View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF3327_low_60 (Length: 237)

Name: NF3327_low_60
Description: NF3327
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF3327_low_60
NF3327_low_60
[»] chr8 (33 HSPs)
chr8 (107-237)||(15688021-15688151)
chr8 (117-220)||(24691987-24692096)
chr8 (113-220)||(15688038-15688145)
chr8 (174-220)||(28463619-28463665)
chr8 (174-220)||(8587178-8587224)
chr8 (171-220)||(54620-54669)
chr8 (171-220)||(2890170-2890219)
chr8 (171-220)||(6552728-6552777)
chr8 (171-220)||(7785786-7785835)
chr8 (111-220)||(8587176-8587292)
chr8 (171-220)||(33289269-33289318)
chr8 (171-220)||(39571211-39571260)
chr8 (172-216)||(17006923-17006967)
chr8 (172-216)||(17570280-17570324)
chr8 (172-227)||(33057668-33057723)
chr8 (171-220)||(3304286-3304335)
chr8 (171-220)||(7012244-7012293)
chr8 (171-220)||(7805707-7805756)
chr8 (171-220)||(12343148-12343197)
chr8 (171-220)||(12763662-12763711)
chr8 (111-211)||(15888369-15888476)
chr8 (171-220)||(25601008-25601057)
chr8 (171-220)||(31654686-31654735)
chr8 (171-220)||(32211371-32211420)
chr8 (171-220)||(43199362-43199411)
chr8 (171-220)||(44498195-44498244)
chr8 (171-211)||(13578930-13578970)
chr8 (172-216)||(24692052-24692096)
chr8 (172-209)||(31758701-31758738)
chr8 (171-220)||(32114483-32114532)
chr8 (172-208)||(26026859-26026895)
chr8 (111-159)||(28463617-28463665)
chr8 (171-211)||(28999121-28999161)
[»] chr1 (26 HSPs)
chr1 (111-220)||(11897060-11897176)
chr1 (172-220)||(16448182-16448230)
chr1 (111-220)||(11897062-11897178)
chr1 (171-220)||(17556826-17556875)
chr1 (165-220)||(47777489-47777544)
chr1 (171-220)||(9981720-9981769)
chr1 (171-220)||(11796006-11796055)
chr1 (171-220)||(14984910-14984959)
chr1 (171-220)||(25694392-25694441)
chr1 (171-220)||(27159366-27159415)
chr1 (171-220)||(31842803-31842852)
chr1 (171-220)||(39401974-39402023)
chr1 (171-220)||(44668101-44668150)
chr1 (165-220)||(12483636-12483691)
chr1 (111-197)||(16448139-16448232)
chr1 (168-211)||(47588354-47588397)
chr1 (111-220)||(44955214-44955330)
chr1 (171-220)||(1050961-1051010)
chr1 (171-220)||(26471073-26471122)
chr1 (171-220)||(34042769-34042818)
chr1 (111-227)||(37552147-37552270)
chr1 (171-220)||(47216707-47216756)
chr1 (140-211)||(21537904-21537982)
chr1 (163-220)||(12062568-12062625)
chr1 (181-218)||(17556762-17556799)
chr1 (171-208)||(23278021-23278058)
[»] chr7 (26 HSPs)
chr7 (111-220)||(7269413-7269529)
chr7 (173-228)||(46877665-46877720)
chr7 (111-220)||(7482231-7482347)
chr7 (171-220)||(1738455-1738504)
chr7 (171-220)||(7240822-7240871)
chr7 (171-220)||(9268829-9268878)
chr7 (171-220)||(22285772-22285821)
chr7 (171-220)||(33418449-33418498)
chr7 (171-220)||(38441533-38441582)
chr7 (171-220)||(46840933-46840982)
chr7 (171-219)||(9575482-9575530)
chr7 (171-227)||(36016197-36016253)
chr7 (171-218)||(38063923-38063970)
chr7 (170-220)||(7269477-7269527)
chr7 (171-216)||(94330-94375)
chr7 (171-220)||(4790321-4790370)
chr7 (171-220)||(23314147-23314196)
chr7 (171-220)||(31319407-31319456)
chr7 (171-216)||(36583468-36583513)
chr7 (171-211)||(1565746-1565786)
chr7 (171-218)||(7661149-7661196)
chr7 (174-209)||(46877568-46877603)
chr7 (181-218)||(9575419-9575456)
chr7 (171-220)||(28536759-28536808)
chr7 (171-220)||(29993252-29993301)
chr7 (175-220)||(40840127-40840172)
[»] chr2 (24 HSPs)
chr2 (111-227)||(16243784-16243907)
chr2 (171-220)||(41492904-41492953)
chr2 (171-227)||(44397620-44397676)
chr2 (132-217)||(16734810-16734902)
chr2 (171-220)||(3055631-3055680)
chr2 (171-220)||(6648527-6648576)
chr2 (171-220)||(9047763-9047812)
chr2 (171-220)||(12337945-12337994)
chr2 (171-220)||(13197718-13197767)
chr2 (171-220)||(15896915-15896964)
chr2 (171-220)||(37990021-37990070)
chr2 (171-220)||(38917530-38917579)
chr2 (171-220)||(41478647-41478696)
chr2 (171-220)||(44398759-44398808)
chr2 (172-220)||(15372300-15372348)
chr2 (168-220)||(30099190-30099242)
chr2 (111-220)||(16044325-16044441)
chr2 (172-218)||(36688892-36688938)
chr2 (111-220)||(37666618-37666734)
chr2 (174-211)||(12170416-12170453)
chr2 (171-220)||(13344557-13344606)
chr2 (172-209)||(16734802-16734839)
chr2 (174-216)||(31150665-31150707)
chr2 (177-209)||(39724289-39724321)
[»] chr3 (29 HSPs)
chr3 (171-227)||(22722004-22722060)
chr3 (173-220)||(9027150-9027197)
chr3 (165-220)||(42507363-42507418)
chr3 (171-220)||(8817394-8817443)
chr3 (171-220)||(9111502-9111551)
chr3 (171-220)||(10298052-10298101)
chr3 (171-220)||(17653785-17653834)
chr3 (171-220)||(19557060-19557109)
chr3 (171-216)||(33942944-33942989)
chr3 (171-220)||(37508994-37509043)
chr3 (171-220)||(40691004-40691053)
chr3 (171-220)||(48340470-48340519)
chr3 (171-220)||(49823389-49823438)
chr3 (168-220)||(21295334-21295386)
chr3 (172-220)||(34080038-34080086)
chr3 (172-227)||(42170347-42170402)
chr3 (171-220)||(2787840-2787889)
chr3 (171-220)||(4238667-4238716)
chr3 (171-220)||(8437498-8437547)
chr3 (172-209)||(14848276-14848313)
chr3 (171-220)||(38964465-38964514)
chr3 (171-220)||(44785404-44785453)
chr3 (171-220)||(46208103-46208152)
chr3 (171-220)||(51406746-51406795)
chr3 (174-216)||(43323072-43323114)
chr3 (111-160)||(9027148-9027197)
chr3 (172-220)||(2131746-2131794)
chr3 (172-220)||(8092596-8092644)
chr3 (165-197)||(48729570-48729602)
[»] chr6 (21 HSPs)
chr6 (111-220)||(8099536-8099652)
chr6 (171-220)||(2830408-2830457)
chr6 (171-220)||(6330188-6330237)
chr6 (171-220)||(8382977-8383026)
chr6 (171-220)||(9644769-9644818)
chr6 (171-220)||(9650786-9650835)
chr6 (171-220)||(11572153-11572202)
chr6 (171-220)||(13853601-13853650)
chr6 (172-213)||(14236697-14236738)
chr6 (171-220)||(26602396-26602445)
chr6 (168-217)||(28747145-28747194)
chr6 (171-219)||(8417802-8417850)
chr6 (171-227)||(33052795-33052851)
chr6 (172-227)||(8186441-8186496)
chr6 (111-220)||(6068572-6068688)
chr6 (111-220)||(35031009-35031125)
chr6 (173-211)||(7597052-7597090)
chr6 (171-220)||(6143627-6143676)
chr6 (171-220)||(22896535-22896584)
chr6 (174-218)||(14936533-14936577)
chr6 (171-219)||(17992061-17992109)
[»] chr5 (16 HSPs)
chr5 (171-220)||(6126897-6126946)
chr5 (171-220)||(9395423-9395472)
chr5 (171-220)||(13103097-13103146)
chr5 (171-220)||(17025697-17025746)
chr5 (171-220)||(23360015-23360064)
chr5 (171-220)||(36563546-36563595)
chr5 (171-220)||(41989415-41989464)
chr5 (168-220)||(21576016-21576068)
chr5 (171-217)||(11795241-11795287)
chr5 (171-216)||(13033124-13033169)
chr5 (172-221)||(36595781-36595830)
chr5 (171-220)||(37148963-37149012)
chr5 (171-220)||(37642027-37642076)
chr5 (180-210)||(9152157-9152187)
chr5 (165-209)||(3575156-3575200)
chr5 (175-211)||(35584450-35584486)
[»] chr4 (34 HSPs)
chr4 (171-220)||(3422133-3422182)
chr4 (171-220)||(6121901-6121950)
chr4 (174-227)||(41615677-41615730)
chr4 (171-220)||(47833684-47833733)
chr4 (172-220)||(51894590-51894638)
chr4 (174-209)||(41594673-41594708)
chr4 (174-220)||(5986952-5986998)
chr4 (174-220)||(17236864-17236910)
chr4 (171-220)||(3372194-3372243)
chr4 (171-220)||(3993049-3993098)
chr4 (171-220)||(7579383-7579432)
chr4 (111-211)||(17344219-17344326)
chr4 (171-220)||(20538694-20538743)
chr4 (171-220)||(33621869-33621918)
chr4 (173-230)||(40913187-40913244)
chr4 (171-220)||(41469774-41469823)
chr4 (171-220)||(42797805-42797854)
chr4 (171-220)||(43900622-43900671)
chr4 (171-220)||(46797798-46797847)
chr4 (171-220)||(47838625-47838674)
chr4 (171-220)||(48336336-48336385)
chr4 (174-211)||(50430494-50430531)
chr4 (171-220)||(53337443-53337492)
chr4 (172-220)||(4780369-4780417)
chr4 (171-219)||(52756748-52756796)
chr4 (139-220)||(1716309-1716395)
chr4 (174-220)||(3904691-3904737)
chr4 (171-216)||(24704443-24704488)
chr4 (172-209)||(41594728-41594765)
chr4 (111-159)||(17236864-17236912)
chr4 (172-220)||(17344221-17344269)
chr4 (174-218)||(25855093-25855137)
chr4 (172-208)||(35663934-35663970)
chr4 (111-159)||(42286428-42286476)
[»] scaffold0009 (1 HSPs)
scaffold0009 (174-220)||(49581-49627)
[»] scaffold1707 (1 HSPs)
scaffold1707 (171-216)||(1408-1453)
[»] scaffold0482 (1 HSPs)
scaffold0482 (171-220)||(12933-12982)
[»] scaffold0464 (1 HSPs)
scaffold0464 (171-220)||(6139-6188)
[»] scaffold0204 (1 HSPs)
scaffold0204 (171-220)||(23858-23907)
[»] scaffold0011 (1 HSPs)
scaffold0011 (172-210)||(231377-231415)
[»] scaffold0650 (1 HSPs)
scaffold0650 (174-211)||(2-39)
[»] scaffold0339 (1 HSPs)
scaffold0339 (171-211)||(14509-14549)


