View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF3330_high_8 (Length: 244)

Name: NF3330_high_8
Description: NF3330
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF3330_high_8
NF3330_high_8
[»] chr7 (32 HSPs)
chr7 (1-106)||(36127835-36127942)
chr7 (104-173)||(36128761-36128833)
chr7 (171-244)||(19920562-19920635)
chr7 (172-241)||(31457997-31458066)
chr7 (172-241)||(21295151-21295220)
chr7 (172-241)||(38858298-38858367)
chr7 (172-241)||(39871581-39871650)
chr7 (172-241)||(41252329-41252398)
chr7 (172-209)||(44547426-44547463)
chr7 (172-244)||(25950831-25950902)
chr7 (172-206)||(32759556-32759590)
chr7 (172-206)||(35888312-35888346)
chr7 (172-209)||(2290016-2290053)
chr7 (172-209)||(7449270-7449307)
chr7 (172-209)||(26255096-26255133)
chr7 (172-209)||(29286037-29286074)
chr7 (172-209)||(31803120-31803157)
chr7 (172-209)||(32814433-32814470)
chr7 (172-209)||(32872375-32872412)
chr7 (172-209)||(33858866-33858903)
chr7 (172-209)||(34012517-34012554)
chr7 (172-209)||(36698131-36698168)
chr7 (172-209)||(38736451-38736488)
chr7 (172-209)||(39197718-39197755)
chr7 (172-241)||(40300230-40300299)
chr7 (172-209)||(41026096-41026133)
chr7 (172-209)||(46148431-46148468)
chr7 (172-209)||(46415005-46415042)
chr7 (172-209)||(48521029-48521066)
chr7 (177-209)||(31769332-31769364)
chr7 (172-208)||(33381574-33381610)
chr7 (177-209)||(41787255-41787287)
[»] chr6 (23 HSPs)
chr6 (172-241)||(5457412-5457481)
chr6 (172-241)||(9388759-9388828)
chr6 (172-244)||(402586-402658)
chr6 (178-241)||(12106032-12106095)
chr6 (171-209)||(287414-287452)
chr6 (171-209)||(33487832-33487870)
chr6 (172-241)||(34301800-34301869)
chr6 (172-240)||(25045612-25045680)
chr6 (172-244)||(34915508-34915580)
chr6 (177-241)||(6417881-6417944)
chr6 (171-209)||(8743187-8743225)
chr6 (172-206)||(16272971-16273005)
chr6 (172-209)||(231105-231142)
chr6 (172-209)||(2090658-2090695)
chr6 (172-209)||(4844400-4844437)
chr6 (172-205)||(6418135-6418168)
chr6 (172-209)||(13901641-13901678)
chr6 (172-209)||(15498629-15498666)
chr6 (172-209)||(23604460-23604497)
chr6 (172-209)||(30248647-30248684)
chr6 (168-208)||(13648130-13648170)
chr6 (177-209)||(17227527-17227559)
chr6 (171-207)||(23398141-23398177)
[»] chr8 (33 HSPs)
chr8 (169-209)||(36786464-36786504)
chr8 (172-244)||(2944237-2944309)
chr8 (177-240)||(44580848-44580911)
chr8 (172-241)||(51063-51132)
chr8 (171-240)||(5162303-5162372)
chr8 (172-241)||(13153928-13153997)
chr8 (172-241)||(14699452-14699521)
chr8 (172-241)||(28192143-28192212)
chr8 (172-241)||(32675725-32675794)
chr8 (172-241)||(34490517-34490586)
chr8 (172-209)||(40784891-40784928)
chr8 (172-241)||(41014504-41014573)
chr8 (172-241)||(44251089-44251158)
chr8 (172-244)||(39029178-39029250)
chr8 (172-206)||(36408415-36408449)
chr8 (172-209)||(1774342-1774379)
chr8 (172-209)||(2152240-2152277)
chr8 (172-209)||(5784148-5784185)
chr8 (172-209)||(8251933-8251970)
chr8 (172-209)||(8951428-8951465)
chr8 (172-209)||(9035539-9035576)
chr8 (172-209)||(12802611-12802648)
chr8 (172-209)||(17069844-17069881)
chr8 (172-209)||(17578392-17578429)
chr8 (172-209)||(18641380-18641417)
chr8 (172-209)||(18754144-18754181)
chr8 (172-209)||(26625793-26625830)
chr8 (172-209)||(28572046-28572083)
chr8 (172-209)||(28579639-28579676)
