||||  |||||||| ||||    
T  6224189 tgttgtgtacaagtgtgagttatatgtcccacttcggataaaagagtaaaggttgaacaccttataagtaagag 6224262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 282 - 327
Target Start/End: Complemental strand, 24489369 - 24489324
Alignment:
Q  282 tgttgtatgcaattgtgagttatatgtcccacatcagataaaaaag 327  Q
    |||||| | ||| ||||||||||||||||||||||||||| |||||    
T  24489369 tgttgtgttcaagtgtgagttatatgtcccacatcagatagaaaag 24489324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 282 - 355
Target Start/End: Original strand, 41632775 - 41632848
Alignment:
Q  282 tgttgtatgcaattgtgagttatatgtcccacatcagataaaaaagtggaggttgaacattttataagtgagag 355  Q
    |||||| ||||| ||| ||||||||||| |||||| |||| ||||||  ||||||||||  |||||||| ||||    
T  41632775 tgttgtgtgcaagtgtaagttatatgtctcacatcggatagaaaagtaaaggttgaacaccttataagtaagag 41632848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 295 - 355
Target Start/End: Original strand, 26074324 - 26074384
Alignment:
Q  295 tgtgagttatatgtcccacatcagataaaaaagtggaggttgaacattttataagtgagag 355  Q
    ||||||||||||||||||||||||||| |||| |  || |||||||  |||||||| ||||    
T  26074324 tgtgagttatatgtcccacatcagatagaaaactaaagattgaacaccttataagtaagag 26074384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 46; Significance: 5e-17; HSPs: 37)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 273 - 358
Target Start/End: Original strand, 8327888 - 8327973
Alignment:
Q  273 tgaaattcatgttgtatgcaattgtgagttatatgtcccacatcagataaaaaagtggaggttgaacattttataagtgagagaac 358  Q
    ||||||||||||||| ||||| |||||||||||||||||||||| ||||||| |||  ||| |||| || |||||||| |||||||    
T  8327888 tgaaattcatgttgtgtgcaagtgtgagttatatgtcccacatcggataaaagagtaaaggatgaatatcttataagtaagagaac 8327973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 284 - 355
Target Start/End: Complemental strand, 39336392 - 39336321
Alignment:
Q  284 ttgtatgcaattgtgagttatatgtcccacatcagataaaaaagtggaggttgaacattttataagtgagag 355  Q
    |||| ||||| |||||||||||||||||||||| |||| |||  ||||||||||||| ||||||||||||||    
T  39336392 ttgtgtgcaagtgtgagttatatgtcccacatcggatagaaagttggaggttgaacactttataagtgagag 39336321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 282 - 358
Target Start/End: Complemental strand, 43346956 - 43346880
Alignment:
Q  282 tgttgtatgcaattgtgagttatatgtcccacatcagataaaaaagtggaggttgaacattttataagtgagagaac 358  Q
    |||||| | ||| |||||||||||||||||||||||||||||| |||  ||||||||||  |||||||| |||||||    
T  43346956 tgttgtgtacaagtgtgagttatatgtcccacatcagataaaatagtaaaggttgaacaccttataagtaagagaac 43346880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 281 - 340
Target Start/End: Complemental strand, 33803418 - 33803359
Alignment:
Q  281 atgttgtatgcaattgtgagttatatgtcccacatcagataaaaaagtggaggttgaaca 340  Q
    ||||||| |||||||||||||||||||||||||||| ||||||| |||  ||||||||||    
T  33803418 atgttgtgtgcaattgtgagttatatgtcccacatcggataaaatagtaaaggttgaaca 33803359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 282 - 340
Target Start/End: Original strand, 39914245 - 39914303
Alignment:
Q  282 tgttgtatgcaattgtgagttatatgtcccacatcagataaaaaagtggaggttgaaca 340  Q
    |||||| ||||| ||||||||||||||| |||||||||||||| ||| |||||||||||    
T  39914245 tgttgtgtgcaagtgtgagttatatgtctcacatcagataaaacagtagaggttgaaca 39914303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 281 - 358
Target Start/End: Complemental strand, 33175830 - 33175753
Alignment:
Q  281 atgttgtatgcaattgtgagttatatgtcccacatcagataaaaaagtggaggttgaacattttataagtgagagaac 358  Q
    ||||||| | ||| ||||||||||||||| ||||||||||| ||||||  ||||||||||  |||||||| |||||||    
T  33175830 atgttgtgtacaagtgtgagttatatgtctcacatcagatagaaaagtaaaggttgaacaccttataagtaagagaac 33175753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 282 - 355
Target Start/End: Complemental strand, 47965080 - 47965007
Alignment:
Q  282 tgttgtatgcaattgtgagttatatgtcccacatcagataaaaaagtggaggttgaacattttataagtgagag 355  Q
    |||||| ||||| ||||||||||||||   ||||| |||| ||||||||||||| |||||| ||||||||||||    
T  47965080 tgttgtgtgcaagtgtgagttatatgttttacatcggatagaaaagtggaggttaaacattatataagtgagag 47965007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 281 - 354
Target Start/End: Complemental strand, 54451342 - 54451269
Alignment:
Q  281 atgttgtatgcaattgtgagttatatgtcccacatcagataaaaaagtggaggttgaacattttataagtgaga 354  Q
    ||||||| ||||  ||||||||||||||||||||||| | | |||| ||||||||||||| ||||| |||||||    
T  54451342 atgttgtgtgcatatgtgagttatatgtcccacatcaaaaagaaaaatggaggttgaacactttatgagtgaga 54451269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 295 - 358
Target Start/End: Original strand, 25991409 - 25991472
Alignment:
Q  295 tgtgagttatatgtcccacatcagataaaaaagtggaggttgaacattttataagtgagagaac 358  Q
    ||||||| ||||||||||||||| ||||| ||||  | ||| ||||||||||||||||||||||    
T  25991409 tgtgagtaatatgtcccacatcaaataaacaagttaatgttaaacattttataagtgagagaac 25991472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 295 - 358
Target Start/End: Complemental strand, 36986100 - 36986037
Alignment:
Q  295 tgtgagttatatgtcccacatcagataaaaaagtggaggttgaacattttataagtgagagaac 358  Q
    ||||||||||||||||||||||  ||| ||||||| |||||||  | |||||||||||||||||    
T  36986100 tgtgagttatatgtcccacatcgaatagaaaagtgaaggttgagaactttataagtgagagaac 36986037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 295 - 358