Alignment Details
Target: chr8 (Bit Score: 123; Significance: 3e-63; HSPs: 33)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 107 - 237
Target Start/End: Complemental strand, 15688151 - 15688021
Alignment:
Q  107 gaaactccggtcctttttataggaaaaagtttggtcaacgaaagttgatgtatctgaattgaattagatacatcaacttttgttgacccaactttctctt 206  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||    
T  15688151 gaaactccggtcctttttataggaaaaagtttggtcaacgaaagttgatggatctgaattgaatcagatacatcaacttttgttgacccaactttctctt 15688052  T
Q  207 ataaacaggaccgggtggagttttctagagt 237  Q
    |||||||||||||||||||||||||||||||    
T  15688051 ataaacaggaccgggtggagttttctagagt 15688021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 117 - 220
Target Start/End: Complemental strand, 24692096 - 24691987
Alignment:
Q  117 tcctttttataggaaaaagtttggtcaacgaaagttgatgtatctgaattgaatt------agatacatcaacttttgttgacccaactttctcttataa 210  Q
    |||| |||||| ||||||||| ||||||| |||||||||||||||||| ||||||      ||||| |||||||||||||||||||| ||||| ||| ||    
T  24692096 tcctatttataagaaaaagttaggtcaacaaaagttgatgtatctgaactgaattttaaccagatatatcaacttttgttgacccaaatttcttttaaaa 24691997  T
Q  211 acaggaccgg 220  Q
    | ||||||||    
T  24691996 ataggaccgg 24691987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 113 - 220
Target Start/End: Original strand, 15688038 - 15688145
Alignment:
Q  113 ccggtcctttttataggaaaaagtttggtcaacgaaagttgatgtatctgaattgaatt-agatacatcaacttttgttgacccaactttctcttataaa 211  Q
    |||||||| |||||| || |||||| ||||||| |||||||||||||||| ||| |||| |||| |||||||||| ||||||| |||||| || ||||||    
T  15688038 ccggtcctgtttataagagaaagttgggtcaacaaaagttgatgtatctg-attcaattcagatccatcaactttcgttgaccaaactttttcctataaa 15688136  T
Q  212 caggaccgg 220  Q
     ||||||||    
T  15688137 aaggaccgg 15688145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 174 - 220
Target Start/End: Complemental strand, 28463665 - 28463619
Alignment:
Q  174 atacatcaacttttgttgacccaactttctcttataaacaggaccgg 220  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||    
T  28463665 atacatcaacttttgttgacccaactttctcttataaataggaccgg 28463619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 174 - 220
Target Start/End: Complemental strand, 8587224 - 8587178
Alignment:
Q  174 atacatcaacttttgttgacccaactttctcttataaacaggaccgg 220  Q
    ||||||||||||||||||||| |||||||||||||||| ||||||||    
T  8587224 atacatcaacttttgttgaccaaactttctcttataaataggaccgg 8587178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 171 - 220
Target Start/End: Complemental strand, 54669 - 54620
Alignment:
Q  171 tagatacatcaacttttgttgacccaactttctcttataaacaggaccgg 220  Q
    |||||||||||||||||||||||||||  |||||||||||| ||||||||    
T  54669 tagatacatcaacttttgttgacccaaaattctcttataaataggaccgg 54620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 171 - 220
Target Start/End: Complemental strand, 2890219 - 2890170
Alignment:
Q  171 tagatacatcaacttttgttgacccaactttctcttataaacaggaccgg 220  Q
    |||||||||||||||||||||||||||  |||||||||||| ||||||||    
T  2890219 tagatacatcaacttttgttgacccaaaattctcttataaataggaccgg 2890170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 171 - 220
Target Start/End: Original strand, 6552728 - 6552777
Alignment:
Q  171 tagatacatcaacttttgttgacccaactttctcttataaacaggaccgg 220  Q
    |||||||||||||||||||||||||||  |||||||||||| ||||||||    
T  6552728 tagatacatcaacttttgttgacccaaaattctcttataaataggaccgg 6552777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 171 - 220
Target Start/End: Complemental strand, 7785835 - 7785786
Alignment:
Q  171 tagatacatcaacttttgttgacccaactttctcttataaacaggaccgg 220  Q
    |||||||||||||||||||||||||||  |||||||||||| ||||||||    
T  7785835 tagatacatcaacttttgttgacccaaaattctcttataaataggaccgg 7785786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 111 - 220
Target Start/End: Original strand, 8587176 - 8587292
Alignment:
Q  111 ctccggtcctttttataggaaaaagtttggtcaacgaaagttgatgtat-----ctgaa--ttgaattagatacatcaacttttgttgacccaactttct 203  Q
    |||||||||| |||||| || |||||||||||||| |||||||||||||     || ||  || || ||||||||||||||||| ||||| ||| |||||    
T  8587176 ctccggtcctatttataagagaaagtttggtcaacaaaagttgatgtattttgactaaatttttaactagatacatcaacttttattgactcaagtttct 8587275  T
Q  204 cttataaacaggaccgg 220  Q
    |||||||| | ||||||    
T  8587276 cttataaataagaccgg 8587292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 171 - 220
Target Start/End: Complemental strand, 33289318 - 33289269
Alignment:
Q  171 tagatacatcaacttttgttgacccaactttctcttataaacaggaccgg 220  Q
    |||||||||||||||||||||||||||  |||||||||||| ||||||||    
T  33289318 tagatacatcaacttttgttgacccaaaattctcttataaataggaccgg 33289269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 171 - 220
Target Start/End: Complemental strand, 39571260 - 39571211
Alignment:
Q  171 tagatacatcaacttttgttgacccaactttctcttataaacaggaccgg 220  Q
    |||||||||||||||||||||||||||  |||||||||||| ||||||||    
T  39571260 tagatacatcaacttttgttgacccaaaattctcttataaataggaccgg 39571211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 172 - 216
Target Start/End: Complemental strand, 17006967 - 17006923
Alignment:
Q  172 agatacatcaacttttgttgacccaactttctcttataaacagga 216  Q
    |||| ||||||||||||||||||||||||||||||||||| ||||    
T  17006967 agatccatcaacttttgttgacccaactttctcttataaatagga 17006923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 172 - 216
Target Start/End: Original strand, 17570280 - 17570324
Alignment:
Q  172 agatacatcaacttttgttgacccaactttctcttataaacagga 216  Q
    |||| ||||||||||||||||||||||||||||||||||| ||||    
T  17570280 agatccatcaacttttgttgacccaactttctcttataaatagga 17570324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 172 - 227
Target Start/End: Original strand, 33057668 - 33057723
Alignment:
Q  172 agatacatcaacttttgttgacccaactttctcttataaacaggaccgggtggagt 227  Q
    ||||||||||| ||||||||||| |||||||||||||||| | |||||| ||||||    
T  33057668 agatacatcaatttttgttgaccaaactttctcttataaataagaccggatggagt 33057723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 171 - 220
Target Start/End: Complemental strand, 3304335 - 3304286
Alignment:
Q  171 tagatacatcaacttttgttgacccaactttctcttataaacaggaccgg 220  Q
    |||||||||||||||||||||||||||  || ||||||||| ||||||||    
T  3304335 tagatacatcaacttttgttgacccaaaattttcttataaataggaccgg 3304286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 171 - 220
Target Start/End: Original strand, 7012244 - 7012293
Alignment:
Q  171 tagatacatcaacttttgttgacccaactttctcttataaacaggaccgg 220  Q
    |||||||||||||||||||||| ||||  |||||||||||| ||||||||    
T  7012244 tagatacatcaacttttgttgatccaaaattctcttataaataggaccgg 7012293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 171 - 220
Target Start/End: Complemental strand, 7805756 - 7805707
Alignment:
Q  171 tagatacatcaacttttgttgacccaactttctcttataaacaggaccgg 220  Q
    |||||||||||||||||| ||||||||  |||||||||||| ||||||||    
T  7805756 tagatacatcaacttttgctgacccaaaattctcttataaataggaccgg 7805707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 171 - 220
Target Start/End: Complemental strand, 12343197 - 12343148
Alignment:
Q  171 tagatacatcaacttttgttgacccaactttctcttataaacaggaccgg 220  Q
    |||||||||||||||||||||||| ||  |||||||||||| ||||||||    
T  12343197 tagatacatcaacttttgttgaccaaaaattctcttataaataggaccgg 12343148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 171 - 220
Target Start/End: Complemental strand, 12763711 - 12763662
Alignment:
Q  171 tagatacatcaacttttgttgacccaactttctcttataaacaggaccgg 220  Q
    |||||||||||||||||||||||||||  || ||||||||| ||||||||    
T  12763711 tagatacatcaacttttgttgacccaaaattatcttataaataggaccgg 12763662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 111 - 211
Target Start/End: Complemental strand, 15888476 - 15888369
Alignment:
Q  111 ctccggtcctttttataggaaaaagtttggtcaacgaaagttgatgtatctgaattgaatt-------agatacatcaacttttgttgacccaactttct 203  Q
    |||||||||| |||||| || ||| || ||||||| |||||  |||||| || ||||||||       ||||||||||||||||||||||||||  ||||    
T  15888476 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggattgaatttttaactagatacatcaacttttgttgacccaaaattct 15888377  T
Q  204 cttataaa 211  Q
    ||||||||    
T  15888376 cttataaa 15888369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 171 - 220
Target Start/End: Complemental strand, 25601057 - 25601008
Alignment:
Q  171 tagatacatcaacttttgttgacccaactttctcttataaacaggaccgg 220  Q
    ||||||||| |||||||||||||||||  |||||||||||| ||||||||    
T  25601057 tagatacattaacttttgttgacccaaaattctcttataaataggaccgg 25601008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 171 - 220
Target Start/End: Original strand, 31654686 - 31654735
Alignment:
Q  171 tagatacatcaacttttgttgacccaactttctcttataaacaggaccgg 220  Q
    |||||||||||||||||||||||||||  |||| ||||||| ||||||||    
T  31654686 tagatacatcaacttttgttgacccaaaattcttttataaataggaccgg 31654735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 171 - 220
Target Start/End: Complemental strand, 32211420 - 32211371
Alignment:
Q  171 tagatacatcaacttttgttgacccaactttctcttataaacaggaccgg 220  Q
    |||||||||||| ||||||||||||||  |||||||||||| ||||||||    
T  32211420 tagatacatcaatttttgttgacccaaaattctcttataaataggaccgg 32211371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 171 - 220
Target Start/End: Complemental strand, 43199411 - 43199362
Alignment:
Q  171 tagatacatcaacttttgttgacccaactttctcttataaacaggaccgg 220  Q
    |||||||||||||||||||||||| ||  |||||||||||| ||||||||    
T  43199411 tagatacatcaacttttgttgaccaaaaattctcttataaataggaccgg 43199362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 171 - 220
Target Start/End: Complemental strand, 44498244 - 44498195
Alignment:
Q  171 tagatacatcaacttttgttgacccaactttctcttataaacaggaccgg 220  Q
    ||||||||||||||||| |||||||||  |||||||||||| ||||||||    
T  44498244 tagatacatcaacttttattgacccaaaattctcttataaataggaccgg 44498195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 171 - 211
Target Start/End: Original strand, 13578930 - 13578970
Alignment:
Q  171 tagatacatcaacttttgttgacccaactttctcttataaa 211  Q
    |||||||||||||||||||||||||||  ||||||||||||    
T  13578930 tagatacatcaacttttgttgacccaaaattctcttataaa 13578970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 172 - 216
Target Start/End: Original strand, 24692052 - 24692096
Alignment:
Q  172 agatacatcaacttttgttgacccaactttctcttataaacagga 216  Q
    ||||||||||||||||||||||| |||||| ||||||||| ||||    
T  24692052 agatacatcaacttttgttgacctaactttttcttataaatagga 24692096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 172 - 209
Target Start/End: Original strand, 31758701 - 31758738
Alignment:
Q  172 agatacatcaacttttgttgacccaactttctcttata 209  Q
    |||| |||||||||||||||||| ||||||||||||||    
T  31758701 agattcatcaacttttgttgacctaactttctcttata 31758738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 171 - 220
Target Start/End: Complemental strand, 32114532 - 32114483
Alignment:
Q  171 tagatacatcaacttttgttgacccaactttctcttataaacaggaccgg 220  Q
    |||||||||||| ||||||||||||||  || ||||||||| ||||||||    
T  32114532 tagatacatcaatttttgttgacccaaaattttcttataaataggaccgg 32114483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 172 - 208
Target Start/End: Original strand, 26026859 - 26026895
Alignment:
Q  172 agatacatcaacttttgttgacccaactttctcttat 208  Q
    ||||| ||||||||||||| |||||||||||||||||    
T  26026859 agatatatcaacttttgttaacccaactttctcttat 26026895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 111 - 159
Target Start/End: Original strand, 28463617 - 28463665
Alignment:
Q  111 ctccggtcctttttataggaaaaagtttggtcaacgaaagttgatgtat 159  Q
    |||||||||| |||||| || |||||| ||||||| |||||||||||||    
T  28463617 ctccggtcctatttataagagaaagttgggtcaacaaaagttgatgtat 28463665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 171 - 211
Target Start/End: Original strand, 28999121 - 28999161
Alignment:
Q  171 tagatacatcaacttttgttgacccaactttctcttataaa 211  Q
    |||||||||||| ||||||||||| |||||||| |||||||    
T  28999121 tagatacatcaatttttgttgaccaaactttcttttataaa 28999161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 55; Significance: 1e-22; HSPs: 26)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 111 - 220
Target Start/End: Original strand, 11897060 - 11897176
Alignment:
Q  111 ctccggtcctttttataggaaaaagtttggtcaacgaaagttgatgtatctgaattgaatta-------gatacatcaacttttgttgacccaactttct 203  Q
    |||||||||| |||||| || |||||| ||||||| |||||||||||||||||| ||||||        ||||||||||||||||||||||||| |||||    
T  11897060 ctccggtcctatttataagagaaagttaggtcaacaaaagttgatgtatctgaactgaatttttaaccggatacatcaacttttgttgacccaaatttct 11897159  T
Q  204 cttataaacaggaccgg 220  Q
    |||||||| ||||||||    
T  11897160 cttataaataggaccgg 11897176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 172 - 220
Target Start/End: Original strand, 16448182 - 16448230
Alignment:
Q  172 agatacatcaacttttgttgacccaactttctcttataaacaggaccgg 220  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||    
T  16448182 agatacatcaacttttgttgacccaactttctcttataaataggaccgg 16448230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 111 - 220
Target Start/End: Complemental strand, 11897178 - 11897062
Alignment:
Q  111 ctccggtcctttttataggaaaaagtttggtcaacgaaagttgatgtatctg------aattgaatt-agatacatcaacttttgttgacccaactttct 203  Q