chr8 (172-209)||(33980465-33980502)
chr8 (172-209)||(34568490-34568527)
chr8 (172-204)||(26990567-26990599)
chr8 (171-203)||(38183571-38183603)
[»] chr4 (38 HSPs)
chr4 (172-241)||(1859144-1859213)
chr4 (172-241)||(43387961-43388030)
chr4 (172-241)||(46949992-46950061)
chr4 (172-244)||(4415965-4416037)
chr4 (177-240)||(54676552-54676615)
chr4 (172-241)||(4035825-4035894)
chr4 (172-241)||(5375525-5375594)
chr4 (172-241)||(5743627-5743696)
chr4 (172-209)||(25708678-25708715)
chr4 (171-244)||(26625967-26626040)
chr4 (171-240)||(29520133-29520202)
chr4 (172-241)||(34273187-34273256)
chr4 (172-241)||(36990914-36990983)
chr4 (172-209)||(47228728-47228765)
chr4 (172-241)||(47806860-47806929)
chr4 (172-244)||(625932-626003)
chr4 (172-240)||(46481358-46481426)
chr4 (172-244)||(49373658-49373730)
chr4 (178-209)||(18882357-18882388)
chr4 (171-209)||(32032993-32033031)
chr4 (172-206)||(39797434-39797468)
chr4 (172-209)||(9328240-9328277)
chr4 (172-209)||(20455181-20455218)
chr4 (172-209)||(25124246-25124283)
chr4 (172-209)||(28501386-28501423)
chr4 (172-209)||(30771528-30771565)
chr4 (172-209)||(31937076-31937113)
chr4 (172-209)||(33413518-33413555)
chr4 (172-209)||(44294789-44294826)
chr4 (172-209)||(45742806-45742843)
chr4 (172-209)||(49793091-49793128)
chr4 (172-209)||(52977982-52978019)
chr4 (172-209)||(53564356-53564393)
chr4 (172-209)||(56432518-56432555)
chr4 (172-208)||(24073127-24073163)
chr4 (172-208)||(32899219-32899255)
chr4 (177-209)||(41620519-41620551)
chr4 (172-208)||(55563128-55563164)
[»] chr3 (38 HSPs)
chr3 (171-244)||(8321924-8321997)
chr3 (172-241)||(23700753-23700822)
chr3 (172-241)||(23719208-23719277)
chr3 (172-241)||(23737664-23737733)
chr3 (172-244)||(7181350-7181422)
chr3 (172-244)||(47066934-47067006)
chr3 (171-209)||(26058545-26058583)
chr3 (172-241)||(9499465-9499534)
chr3 (172-241)||(12683150-12683219)
chr3 (172-241)||(22103897-22103966)
chr3 (172-241)||(25149090-25149159)
chr3 (172-241)||(35868051-35868120)
chr3 (172-241)||(37728713-37728782)
chr3 (172-241)||(44543782-44543851)
chr3 (176-241)||(46703031-46703096)
chr3 (172-240)||(14428610-14428678)
chr3 (172-244)||(43158701-43158773)
chr3 (172-240)||(46845461-46845529)
chr3 (177-209)||(49127198-49127230)
chr3 (171-209)||(45252772-45252810)
chr3 (172-241)||(4024052-4024121)
chr3 (172-209)||(4759351-4759388)
chr3 (172-209)||(10220933-10220970)
chr3 (172-209)||(12050392-12050429)
chr3 (172-209)||(17699031-17699068)
chr3 (172-209)||(21756486-21756523)
chr3 (172-209)||(24087335-24087372)
chr3 (172-209)||(26593765-26593802)
chr3 (172-209)||(36005502-36005539)
chr3 (172-209)||(41392880-41392917)
chr3 (172-209)||(43868103-43868140)
chr3 (172-209)||(43978160-43978197)
chr3 (172-209)||(46049986-46050023)
chr3 (172-209)||(51284062-51284099)
chr3 (172-209)||(53361855-53361892)
chr3 (177-209)||(20918224-20918256)
chr3 (177-209)||(20927186-20927218)
chr3 (177-209)||(33976508-33976540)
[»] chr2 (23 HSPs)
chr2 (172-241)||(5664638-5664707)
chr2 (172-244)||(8912839-8912911)
chr2 (172-241)||(2438225-2438294)
chr2 (172-209)||(25624733-25624770)
chr2 (172-241)||(27560206-27560275)
chr2 (172-241)||(34883816-34883885)
chr2 (172-241)||(39833967-39834036)
chr2 (172-241)||(40607702-40607771)
chr2 (178-209)||(17665529-17665560)
chr2 (171-209)||(7116299-7116337)