Target Start/End: Complemental strand, 37011539 - 37011476
Alignment:
Q  295 tgtgagttatatgtcccacatcagataaaaaagtggaggttgaacattttataagtgagagaac 358  Q
    ||||||||||||||||||||||  ||| ||||||| |||||||  | |||||||||||||||||    
T  37011539 tgtgagttatatgtcccacatcgaatagaaaagtgaaggttgagaactttataagtgagagaac 37011476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 284 - 358
Target Start/End: Complemental strand, 29644744 - 29644670
Alignment:
Q  284 ttgtatgcaattgtgagttatatgtcccacatcagataaaaaagtggaggttgaacattttataagtgagagaac 358  Q
    |||| ||||| |||||||||||||||||||||| ||| ||| |||  ||||||||||  |||||||| |||||||    
T  29644744 ttgtgtgcaagtgtgagttatatgtcccacatcggattaaagagtaaaggttgaacaccttataagtaagagaac 29644670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 282 - 372
Target Start/End: Complemental strand, 42342553 - 42342463
Alignment:
Q  282 tgttgtatgcaattgtgagttatatgtcccacatcagataaaaaagtggaggttgaacattttataagtgagagaacacatgaatctattg 372  Q
    |||||| ||||| |||||||||||||||||||||| ||||||| |||  ||||| ||||  |||||||| |||| || ||| |||| ||||    
T  42342553 tgttgtgtgcaagtgtgagttatatgtcccacatccgataaaagagtaaaggttcaacaccttataagtaagaggacccataaatccattg 42342463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 282 - 372
Target Start/End: Complemental strand, 47964683 - 47964593
Alignment:
Q  282 tgttgtatgcaattgtgagttatatgtcccacatcagataaaaaagtggaggttgaacattttataagtgagagaacacatgaatctattg 372  Q
    |||||| ||||| |||||||| |||||||| |||| |||| ||| |||||||||||||  | |||||||||||| || ||| || ||||||    
T  47964683 tgttgtgtgcaagtgtgagttgtatgtcccgcatcggatagaaatgtggaggttgaacgctatataagtgagaggacccataaacctattg 47964593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 282 - 339
Target Start/End: Original strand, 2299969 - 2300026
Alignment:
Q  282 tgttgtatgcaattgtgagttatatgtcccacatcagataaaaaagtggaggttgaac 339  Q
    |||||| ||||| |||| |||||||||||||| ||||||| |||||||||||| ||||    
T  2299969 tgttgtgtgcaagtgtgggttatatgtcccacgtcagatagaaaagtggaggtagaac 2300026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 282 - 355
Target Start/End: Original strand, 15773185 - 15773258
Alignment:
Q  282 tgttgtatgcaattgtgagttatatgtcccacatcagataaaaaagtggaggttgaacattttataagtgagag 355  Q
    |||||| ||||| ||||||||||||||||||||||  |||||| |||  | ||||||||| |||||||| ||||    
T  15773185 tgttgtgtgcaagtgtgagttatatgtcccacatcgaataaaagagtaaaagttgaacatcttataagtaagag 15773258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 282 - 355
Target Start/End: Complemental strand, 25739590 - 25739517
Alignment:
Q  282 tgttgtatgcaattgtgagttatatgtcccacatcagataaaaaagtggaggttgaacattttataagtgagag 355  Q
    |||||| ||||| |||||||||||||||||||||| ||||||| |||  | |||||||||  ||||||| ||||    
T  25739590 tgttgtgtgcaagtgtgagttatatgtcccacatcggataaaatagtaaaagttgaacatcatataagtaagag 25739517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 282 - 355
Target Start/End: Original strand, 31190010 - 31190083
Alignment:
Q  282 tgttgtatgcaattgtgagttatatgtcccacatcagataaaaaagtggaggttgaacattttataagtgagag 355  Q
    |||||| ||||| ||||||| |||||||||||||| ||||||| |||  ||||||||||  |||||||| ||||    
T  31190010 tgttgtgtgcaagtgtgagtgatatgtcccacatcggataaaagagtaaaggttgaacaccttataagttagag 31190083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 282 - 355
Target Start/End: Original strand, 35946515 - 35946588
Alignment:
Q  282 tgttgtatgcaattgtgagttatatgtcccacatcagataaaaaagtggaggttgaacattttataagtgagag 355  Q
    |||||| | ||| |||||||||||||||||||||| ||||||| |||  ||||||||||  |||||||| ||||    
T  35946515 tgttgtgtacaagtgtgagttatatgtcccacatcggataaaacagtaaaggttgaacaccttataagtaagag 35946588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 282 - 355
Target Start/End: Complemental strand, 54017981 - 54017908
Alignment:
Q  282 tgttgtatgcaattgtgagttatatgtcccacatcagataaaaaagtggaggttgaacattttataagtgagag 355  Q
    |||||| ||||| |||||||||||||||| ||||| ||||||| |||  ||||||||||  |||||||| ||||    
T  54017981 tgttgtgtgcaagtgtgagttatatgtcctacatcggataaaagagtaaaggttgaacaccttataagtaagag 54017908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 281 - 357
Target Start/End: Complemental strand, 46546491 - 46546415
Alignment:
Q  281 atgttgtatgcaattgtgagttatatgtcccacatcagataaaaaagtggaggttgaacattttataagtgagagaa 357  Q
    ||||||| || || |||||||||||||||| ||||  |||  ||| |||||||||||||| ||||||||| ||||||    
T  46546491 atgttgtgtgtaagtgtgagttatatgtcctacattggattgaaatgtggaggttgaacactttataagttagagaa 46546415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 289 - 369
Target Start/End: Complemental strand, 50612610 - 50612530
Alignment:
Q  289 tgcaattgtgagttatatgtcccacatcagataaaaaagtggaggttgaacattttataagtgagagaacacatgaatcta 369  Q
    ||||| |||||||||||||||||||||| ||||||| |||  || |||||||  |||||||| |||| || ||| ||||||    
T  50612610 tgcaagtgtgagttatatgtcccacatcggataaaatagtaaagattgaacaccttataagtaagaggactcataaatcta 50612530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 282 - 329
Target Start/End: Complemental strand, 12747917 - 12747870
Alignment:
Q  282 tgttgtatgcaattgtgagttatatgtcccacatcagataaaaaagtg 329  Q
    |||||| ||||| |||||||||||||||||||||| |||| |||||||    
T  12747917 tgttgtgtgcaagtgtgagttatatgtcccacatcggatagaaaagtg 12747870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 289 - 340
Target Start/End: Original strand, 22304246 - 22304297
Alignment:
Q  289 tgcaattgtgagttatatgtcccacatcagataaaaaagtggaggttgaaca 340  Q