    |||||||||| |||||| || ||| || ||||||| |||||||||||||| |      |||| | || ||||||||||||||||||||||| ||||||||    
T  11897178 ctccggtcctatttataagagaaatttgggtcaacaaaagttgatgtatccggttaaaaattcagttcagatacatcaacttttgttgacctaactttct 11897079  T
Q  204 cttataaacaggaccgg 220  Q
    |||||||| ||||||||    
T  11897078 cttataaataggaccgg 11897062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 171 - 220
Target Start/End: Original strand, 17556826 - 17556875
Alignment:
Q  171 tagatacatcaacttttgttgacccaactttctcttataaacaggaccgg 220  Q
    ||||||||||||||||||||||||||| ||||||||||||| ||||||||    
T  17556826 tagatacatcaacttttgttgacccaagtttctcttataaataggaccgg 17556875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 165 - 220
Target Start/End: Complemental strand, 47777544 - 47777489
Alignment:
Q  165 ttgaattagatacatcaacttttgttgacccaactttctcttataaacaggaccgg 220  Q
    ||||| |||||||||||||||||||||||||||  |||||||||||| ||||||||    
T  47777544 ttgaactagatacatcaacttttgttgacccaaaattctcttataaataggaccgg 47777489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 171 - 220
Target Start/End: Original strand, 9981720 - 9981769
Alignment:
Q  171 tagatacatcaacttttgttgacccaactttctcttataaacaggaccgg 220  Q
    |||||||||||||||||||||||||||  |||||||||||| ||||||||    
T  9981720 tagatacatcaacttttgttgacccaaaattctcttataaataggaccgg 9981769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 171 - 220
Target Start/End: Original strand, 11796006 - 11796055
Alignment:
Q  171 tagatacatcaacttttgttgacccaactttctcttataaacaggaccgg 220  Q
    |||||||||||||||||||||||||||  |||||||||||| ||||||||    
T  11796006 tagatacatcaacttttgttgacccaaaattctcttataaataggaccgg 11796055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 171 - 220
Target Start/End: Original strand, 14984910 - 14984959
Alignment:
Q  171 tagatacatcaacttttgttgacccaactttctcttataaacaggaccgg 220  Q
    |||||||||||||||||||||||||||  |||||||||||| ||||||||    
T  14984910 tagatacatcaacttttgttgacccaaaattctcttataaataggaccgg 14984959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 171 - 220
Target Start/End: Original strand, 25694392 - 25694441
Alignment:
Q  171 tagatacatcaacttttgttgacccaactttctcttataaacaggaccgg 220  Q
    |||||||||||||||||||||||||||  |||||||||||| ||||||||    
T  25694392 tagatacatcaacttttgttgacccaaaattctcttataaataggaccgg 25694441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 171 - 220
Target Start/End: Complemental strand, 27159415 - 27159366
Alignment:
Q  171 tagatacatcaacttttgttgacccaactttctcttataaacaggaccgg 220  Q
    |||||||||||||||||||||||||||  |||||||||||| ||||||||    
T  27159415 tagatacatcaacttttgttgacccaaaattctcttataaataggaccgg 27159366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 171 - 220
Target Start/End: Complemental strand, 31842852 - 31842803
Alignment:
Q  171 tagatacatcaacttttgttgacccaactttctcttataaacaggaccgg 220  Q
    |||||||||||||||||||||||||||  |||||||||||| ||||||||    
T  31842852 tagatacatcaacttttgttgacccaaaattctcttataaataggaccgg 31842803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 171 - 220
Target Start/End: Complemental strand, 39402023 - 39401974
Alignment:
Q  171 tagatacatcaacttttgttgacccaactttctcttataaacaggaccgg 220  Q
    |||||||||||||||||||||||||||  |||||||||||| ||||||||    
T  39402023 tagatacatcaacttttgttgacccaaaattctcttataaataggaccgg 39401974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 171 - 220
Target Start/End: Complemental strand, 44668150 - 44668101
Alignment:
Q  171 tagatacatcaacttttgttgacccaactttctcttataaacaggaccgg 220  Q
    |||||||||||||||||||||||||||  |||||||||||| ||||||||    
T  44668150 tagatacatcaacttttgttgacccaaaattctcttataaataggaccgg 44668101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 165 - 220
Target Start/End: Complemental strand, 12483691 - 12483636
Alignment:
Q  165 ttgaattagatacatcaacttttgttgacccaactttctcttataaacaggaccgg 220  Q
    ||||| || ||||||||||||||||||||||||  |||||||||||| ||||||||    
T  12483691 ttgaactaaatacatcaacttttgttgacccaaaattctcttataaataggaccgg 12483636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 111 - 197
Target Start/End: Complemental strand, 16448232 - 16448139
Alignment:
Q  111 ctccggtcctttttataggaaaaagtttggtcaacgaaagttgatgtatctgaattgaatt-------agatacatcaacttttgttgacccaa 197  Q
    |||||||||| |||||| || |||||| ||||||| |||||||||||||||| | ||||||       |||||||| |||||||||||||||||    
T  16448232 ctccggtcctatttataagagaaagttgggtcaacaaaagttgatgtatctggactgaattttgaaccagatacataaacttttgttgacccaa 16448139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 168 - 211
Target Start/End: Complemental strand, 47588397 - 47588354
Alignment:
Q  168 aattagatacatcaacttttgttgacccaactttctcttataaa 211  Q
    ||||||||||||||||||||||||||||||  ||||||||||||    
T  47588397 aattagatacatcaacttttgttgacccaaaattctcttataaa 47588354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 111 - 220
Target Start/End: Complemental strand, 44955330 - 44955214
Alignment:
Q  111 ctccggtcctttttataggaaaaagtttggtcaacgaaagttgatgtatctgaattgaatt-------agatacatcaacttttgttgacccaactttct 203  Q
    |||||||||| |||||| |||||| || ||||||| |||||  |||||| || | ||||||       ||||||||||||||||||||||| ||  ||||    
T  44955330 ctccggtcctatttataagaaaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacctaaaattct 44955231  T
Q  204 cttataaacaggaccgg 220  Q
    |||||||| ||||||||    
T  44955230 cttataaataggaccgg 44955214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 171 - 220
Target Start/End: Original strand, 1050961 - 1051010
Alignment:
Q  171 tagatacatcaacttttgttgacccaactttctcttataaacaggaccgg 220  Q
    |||||||||||||||| ||||||||||  |||||||||||| ||||||||    
T  1050961 tagatacatcaactttagttgacccaaaattctcttataaataggaccgg 1051010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 171 - 220
Target Start/End: Complemental strand, 26471122 - 26471073
Alignment:
Q  171 tagatacatcaacttttgttgacccaactttctcttataaacaggaccgg 220  Q
    |||||||||||||||||||||| ||||  |||||||||||| ||||||||    
T  26471122 tagatacatcaacttttgttgatccaaaattctcttataaataggaccgg 26471073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 171 - 220
Target Start/End: Original strand, 34042769 - 34042818
Alignment:
Q  171 tagatacatcaacttttgttgacccaactttctcttataaacaggaccgg 220  Q
    |||||||||||||||||||||||||||  |||||||||||| || |||||    
T  34042769 tagatacatcaacttttgttgacccaaaattctcttataaatagaaccgg 34042818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 111 - 227
Target Start/End: Original strand, 37552147 - 37552270
Alignment:
Q  111 ctccggtcctttttataggaaaaagtttggtcaacgaaagttgatgtatctgaattgaatt-------agatacatcaacttttgttgacccaactttct 203  Q
    |||||||||| |||||| || ||||||  |||||| | |||| ||||||||| | ||||||       ||||||||  | |||||||||||||| |||||    
T  37552147 ctccggtcctatttataagataaagttgagtcaacaacagttcatgtatctggactgaatttttaaccagatacattcatttttgttgacccaaatttct 37552246  T
Q  204 cttataaacaggaccgggtggagt 227  Q
    |||||||| ||||||||| |||||    
T  37552247 cttataaataggaccggggggagt 37552270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 171 - 220
Target Start/End: Complemental strand, 47216756 - 47216707
Alignment:
Q  171 tagatacatcaacttttgttgacccaactttctcttataaacaggaccgg 220  Q
    |||||||||||||||||||||||||||  |||||||||||| || |||||    
T  47216756 tagatacatcaacttttgttgacccaaaattctcttataaatagtaccgg 47216707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 140 - 211
Target Start/End: Original strand, 21537904 - 21537982
Alignment:
Q  140 gtcaacgaaagttgatgtatctgaattgaatt-------agatacatcaacttttgttgacccaactttctcttataaa 211  Q
    |||||||||||||||||||||||| |  ||||       |||||||||||||||||||||| ||| |||||||||||||    
T  21537904 gtcaacgaaagttgatgtatctgattcaaattttagttcagatacatcaacttttgttgactcaattttctcttataaa 21537982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 163 - 220
Target Start/End: Complemental strand, 12062625 - 12062568
Alignment:
Q  163 aattgaattagatacatcaacttttgttgacccaactttctcttataaacaggaccgg 220  Q
    |||||||| ||||||||||||||||||||| | || | ||| ||||||| ||||||||    
T  12062625 aattgaatcagatacatcaacttttgttgatcaaaatatcttttataaataggaccgg 12062568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 181 - 218
Target Start/End: Complemental strand, 17556799 - 17556762
Alignment:
Q  181 aacttttgttgacccaactttctcttataaacaggacc 218  Q
    |||||||||||||| |||||||||||||||| ||||||    
T  17556799 aacttttgttgacctaactttctcttataaataggacc 17556762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 171 - 208
Target Start/End: Complemental strand, 23278058 - 23278021
Alignment:
Q  171 tagatacatcaacttttgttgacccaactttctcttat 208  Q
    |||||||||||||||||||||||||||  |||||||||    
T  23278058 tagatacatcaacttttgttgacccaaaattctcttat 23278021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 47; Significance: 6e-18; HSPs: 26)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 111 - 220
Target Start/End: Complemental strand, 7269529 - 7269413
Alignment:
Q  111 ctccggtcctttttataggaaaaagtttggtcaacgaaagttgatgtatctgaattgaatt-------agatacatcaacttttgttgacccaactttct 203  Q
    |||||||| | |||||| ||||||||| ||||||| ||| ||||||||||| || ||||||       |||| |||||||||||||| ||||||||||||    
T  7269529 ctccggtcttatttataagaaaaagttgggtcaacaaaaattgatgtatctaaactgaatttttaaccagatgcatcaacttttgttaacccaactttct 7269430  T
Q  204 cttataaacaggaccgg 220  Q
    |||||||| ||||||||    
T  7269429 cttataaataggaccgg 7269413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 173 - 228
Target Start/End: Original strand, 46877665 - 46877720
Alignment:
Q  173 gatacatcaacttttgttgacccaactttctcttataaacaggaccgggtggagtt 228  Q
    ||||||| ||||||||||||||||||||||||||||| | |||||||| |||||||    
T  46877665 gatacattaacttttgttgacccaactttctcttatatataggaccggatggagtt 46877720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 111 - 220
Target Start/End: Original strand, 7482231 - 7482347
Alignment:
Q  111 ctccggtcctttttataggaaaaagtttggtcaacgaaagttgatgtatctgaattgaatt-------agatacatcaacttttgttgacccaactttct 203  Q
    |||||||||| |||||| || ||| || ||||||| |||||  |||||| |||| ||||||       ||||||||||||||||||||||||||  ||||    
T  7482231 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttgaactgaatttttaactagatacatcaacttttgttgacccaaaattct 7482330  T
Q  204 cttataaacaggaccgg 220  Q
    |||||||| ||||||||    
T  7482331 cttataaataggaccgg 7482347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 171 - 220
Target Start/End: Complemental strand, 1738504 - 1738455
Alignment:
Q  171 tagatacatcaacttttgttgacccaactttctcttataaacaggaccgg 220  Q
    |||||||||||||||||||||||||||  |||||||||||| ||||||||    
T  1738504 tagatacatcaacttttgttgacccaaaattctcttataaataggaccgg 1738455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 171 - 220
Target Start/End: Original strand, 7240822 - 7240871
Alignment:
Q  171 tagatacatcaacttttgttgacccaactttctcttataaacaggaccgg 220  Q
    |||||||||||||||||||||||||||  |||||||||||| ||||||||    
T  7240822 tagatacatcaacttttgttgacccaaaattctcttataaataggaccgg 7240871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 171 - 220
Target Start/End: Original strand, 9268829 - 9268878
Alignment:
Q  171 tagatacatcaacttttgttgacccaactttctcttataaacaggaccgg 220  Q
    |||||||||||||||||||||||||||  |||||||||||| ||||||||    
T  9268829 tagatacatcaacttttgttgacccaaaattctcttataaataggaccgg 9268878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 171 - 220
Target Start/End: Original strand, 22285772 - 22285821
Alignment:
Q  171 tagatacatcaacttttgttgacccaactttctcttataaacaggaccgg 220  Q
    |||||||||||||||||||||||||||  |||||||||||| ||||||||    
T  22285772 tagatacatcaacttttgttgacccaaaattctcttataaataggaccgg 22285821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 171 - 220
Target Start/End: Original strand, 33418449 - 33418498
Alignment:
Q  171 tagatacatcaacttttgttgacccaactttctcttataaacaggaccgg 220  Q
    |||||||||||||||||||||||||||  |||||||||||| ||||||||    
T  33418449 tagatacatcaacttttgttgacccaaaattctcttataaataggaccgg 33418498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 171 - 220
Target Start/End: Original strand, 38441533 - 38441582
Alignment:
Q  171 tagatacatcaacttttgttgacccaactttctcttataaacaggaccgg 220  Q
    |||||||||||||||||||||||||||  |||||||||||| ||||||||    
T  38441533 tagatacatcaacttttgttgacccaaaattctcttataaataggaccgg 38441582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 171 - 220
Target Start/End: Original strand, 46840933 - 46840982
Alignment:
Q  171 tagatacatcaacttttgttgacccaactttctcttataaacaggaccgg 220  Q
    |||||||||||||||||||||||||||  |||||||||||| ||||||||    
T  46840933 tagatacatcaacttttgttgacccaaaattctcttataaataggaccgg 46840982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 171 - 219
Target Start/End: Original strand, 9575482 - 9575530
Alignment:
Q  171 tagatacatcaacttttgttgacccaactttctcttataaacaggaccg 219  Q
    |||||||||||| ||||||||||| |||||||||||||||| |||||||    
T  9575482 tagatacatcaagttttgttgaccaaactttctcttataaataggaccg 9575530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 171 - 227
Target Start/End: Complemental strand, 36016253 - 36016197
Alignment:
Q  171 tagatacatcaacttttgttgacccaactttctcttataaacaggaccgggtggagt 227  Q
    |||||||||||||||||||||||||||  |||||||||||| |||||| | ||||||    
T  36016253 tagatacatcaacttttgttgacccaaaattctcttataaataggaccagatggagt 36016197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 171 - 218
Target Start/End: Complemental strand, 38063970 - 38063923