chr2 (171-209)||(17408294-17408332)
chr2 (172-234)||(28566151-28566213)
chr2 (172-206)||(29830757-29830791)
chr2 (172-209)||(2060316-2060353)
chr2 (172-209)||(7491844-7491881)
chr2 (172-209)||(8716892-8716929)
chr2 (172-209)||(8990204-8990241)
chr2 (172-209)||(11201683-11201720)
chr2 (172-209)||(20252210-20252247)
chr2 (172-209)||(26322293-26322330)
chr2 (172-209)||(34062665-34062702)
chr2 (172-209)||(36131028-36131065)
chr2 (172-209)||(41450516-41450553)
[»] chr1 (28 HSPs)
chr1 (172-244)||(4102679-4102751)
chr1 (171-241)||(23541978-23542048)
chr1 (171-241)||(36694853-36694923)
chr1 (171-241)||(36710954-36711024)
chr1 (172-241)||(1039349-1039418)
chr1 (172-241)||(1046255-1046324)
chr1 (172-241)||(11741397-11741466)
chr1 (172-241)||(15811200-15811269)
chr1 (172-241)||(37951917-37951986)
chr1 (172-241)||(39497433-39497502)
chr1 (172-241)||(45039412-45039481)
chr1 (172-241)||(49907021-49907090)
chr1 (172-241)||(52431142-52431211)
chr1 (172-244)||(7763714-7763786)
chr1 (172-244)||(25509209-25509280)
chr1 (177-240)||(30289831-30289894)
chr1 (172-209)||(2279953-2279991)
chr1 (171-209)||(43456621-43456659)
chr1 (171-209)||(46075867-46075905)
chr1 (172-209)||(943637-943674)
chr1 (177-234)||(13343778-13343835)
chr1 (172-209)||(27037269-27037306)
chr1 (172-209)||(30290265-30290302)
chr1 (172-209)||(39363194-39363231)
chr1 (172-209)||(42276161-42276198)
chr1 (172-209)||(44649629-44649666)
chr1 (172-205)||(45039676-45039709)
chr1 (172-209)||(50937779-50937816)
[»] scaffold0339 (1 HSPs)
scaffold0339 (172-209)||(7140-7177)
[»] scaffold0025 (1 HSPs)
scaffold0025 (172-209)||(65637-65674)
[»] scaffold0019 (1 HSPs)
scaffold0019 (172-241)||(117846-117915)
[»] chr5 (24 HSPs)
chr5 (172-241)||(1265949-1266018)
chr5 (172-241)||(9828393-9828462)
chr5 (172-241)||(22527692-22527761)
chr5 (172-209)||(32147294-32147331)
chr5 (172-241)||(40004377-40004446)
chr5 (172-240)||(23286443-23286511)
chr5 (177-241)||(31642192-31642256)
chr5 (172-244)||(43060376-43060448)
chr5 (178-209)||(4194688-4194719)
chr5 (171-209)||(5527973-5528011)
chr5 (172-206)||(14570893-14570927)
chr5 (172-209)||(3028013-3028050)
chr5 (172-209)||(6673228-6673265)
chr5 (172-209)||(8949812-8949849)
chr5 (172-209)||(14913648-14913685)
chr5 (172-209)||(16127259-16127296)
chr5 (172-209)||(23260138-23260175)
chr5 (172-209)||(26894873-26894910)
chr5 (172-241)||(34662204-34662273)
chr5 (177-209)||(4985116-4985148)
chr5 (172-208)||(7951562-7951598)
chr5 (172-204)||(13661124-13661156)
chr5 (172-208)||(19571940-19571976)
chr5 (172-208)||(32964133-32964169)
[»] scaffold0604 (1 HSPs)
scaffold0604 (171-244)||(3748-3820)
[»] scaffold0161 (1 HSPs)
scaffold0161 (172-244)||(3438-3509)
[»] scaffold0674 (1 HSPs)
scaffold0674 (172-209)||(5151-5188)
[»] scaffold0549 (1 HSPs)
scaffold0549 (172-209)||(10182-10219)
[»] scaffold0240 (1 HSPs)
scaffold0240 (172-209)||(18497-18534)
[»] scaffold0122 (1 HSPs)
scaffold0122 (172-209)||(12065-12102)
[»] scaffold0107 (1 HSPs)
scaffold0107 (172-209)||(48654-48691)
[»] scaffold0039 (1 HSPs)
scaffold0039 (172-209)||(104061-104098)
[»] scaffold0029 (1 HSPs)
scaffold0029 (172-209)||(51682-51719)
[»] scaffold0012 (1 HSPs)
scaffold0012 (172-209)||(47640-47677)
[»] scaffold0008 (1 HSPs)
scaffold0008 (172-209)||(259122-259159)


