View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF3327_low_57 (Length: 238)

Name: NF3327_low_57
Description: NF3327
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF3327_low_57
NF3327_low_57
[»] chr5 (5 HSPs)
chr5 (1-219)||(2998044-2998260)
chr5 (7-208)||(2998256-2998456)
chr5 (38-208)||(2997872-2998043)
chr5 (1-195)||(2998457-2998650)
chr5 (155-218)||(2997783-2997846)
[»] chr2 (7 HSPs)
chr2 (35-208)||(32717186-32717360)
chr2 (7-219)||(32716539-32716750)
chr2 (7-208)||(32716746-32716946)
chr2 (155-219)||(32714065-32714129)
chr2 (155-219)||(32716479-32716543)
chr2 (37-208)||(32716981-32717153)
chr2 (1-195)||(32717361-32717554)
[»] chr6 (4 HSPs)
chr6 (49-208)||(14904774-14904934)
chr6 (87-208)||(14904981-14905103)
chr6 (108-204)||(14905192-14905289)
chr6 (13-206)||(14905397-14905589)
[»] chr8 (9 HSPs)
chr8 (164-219)||(34534106-34534161)
chr8 (147-208)||(34916680-34916742)
chr8 (157-208)||(34544960-34545011)
chr8 (157-215)||(34549085-34549143)
chr8 (158-208)||(39848041-39848091)
chr8 (172-207)||(39848916-39848951)
chr8 (143-219)||(34538924-34539001)
chr8 (169-214)||(34544678-34544723)
chr8 (169-214)||(34916053-34916098)
[»] chr4 (1 HSPs)
chr4 (157-208)||(44474143-44474194)
[»] chr3 (1 HSPs)
chr3 (164-208)||(7046904-7046948)


Alignment Details
Target: chr5 (Bit Score: 184; Significance: 1e-99; HSPs: 5)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 184; E-Value: 1e-99
Query Start/End: Original strand, 1 - 219
Target Start/End: Original strand, 2998044 - 2998260
Alignment:
Q  1 gaagacggacatggaaaggacggataatatatccccatcaagaacaatttttgagggtgaattctcgagaaattcccgtaatggttacgacacccttaaa 100  Q
    ||||||||||| |||||||||| |||||||||||  || || ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  2998044 gaagacggacagggaaaggacgaataatatatcc--ataaaaaacaatttttgagggtgaattctcgagaaattcccgtaatggttacggcacccttaaa 2998141  T
Q  101 aaatctgatggggatatctacattggtaactttgagaacaatcttttccatggcagggaaagcacacatggtcaaatggaacaatatatgagggtgattg 200  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2998142 aaatctgatggggatatctacattggtaactttgagaacaatattttccatggcagggaaagcacacatggtcaaatggaacaatatatgagggtgattg 2998241  T
Q  201 ggttgatgaacaaaggaca 219  Q
    |||||||||||||||||||    
T  2998242 ggttgatgaacaaaggaca 2998260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 7 - 208
Target Start/End: Original strand, 2998256 - 2998456
Alignment:
Q  7 ggacatggaaaggacggataatatatccccatcaagaacaatttttgagggtgaattctcgagaaattcccgtaatggttacgacacccttaaaaaatct 106  Q
    ||||| ||||||||||||| ||||||||  |||| |||||| |||||||||||||||||| |  ||||||||| || || |||||||||| | ||||||     
T  2998256 ggacagggaaaggacggatcatatatcc--atcaggaacaagttttgagggtgaattctccatgaattcccgtcatagtcacgacaccctgacaaaatcc 2998353  T
Q  107 gatggggatatctacattggtaactttgagaacaatcttttccatggc-agggaaagcacacatggtcaaatggaacaatatatgagggtgattgggttg 205  Q
    ||||||||||||||| |||||||||| || ||| |||||||||||||| | |||||| |||  ||||||||||||||||||||  |||||| |||| |||    
T  2998354 gatggggatatctacgttggtaacttcgataacgatcttttccatggcaacggaaagtacatgtggtcaaatggaacaatatacaagggtggttggtttg 2998453  T
Q  206 atg 208  Q
    |||    
T  2998454 atg 2998456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 38 - 208
Target Start/End: Original strand, 2997872 - 2998043
Alignment:
Q  38 tcaagaacaatttttgagggtgaattctcgagaaattcccgtaatggttacgacacccttaaaaaatctgatggggatatctacattggtaactttgaga 137  Q
