View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF3327_low_70 (Length: 201)
Name: NF3327_low_70
Description: NF3327
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3327_low_70 |
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Alignment Details
Target: chr7 (Bit Score: 176; Significance: 5e-95; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 176; E-Value: 5e-95
Query Start/End: Original strand, 1 - 184
Target Start/End: Complemental strand, 46892833 - 46892650
Alignment:
| Q |
1 |
caatgtgaattccttacatgttattaaagaacaacaacagccaacaaagagtgacgatgataatgacatgaacgtcacgagtctttatccgtagtacgtt |
100 |
Q |
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| T |
46892833 |
caatgtgaatttcttacatgttattaaagaccaacaacagccaacaaagagtgacgatgataatgacatgaacgtcacgagtctttatccgtagtacgtt |
46892734 |
T |
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| Q |
101 |
tcttgttcttagaattagcataactcttgagatgaaaatcaagaaaaagagccaaaagagaagcattaaaaacagcattgaaac |
184 |
Q |
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| T |
46892733 |
tcttgttcttagaattagcataactcttgagatgaaaatcaagaaaaagagccaaaagagaagcattaaaaacagcattgaaac |
46892650 |
T |
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