Alignment Details
Target: chr7 (Bit Score: 89; Significance: 5e-43; HSPs: 32)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 1 - 106
Target Start/End: Original strand, 36127835 - 36127942
Alignment:
Q  1 ctgtgcttttaaaaatcggatatatatcttatctgagatatttactattcacacctccttctttaattacactctcctaac--tatttttatttttgtta 98  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||  |||||||||||||||||    
T  36127835 ctgtgcttttaaaaatcggatatatatcttatctgagagatttactattcacacttccttctttaattacactctcctaactgtatttttatttttgtta 36127934  T
Q  99 atcaccgg 106  Q
    ||||||||    
T  36127935 atcaccgg 36127942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 104 - 173
Target Start/End: Original strand, 36128761 - 36128833
Alignment:
Q  104 cggatttgaactttctccctt---acaagtttaaacacctactacgaatgaacacgaacttcgttccttgcta 173  Q
    ||||||||||||| |||||||   |||||||||||||| ||||||||||||||||||||||||||||||||||    
T  36128761 cggatttgaacttcctcccttgttacaagtttaaacacttactacgaatgaacacgaacttcgttccttgcta 36128833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 171 - 244
Target Start/End: Original strand, 19920562 - 19920635
Alignment:
Q  171 ctacttcctccgtccctaattataagacctttttgagaannnnnnnngttcctttttataagacccctttgcta 244  Q
    ||||| ||||||||||||||||||||||| |||||||||        |||||||||||||||||||||||||||    
T  19920562 ctactccctccgtccctaattataagacccttttgagaattttttttgttcctttttataagacccctttgcta 19920635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 172 - 241
Target Start/End: Original strand, 31457997 - 31458066
Alignment:
Q  172 tacttcctccgtccctaattataagacctttttgagaannnnnnnngttcctttttataagacccctttg 241  Q
    |||||||||||||||||||||||||||| |||||||||        || |||||||||||||||||||||    
T  31457997 tacttcctccgtccctaattataagacccttttgagaattttttttgtccctttttataagacccctttg 31458066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 172 - 241
Target Start/End: Original strand, 21295151 - 21295220
Alignment:
Q  172 tacttcctccgtccctaattataagacctttttgagaannnnnnnngttcctttttataagacccctttg 241  Q
    |||| ||||||||||||||||||||||| |||||||||        || |||||||||||||||||||||    
T  21295151 tactccctccgtccctaattataagacccttttgagaattttttttgtccctttttataagacccctttg 21295220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 172 - 241
Target Start/End: Original strand, 38858298 - 38858367
Alignment:
Q  172 tacttcctccgtccctaattataagacctttttgagaannnnnnnngttcctttttataagacccctttg 241  Q
    |||| ||||||||||||||||||||||| |||||||||        || |||||||||||||||||||||    
T  38858298 tactccctccgtccctaattataagacccttttgagaattttttttgtccctttttataagacccctttg 38858367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 172 - 241
Target Start/End: Complemental strand, 39871650 - 39871581
Alignment:
Q  172 tacttcctccgtccctaattataagacctttttgagaannnnnnnngttcctttttataagacccctttg 241  Q
    |||| ||||||||||||||||||||||| |||||||||        || |||||||||||||||||||||    
T  39871650 tactccctccgtccctaattataagacccttttgagaaatttttttgtccctttttataagacccctttg 39871581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 172 - 241
Target Start/End: Complemental strand, 41252398 - 41252329
Alignment:
Q  172 tacttcctccgtccctaattataagacctttttgagaannnnnnnngttcctttttataagacccctttg 241  Q
    |||| ||||||||||||||||||||||| |||||||||        || |||||||||||||||||||||    