    |||||| ||| |||||||||||||||||  || ||||| ||| ||||| | | ||| |||| ||||||  |||||||| ||| ||||||||||||||| |    
T  2997872 tcaagagcaagttttgagggtgaattctttaggaattctcgtcatggtcatggcactcttacaaaatccaatggggatgtcttcattggtaactttgaaa 2997971  T
Q  138 acaatcttttccatggca-gggaaagcacacatggtcaaatggaacaatatatgagggtgattgggttgatg 208  Q
    |  ||||||||||||||| ||||||| |||||||||||| ||||||||||||||||||||||||||||||||    
T  2997972 atgatcttttccatggcaagggaaagtacacatggtcaagtggaacaatatatgagggtgattgggttgatg 2998043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 195
Target Start/End: Original strand, 2998457 - 2998650
Alignment:
Q  1 gaagacggacatggaaaggacggataatatatccccatcaagaacaatttttgagggtgaattctcgagaaattcccgtaatggttacgacacccttaaa 100  Q
    ||||| ||||| ||||||| ||||| |||||| |  |||| || |||||||||||||||||||||| |  || |||||| |||||  || |||||||| |    
T  2998457 gaagaaggacagggaaaggtcggatcatatattc--atcaggatcaatttttgagggtgaattctccaagaactcccgtcatggtcgcggcacccttaca 2998554  T
Q  101 aaatctgatggggatatctacattggtaactttgagaacaatcttttccatggc-agggaaagcacacatggtcaaatggaacaatatatgagggt 195  Q
    |||||  |||||||||||||| |||||||||| |||||  || |||| |||||| |||||||| ||||||| | |||| |||||||||||||||||    
T  2998555 aaatccaatggggatatctacgttggtaacttcgagaatgatatttttcatggcaagggaaagtacacatgtttaaatagaacaatatatgagggt 2998650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 155 - 218
Target Start/End: Original strand, 2997783 - 2997846
Alignment:
Q  155 agggaaagcacacatggtcaaatggaacaatatatgagggtgattgggttgatgaacaaaggac 218  Q
    |||||||| |||||||||||| ||||||||| |||||||||||||||||| ||||| |||||||    
T  2997783 agggaaagtacacatggtcaagtggaacaatctatgagggtgattgggttaatgaaaaaaggac 2997846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 91; Significance: 3e-44; HSPs: 7)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 35 - 208
Target Start/End: Original strand, 32717186 - 32717360
Alignment:
Q  35 ccatcaagaacaatttttgagggtgaattctcgagaaattcccgtaatggttacgacacccttaaaaaatctgatggggatatctacattggtaactttg 134  Q
    |||||| || ||| ||||||||||||||||||  | ||||||||| ||||| ||| |||||||||||||||||||||||||||||||||||||||||| |    
T  32717186 ccatcaggatcaacttttgagggtgaattctccgggaattcccgtcatggtcacggcacccttaaaaaatctgatggggatatctacattggtaacttcg 32717285  T
Q  135 agaacaatcttttccatggc-agggaaagcacacatggtcaaatggaacaatatatgagggtgattgggttgatg 208  Q
    |||   |||||| ||||||| | |||||| ||||||||| | ||||||||||||| |||||||||||||||||||    
T  32717286 agagtgatctttaccatggcaaaggaaagtacacatggttagatggaacaatatacgagggtgattgggttgatg 32717360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 7 - 219
Target Start/End: Original strand, 32716539 - 32716750
Alignment:
Q  7 ggacatggaaaggacggataatatatccccatcaagaacaatttttgagggtgaattctcgagaaattcccgtaatggttacgacacccttaaaaaatct 106  Q
    ||||| ||||||| ||||| ||||||||  |||| || ||| |||||||||| ||||||  || ||||||||| |||||  || ||| |||||||||||     
T  32716539 ggacagggaaagggcggatcatatatcc--atcaggagcaagttttgagggtcaattctttaggaattcccgtcatggtcgcggcactcttaaaaaatcc 32716636  T
Q  107 gatggggatatctacattggtaactttgagaacaatcttttccatggc-agggaaagcacacatggtcaaatggaacaatatatgagggtgattgggttg 205  Q
    ||||||| ||||||| |||||||||| ||||   |||||||||||||| |||||||| |||| |||| ||||||||||||||||||||||||||||||||    
T  32716637 gatgggggtatctacgttggtaacttcgagagtgatcttttccatggcaagggaaagtacacgtggttaaatggaacaatatatgagggtgattgggttg 32716736  T
Q  206 atgaacaaaggaca 219  Q
    ||| | ||||||||    