Alignment:
Q  171 tagatacatcaacttttgttgacccaactttctcttataaacaggacc 218  Q
    |||||||||||||||||||||||||||  |||||||||||| ||||||    
T  38063970 tagatacatcaacttttgttgacccaaaattctcttataaataggacc 38063923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 170 - 220
Target Start/End: Original strand, 7269477 - 7269527
Alignment:
Q  170 ttagatacatcaacttttgttgacccaactttctcttataaacaggaccgg 220  Q
    ||||||||||||| |||||||||||||||||| ||||||||| | ||||||    
T  7269477 ttagatacatcaatttttgttgacccaactttttcttataaataagaccgg 7269527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 171 - 216
Target Start/End: Complemental strand, 94375 - 94330
Alignment:
Q  171 tagatacatcaacttttgttgacccaactttctcttataaacagga 216  Q
    |||||||||||||||||||||||||||  |||||||||||| ||||    
T  94375 tagatacatcaacttttgttgacccaaaattctcttataaatagga 94330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 171 - 220
Target Start/End: Original strand, 4790321 - 4790370
Alignment:
Q  171 tagatacatcaacttttgttgacccaactttctcttataaacaggaccgg 220  Q
    ||||||||||||||||| |||||||||  |||||||||||| ||||||||    
T  4790321 tagatacatcaacttttattgacccaaaattctcttataaataggaccgg 4790370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 171 - 220
Target Start/End: Complemental strand, 23314196 - 23314147
Alignment:
Q  171 tagatacatcaacttttgttgacccaactttctcttataaacaggaccgg 220  Q
    |||||| ||||||||||||||||||||  |||||||||||| ||||||||    
T  23314196 tagatatatcaacttttgttgacccaaaattctcttataaataggaccgg 23314147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 171 - 220
Target Start/End: Complemental strand, 31319456 - 31319407
Alignment:
Q  171 tagatacatcaacttttgttgacccaactttctcttataaacaggaccgg 220  Q
    |||||||||||||||||||||||||||  |||||||||||| || |||||    
T  31319456 tagatacatcaacttttgttgacccaaaattctcttataaatagaaccgg 31319407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 171 - 216
Target Start/End: Original strand, 36583468 - 36583513
Alignment:
Q  171 tagatacatcaacttttgttgacccaactttctcttataaacagga 216  Q
    |||||||||||||||||||||||||||  |||||||||||| ||||    
T  36583468 tagatacatcaacttttgttgacccaaaattctcttataaatagga 36583513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 171 - 211
Target Start/End: Complemental strand, 1565786 - 1565746
Alignment:
Q  171 tagatacatcaacttttgttgacccaactttctcttataaa 211  Q
    |||||||||||||||||||||||||||  ||||||||||||    
T  1565786 tagatacatcaacttttgttgacccaaaattctcttataaa 1565746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 171 - 218
Target Start/End: Original strand, 7661149 - 7661196
Alignment:
Q  171 tagatacatcaacttttgttgacccaactttctcttataaacaggacc 218  Q
    ||||||||||||||||||||||||||| | |||| |||||| ||||||    
T  7661149 tagatacatcaacttttgttgacccaaatgtctcatataaataggacc 7661196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 174 - 209
Target Start/End: Complemental strand, 46877603 - 46877568
Alignment:
Q  174 atacatcaacttttgttgacccaactttctcttata 209  Q
    ||||||||||| ||||||||||||||||||||||||    
T  46877603 atacatcaactcttgttgacccaactttctcttata 46877568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 181 - 218
Target Start/End: Complemental strand, 9575456 - 9575419
Alignment:
Q  181 aacttttgttgacccaactttctcttataaacaggacc 218  Q
    ||||||||||||||||||||||||||| ||| ||||||    
T  9575456 aacttttgttgacccaactttctcttacaaataggacc 9575419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 171 - 220
Target Start/End: Complemental strand, 28536808 - 28536759
Alignment:
Q  171 tagatacatcaacttttgttgacccaactttctcttataaacaggaccgg 220  Q
    ||||||||||||||||| |||| ||||  |||||||||||| ||||||||    
T  28536808 tagatacatcaacttttattgatccaaaattctcttataaataggaccgg 28536759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 171 - 220
Target Start/End: Complemental strand, 29993301 - 29993252
Alignment:
Q  171 tagatacatcaacttttgttgacccaactttctcttataaacaggaccgg 220  Q
    |||||| || |||||||||||||||||| |||||||| ||| ||||||||    
T  29993301 tagatatattaacttttgttgacccaacattctcttacaaataggaccgg 29993252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 175 - 220
Target Start/End: Complemental strand, 40840172 - 40840127
Alignment:
Q  175 tacatcaacttttgttgacccaactttctcttataaacaggaccgg 220  Q
    |||||||||||||||||||  || ||||||||||||| ||||||||    
T  40840172 tacatcaacttttgttgacaaaaatttctcttataaataggaccgg 40840127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 24)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 111 - 227
Target Start/End: Complemental strand, 16243907 - 16243784
Alignment:
Q  111 ctccggtcctttttataggaaaaagtttggtcaacgaaagttgatgtatctgaattgaatt-------agatacatcaacttttgttgacccaactttct 203  Q
    |||||||||| |||||| |||||| || ||||||| |||||  |||||| || | ||||||       ||||||||||||||||||||||||||  ||||    
T  16243907 ctccggtcctatttataagaaaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaacttttgttgacccaaaattct 16243808  T
Q  204 cttataaacaggaccgggtggagt 227  Q
    |||||||| |||||||| ||||||    
T  16243807 cttataaataggaccggatggagt 16243784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 171 - 220
Target Start/End: Complemental strand, 41492953 - 41492904
Alignment:
Q  171 tagatacatcaacttttgttgacccaactttctcttataaacaggaccgg 220  Q
    ||||||||||||||||||||||||||| ||||||||||||| ||||||||    
T  41492953 tagatacatcaacttttgttgacccaaatttctcttataaataggaccgg 41492904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 171 - 227
Target Start/End: Original strand, 44397620 - 44397676
Alignment:
Q  171 tagatacatcaacttttgttgacccaactttctcttataaacaggaccgggtggagt 227  Q
    |||||||||||||||||||||||||||  |||||||||||| ||||||||| |||||    
T  44397620 tagatacatcaacttttgttgacccaaaattctcttataaataggaccggggggagt 44397676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 132 - 217
Target Start/End: Original strand, 16734810 - 16734902
Alignment:
Q  132 aaagtttggtcaacgaaagttgatgtatctgaattgaatt-------agatacatcaacttttgttgacccaactttctcttataaacaggac 217  Q
    |||||||||||||| |||||||||||||||| | ||||||       | ||||||||||||||||| || ||||||||||||||||| |||||    
T  16734810 aaagtttggtcaacaaaagttgatgtatctggactgaatttttaaccaaatacatcaacttttgtttactcaactttctcttataaataggac 16734902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 171 - 220
Target Start/End: Original strand, 3055631 - 3055680
Alignment:
Q  171 tagatacatcaacttttgttgacccaactttctcttataaacaggaccgg 220  Q
    |||||||||||||||||||||||||||  |||||||||||| ||||||||    
T  3055631 tagatacatcaacttttgttgacccaaaattctcttataaataggaccgg 3055680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 171 - 220
Target Start/End: Complemental strand, 6648576 - 6648527
Alignment:
Q  171 tagatacatcaacttttgttgacccaactttctcttataaacaggaccgg 220  Q
    |||||||||||||||||||||||||||  |||||||||||| ||||||||    
T  6648576 tagatacatcaacttttgttgacccaaaattctcttataaataggaccgg 6648527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 171 - 220
Target Start/End: Complemental strand, 9047812 - 9047763
Alignment:
Q  171 tagatacatcaacttttgttgacccaactttctcttataaacaggaccgg 220  Q
    |||||||||||||||||||||||||||  |||||||||||| ||||||||    
T  9047812 tagatacatcaacttttgttgacccaaaattctcttataaataggaccgg 9047763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 171 - 220
Target Start/End: Complemental strand, 12337994 - 12337945
Alignment:
Q  171 tagatacatcaacttttgttgacccaactttctcttataaacaggaccgg 220  Q
    |||||||||||||||||||||||||||  |||||||||||| ||||||||    
T  12337994 tagatacatcaacttttgttgacccaaaattctcttataaataggaccgg 12337945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 171 - 220
Target Start/End: Complemental strand, 13197767 - 13197718
Alignment:
Q  171 tagatacatcaacttttgttgacccaactttctcttataaacaggaccgg 220  Q
    |||||||||||||||||||||||||||  |||||||||||| ||||||||    
T  13197767 tagatacatcaacttttgttgacccaaaattctcttataaataggaccgg 13197718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 171 - 220
Target Start/End: Original strand, 15896915 - 15896964
Alignment:
Q  171 tagatacatcaacttttgttgacccaactttctcttataaacaggaccgg 220  Q
    |||||||||||||||||||||||||||  |||||||||||| ||||||||    
T  15896915 tagatacatcaacttttgttgacccaaaattctcttataaataggaccgg 15896964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 171 - 220
Target Start/End: Complemental strand, 37990070 - 37990021
Alignment:
Q  171 tagatacatcaacttttgttgacccaactttctcttataaacaggaccgg 220  Q
    |||||||||||||||||||||||||||  |||||||||||| ||||||||    
T  37990070 tagatacatcaacttttgttgacccaaaattctcttataaataggaccgg 37990021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 171 - 220
Target Start/End: Complemental strand, 38917579 - 38917530
Alignment:
Q  171 tagatacatcaacttttgttgacccaactttctcttataaacaggaccgg 220  Q
    |||||||||||||||||||||||||||  |||||||||||| ||||||||    
T  38917579 tagatacatcaacttttgttgacccaaaattctcttataaataggaccgg 38917530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 171 - 220
Target Start/End: Complemental strand, 41478696 - 41478647
Alignment:
Q  171 tagatacatcaacttttgttgacccaactttctcttataaacaggaccgg 220  Q
    |||||||||||||||||||||||||||  |||||||||||| ||||||||    
T  41478696 tagatacatcaacttttgttgacccaaaattctcttataaataggaccgg 41478647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 171 - 220
Target Start/End: Original strand, 44398759 - 44398808
Alignment:
Q  171 tagatacatcaacttttgttgacccaactttctcttataaacaggaccgg 220  Q
    |||||||||||||||||||||||||||  |||||||||||| ||||||||    
T  44398759 tagatacatcaacttttgttgacccaaaattctcttataaataggaccgg 44398808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 172 - 220
Target Start/End: Original strand, 15372300 - 15372348
Alignment:
Q  172 agatacatcaacttttgttgacccaactttctcttataaacaggaccgg 220  Q
    ||||||||||||||||||||||||||  |||||||||||| ||||||||    
T  15372300 agatacatcaacttttgttgacccaaaattctcttataaataggaccgg 15372348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 168 - 220
Target Start/End: Complemental strand, 30099242 - 30099190
Alignment:
Q  168 aattagatacatcaacttttgttgacccaactttctcttataaacaggaccgg 220  Q
    ||||||||||||||||||||||||||||||  |||||| ||||| ||||||||    
T  30099242 aattagatacatcaacttttgttgacccaaaattctctaataaataggaccgg 30099190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 111 - 220
Target Start/End: Complemental strand, 16044441 - 16044325
Alignment:
Q  111 ctccggtcctttttataggaaaaagtttggtcaacgaaagttgatgtatctgaattgaatt-------agatacatcaacttttgttgacccaactttct 203  Q
    |||||||||| |||||| || ||| || ||||||| |||||  |||||| |||| ||||||       ||||||||||||||| ||||||||||  ||||    
T  16044441 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttgaactgaatttttaactagatacatcaactttagttgacccaaaattct 16044342  T
Q  204 cttataaacaggaccgg 220  Q
    |||||||| ||||||||    
T  16044341 cttataaataggaccgg 16044325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 172 - 218
Target Start/End: Complemental strand, 36688938 - 36688892
Alignment:
Q  172 agatacatcaacttttgttgacccaactttctcttataaacaggacc 218  Q
    |||||||||||| |||||||||| |||||||||||||||| ||||||    
T  36688938 agatacatcaacgtttgttgaccaaactttctcttataaataggacc 36688892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 111 - 220
Target Start/End: Complemental strand, 37666734 - 37666618
Alignment:
Q  111 ctccggtcctttttataggaaaaagtttggtcaacgaaagttgatgtatctgaattgaatt-------agatacatcaacttttgttgacccaactttct 203  Q
    |||||||||| |||||| || ||| || ||||||| |||||  |||||| |||| ||||||       ||||||||||||||| ||||||||||  ||||    
T  37666734 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttgaactgaatttttaactagatacatcaactttagttgacccaaaattct 37666635  T
Q  204 cttataaacaggaccgg 220  Q
    |||||||| ||||||||    
T  37666634 cttataaataggaccgg 37666618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 174 - 211
Target Start/End: Complemental strand, 12170453 - 12170416
Alignment:
Q  174 atacatcaacttttgttgacccaactttctcttataaa 211  Q
    |||||||||||||||||||||||| |||||||||||||    
T  12170453 atacatcaacttttgttgacccaagtttctcttataaa 12170416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 171 - 220
Target Start/End: Original strand, 13344557 - 13344606
Alignment:
Q  171 tagatacatcaacttttgttgacccaactttctcttataaacaggaccgg 220  Q
    |||||||||||||||||||||| ||||  |||||||||||| ||||||||    
T  13344557 tagatacatcaacttttgttgatccaaaattctcttataaataggaccgg 13344606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 172 - 209
Target Start/End: Complemental strand, 16734839 - 16734802
Alignment:
Q  172 agatacatcaacttttgttgacccaactttctcttata 209  Q
    ||||||||||||||||||||||| ||||||||||||||    
T  16734839 agatacatcaacttttgttgaccaaactttctcttata 16734802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 174 - 216
Target Start/End: Complemental strand, 31150707 - 31150665
Alignment:
Q  174 atacatcaacttttgttgacccaactttctcttataaacagga 216  Q
    |||||| ||||||||||||| ||||||||||||||||| ||||    
T  31150707 atacataaacttttgttgacgcaactttctcttataaatagga 31150665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 177 - 209
Target Start/End: Original strand, 39724289 - 39724321
Alignment:
Q  177 catcaacttttgttgacccaactttctcttata 209  Q
    ||||||||||||||||||||||| |||||||||    
T  39724289 catcaacttttgttgacccaactgtctcttata 39724321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 29)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 171 - 227