    ||||| |||||||||||||||||||||| ||||||| |||  ||||||||||    
T  22304246 tgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaaca 22304297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 320 - 355
Target Start/End: Complemental strand, 30399701 - 30399666
Alignment:
Q  320 taaaaaagtggaggttgaacattttataagtgagag 355  Q
    ||||||| ||||||||||||||||||||||||||||    
T  30399701 taaaaaattggaggttgaacattttataagtgagag 30399666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 282 - 341
Target Start/End: Original strand, 53577357 - 53577416
Alignment:
Q  282 tgttgtatgcaattgtgagttatatgtcccacatcagataaaaaagtggaggttgaacat 341  Q
    |||||| ||||| ||||||||||||||| |||||| ||||||| |||  |||||||||||    
T  53577357 tgttgtgtgcaagtgtgagttatatgtcacacatcggataaaacagtaaaggttgaacat 53577416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 323 - 357
Target Start/End: Original strand, 2417351 - 2417385
Alignment:
Q  323 aaaagtggaggttgaacattttataagtgagagaa 357  Q
    |||||||||| ||||||||||||||||||||||||    
T  2417351 aaaagtggagattgaacattttataagtgagagaa 2417385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 289 - 355
Target Start/End: Complemental strand, 21832501 - 21832435
Alignment:
Q  289 tgcaattgtgagttatatgtcccacatcagataaaaaagtggaggttgaacattttataagtgagag 355  Q
    ||||| |||||||||||||||||||||  |||| ||||||  ||||||||||  |||||||| ||||    
T  21832501 tgcaagtgtgagttatatgtcccacattggatagaaaagtaaaggttgaacaccttataagtaagag 21832435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 282 - 324
Target Start/End: Complemental strand, 22304113 - 22304071
Alignment:
Q  282 tgttgtatgcaattgtgagttatatgtcccacatcagataaaa 324  Q
    |||||| | ||| ||||||||||||||||||||||||||||||    
T  22304113 tgttgtgtacaagtgtgagttatatgtcccacatcagataaaa 22304071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 281 - 355
Target Start/End: Original strand, 25317150 - 25317224
Alignment:
Q  281 atgttgtatgcaattgtgagttatatgtcccacatcagataaaaaagtggaggttgaacattttataagtgagag 355  Q
    |||||| ||| || |||||||||| ||||||||| |||||  ||||||||||||||| || ||| ||| ||||||    
T  25317150 atgttgcatggaagtgtgagttatgtgtcccacaccagatggaaaagtggaggttgagcactttgtaactgagag 25317224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 282 - 372
Target Start/End: Original strand, 25755387 - 25755477
Alignment:
Q  282 tgttgtatgcaattgtgagttatatgtcccacatcagataaaaaagtggaggttgaacattttataagtgagagaacacatgaatctattg 372  Q
    |||||| | ||| ||||||||||||||| |||||||||||||| |||  |||||||| |  |||||||| |||| || ||| |||| ||||    
T  25755387 tgttgtgtacaagtgtgagttatatgtctcacatcagataaaagagtaaaggttgaataccttataagtaagaggactcataaatccattg 25755477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 282 - 340
Target Start/End: Original strand, 43346643 - 43346701
Alignment:
Q  282 tgttgtatgcaattgtgagttatatgtcccacatcagataaaaaagtggaggttgaaca 340  Q
    |||||| ||||| |||||||| ||||||||||||| ||||||| |||  ||||||||||    
T  43346643 tgttgtgtgcaagtgtgagttgtatgtcccacatcggataaaatagtaaaggttgaaca 43346701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 282 - 356
Target Start/End: Original strand, 52634669 - 52634743
Alignment:
Q  282 tgttgtatgcaattgtgagttatatgtcccacatcagataaaaaagtggaggttgaacattttataagtgagaga 356  Q
    |||||| | ||| |||||||||||||||||||||| ||||||| |||  |||||||||   |||||||| |||||    
T  52634669 tgttgtgtacaagtgtgagttatatgtcccacatcggataaaacagtaaaggttgaacgccttataagtaagaga 52634743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 282 - 355
Target Start/End: Complemental strand, 29645067 - 29644994
Alignment:
Q  282 tgttgtatgcaattgtgagttatatgtcccacatcagataaaaaagtggaggttgaacattttataagtgagag 355  Q
    |||||| ||||| ||| |||||||||||||||||| ||||||| |||  ||||| ||||  |||||||| ||||    
T  29645067 tgttgtgtgcaagtgtaagttatatgtcccacatcggataaaagagtaaaggttaaacaccttataagtaagag 29644994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 290 - 355
Target Start/End: Complemental strand, 53118131 - 53118066
Alignment:
Q  290 gcaattgtgagttatatgtcccacatcagataaaaaagtggaggttgaacattttataagtgagag 355  Q
    |||| |||||||||||||| ||| ||| ||||||| |||  ||||||||||  |||||||||||||    
T  53118131 gcaagtgtgagttatatgttccatatcggataaaagagtaaaggttgaacaccttataagtgagag 53118066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 295 - 355
Target Start/End: Original strand, 11661541 - 11661601
Alignment:
Q  295 tgtgagttatatgtcccacatcagataaaaaagtggaggttgaacattttataagtgagag 355  Q
    |||||||||||||||||||||| ||||||| |||   |||| ||||| |||||||| ||||    
T  11661541 tgtgagttatatgtcccacatcggataaaatagtaacggttaaacatcttataagtaagag 11661601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 282 - 326
Target Start/End: Complemental strand, 33809173 - 33809129
Alignment:
Q  282 tgttgtatgcaattgtgagttatatgtcccacatcagataaaaaa 326  Q
    |||||| ||||| ||| ||||||||||||||||||||||| ||||    
T  33809173 tgttgtgtgcaagtgtaagttatatgtcccacatcagatagaaaa 33809129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 45; Significance: 2e-16; HSPs: 27)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 282 - 354
Target Start/End: Original strand, 6071125 - 6071197
Alignment:
Q  282 tgttgtatgcaattgtgagttatatgtcccacatcagataaaaaagtggaggttgaacattttataagtgaga 354  Q
    |||||| ||||| |||||||||||||||||||||   ||| |||||||||||||||||| |||||||||||||    