T  41252398 tactccctccgtccctaattataagacccttttgagaattttttttgtccctttttataagacccctttg 41252329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 172 - 209
Target Start/End: Original strand, 44547426 - 44547463
Alignment:
Q  172 tacttcctccgtccctaattataagacctttttgagaa 209  Q
    |||| |||||||||||||||||||||||||||||||||    
T  44547426 tactccctccgtccctaattataagacctttttgagaa 44547463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 172 - 244
Target Start/End: Original strand, 25950831 - 25950902
Alignment:
Q  172 tacttcctccgtccctaattataagacctttttgagaannnnnnnngttcctttttataagacccctttgcta 244  Q
    |||| ||||||||| |||||||||||||||||||||||        || ||||||||||||||||||||||||    
T  25950831 tactacctccgtccttaattataagacctttttgagaa-tttttttgtccctttttataagacccctttgcta 25950902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 172 - 206
Target Start/End: Original strand, 32759556 - 32759590
Alignment:
Q  172 tacttcctccgtccctaattataagacctttttga 206  Q
    |||| ||||||||||||||||||||||||||||||    
T  32759556 tactacctccgtccctaattataagacctttttga 32759590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 172 - 206
Target Start/End: Original strand, 35888312 - 35888346
Alignment:
Q  172 tacttcctccgtccctaattataagacctttttga 206  Q
    |||| ||||||||||||||||||||||||||||||    
T  35888312 tactacctccgtccctaattataagacctttttga 35888346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 172 - 209
Target Start/End: Complemental strand, 2290053 - 2290016
Alignment:
Q  172 tacttcctccgtccctaattataagacctttttgagaa 209  Q
    |||| ||||||||||||||||||||||| |||||||||    
T  2290053 tactacctccgtccctaattataagacccttttgagaa 2290016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 172 - 209
Target Start/End: Original strand, 7449270 - 7449307
Alignment:
Q  172 tacttcctccgtccctaattataagacctttttgagaa 209  Q
    |||| ||||||||||||||||||||||| |||||||||    
T  7449270 tactccctccgtccctaattataagaccattttgagaa 7449307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 172 - 209
Target Start/End: Original strand, 26255096 - 26255133
Alignment:
Q  172 tacttcctccgtccctaattataagacctttttgagaa 209  Q
    |||| ||||||||||||||||||||||| |||||||||    
T  26255096 tactccctccgtccctaattataagacccttttgagaa 26255133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 172 - 209
Target Start/End: Complemental strand, 29286074 - 29286037
Alignment:
Q  172 tacttcctccgtccctaattataagacctttttgagaa 209  Q
    |||| ||||||||||||||||||||||| |||||||||    
T  29286074 tactccctccgtccctaattataagacccttttgagaa 29286037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 172 - 209
Target Start/End: Complemental strand, 31803157 - 31803120
Alignment:
Q  172 tacttcctccgtccctaattataagacctttttgagaa 209  Q
    |||| ||||||||||||||||||||| |||||||||||    
T  31803157 tactacctccgtccctaattataagatctttttgagaa 31803120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 172 - 209
Target Start/End: Original strand, 32814433 - 32814470
Alignment:
Q  172 tacttcctccgtccctaattataagacctttttgagaa 209  Q
    |||| ||||||||||||||||||||||| |||||||||    
T  32814433 tactccctccgtccctaattataagacccttttgagaa 32814470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 172 - 209
Target Start/End: Complemental strand, 32872412 - 32872375
Alignment:
Q  172 tacttcctccgtccctaattataagacctttttgagaa 209  Q