Target Start/End: Original strand, 22722004 - 22722060
Alignment:
Q  171 tagatacatcaacttttgttgacccaactttctcttataaacaggaccgggtggagt 227  Q
    |||||||||||||||||||||||||||  |||||||||||| |||||||| ||||||    
T  22722004 tagatacatcaacttttgttgacccaaaattctcttataaataggaccggatggagt 22722060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 173 - 220
Target Start/End: Complemental strand, 9027197 - 9027150
Alignment:
Q  173 gatacatcaacttttgttgacccaactttctcttataaacaggaccgg 220  Q
    ||||||||||||||||||||||||||||| ||||||||| ||||||||    
T  9027197 gatacatcaacttttgttgacccaactttatcttataaataggaccgg 9027150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 165 - 220
Target Start/End: Complemental strand, 42507418 - 42507363
Alignment:
Q  165 ttgaattagatacatcaacttttgttgacccaactttctcttataaacaggaccgg 220  Q
    ||||| |||||||||||||||||||||||||||  |||||||||||| ||||||||    
T  42507418 ttgaactagatacatcaacttttgttgacccaaaattctcttataaataggaccgg 42507363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 171 - 220
Target Start/End: Complemental strand, 8817443 - 8817394
Alignment:
Q  171 tagatacatcaacttttgttgacccaactttctcttataaacaggaccgg 220  Q
    |||||||||||||||||||||||||||  |||||||||||| ||||||||    
T  8817443 tagatacatcaacttttgttgacccaaaattctcttataaataggaccgg 8817394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 171 - 220
Target Start/End: Complemental strand, 9111551 - 9111502
Alignment:
Q  171 tagatacatcaacttttgttgacccaactttctcttataaacaggaccgg 220  Q
    |||||||||||||||||||||||||||  |||||||||||| ||||||||    
T  9111551 tagatacatcaacttttgttgacccaaaattctcttataaataggaccgg 9111502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 171 - 220
Target Start/End: Original strand, 10298052 - 10298101
Alignment:
Q  171 tagatacatcaacttttgttgacccaactttctcttataaacaggaccgg 220  Q
    |||||||||||||||||||||||||||  |||||||||||| ||||||||    
T  10298052 tagatacatcaacttttgttgacccaaaattctcttataaataggaccgg 10298101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 171 - 220
Target Start/End: Original strand, 17653785 - 17653834
Alignment:
Q  171 tagatacatcaacttttgttgacccaactttctcttataaacaggaccgg 220  Q
    |||||||||||||||||||||||||||  |||||||||||| ||||||||    
T  17653785 tagatacatcaacttttgttgacccaaaattctcttataaataggaccgg 17653834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 171 - 220
Target Start/End: Complemental strand, 19557109 - 19557060
Alignment:
Q  171 tagatacatcaacttttgttgacccaactttctcttataaacaggaccgg 220  Q
    |||||||||||||||||||||||||||  |||||||||||| ||||||||    
T  19557109 tagatacatcaacttttgttgacccaaaattctcttataaataggaccgg 19557060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 171 - 216
Target Start/End: Complemental strand, 33942989 - 33942944
Alignment:
Q  171 tagatacatcaacttttgttgacccaactttctcttataaacagga 216  Q
    ||||||||||||||||||||||||||| ||||||||||||| ||||    
T  33942989 tagatacatcaacttttgttgacccaagtttctcttataaatagga 33942944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 171 - 220
Target Start/End: Original strand, 37508994 - 37509043
Alignment:
Q  171 tagatacatcaacttttgttgacccaactttctcttataaacaggaccgg 220  Q
    |||||||||||||||||||||||||||  |||||||||||| ||||||||    
T  37508994 tagatacatcaacttttgttgacccaaaattctcttataaataggaccgg 37509043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 171 - 220
Target Start/End: Complemental strand, 40691053 - 40691004
Alignment:
Q  171 tagatacatcaacttttgttgacccaactttctcttataaacaggaccgg 220  Q
    |||||||||||||||||||||||||||  |||||||||||| ||||||||    
T  40691053 tagatacatcaacttttgttgacccaaaattctcttataaataggaccgg 40691004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 171 - 220
Target Start/End: Original strand, 48340470 - 48340519
Alignment:
Q  171 tagatacatcaacttttgttgacccaactttctcttataaacaggaccgg 220  Q
    |||||||||||||||||||||||||||  |||||||||||| ||||||||    
T  48340470 tagatacatcaacttttgttgacccaaaattctcttataaataggaccgg 48340519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 171 - 220
Target Start/End: Complemental strand, 49823438 - 49823389
Alignment:
Q  171 tagatacatcaacttttgttgacccaactttctcttataaacaggaccgg 220  Q
    |||||||||||||||||||||||||||  |||||||||||| ||||||||    
T  49823438 tagatacatcaacttttgttgacccaaaattctcttataaataggaccgg 49823389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 168 - 220
Target Start/End: Complemental strand, 21295386 - 21295334
Alignment:
Q  168 aattagatacatcaacttttgttgacccaactttctcttataaacaggaccgg 220  Q
    ||||||||||||||||||||||||||| ||  |||||||||||| ||||||||    
T  21295386 aattagatacatcaacttttgttgacctaaaattctcttataaataggaccgg 21295334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 172 - 220
Target Start/End: Complemental strand, 34080086 - 34080038
Alignment:
Q  172 agatacatcaacttttgttgacccaactttctcttataaacaggaccgg 220  Q
    ||||||||||||||||||||||||||  |||||||||||| ||||||||    
T  34080086 agatacatcaacttttgttgacccaaaattctcttataaataggaccgg 34080038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 172 - 227
Target Start/End: Complemental strand, 42170402 - 42170347
Alignment:
Q  172 agatacatcaacttttgttgacccaactttctcttataaacaggaccgggtggagt 227  Q
    ||||||||||||||||||||||||||  |||||||||||| |||||| | ||||||    
T  42170402 agatacatcaacttttgttgacccaaaattctcttataaataggaccagatggagt 42170347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 171 - 220
Target Start/End: Complemental strand, 2787889 - 2787840
Alignment:
Q  171 tagatacatcaacttttgttgacccaactttctcttataaacaggaccgg 220  Q
    |||||||||||||||||| ||||||||  |||||||||||| ||||||||    
T  2787889 tagatacatcaacttttgctgacccaaaattctcttataaataggaccgg 2787840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 171 - 220
Target Start/End: Original strand, 4238667 - 4238716
Alignment:
Q  171 tagatacatcaacttttgttgacccaactttctcttataaacaggaccgg 220  Q
    |||||||||||||||||||||||| ||  |||||||||||| ||||||||    
T  4238667 tagatacatcaacttttgttgaccaaaaattctcttataaataggaccgg 4238716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 171 - 220
Target Start/End: Original strand, 8437498 - 8437547
Alignment:
Q  171 tagatacatcaacttttgttgacccaactttctcttataaacaggaccgg 220  Q
    ||||||||||||||||||||||| |||  |||||||||||| ||||||||    
T  8437498 tagatacatcaacttttgttgactcaaaattctcttataaataggaccgg 8437547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 172 - 209
Target Start/End: Complemental strand, 14848313 - 14848276
Alignment:
Q  172 agatacatcaacttttgttgacccaactttctcttata 209  Q
    |||||||||||||||||||||||||| |||||||||||    
T  14848313 agatacatcaacttttgttgacccaattttctcttata 14848276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 171 - 220
Target Start/End: Original strand, 38964465 - 38964514
Alignment:
Q  171 tagatacatcaacttttgttgacccaactttctcttataaacaggaccgg 220  Q
    |||||||||||||||||||||||| ||  |||||||||||| ||||||||    
T  38964465 tagatacatcaacttttgttgaccaaaaattctcttataaataggaccgg 38964514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 171 - 220
Target Start/End: Complemental strand, 44785453 - 44785404
Alignment:
Q  171 tagatacatcaacttttgttgacccaactttctcttataaacaggaccgg 220  Q
    |||||||||||||||||||||||||||  |||||||||||| || |||||    
T  44785453 tagatacatcaacttttgttgacccaaaattctcttataaatagaaccgg 44785404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 171 - 220
Target Start/End: Original strand, 46208103 - 46208152
Alignment:
Q  171 tagatacatcaacttttgttgacccaactttctcttataaacaggaccgg 220  Q
    |||||||||||||||||||||||| ||  |||||||||||| ||||||||    
T  46208103 tagatacatcaacttttgttgacctaaaattctcttataaataggaccgg 46208152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 171 - 220
Target Start/End: Original strand, 51406746 - 51406795
Alignment:
Q  171 tagatacatcaacttttgttgacccaactttctcttataaacaggaccgg 220  Q
    |||||||||||| ||||||||||||||  |||||||||||| ||||||||    
T  51406746 tagatacatcaatttttgttgacccaaaattctcttataaataggaccgg 51406795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 174 - 216
Target Start/End: Complemental strand, 43323114 - 43323072
Alignment:
Q  174 atacatcaacttttgttgacccaactttctcttataaacagga 216  Q
    |||||||||||||||||||||||| ||| ||||||||| ||||    
T  43323114 atacatcaacttttgttgacccaattttttcttataaatagga 43323072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 111 - 160
Target Start/End: Original strand, 9027148 - 9027197
Alignment:
Q  111 ctccggtcctttttataggaaaaagtttggtcaacgaaagttgatgtatc 160  Q
    |||||||||| |||||| || |||||| ||||||| ||||||||||||||    
T  9027148 ctccggtcctatttataagataaagttgggtcaacaaaagttgatgtatc 9027197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 172 - 220
Target Start/End: Original strand, 2131746 - 2131794
Alignment:
Q  172 agatacatcaacttttgttgacccaactttctcttataaacaggaccgg 220  Q
    |||||||||||||||||||||||||| | ||||| ||||  ||||||||    
T  2131746 agatacatcaacttttgttgacccaaatgtctctcataagtaggaccgg 2131794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 172 - 220
Target Start/End: Complemental strand, 8092644 - 8092596
Alignment:
Q  172 agatacatcaacttttgttgacccaactttctcttataaacaggaccgg 220  Q
    ||||||||||||||| |||||  ||| ||||||||||||| ||||||||    
T  8092644 agatacatcaactttagttgattcaattttctcttataaataggaccgg 8092596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 165 - 197
Target Start/End: Complemental strand, 48729602 - 48729570
Alignment:
Q  165 ttgaattagatacatcaacttttgttgacccaa 197  Q
    |||||||||||| ||||||||||||||||||||    
T  48729602 ttgaattagatatatcaacttttgttgacccaa 48729570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 21)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 111 - 220
Target Start/End: Original strand, 8099536 - 8099652
Alignment:
Q  111 ctccggtcctttttataggaaaaagtttggtcaacgaaagttgatgtatctgaattgaatt-------agatacatcaacttttgttgacccaactttct 203  Q
    |||||||||| |||||| || ||| || ||||||| |||||  |||||| || ||||||||       ||||||||||||||||||||||||||  ||||    
T  8099536 ctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggattgaatttttaactagatacatcaacttttgttgacccaaaattct 8099635  T
Q  204 cttataaacaggaccgg 220  Q
    |||||||| ||||||||    
T  8099636 cttataaataggaccgg 8099652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 171 - 220
Target Start/End: Original strand, 2830408 - 2830457
Alignment:
Q  171 tagatacatcaacttttgttgacccaactttctcttataaacaggaccgg 220  Q
    |||||||||||||||||||||||||||  |||||||||||| ||||||||    
T  2830408 tagatacatcaacttttgttgacccaaaattctcttataaataggaccgg 2830457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 171 - 220
Target Start/End: Original strand, 6330188 - 6330237
Alignment:
Q  171 tagatacatcaacttttgttgacccaactttctcttataaacaggaccgg 220  Q
    |||||||||||||||||||||||||||  |||||||||||| ||||||||    
T  6330188 tagatacatcaacttttgttgacccaaaattctcttataaataggaccgg 6330237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 171 - 220
Target Start/End: Complemental strand, 8383026 - 8382977
Alignment:
Q  171 tagatacatcaacttttgttgacccaactttctcttataaacaggaccgg 220  Q
    |||||||||||||||||||||||||||  |||||||||||| ||||||||    
T  8383026 tagatacatcaacttttgttgacccaaaattctcttataaataggaccgg 8382977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 171 - 220
Target Start/End: Original strand, 9644769 - 9644818
Alignment:
Q  171 tagatacatcaacttttgttgacccaactttctcttataaacaggaccgg 220  Q
    |||||||||||||||||||||||||||  |||||||||||| ||||||||    
T  9644769 tagatacatcaacttttgttgacccaaaattctcttataaataggaccgg 9644818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 171 - 220
Target Start/End: Original strand, 9650786 - 9650835
Alignment:
Q  171 tagatacatcaacttttgttgacccaactttctcttataaacaggaccgg 220  Q
    |||||||||||||||||||||||||||  |||||||||||| ||||||||    
T  9650786 tagatacatcaacttttgttgacccaaaattctcttataaataggaccgg 9650835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 171 - 220
Target Start/End: Complemental strand, 11572202 - 11572153
Alignment:
Q  171 tagatacatcaacttttgttgacccaactttctcttataaacaggaccgg 220  Q
    |||||||||||||||||||||||||||  |||||||||||| ||||||||    
T  11572202 tagatacatcaacttttgttgacccaaaattctcttataaataggaccgg 11572153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 171 - 220
Target Start/End: Complemental strand, 13853650 - 13853601
Alignment:
Q  171 tagatacatcaacttttgttgacccaactttctcttataaacaggaccgg 220  Q
    |||||||||||||||||||||||||||  |||||||||||| ||||||||    
T  13853650 tagatacatcaacttttgttgacccaaaattctcttataaataggaccgg 13853601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 172 - 213
Target Start/End: Original strand, 14236697 - 14236738
Alignment:
Q  172 agatacatcaacttttgttgacccaactttctcttataaaca 213  Q
    |||||||||||||||||||||| |||||||||||||||||||    
T  14236697 agatacatcaacttttgttgactcaactttctcttataaaca 14236738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 171 - 220
Target Start/End: Original strand, 26602396 - 26602445
Alignment:
Q  171 tagatacatcaacttttgttgacccaactttctcttataaacaggaccgg 220  Q
    |||||||||||||||||||||||||||  |||||||||||| ||||||||    
T  26602396 tagatacatcaacttttgttgacccaaaattctcttataaataggaccgg 26602445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 168 - 217
Target Start/End: Complemental strand, 28747194 - 28747145
Alignment:
Q  168 aattagatacatcaacttttgttgacccaactttctcttataaacaggac 217  Q
    ||||||||||||||||||||||||||||||  |||||||||||| |||||    