T  6071125 tgttgtgtgcaagtgtgagttatatgtcccacattgaatagaaaagtggaggttgaacactttataagtgaga 6071197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 282 - 354
Target Start/End: Original strand, 8481920 - 8481991
Alignment:
Q  282 tgttgtatgcaattgtgagttatatgtcccacatcagataaaaaagtggaggttgaacattttataagtgaga 354  Q
    |||||| ||||| |||||||||||||||| |||||||||| |||||||||||||||||| ||||||| |||||    
T  8481920 tgttgtgtgcaagtgtgagttatatgtcc-acatcagatataaaagtggaggttgaacactttataaatgaga 8481991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 282 - 354
Target Start/End: Original strand, 33605647 - 33605719
Alignment:
Q  282 tgttgtatgcaattgtgagttatatgtcccacatcagataaaaaagtggaggttgaacattttataagtgaga 354  Q
    |||||| ||||| |||||| |||||||| ||||||||||| |||||||||||||||||| ||||||| |||||    
T  33605647 tgttgtgtgcaagtgtgagctatatgtctcacatcagatagaaaagtggaggttgaacactttataattgaga 33605719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 281 - 355
Target Start/End: Original strand, 10911557 - 10911632
Alignment:
Q  281 atgttgtatgcaattgtgagttatatgtcccacatcagat-aaaaaagtggaggttgaacattttataagtgagag 355  Q
    ||||||||||||| |||||||||||||||| ||||||||| ||||||||  ||||||||||  |||||||| ||||    
T  10911557 atgttgtatgcaagtgtgagttatatgtcctacatcagataaaaaaagtaaaggttgaacaccttataagtaagag 10911632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 289 - 355
Target Start/End: Original strand, 3409259 - 3409325
Alignment:
Q  289 tgcaattgtgagttatatgtcccacatcagataaaaaagtggaggttgaacattttataagtgagag 355  Q
    ||||| |||||||||||||||||||||||||||||| |||  ||||||||||  |||||||| ||||    
T  3409259 tgcaagtgtgagttatatgtcccacatcagataaaatagtaaaggttgaacaccttataagtaagag 3409325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 282 - 355
Target Start/End: Complemental strand, 2580037 - 2579964
Alignment:
Q  282 tgttgtatgcaattgtgagttatatgtcccacatcagataaaaaagtggaggttgaacattttataagtgagag 355  Q
    |||||| ||||| |||||||||||||||||||||| ||||||| |||  ||||||||||  |||||||| ||||    
T  2580037 tgttgtgtgcaagtgtgagttatatgtcccacatcggataaaagagtaaaggttgaacacattataagtaagag 2579964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 282 - 355
Target Start/End: Complemental strand, 12092647 - 12092574
Alignment:
Q  282 tgttgtatgcaattgtgagttatatgtcccacatcagataaaaaagtggaggttgaacattttataagtgagag 355  Q
    |||||| |||||  ||| |||| |||||||||||| |||| ||||||||||||||| || ||||||||||||||    
T  12092647 tgttgtgtgcaagggtgtgttagatgtcccacatcggatagaaaagtggaggttgagcactttataagtgagag 12092574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 295 - 355
Target Start/End: Complemental strand, 9062501 - 9062441
Alignment:
Q  295 tgtgagttatatgtcccacatcagataaaaaagtggaggttgaacattttataagtgagag 355  Q
    |||||||||||||||||||||| ||||||| |||  ||||||||||| |||||||| ||||    
T  9062501 tgtgagttatatgtcccacatcggataaaatagtaaaggttgaacatcttataagtaagag 9062441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 289 - 348
Target Start/End: Original strand, 33605975 - 33606034
Alignment:
Q  289 tgcaattgtgagttatatgtcccacatcagataaaaaagtggaggttgaacattttataa 348  Q
    ||||| ||| ||||||||||||||||||  ||| |||||||||||||||||| |||||||    
T  33605975 tgcaaatgtaagttatatgtcccacatcgaatagaaaagtggaggttgaacactttataa 33606034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 289 - 355
Target Start/End: Original strand, 2378126 - 2378192
Alignment:
Q  289 tgcaattgtgagttatatgtcccacatcagataaaaaagtggaggttgaacattttataagtgagag 355  Q
    ||||| |||||||||||||||||||||| ||||||| |||  ||||||||||  |||||||| ||||    
T  2378126 tgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacaccttataagtaagag 2378192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 289 - 355
Target Start/End: Original strand, 3409660 - 3409726
Alignment:
Q  289 tgcaattgtgagttatatgtcccacatcagataaaaaagtggaggttgaacattttataagtgagag 355  Q
    ||||| |||||||||||||| ||||||||||||||| |||  | ||||||||| |||||||| ||||    
T  3409660 tgcaagtgtgagttatatgtaccacatcagataaaatagtaaaagttgaacatcttataagtaagag 3409726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 289 - 355
Target Start/End: Original strand, 26544049 - 26544115
Alignment:
Q  289 tgcaattgtgagttatatgtcccacatcagataaaaaagtggaggttgaacattttataagtgagag 355  Q
    ||||| |||||||||||||||||||||| ||||||| |||  ||||||||||  |||||||| ||||    
T  26544049 tgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacacgttataagtaagag 26544115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 289 - 355
Target Start/End: Original strand, 29518503 - 29518569
Alignment:
Q  289 tgcaattgtgagttatatgtcccacatcagataaaaaagtggaggttgaacattttataagtgagag 355  Q
    ||||| |||||||||||||||||||||| ||||||| |||  ||||||||||  |||||||| ||||    
T  29518503 tgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacaccttataagtaagag 29518569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 289 - 355
Target Start/End: Original strand, 29518920 - 29518986
Alignment:
Q  289 tgcaattgtgagttatatgtcccacatcagataaaaaagtggaggttgaacattttataagtgagag 355  Q
    ||||| |||||||||||||||||||||| ||||||| |||  ||||||||||  |||||||| ||||    
T  29518920 tgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacaccttataagtaagag 29518986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 289 - 355
Target Start/End: Original strand, 32741179 - 32741245
Alignment:
Q  289 tgcaattgtgagttatatgtcccacatcagataaaaaagtggaggttgaacattttataagtgagag 355  Q
    ||||| |||||||||||||||||||||| ||||||| |||  ||||||||||  |||||||| ||||    
