View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF3328_high_16 (Length: 264)
Name: NF3328_high_16
Description: NF3328
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3328_high_16 |
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Alignment Details
Target: chr5 (Bit Score: 242; Significance: 1e-134; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 242; E-Value: 1e-134
Query Start/End: Original strand, 1 - 246
Target Start/End: Original strand, 35091908 - 35092153
Alignment:
| Q |
1 |
aaaatatatatatctttagcagccaggtcatttgctcatgtggctgactcataaaagcacttccactgaaatttagagcagcatatgttacagttataag |
100 |
Q |
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|||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
35091908 |
aaaaaatatatatctttagcagccaggtcatttgctcatgtggctgactcataaaagcacttccactgaaatttagagcagcatatgttacagttataag |
35092007 |
T |
|
| Q |
101 |
cttttttatgtgattcaaaatgttattaatcatttgttttctttgtaagtgcaatatggccaagttgaccatatttgttttatgagaatcactttgttag |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
35092008 |
cttttttatgtgattcaaaatgttattaatcatttgttttctttgtaagtgcaatatggccaagttgaccatatttgttttatgagaatcactttgttag |
35092107 |
T |
|
| Q |
201 |
tagaatctgagtttgcattccacttagtaagaatcacatgcttcat |
246 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
35092108 |
tagaatctgagtttgcattccacttagtaagaatcacatgcttcat |
35092153 |
T |
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