T  28747194 aattagatacatcaacttttgttgacccaaaattctcttataaataggac 28747145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 171 - 219
Target Start/End: Complemental strand, 8417850 - 8417802
Alignment:
Q  171 tagatacatcaacttttgttgacccaactttctcttataaacaggaccg 219  Q
    |||||||||||||||||||||||||||  |||||||||||| |||||||    
T  8417850 tagatacatcaacttttgttgacccaaaattctcttataaataggaccg 8417802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 171 - 227
Target Start/End: Complemental strand, 33052851 - 33052795
Alignment:
Q  171 tagatacatcaacttttgttgacccaactttctcttataaacaggaccgggtggagt 227  Q
    ||||||||||||||||| |||||||||  |||||||||||| |||||||| ||||||    
T  33052851 tagatacatcaacttttattgacccaaaattctcttataaataggaccggatggagt 33052795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 172 - 227
Target Start/End: Original strand, 8186441 - 8186496
Alignment:
Q  172 agatacatcaacttttgttgacccaactttctcttataaacaggaccgggtggagt 227  Q
    ||||||||||||||||||||| |||| ||||| ||||||| ||||||||| |||||    
T  8186441 agatacatcaacttttgttgatccaaatttcttttataaataggaccggggggagt 8186496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 111 - 220
Target Start/End: Original strand, 6068572 - 6068688
Alignment:
Q  111 ctccggtcctttttataggaaaaagtttggtcaacgaaagttgatgtatctgaattgaatt-------agatacatcaacttttgttgacccaactttct 203  Q
    |||||||||| |||||| |||||| || ||||||  |||||  |||||| || ||||||||       |||||||||||||||||||||| |||  ||||    
T  6068572 ctccggtcctatttataagaaaaatttaggtcaataaaagtgaatgtatttggattgaatttttaactagatacatcaacttttgttgactcaaaattct 6068671  T
Q  204 cttataaacaggaccgg 220  Q
    |||||||| ||||||||    
T  6068672 cttataaataggaccgg 6068688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 111 - 220
Target Start/End: Complemental strand, 35031125 - 35031009
Alignment:
Q  111 ctccggtcctttttataggaaaaagtttggtcaacgaaagttgatgtatctgaattgaatt-------agatacatcaacttttgttgacccaactttct 203  Q
    |||||||||| |||||| |||||| || ||||||| |||||  |||||| || | ||||||       ||||||||||| ||||||||||||||  ||||    
T  35031125 ctccggtcctatttataagaaaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatcaatttttgttgacccaaaattct 35031026  T
Q  204 cttataaacaggaccgg 220  Q
    |||||||| ||||||||    
T  35031025 cttataaataggaccgg 35031009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 173 - 211
Target Start/End: Original strand, 7597052 - 7597090
Alignment:
Q  173 gatacatcaacttttgttgacccaactttctcttataaa 211  Q
    |||||||||||||||||| || |||||||||||||||||    
T  7597052 gatacatcaacttttgttaacacaactttctcttataaa 7597090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 171 - 220
Target Start/End: Original strand, 6143627 - 6143676
Alignment:
Q  171 tagatacatcaacttttgttgacccaactttctcttataaacaggaccgg 220  Q
    ||||||||||||||||||||| |||||  |||||||||||| || |||||    
T  6143627 tagatacatcaacttttgttgtcccaaaattctcttataaatagaaccgg 6143676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 171 - 220
Target Start/End: Original strand, 22896535 - 22896584
Alignment:
Q  171 tagatacatcaacttttgttgacccaactttctcttataaacaggaccgg 220  Q
    |||||||||||||||||||||||  ||  |||||||||||| ||||||||    
T  22896535 tagatacatcaacttttgttgacaaaaaattctcttataaataggaccgg 22896584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 174 - 218
Target Start/End: Original strand, 14936533 - 14936577
Alignment:
Q  174 atacatcaacttttgttgacccaactttctcttataaacaggacc 218  Q
    ||||||||||| |||||||||||| | ||||||||||| ||||||    
T  14936533 atacatcaactattgttgacccaaatatctcttataaataggacc 14936577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 171 - 219
Target Start/End: Original strand, 17992061 - 17992109
Alignment:
Q  171 tagatacatcaacttttgttgacccaactttctcttataaacaggaccg 219  Q
    |||||||||| | ||||||||||||||  |||||||||||| |||||||    
T  17992061 tagatacatcgatttttgttgacccaaaattctcttataaataggaccg 17992109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 38; Significance: 0.000000000001; HSPs: 16)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 171 - 220
Target Start/End: Original strand, 6126897 - 6126946
Alignment:
Q  171 tagatacatcaacttttgttgacccaactttctcttataaacaggaccgg 220  Q
    |||||||||||||||||||||||||||  |||||||||||| ||||||||    
T  6126897 tagatacatcaacttttgttgacccaaaattctcttataaataggaccgg 6126946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 171 - 220
Target Start/End: Original strand, 9395423 - 9395472
Alignment:
Q  171 tagatacatcaacttttgttgacccaactttctcttataaacaggaccgg 220  Q
    |||||||||||||||||||||||||||  |||||||||||| ||||||||    
T  9395423 tagatacatcaacttttgttgacccaaaattctcttataaataggaccgg 9395472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 171 - 220
Target Start/End: Original strand, 13103097 - 13103146
Alignment:
Q  171 tagatacatcaacttttgttgacccaactttctcttataaacaggaccgg 220  Q
    |||||||||||||||||||||||||||  |||||||||||| ||||||||    
T  13103097 tagatacatcaacttttgttgacccaaaattctcttataaataggaccgg 13103146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 171 - 220
Target Start/End: Original strand, 17025697 - 17025746
Alignment:
Q  171 tagatacatcaacttttgttgacccaactttctcttataaacaggaccgg 220  Q
    |||||||||||||||||||||||||||  |||||||||||| ||||||||    
T  17025697 tagatacatcaacttttgttgacccaaaattctcttataaataggaccgg 17025746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 171 - 220
Target Start/End: Original strand, 23360015 - 23360064
Alignment:
Q  171 tagatacatcaacttttgttgacccaactttctcttataaacaggaccgg 220  Q
    |||||||||||||||||||||||||||  |||||||||||| ||||||||    
T  23360015 tagatacatcaacttttgttgacccaaaattctcttataaataggaccgg 23360064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 171 - 220
Target Start/End: Complemental strand, 36563595 - 36563546
Alignment:
Q  171 tagatacatcaacttttgttgacccaactttctcttataaacaggaccgg 220  Q
    |||||||||||||||||||||||||||  |||||||||||| ||||||||    
T  36563595 tagatacatcaacttttgttgacccaaaattctcttataaataggaccgg 36563546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 171 - 220
Target Start/End: Complemental strand, 41989464 - 41989415
Alignment:
Q  171 tagatacatcaacttttgttgacccaactttctcttataaacaggaccgg 220  Q
    |||||||||||||||||||||||||||  |||||||||||| ||||||||    
T  41989464 tagatacatcaacttttgttgacccaaaattctcttataaataggaccgg 41989415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 168 - 220
Target Start/End: Original strand, 21576016 - 21576068
Alignment:
Q  168 aattagatacatcaacttttgttgacccaactttctcttataaacaggaccgg 220  Q
    ||||||||||||||||||||||||| ||||  |||||||||||| ||||||||    
T  21576016 aattagatacatcaacttttgttgatccaaaattctcttataaataggaccgg 21576068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 171 - 217
Target Start/End: Original strand, 11795241 - 11795287
Alignment:
Q  171 tagatacatcaacttttgttgacccaactttctcttataaacaggac 217  Q
    |||||||||||||||||||||||||||  |||||||||||| |||||    
T  11795241 tagatacatcaacttttgttgacccaaaattctcttataaataggac 11795287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 171 - 216
Target Start/End: Original strand, 13033124 - 13033169
Alignment:
Q  171 tagatacatcaacttttgttgacccaactttctcttataaacagga 216  Q
    |||||||||||||||||||||||||||  |||||||||||| ||||    
T  13033124 tagatacatcaacttttgttgacccaaaattctcttataaatagga 13033169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 172 - 221
Target Start/End: Complemental strand, 36595830 - 36595781
Alignment:
Q  172 agatacatcaacttttgttgacccaactttctcttataaacaggaccggg 221  Q
    ||||||||||| ||||||||||| |||||||||||||||| | |||||||    
T  36595830 agatacatcaatttttgttgacctaactttctcttataaataagaccggg 36595781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 171 - 220
Target Start/End: Complemental strand, 37149012 - 37148963
Alignment:
Q  171 tagatacatcaacttttgttgacccaactttctcttataaacaggaccgg 220  Q
    |||||||||||||||||||||||||||  |||| ||||||| ||||||||    
T  37149012 tagatacatcaacttttgttgacccaaaattctattataaataggaccgg 37148963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 171 - 220
Target Start/End: Original strand, 37642027 - 37642076
Alignment:
Q  171 tagatacatcaacttttgttgacccaactttctcttataaacaggaccgg 220  Q
    ||||||||||||||||| |||||||||  |||||||||||| ||||||||    
T  37642027 tagatacatcaacttttattgacccaaaattctcttataaataggaccgg 37642076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 180 - 210
Target Start/End: Original strand, 9152157 - 9152187
Alignment:
Q  180 caacttttgttgacccaactttctcttataa 210  Q
    |||||||||||||||||||||||||||||||    
T  9152157 caacttttgttgacccaactttctcttataa 9152187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 165 - 209
Target Start/End: Complemental strand, 3575200 - 3575156
Alignment:
Q  165 ttgaattagatacatcaacttttgttgacccaactttctcttata 209  Q
    |||||| ||| |||||||||||||||||| ||||||| |||||||    
T  3575200 ttgaatcagacacatcaacttttgttgactcaactttttcttata 3575156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 175 - 211
Target Start/End: Original strand, 35584450 - 35584486
Alignment:
Q  175 tacatcaacttttgttgacccaactttctcttataaa 211  Q
    ||||||||||||||||||| ||| |||||||||||||    
T  35584450 tacatcaacttttgttgactcaattttctcttataaa 35584486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 38; Significance: 0.000000000001; HSPs: 34)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 171 - 220
Target Start/End: Original strand, 3422133 - 3422182
Alignment:
Q  171 tagatacatcaacttttgttgacccaactttctcttataaacaggaccgg 220  Q
    |||||||||||||||||||||||||||  |||||||||||| ||||||||    
T  3422133 tagatacatcaacttttgttgacccaaaattctcttataaataggaccgg 3422182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 171 - 220
Target Start/End: Complemental strand, 6121950 - 6121901
Alignment:
Q  171 tagatacatcaacttttgttgacccaactttctcttataaacaggaccgg 220  Q
    |||||||||||||||||||||||||||  |||||||||||| ||||||||    
T  6121950 tagatacatcaacttttgttgacccaaaattctcttataaataggaccgg 6121901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 174 - 227
Target Start/End: Complemental strand, 41615730 - 41615677
Alignment:
Q  174 atacatcaacttttgttgacccaactttctcttataaacaggaccgggtggagt 227  Q
    ||||||||||||||||||| |||| ||||||||||||| |||||||| ||||||    
T  41615730 atacatcaacttttgttgatccaattttctcttataaataggaccggatggagt 41615677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 171 - 220
Target Start/End: Original strand, 47833684 - 47833733
Alignment:
Q  171 tagatacatcaacttttgttgacccaactttctcttataaacaggaccgg 220  Q
    |||||||||||||||||||||||||||  |||||||||||| ||||||||    
T  47833684 tagatacatcaacttttgttgacccaaaattctcttataaataggaccgg 47833733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 172 - 220
Target Start/End: Complemental strand, 51894638 - 51894590
Alignment:
Q  172 agatacatcaacttttgttgacccaactttctcttataaacaggaccgg 220  Q
    ||||||||||||||||||||||||||  |||||||||||| ||||||||    
T  51894638 agatacatcaacttttgttgacccaaaattctcttataaataggaccgg 51894590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 174 - 209
Target Start/End: Complemental strand, 41594708 - 41594673
Alignment:
Q  174 atacatcaacttttgttgacccaactttctcttata 209  Q
    ||||||||||||||||||||||||||||||||||||    
T  41594708 atacatcaacttttgttgacccaactttctcttata 41594673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 174 - 220
Target Start/End: Original strand, 5986952 - 5986998
Alignment:
Q  174 atacatcaacttttgttgacccaactttctcttataaacaggaccgg 220  Q
    ||||||||||||||||||||||||  |||||||||||| ||||||||    
T  5986952 atacatcaacttttgttgacccaaaattctcttataaataggaccgg 5986998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 174 - 220
Target Start/End: Original strand, 17236864 - 17236910
Alignment:
Q  174 atacatcaacttttgttgacccaactttctcttataaacaggaccgg 220  Q
    |||||||||||||||||||||||| ||| ||||||||| ||||||||    
T  17236864 atacatcaacttttgttgacccaaatttttcttataaataggaccgg 17236910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 171 - 220
Target Start/End: Original strand, 3372194 - 3372243
Alignment:
Q  171 tagatacatcaacttttgttgacccaactttctcttataaacaggaccgg 220  Q
    |||||||||||||||||||||||||||  || ||||||||| ||||||||    
T  3372194 tagatacatcaacttttgttgacccaaaattatcttataaataggaccgg 3372243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 171 - 220
Target Start/End: Original strand, 3993049 - 3993098
Alignment:
Q  171 tagatacatcaacttttgttgacccaactttctcttataaacaggaccgg 220  Q
    |||||||||||||||||||||||||||  |||||||||||| | ||||||    
T  3993049 tagatacatcaacttttgttgacccaaaattctcttataaataagaccgg 3993098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 171 - 220
Target Start/End: Original strand, 7579383 - 7579432
Alignment:
Q  171 tagatacatcaacttttgttgacccaactttctcttataaacaggaccgg 220  Q
    |||||||||||||||||||||||||||  |||||||||||| || |||||    
T  7579383 tagatacatcaacttttgttgacccaaaattctcttataaatagaaccgg 7579432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 111 - 211
Target Start/End: Original strand, 17344219 - 17344326
Alignment:
Q  111 ctccggtcctttttataggaaaaagtttggtcaacgaaagttgatgtatctgaattgaatta-------gatacatcaacttttgttgacccaactttct 203  Q
    ||||||| || |||||| || ||||||   ||||| |||||||||||||||||| ||||||        |||||||||||||||||||| |||| |||||    
T  17344219 ctccggttctatttataagagaaagttaaatcaacaaaagttgatgtatctgaactgaatttttaatcggatacatcaacttttgttgatccaaatttct 17344318  T
Q  204 cttataaa 211  Q
    ||||||||    
T  17344319 cttataaa 17344326  T