T  32741179 tgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacaccttataagtaagag 32741245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 282 - 350
Target Start/End: Original strand, 16454900 - 16454968
Alignment:
Q  282 tgttgtatgcaattgtgagttatatgtcccacatcagataaaaaagtggaggttgaacattttataagt 350  Q
    |||||| | ||| |||||||||| ||||||||||||||||||| |||  ||||||||||  ||||||||    
T  16454900 tgttgtgtacaaatgtgagttatgtgtcccacatcagataaaagagtaaaggttgaacaccttataagt 16454968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 289 - 348
Target Start/End: Complemental strand, 12071849 - 12071790
Alignment:
Q  289 tgcaattgtgagttatatgtcccacatcagataaaaaagtggaggttgaacattttataa 348  Q
    ||||| ||||||||||||||| | ||||||||| |||| ||||| ||||||| |||||||    
T  12071849 tgcaagtgtgagttatatgtctcgcatcagatagaaaaatggagtttgaacactttataa 12071790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 289 - 340
Target Start/End: Complemental strand, 14748496 - 14748445
Alignment:
Q  289 tgcaattgtgagttatatgtcccacatcagataaaaaagtggaggttgaaca 340  Q
    ||||| |||||||||||||||||||||| ||||||| |||  ||||||||||    
T  14748496 tgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaaca 14748445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 289 - 355
Target Start/End: Complemental strand, 593867 - 593801
Alignment:
Q  289 tgcaattgtgagttatatgtcccacatcagataaaaaagtggaggttgaacattttataagtgagag 355  Q
    ||||| |||||||| ||||||||||||| ||||||| |||  ||||||||||  |||||||| ||||    
T  593867 tgcaagtgtgagttgtatgtcccacatcggataaaagagtaaaggttgaacaccttataagtaagag 593801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 289 - 355
Target Start/End: Original strand, 35210204 - 35210270
Alignment:
Q  289 tgcaattgtgagttatatgtcccacatcagataaaaaagtggaggttgaacattttataagtgagag 355  Q
    ||||| ||||||||||||||| |||||| ||||||| |||  ||||||||||  |||||||| ||||    
T  35210204 tgcaagtgtgagttatatgtctcacatcggataaaatagtaaaggttgaacaccttataagtaagag 35210270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 295 - 340
Target Start/End: Complemental strand, 1950337 - 1950292
Alignment:
Q  295 tgtgagttatatgtcccacatcagataaaaaagtggaggttgaaca 340  Q
    |||||||||||||||||||||| ||||||| |||  ||||||||||    
T  1950337 tgtgagttatatgtcccacatcggataaaagagtaaaggttgaaca 1950292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 282 - 355
Target Start/End: Complemental strand, 2578607 - 2578535
Alignment:
Q  282 tgttgtatgcaattgtgagttatatgtcccacatcagataaaaaagtggaggttgaacattttataagtgagag 355  Q
    |||||| | ||| |||||||||||||||||||| | ||||||| |||  |||||||||| ||||||||| ||||    
T  2578607 tgttgtgtacaagtgtgagttatatgtcccaca-cggataaaagagtaaaggttgaacactttataagtaagag 2578535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 289 - 350
Target Start/End: Original strand, 3058226 - 3058287
Alignment:
Q  289 tgcaattgtgagttatatgtcccacatcagataaaaaagtggaggttgaacattttataagt 350  Q
    ||||| ||| |||||||||||||||||| ||||||| |||  ||||||||||  ||||||||    
T  3058226 tgcaagtgttagttatatgtcccacatcggataaaatagtaaaggttgaacaccttataagt 3058287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 295 - 340
Target Start/End: Original strand, 3415464 - 3415509
Alignment:
Q  295 tgtgagttatatgtcccacatcagataaaaaagtggaggttgaaca 340  Q
    ||||||||||||||||||||||| |||||| |||  ||||||||||    
T  3415464 tgtgagttatatgtcccacatcacataaaatagtaaaggttgaaca 3415509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 282 - 355
Target Start/End: Original strand, 16108056 - 16108129
Alignment:
Q  282 tgttgtatgcaattgtgagttatatgtcccacatcagataaaaaagtggaggttgaacattttataagtgagag 355  Q
    |||||| | ||| |||||||||||||| ||||||||||||||| |||  | ||||||||  |||||||| ||||    
T  16108056 tgttgtgtacaagtgtgagttatatgttccacatcagataaaagagtaaatgttgaacaccttataagtaagag 16108129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 295 - 355
Target Start/End: Original strand, 2377760 - 2377820
Alignment:
Q  295 tgtgagttatatgtcccacatcagataaaaaagtggaggttgaacattttataagtgagag 355  Q
    |||||||||||||||||||||| | ||||| |||  ||||||||||  |||||||| ||||    
T  2377760 tgtgagttatatgtcccacatcggttaaaagagtaaaggttgaacaccttataagtaagag 2377820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 295 - 355
Target Start/End: Complemental strand, 32460732 - 32460672
Alignment:
Q  295 tgtgagttatatgtcccacatcagataaaaaagtggaggttgaacattttataagtgagag 355  Q
    ||||||||||||||||||||||  |||||| |||  ||||||||||  |||||||| ||||    
T  32460732 tgtgagttatatgtcccacatcgtataaaatagtaaaggttgaacaccttataagtaagag 32460672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 32)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 282 - 355
Target Start/End: Complemental strand, 1085781 - 1085708
Alignment:
Q  282 tgttgtatgcaattgtgagttatatgtcccacatcagataaaaaagtggaggttgaacattttataagtgagag 355  Q
    |||||| ||||| |||||||||||||||||||||| ||||||| |||  |||||||||| ||||||||| ||||    
T  1085781 tgttgtgtgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacactttataagtaagag 1085708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 282 - 355
Target Start/End: Original strand, 30245487 - 30245560
Alignment:
Q  282 tgttgtatgcaattgtgagttatatgtcccacatcagataaaaaagtggaggttgaacattttataagtgagag 355  Q
    |||||| ||||| |||||||||||||||||||||||||||||| |||  ||||||||||  |||||||| ||||    
T  30245487 tgttgtgtgcaagtgtgagttatatgtcccacatcagataaaagagtaaaggttgaacaccttataagtaagag 30245560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 299 - 358