T  32716737 atggaaaaaggaca 32716750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 7 - 208
Target Start/End: Original strand, 32716746 - 32716946
Alignment:
Q  7 ggacatggaaaggacggataatatatccccatcaagaacaatttttgagggtgaattctcgagaaattcccgtaatggttacgacacccttaaaaaatct 106  Q
    ||||| ||||||| ||||| ||||||||  |||| || ||| |||||||||| ||||||  || ||||||||| ||||| ||| ||| |||||||||||     
T  32716746 ggacagggaaagggcggatcatatatcc--atcaggagcaagttttgagggtcaattctttaggaattcccgtcatggtcacggcactcttaaaaaatcc 32716843  T
Q  107 gatggggatatctacattggtaactttgagaacaatcttttccatggc-agggaaagcacacatggtcaaatggaacaatatatgagggtgattgggttg 205  Q
    ||||||| ||||||| |||||||||| ||||   |||||||||||||| | |||||| ||||||||||| ||||||||||||| || |||||||||||||    
T  32716844 gatgggggtatctacgttggtaacttcgagagtgatcttttccatggcaaaggaaagtacacatggtcacatggaacaatatacgatggtgattgggttg 32716943  T
Q  206 atg 208  Q
    |||    
T  32716944 atg 32716946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 155 - 219
Target Start/End: Original strand, 32714065 - 32714129
Alignment:
Q  155 agggaaagcacacatggtcaaatggaacaatatatgagggtgattgggttgatgaacaaaggaca 219  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||| | ||||||||    
T  32714065 agggaaagtacacatggtcaaatggaacaatatatgagggtgattgggttgatggaaaaaggaca 32714129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 155 - 219
Target Start/End: Original strand, 32716479 - 32716543
Alignment:
Q  155 agggaaagcacacatggtcaaatggaacaatatatgagggtgattgggttgatgaacaaaggaca 219  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||| | ||||||||    
T  32716479 agggaaagtacacatggtcaaatggaacaatatatgagggtgattgggttgatggaaaaaggaca 32716543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 37 - 208
Target Start/End: Original strand, 32716981 - 32717153
Alignment:
Q  37 atcaagaacaatttttgagggtgaattctcgagaaattcccgtaatggttacgacacccttaaaaaatctgatggggatatctacattggtaactttgag 136  Q
    |||| |||||| |||||||||| ||||||  || ||||||||| ||||| | | ||||||||  | |||  ||||| || ||||||||||||||||  ||    
T  32716981 atcaggaacaagttttgagggtcaattctttaggaattcccgtcatggtcaaggcacccttaccatatccaatgggcatgtctacattggtaacttcaag 32717080  T
Q  137 aacaatcttttccatggca-gggaaagcacacatggtcaaatggaacaatatatgagggtgattgggttgatg 208  Q
    |   |||||||| |||||| ||||||| |||||||| || |||||  |||||| |||||||||||||||||||    
T  32717081 agtgatcttttcaatggcaagggaaagtacacatggccagatggagaaatatacgagggtgattgggttgatg 32717153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 1 - 195
Target Start/End: Original strand, 32717361 - 32717554
Alignment:
Q  1 gaagacggacatggaaaggacggataatatatccccatcaagaacaatttttgagggtgaattctcgagaaattcccgtaatggttacgacacccttaaa 100  Q
    ||||| ||||| ||||||||||||||||||||  |||||| || ||| |||||||||||||||||| || ||||||  | ||||| |||  || | || |    
T  32717361 gaagaaggacagggaaaggacggataatatat--ccatcaggagcaagttttgagggtgaattctctaggaattcctttcatggtcacggaactcataca 32717458  T
Q  101 aaatctgatggggatatctacattggtaactttgagaacaatcttttcca-tggcagggaaagcacacatggtcaaatggaacaatatatgagggt 195  Q
    |||||  | |||||  |||||| || ||||   ||||  ||||||||||| | |||||||||| | || ||||||| |||||||||||||||||||    
T  32717459 aaatcaaacggggaagtctacagtgataacaccgagagtaatcttttccattcgcagggaaagtaaacttggtcaattggaacaatatatgagggt 32717554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 69; Significance: 4e-31; HSPs: 4)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 49 - 208