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Target: chr4; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 171 - 220
Target Start/End: Complemental strand, 20538743 - 20538694
Alignment:
Q  171 tagatacatcaacttttgttgacccaactttctcttataaacaggaccgg 220  Q
    |||||||||||| ||||||||||||||  |||||||||||| ||||||||    
T  20538743 tagatacatcaaattttgttgacccaaaattctcttataaataggaccgg 20538694  T

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Target: chr4; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 171 - 220
Target Start/End: Original strand, 33621869 - 33621918
Alignment:
Q  171 tagatacatcaacttttgttgacccaactttctcttataaacaggaccgg 220  Q
    |||||||||||||||||||||||||||  || ||||||||| ||||||||    
T  33621869 tagatacatcaacttttgttgacccaaaattatcttataaataggaccgg 33621918  T

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Target: chr4; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 173 - 230
Target Start/End: Complemental strand, 40913244 - 40913187
Alignment:
Q  173 gatacatcaacttttgttgacccaactttctcttataaacaggaccgggtggagtttt 230  Q
    |||| ||||||||||||||| |||| ||||||||||||| ||||||||  ||||||||    
T  40913244 gatatatcaacttttgttgatccaaatttctcttataaataggaccggagggagtttt 40913187  T

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Target: chr4; HSP #16
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 171 - 220
Target Start/End: Complemental strand, 41469823 - 41469774
Alignment:
Q  171 tagatacatcaacttttgttgacccaactttctcttataaacaggaccgg 220  Q
    |||||||||||||||||||||||| ||  |||||||||||| ||||||||    
T  41469823 tagatacatcaacttttgttgaccaaaaattctcttataaataggaccgg 41469774  T