Target Start/End: Original strand, 10341842 - 10341901
Alignment:
Q  299 agttatatgtcccacatcagataaaaaagtggaggttgaacattttataagtgagagaac 358  Q
    ||||||||||| |||||| |||| |||||||||||||||||| |||||||||| ||||||    
T  10341842 agttatatgtctcacatcggatagaaaagtggaggttgaacactttataagtgggagaac 10341901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 284 - 350
Target Start/End: Original strand, 36622955 - 36623021
Alignment:
Q  284 ttgtatgcaattgtgagttatatgtcccacatcagataaaaaagtggaggttgaacattttataagt 350  Q
    |||| ||||| |||||||||||||||||||||| ||||||| |||  ||||| ||||||||||||||    
T  36622955 ttgtgtgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttaaacattttataagt 36623021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 282 - 355
Target Start/End: Original strand, 7517573 - 7517646
Alignment:
Q  282 tgttgtatgcaattgtgagttatatgtcccacatcagataaaaaagtggaggttgaacattttataagtgagag 355  Q
    |||||| ||||| |||||||||||||||||||||| ||||||| |||  ||||||||||  |||||||| ||||    
T  7517573 tgttgtgtgcaagtgtgagttatatgtcccacatcggataaaagagtaaaggttgaacaccttataagtaagag 7517646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 282 - 355
Target Start/End: Original strand, 7554018 - 7554091
Alignment:
Q  282 tgttgtatgcaattgtgagttatatgtcccacatcagataaaaaagtggaggttgaacattttataagtgagag 355  Q
    |||||| ||||| |||||||||||||||||||||| ||||||| |||  ||||||||||  |||||||| ||||    
T  7554018 tgttgtgtgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacaccttataagtaagag 7554091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 282 - 355
Target Start/End: Complemental strand, 22566827 - 22566754
Alignment:
Q  282 tgttgtatgcaattgtgagttatatgtcccacatcagataaaaaagtggaggttgaacattttataagtgagag 355  Q
    |||||||||||| ||||||| |||||||||||||| ||||||| |||  ||||||||||  |||||||| ||||    
T  22566827 tgttgtatgcaagtgtgagtaatatgtcccacatcggataaaagagtaaaggttgaacaccttataagtaagag 22566754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 282 - 372
Target Start/End: Complemental strand, 23542 - 23452
Alignment:
Q  282 tgttgtatgcaattgtgagttatatgtcccacatcagataaaaaagtggaggttgaacattttataagtgagagaacacatgaatctattg 372  Q
    |||||| |||||||||||||||||||| ||||||| |||| || |||  ||||||||||  |||||||| |||| || ||| || ||||||    
T  23542 tgttgtgtgcaattgtgagttatatgttccacatcggatacaatagtaaaggttgaacaccttataagtaagaggacccataaacctattg 23452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 282 - 340
Target Start/End: Complemental strand, 118466 - 118408
Alignment:
Q  282 tgttgtatgcaattgtgagttatatgtcccacatcagataaaaaagtggaggttgaaca 340  Q
    |||||| ||||| ||| ||||||||||||||||||||||| ||||||  ||||||||||    
T  118466 tgttgtgtgcaagtgtaagttatatgtcccacatcagatagaaaagtaaaggttgaaca 118408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 282 - 355
Target Start/End: Original strand, 30255332 - 30255405
Alignment:
Q  282 tgttgtatgcaattgtgagttatatgtcccacatcagataaaaaagtggaggttgaacattttataagtgagag 355  Q
    |||||| ||||| |||| ||||||||||||||||| ||||||| |||  ||||||||||  |||||||| ||||    
T  30255332 tgttgtgtgcaagtgtgcgttatatgtcccacatcggataaaagagtaaaggttgaacaccttataagtaagag 30255405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 282 - 355
Target Start/End: Complemental strand, 34218199 - 34218126
Alignment:
Q  282 tgttgtatgcaattgtgagttatatgtcccacatcagataaaaaagtggaggttgaacattttataagtgagag 355  Q
    |||||| | ||| ||||||||||||||| |||||| |||||||||||  | ||||||||  |||||||||||||    
T  34218199 tgttgtgtacaaatgtgagttatatgtctcacatcggataaaaaagtaaatgttgaacaccttataagtgagag 34218126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 282 - 339
Target Start/End: Complemental strand, 40094559 - 40094502
Alignment:
Q  282 tgttgtatgcaattgtgagttatatgtcccacatcagataaaaaagtggaggttgaac 339  Q
    |||||| ||||| |||||||||||||||| ||||||||||||| |||  |||||||||    
T  40094559 tgttgtgtgcaagtgtgagttatatgtccaacatcagataaaagagtaaaggttgaac 40094502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 282 - 355
Target Start/End: Original strand, 45434629 - 45434702
Alignment:
Q  282 tgttgtatgcaattgtgagttatatgtcccacatcagataaaaaagtggaggttgaacattttataagtgagag 355  Q
    |||||| | ||| ||| |||||||||||||||||| |||||||||||  ||||||||||  |||||||| ||||    
T  45434629 tgttgtgtacaagtgtaagttatatgtcccacatcggataaaaaagtaaaggttgaacaccttataagtaagag 45434702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 282 - 350
Target Start/End: Original strand, 43241488 - 43241556
Alignment:
Q  282 tgttgtatgcaattgtgagttatatgtcccacatcagataaaaaagtggaggttgaacattttataagt 350  Q
    |||||| ||||| |||||||||||||| ||||||| ||||||||| |  ||||||||||  ||||||||    
T  43241488 tgttgtgtgcaagtgtgagttatatgttccacatcggataaaaaaataaaggttgaacaccttataagt 43241556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 289 - 340
Target Start/End: Original strand, 14681510 - 14681561
Alignment:
Q  289 tgcaattgtgagttatatgtcccacatcagataaaaaagtggaggttgaaca 340  Q
    ||||| ||| |||||||||||||||||||||||||| |||  ||||||||||    
T  14681510 tgcaagtgtaagttatatgtcccacatcagataaaatagtaaaggttgaaca 14681561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 282 - 354
Target Start/End: Original strand, 37345909 - 37345983
Alignment:
Q  282 tgttgtatgcaattgtgagttatat--gtcccacatcagataaaaaagtggaggttgaacattttataagtgaga 354  Q
    |||||| ||||| ||||||||||||  |||  | ||| |||| ||||||||||||| ||||||||||||||||||    