Target Start/End: Complemental strand, 14904934 - 14904774
Alignment:
Q  49 ttttgagggtgaattctcgagaaattcccgtaatggttacgacacccttaaaaaatctgatggggatatctacattggtaactttgagaacaatcttttc 148  Q
    |||||||||||||||||  | | |||| ||| ||||| |||||||||||| ||||||  | |||||| ||||||||||||||||  ||||  ||||||||    
T  14904934 ttttgagggtgaattctttaaagattctcgtcatggtcacgacacccttataaaatccaacggggatgtctacattggtaacttcaagaatgatcttttc 14904835  T
Q  149 catggc-agggaaagcacacatggtcaaatggaacaatatatgagggtgattgggttgatg 208  Q
    |||||| | |||||  |||||||||| ||||||| ||||||||||||||||||||||||||    
T  14904834 catggcaaaggaaaatacacatggtcgaatggaaaaatatatgagggtgattgggttgatg 14904774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 87 - 208
Target Start/End: Complemental strand, 14905103 - 14904981
Alignment:
Q  87 acgacacccttaaaaaatctgatggggatatctacattggtaactttgagaacaatcttttccatggca-gggaaagcacacatggtcaaatggaacaat 185  Q
    |||||||||||| || |||  | |||||| |||| |||||||||||||||||   |||||||||||||| ||||||| |||||||||||  ||||  |||    
T  14905103 acgacacccttacaagatccaacggggatctctatattggtaactttgagaatggtcttttccatggcaagggaaagtacacatggtcaggtggacaaat 14905004  T
Q  186 atatgagggtgattgggttgatg 208  Q
    |||||||||||| ||||||||||    
T  14905003 atatgagggtgactgggttgatg 14904981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 108 - 204
Target Start/End: Complemental strand, 14905289 - 14905192
Alignment:
Q  108 atggggatatctacattggtaactttgagaacaatcttttccatggc-agggaaagcacacatggtcaaatggaacaatatatgagggtgattgggtt 204  Q
    |||||||| ||||| |||||||||| ||||| ||||||||||||||| ||||||||  |||||||||| | |||  ||||||||||||||||||||||    
T  14905289 atggggatgtctacgttggtaacttcgagaataatcttttccatggcaagggaaagtgcacatggtcagagggagaaatatatgagggtgattgggtt 14905192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 13 - 206
Target Start/End: Complemental strand, 14905589 - 14905397
Alignment:
Q  13 ggaaaggacggataatatatccccatcaagaacaatttttgagggtgaattctcgagaaattcccgtaatggttacgacacccttaaaaaatctgatggg 112  Q
    ||||||| ||||| ||||||||  |||| || ||| |||||||||||||||||  || ||||||||| ||||| | | |||||||| ||||||  | |||    
T  14905589 ggaaagggcggatgatatatcc--atcaggagcaagttttgagggtgaattctttaggaattcccgtcatggtcaaggcacccttacaaaatccaacggg 14905492  T
Q  113 gatatctacattggtaactttgagaacaatcttttccatggc-agggaaagcacacatggtcaaatggaacaatatatgagggtgattgggttga 206  Q
     || ||||||||||||||||  |||    |  |||||||||| |||||||| ||||||||||| |||||   |||||||||||||| ||||||||    
T  14905491 aatctctacattggtaacttcaagagtggttctttccatggcaagggaaagtacacatggtcagatggagagatatatgagggtgactgggttga 14905397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 9)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 164 - 219
Target Start/End: Complemental strand, 34534161 - 34534106
Alignment:
Q  164 acacatggtcaaatggaacaatatatgagggtgattgggttgatgaacaaaggaca 219  Q
    ||||||||||| ||||||||||||||||||| ||||||||||||| ||||| ||||    
T  34534161 acacatggtcagatggaacaatatatgagggcgattgggttgatggacaaatgaca 34534106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 147 - 208
Target Start/End: Complemental strand, 34916742 - 34916680
Alignment:
Q  147 tccatggca-gggaaagcacacatggtcaaatggaacaatatatgagggtgattgggttgatg 208  Q
    ||||||||| ||||||| |||||||| |||||||||||||||| |||||||| ||||||||||    
T  34916742 tccatggcatgggaaagtacacatggacaaatggaacaatatacgagggtgactgggttgatg 34916680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 157 - 208