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Target: chr4; HSP #17
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 171 - 220
Target Start/End: Original strand, 42797805 - 42797854
Alignment:
Q  171 tagatacatcaacttttgttgacccaactttctcttataaacaggaccgg 220  Q
    |||||||||||||||||||||||| ||  |||||||||||| ||||||||    
T  42797805 tagatacatcaacttttgttgacctaaaattctcttataaataggaccgg 42797854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 171 - 220
Target Start/End: Original strand, 43900622 - 43900671
Alignment:
Q  171 tagatacatcaacttttgttgacccaactttctcttataaacaggaccgg 220  Q
    |||||||||||||||||||| ||||||  |||||||||||| ||||||||    
T  43900622 tagatacatcaacttttgttaacccaaaattctcttataaataggaccgg 43900671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 171 - 220
Target Start/End: Original strand, 46797798 - 46797847
Alignment:
Q  171 tagatacatcaacttttgttgacccaactttctcttataaacaggaccgg 220  Q
    |||||| ||||||||||||||||||||  |||||||||||| ||||||||    
T  46797798 tagatatatcaacttttgttgacccaaaattctcttataaataggaccgg 46797847  T

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Target: chr4; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 171 - 220
Target Start/End: Complemental strand, 47838674 - 47838625
Alignment:
Q  171 tagatacatcaacttttgttgacccaactttctcttataaacaggaccgg 220  Q
    |||||||||||||||||||||||| ||  |||||||||||| ||||||||    
T  47838674 tagatacatcaacttttgttgaccaaaaattctcttataaataggaccgg 47838625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 171 - 220
Target Start/End: Original strand, 48336336 - 48336385
Alignment:
Q  171 tagatacatcaacttttgttgacccaactttctcttataaacaggaccgg 220  Q
    |||||||||||||||||||||||||||  || ||||||||| ||||||||    
T  48336336 tagatacatcaacttttgttgacccaaaattttcttataaataggaccgg 48336385  T

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Target: chr4; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 174 - 211
Target Start/End: Original strand, 50430494 - 50430531
Alignment:
Q  174 atacatcaacttttgttgacccaactttctcttataaa 211  Q
    ||||||||||||||||||||||||||| ||||||||||    
T  50430494 atacatcaacttttgttgacccaacttgctcttataaa 50430531  T

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Target: chr4; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 171 - 220
Target Start/End: Original strand, 53337443 - 53337492
Alignment:
Q  171 tagatacatcaacttttgttgacccaactttctcttataaacaggaccgg 220  Q
    ||||||||||||||||| |||||||||  |||||||||||| ||||||||    
T  53337443 tagatacatcaacttttattgacccaaaattctcttataaataggaccgg 53337492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 172 - 220
Target Start/End: Original strand, 4780369 - 4780417
Alignment:
Q  172 agatacatcaacttttgttgacccaactttctcttataaacaggaccgg 220  Q
    |||||||| |||||||||||||| || ||||||||||||| ||||||||    
T  4780369 agatacattaacttttgttgaccaaaatttctcttataaataggaccgg 4780417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 171 - 219
Target Start/End: Original strand, 52756748 - 52756796
Alignment:
Q  171 tagatacatcaacttttgttgacccaactttctcttataaacaggaccg 219  Q
    |||||||||||||||||||||||||||  |||| ||||||| |||||||    
T  52756748 tagatacatcaacttttgttgacccaaaattcttttataaataggaccg 52756796  T

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Target: chr4; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 139 - 220
Target Start/End: Complemental strand, 1716395 - 1716309
Alignment:
Q  139 ggtcaacgaaagttgatgtatctg-----aattgaattagatacatcaacttttgttgacccaactttctcttataaacaggaccgg 220  Q
    ||||||| |||||||||| |||||     ||||| || ||||||||||||||||||||||| || | ||||||||||| | ||||||    
T  1716395 ggtcaaccaaagttgatgcatctggttaaaattggatcagatacatcaacttttgttgaccaaattatctcttataaataagaccgg 1716309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 174 - 220
Target Start/End: Complemental strand, 3904737 - 3904691
Alignment:
Q  174 atacatcaacttttgttgacccaactttctcttataaacaggaccgg 220  Q
    ||||||||| ||||||||||||||  |||||||||||| ||||||||    
T  3904737 atacatcaatttttgttgacccaaaattctcttataaataggaccgg 3904691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 171 - 216
Target Start/End: Original strand, 24704443 - 24704488
Alignment:
Q  171 tagatacatcaacttttgttgacccaactttctcttataaacagga 216  Q
    ||||||||| |||||||||||||||||  |||||||||||| ||||    
T  24704443 tagatacattaacttttgttgacccaaaattctcttataaatagga 24704488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 172 - 209
Target Start/End: Original strand, 41594728 - 41594765
Alignment:
Q  172 agatacatcaacttttgttgacccaactttctcttata 209  Q
    ||||||||||||||  ||||||||||||||||||||||    
T  41594728 agatacatcaacttaagttgacccaactttctcttata 41594765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 111 - 159
Target Start/End: Complemental strand, 17236912 - 17236864
Alignment:
Q  111 ctccggtcctttttataggaaaaagtttggtcaacgaaagttgatgtat 159  Q
    |||||||||| |||||| |||||| || ||||||| |||||||||||||    
T  17236912 ctccggtcctatttataagaaaaatttgggtcaacaaaagttgatgtat 17236864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 172 - 220
Target Start/End: Complemental strand, 17344269 - 17344221
Alignment:
Q  172 agatacatcaacttttgttgacccaactttctcttataaacaggaccgg 220  Q
    |||||||||||||||||||||   |||||||||||||||| || |||||    
T  17344269 agatacatcaacttttgttgatttaactttctcttataaatagaaccgg 17344221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 174 - 218
Target Start/End: Complemental strand, 25855137 - 25855093
Alignment:
Q  174 atacatcaacttttgttgacccaactttctcttataaacaggacc 218  Q
    |||||| ||||||||||||| ||||||||||| ||||| ||||||    
T  25855137 atacattaacttttgttgactcaactttctctcataaataggacc 25855093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 172 - 208
Target Start/End: Complemental strand, 35663970 - 35663934
Alignment:
Q  172 agatacatcaacttttgttgacccaactttctcttat 208  Q
    ||||||||||| ||||||| |||||||||||||||||    
T  35663970 agatacatcaatttttgtttacccaactttctcttat 35663934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 111 - 159
Target Start/End: Complemental strand, 42286476 - 42286428
Alignment:
Q  111 ctccggtcctttttataggaaaaagtttggtcaacgaaagttgatgtat 159  Q
    ||||||||||||||||| |||| |  ||||||||| |||||||||||||    
T  42286476 ctccggtcctttttataagaaacaaattggtcaacaaaagttgatgtat 42286428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 35; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 174 - 220
Target Start/End: Original strand, 49581 - 49627
Alignment:
Q  174 atacatcaacttttgttgacccaactttctcttataaacaggaccgg 220  Q
    ||||||||||||||||||||||||  |||||||||||| ||||||||    
T  49581 atacatcaacttttgttgacccaaaattctcttataaataggaccgg 49627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1707 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold1707
Description:

Target: scaffold1707; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 171 - 216
Target Start/End: Original strand, 1408 - 1453
Alignment:
Q  171 tagatacatcaacttttgttgacccaactttctcttataaacagga 216  Q
    |||||||||||||||||||||||||||  |||||||||||| ||||    
T  1408 tagatacatcaacttttgttgacccaaaattctcttataaatagga 1453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0482 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0482
Description:

Target: scaffold0482; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 171 - 220
Target Start/End: Original strand, 12933 - 12982
Alignment:
Q  171 tagatacatcaacttttgttgacccaactttctcttataaacaggaccgg 220  Q
    |||||||||||||||||| ||||||||  |||||||||||| ||||||||    
T  12933 tagatacatcaacttttgctgacccaaaattctcttataaataggaccgg 12982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0464 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0464
Description:

Target: scaffold0464; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 171 - 220
Target Start/End: Complemental strand, 6188 - 6139
Alignment:
Q  171 tagatacatcaacttttgttgacccaactttctcttataaacaggaccgg 220  Q
    |||||||||||||||||||||||||||  || ||||||||| ||||||||    
T  6188 tagatacatcaacttttgttgacccaaaattttcttataaataggaccgg 6139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0204 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0204
Description:

Target: scaffold0204; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 171 - 220
Target Start/End: Original strand, 23858 - 23907
Alignment:
Q  171 tagatacatcaacttttgttgacccaactttctcttataaacaggaccgg 220  Q
    |||||||||||||||||||||||||||  || ||||||||| ||||||||    
T  23858 tagatacatcaacttttgttgacccaaaattttcttataaataggaccgg 23907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 172 - 210
Target Start/End: Original strand, 231377 - 231415
Alignment:
Q  172 agatacatcaacttttgttgacccaactttctcttataa 210  Q
    |||||||| |||||||||||| |||||||||||||||||    
T  231377 agatacataaacttttgttgatccaactttctcttataa 231415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0650 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0650
Description:

Target: scaffold0650; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 174 - 211
Target Start/End: Complemental strand, 39 - 2
Alignment:
Q  174 atacatcaacttttgttgacccaactttctcttataaa 211  Q
    |||||||||||||||||||| | |||||||||||||||    
T  39 atacatcaacttttgttgactcgactttctcttataaa 2  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0339 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0339
Description:

Target: scaffold0339; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 171 - 211
Target Start/End: Original strand, 14509 - 14549
Alignment:
Q  171 tagatacatcaacttttgttgacccaactttctcttataaa 211  Q
    |||||||||||| ||||||| |||||||||||| |||||||    
T  14509 tagatacatcaatttttgttaacccaactttcttttataaa 14549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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