T  37345909 tgttgtgtgcaagtgtgagttatatatgtcatatatctgatagaaaagtggaggttaaacattttataagtgaga 37345983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 284 - 355
Target Start/End: Complemental strand, 40230454 - 40230383
Alignment:
Q  284 ttgtatgcaattgtgagttatatgtcccacatcagataaaaaagtggaggttgaacattttataagtgagag 355  Q
    |||| ||||| ||| ||||||||||||||||||  ||||||||||  | ||||||||| |||||||| ||||    
T  40230454 ttgtgtgcaagtgtaagttatatgtcccacatcgaataaaaaagtaaaagttgaacatcttataagtaagag 40230383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 282 - 340
Target Start/End: Original strand, 30244694 - 30244752
Alignment:
Q  282 tgttgtatgcaattgtgagttatatgtcccacatcagataaaaaagtggaggttgaaca 340  Q
    |||||| ||||| |||||||||||||||||||||  ||||||| |||  ||||||||||    
T  30244694 tgttgtgtgcaagtgtgagttatatgtcccacattggataaaagagtaaaggttgaaca 30244752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 289 - 355
Target Start/End: Complemental strand, 37533168 - 37533102
Alignment:
Q  289 tgcaattgtgagttatatgtcccacatcagataaaaaagtggaggttgaacattttataagtgagag 355  Q
    ||||| |||||||||||||||||||||  ||||||| |||  ||||||||||  |||||||| ||||    
T  37533168 tgcaagtgtgagttatatgtcccacattggataaaatagtaaaggttgaacaccttataagtaagag 37533102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 282 - 372
Target Start/End: Original strand, 45433234 - 45433324
Alignment:
Q  282 tgttgtatgcaattgtgagttatatgtcccacatcagataaaaaagtggaggttgaacattttataagtgagagaacacatgaatctattg 372  Q
    |||||| | ||| |||||||||||||  ||||||| ||||||| |||  ||||||||||  |||||||| ||||||| ||| || ||||||    
T  45433234 tgttgtgtacaagtgtgagttatatgatccacatcggataaaagagtaaaggttgaacaccttataagtaagagaactcataaacctattg 45433324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 282 - 355
Target Start/End: Original strand, 16569189 - 16569262
Alignment:
Q  282 tgttgtatgcaattgtgagttatatgtcccacatcagataaaaaagtggaggttgaacattttataagtgagag 355  Q
    |||||||||||| ||||||||||||||| |||||| |||| || |||  |||||||| |  |||||||| ||||    
T  16569189 tgttgtatgcaagtgtgagttatatgtctcacatcggatagaacagtaaaggttgaataccttataagtaagag 16569262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 282 - 355
Target Start/End: Complemental strand, 16596473 - 16596400
Alignment:
Q  282 tgttgtatgcaattgtgagttatatgtcccacatcagataaaaaagtggaggttgaacattttataagtgagag 355  Q
    |||||||||||| ||||||||||||||| |||||| |||| || |||  |||||||| |  |||||||| ||||    
T  16596473 tgttgtatgcaagtgtgagttatatgtctcacatcggatagaacagtaaaggttgaataccttataagtaagag 16596400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 282 - 355
Target Start/End: Complemental strand, 22567203 - 22567131
Alignment:
Q  282 tgttgtatgcaattgtgagttatatgtcccacatcagataaaaaagtggaggttgaacattttataagtgagag 355  Q
    |||||||||||| ||||||| |||||| ||||||| ||||||| |||  ||||||||||  |||||||| ||||    
T  22567203 tgttgtatgcaagtgtgagtaatatgt-ccacatcggataaaagagtaaaggttgaacaccttataagtaagag 22567131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 289 - 350
Target Start/End: Original strand, 29157565 - 29157626
Alignment:
Q  289 tgcaattgtgagttatatgtcccacatcagataaaaaagtggaggttgaacattttataagt 350  Q
    ||||| |||||||||||||||||||| | ||||||| |||  ||||||||||  ||||||||    
T  29157565 tgcaagtgtgagttatatgtcccacaccggataaaatagtaaaggttgaacaccttataagt 29157626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 282 - 355
Target Start/End: Original strand, 30244263 - 30244336
Alignment:
Q  282 tgttgtatgcaattgtgagttatatgtcccacatcagataaaaaagtggaggttgaacattttataagtgagag 355  Q
    |||||| | ||| |||||||||||||||||||||| ||||||| |||  |||||||| |  |||||||| ||||    
T  30244263 tgttgtgtacaagtgtgagttatatgtcccacatcggataaaagagtaaaggttgaagaccttataagtaagag 30244336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 282 - 355
Target Start/End: Complemental strand, 36109082 - 36109009
Alignment:
Q  282 tgttgtatgcaattgtgagttatatgtcccacatcagataaaaaagtggaggttgaacattttataagtgagag 355  Q
    |||||| ||||| |||||||||||| || |||||| ||||||| |||  ||||||||||  |||||||| ||||    
T  36109082 tgttgtgtgcaagtgtgagttatatttctcacatcggataaaagagtaaaggttgaacaccttataagtaagag 36109009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 282 - 355
Target Start/End: Complemental strand, 36534949 - 36534876
Alignment:
Q  282 tgttgtatgcaattgtgagttatatgtcccacatcagataaaaaagtggaggttgaacattttataagtgagag 355  Q
    |||||| ||||| ||| | ||||||||||||| || ||||||| ||| |||||||||||  |||||||| ||||    
T  36534949 tgttgtgtgcaagtgtaacttatatgtcccacctcggataaaacagtagaggttgaacaccttataagtaagag 36534876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 282 - 355
Target Start/End: Complemental strand, 41910759 - 41910686
Alignment:
Q  282 tgttgtatgcaattgtgagttatatgtcccacatcagataaaaaagtggaggttgaacattttataagtgagag 355  Q
    |||||| || || |||||||||||||||||||||| ||||||| |||  |||||||| |  |||||| ||||||    
T  41910759 tgttgtgtgtaagtgtgagttatatgtcccacatcggataaaagagtaaaggttgaataccttataactgagag 41910686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 296 - 372
Target Start/End: Original strand, 11845198 - 11845274
Alignment:
Q  296 gtgagttatatgtcccacatcagataaaaaagtggaggttgaacattttataagtgagagaacacatgaatctattg 372  Q
    ||||||||||||| ||||||| ||||||| |||  ||||||||||  |||||||| |||| || ||| |||| ||||    
T  11845198 gtgagttatatgttccacatcggataaaatagtaaaggttgaacaccttataagtaagaggacccataaatccattg 11845274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 282 - 350