Target Start/End: Complemental strand, 34545011 - 34544960
Alignment:
Q  157 ggaaagcacacatggtcaaatggaacaatatatgagggtgattgggttgatg 208  Q
    |||||| |||||||| |||||||||||||||| |||||||| ||||||||||    
T  34545011 ggaaagtacacatggacaaatggaacaatatacgagggtgactgggttgatg 34544960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 157 - 215
Target Start/End: Complemental strand, 34549143 - 34549085
Alignment:
Q  157 ggaaagcacacatggtcaaatggaacaatatatgagggtgattgggttgatgaacaaag 215  Q
    |||||| ||||||||||||||||||||||||| |||| ||| ||||| |||||| ||||    
T  34549143 ggaaagtacacatggtcaaatggaacaatatacgaggatgaatgggtcgatgaaaaaag 34549085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 158 - 208
Target Start/End: Original strand, 39848041 - 39848091
Alignment:
Q  158 gaaagcacacatggtcaaatggaacaatatatgagggtgattgggttgatg 208  Q
    ||||| ||||||||||| ||||| ||||||||| |||||||||||||||||    
T  39848041 gaaagtacacatggtcagatggatcaatatatgtgggtgattgggttgatg 39848091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 172 - 207
Target Start/End: Original strand, 39848916 - 39848951
Alignment:
Q  172 tcaaatggaacaatatatgagggtgattgggttgat 207  Q
    ||||||||||||||||| ||||||||||||||||||    
T  39848916 tcaaatggaacaatatacgagggtgattgggttgat 39848951  T

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Target: chr8; HSP #7
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 143 - 219
Target Start/End: Complemental strand, 34539001 - 34538924
Alignment:
Q  143 cttttccatgg-cagggaaagcacacatggtcaaatggaacaatatatgagggtgattgggttgatgaacaaaggaca 219  Q
    ||||||||||| || ||||||  ||||||||  |||||||||||||| ||||| |||||||| |||| | ||||||||    
T  34539001 cttttccatggacacggaaagttcacatggtggaatggaacaatatacgagggcgattgggtggatggagaaaggaca 34538924  T

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Target: chr8; HSP #8
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 169 - 214
Target Start/End: Complemental strand, 34544723 - 34544678
Alignment:
Q  169 tggtcaaatggaacaatatatgagggtgattgggttgatgaacaaa 214  Q
    ||||||||||||||||| || ||||| ||||||||||||| |||||    
T  34544723 tggtcaaatggaacaatgtacgagggcgattgggttgatggacaaa 34544678  T

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Target: chr8; HSP #9
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 169 - 214
Target Start/End: Complemental strand, 34916098 - 34916053
Alignment:
Q  169 tggtcaaatggaacaatatatgagggtgattgggttgatgaacaaa 214  Q
    ||||||||||||||||| || ||||| ||||||||||||| |||||    
T  34916098 tggtcaaatggaacaatgtacgagggcgattgggttgatggacaaa 34916053  T

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Target: chr4 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 157 - 208
Target Start/End: Original strand, 44474143 - 44474194
Alignment:
Q  157 ggaaagcacacatggtcaaatggaacaatatatgagggtgattgggttgatg 208  Q
    |||||| ||||||||||| ||||| ||||||||||||||||||  |||||||    
T  44474143 ggaaagtacacatggtcagatggatcaatatatgagggtgattttgttgatg 44474194  T

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Target: chr3 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 164 - 208
Target Start/End: Complemental strand, 7046948 - 7046904
Alignment:
Q  164 acacatggtcaaatggaacaatatatgagggtgattgggttgatg 208  Q
    ||||||||||| ||||| ||||||||||||| |||||| ||||||    
T  7046948 acacatggtcagatggatcaatatatgagggagattggattgatg 7046904  T

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