Target Start/End: Original strand, 24177428 - 24177496
Alignment:
Q  282 tgttgtatgcaattgtgagttatatgtcccacatcagataaaaaagtggaggttgaacattttataagt 350  Q
    |||||| ||||| | |||||||||||||||||||| ||||||| |||  ||| ||||||  ||||||||    
T  24177428 tgttgtgtgcaagtatgagttatatgtcccacatcggataaaagagtaaaggctgaacaccttataagt 24177496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 282 - 350
Target Start/End: Original strand, 30245070 - 30245138
Alignment:
Q  282 tgttgtatgcaattgtgagttatatgtcccacatcagataaaaaagtggaggttgaacattttataagt 350  Q
    |||||| | ||| |||||||||||||| ||||||| ||||||| |||  ||||||||||  ||||||||    
T  30245070 tgttgtgtacaagtgtgagttatatgttccacatcggataaaagagtaaaggttgaacaccttataagt 30245138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 295 - 355
Target Start/End: Original strand, 47129101 - 47129161
Alignment:
Q  295 tgtgagttatatgtcccacatcagataaaaaagtggaggttgaacattttataagtgagag 355  Q
    ||||||||||||||| |||||| ||||||| |||  ||||||||| | |||||||| ||||    
T  47129101 tgtgagttatatgtctcacatcggataaaatagtaaaggttgaacctcttataagtaagag 47129161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0113 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0113
Description:

Target: scaffold0113; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 282 - 354
Target Start/End: Original strand, 39831 - 39903
Alignment:
Q  282 tgttgtatgcaattgtgagttatatgtcccacatcagataaaaaagtggaggttgaacattttataagtgaga 354  Q
    |||||| | ||| |||||||||||||||||||||| |||| |||||||| ||||| ||  |||||||||||||    
T  39831 tgttgtgttcaagtgtgagttatatgtcccacatcggatagaaaagtggtggttggactctttataagtgaga 39903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0702 (Bit Score: 35; Significance: 0.0000000002; HSPs: 2)
Name: scaffold0702
Description:

Target: scaffold0702; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 289 - 355
Target Start/End: Complemental strand, 300 - 234
Alignment:
Q  289 tgcaattgtgagttatatgtcccacatcagataaaaaagtggaggttgaacattttataagtgagag 355  Q
    ||||| |||||||||||||||||||||| ||||||| |||  ||||||||||  |||||||| ||||    
T  300 tgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacaccttataagtaagag 234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0702; HSP #2
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 295 - 355
Target Start/End: Complemental strand, 666 - 606
Alignment:
Q  295 tgtgagttatatgtcccacatcagataaaaaagtggaggttgaacattttataagtgagag 355  Q
    |||||||||||||||||||||| | ||||| |||  ||||||||||  |||||||| ||||    
T  666 tgtgagttatatgtcccacatcggttaaaagagtaaaggttgaacaccttataagtaagag 606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0171 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0171
Description:

Target: scaffold0171; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 282 - 340
Target Start/End: Complemental strand, 17621 - 17563
Alignment:
Q  282 tgttgtatgcaattgtgagttatatgtcccacatcagataaaaaagtggaggttgaaca 340  Q
    |||||| ||||| ||||||||||||||| |||||||||||||| |||  ||||||||||    
T  17621 tgttgtgtgcaagtgtgagttatatgtcacacatcagataaaatagtaaaggttgaaca 17563  T

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Target: scaffold0734 (Bit Score: 34; Significance: 0.0000000007; HSPs: 2)
Name: scaffold0734
Description:

Target: scaffold0734; HSP #1
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 282 - 355
Target Start/End: Original strand, 5389 - 5462
Alignment:
Q  282 tgttgtatgcaattgtgagttatatgtcccacatcagataaaaaagtggaggttgaacattttataagtgagag 355  Q
    |||||| ||||| |||||||||||||||| ||||| ||||||| |||  ||||||||||  |||||||| ||||    
T  5389 tgttgtgtgcaagtgtgagttatatgtcctacatcggataaaatagtaaaggttgaacaccttataagtaagag 5462  T

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Target: scaffold0734; HSP #2
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 282 - 355
Target Start/End: Original strand, 5770 - 5843
Alignment:
Q  282 tgttgtatgcaattgtgagttatatgtcccacatcagataaaaaagtggaggttgaacattttataagtgagag 355  Q
    |||||| ||||| ||||||||||||||| |||||| ||||||| |||  ||||||||||  |||||||| ||||    
T  5770 tgttgtgtgcaagtgtgagttatatgtcgcacatcggataaaatagtaaaggttgaacaccttataagtaagag 5843  T

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Target: scaffold0391 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0391
Description:

Target: scaffold0391; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 282 - 341
Target Start/End: Complemental strand, 3150 - 3091
Alignment:
Q  282 tgttgtatgcaattgtgagttatatgtcccacatcagataaaaaagtggaggttgaacat 341  Q
    |||||| ||||  |||||||||||||||||||||| ||||||| |||  |||||||||||    
T  3150 tgttgtgtgcaggtgtgagttatatgtcccacatcggataaaagagtaaaggttgaacat 3091  T

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Target: scaffold0078 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0078
Description:

Target: scaffold0078; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 282 - 355
Target Start/End: Original strand, 5350 - 5423
Alignment:
Q  282 tgttgtatgcaattgtgagttatatgtcccacatcagataaaaaagtggaggttgaacattttataagtgagag 355  Q
    |||||| ||||| |||||||||||||| ||||||| |||| || |||  ||||||||||  |||||||| ||||    
T  5350 tgttgtgtgcaagtgtgagttatatgttccacatcggatagaacagtaaaggttgaacaccttataagtaagag 5423  T

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