    |||| ||||||||||||||||||||||| |||||||||    
T  32872412 tactccctccgtccctaattataagacccttttgagaa 32872375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 172 - 209
Target Start/End: Complemental strand, 33858903 - 33858866
Alignment:
Q  172 tacttcctccgtccctaattataagacctttttgagaa 209  Q
    |||| ||||||||||||||||||||||| |||||||||    
T  33858903 tactccctccgtccctaattataagacccttttgagaa 33858866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 172 - 209
Target Start/End: Complemental strand, 34012554 - 34012517
Alignment:
Q  172 tacttcctccgtccctaattataagacctttttgagaa 209  Q
    |||| ||||||||||||||||||||||| |||||||||    
T  34012554 tactacctccgtccctaattataagacccttttgagaa 34012517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 172 - 209
Target Start/End: Complemental strand, 36698168 - 36698131
Alignment:
Q  172 tacttcctccgtccctaattataagacctttttgagaa 209  Q
    |||| ||||||||||||||||||||||| |||||||||    
T  36698168 tactccctccgtccctaattataagacccttttgagaa 36698131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 172 - 209
Target Start/End: Original strand, 38736451 - 38736488
Alignment:
Q  172 tacttcctccgtccctaattataagacctttttgagaa 209  Q
    |||| ||||| |||||||||||||||||||||||||||    
T  38736451 tactacctccctccctaattataagacctttttgagaa 38736488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 172 - 209
Target Start/End: Original strand, 39197718 - 39197755
Alignment:
Q  172 tacttcctccgtccctaattataagacctttttgagaa 209  Q
    |||| ||||||||||||||||||||||| |||||||||    
T  39197718 tactccctccgtccctaattataagacccttttgagaa 39197755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 172 - 241
Target Start/End: Original strand, 40300230 - 40300299
Alignment:
Q  172 tacttcctccgtccctaattataagacctttttgagaannnnnnnngttcctttttataagacccctttg 241  Q
    |||| ||||||||||||||||||||||| ||||||||         || |||||||||||||||||||||    
T  40300230 tactccctccgtccctaattataagacccttttgagatttttttttgtccctttttataagacccctttg 40300299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 172 - 209
Target Start/End: Complemental strand, 41026133 - 41026096
Alignment:
Q  172 tacttcctccgtccctaattataagacctttttgagaa 209  Q
    |||| ||||||||||||||||||||||| |||||||||    
T  41026133 tactccctccgtccctaattataagacccttttgagaa 41026096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 172 - 209
Target Start/End: Original strand, 46148431 - 46148468
Alignment:
Q  172 tacttcctccgtccctaattataagacctttttgagaa 209  Q
    |||| ||||||||||||| |||||||||||||||||||    
T  46148431 tactacctccgtccctaaatataagacctttttgagaa 46148468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 172 - 209
Target Start/End: Complemental strand, 46415042 - 46415005
Alignment:
Q  172 tacttcctccgtccctaattataagacctttttgagaa 209  Q
    |||| ||||||||||||||||||||||| |||||||||    
T  46415042 tactacctccgtccctaattataagaccattttgagaa 46415005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 172 - 209
Target Start/End: Original strand, 48521029 - 48521066
Alignment:
Q  172 tacttcctccgtccctaattataagacctttttgagaa 209  Q
    |||| ||||||||||||||||||||||| |||||||||    
T  48521029 tactccctccgtccctaattataagacccttttgagaa 48521066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 177 - 209
Target Start/End: Complemental strand, 31769364 - 31769332
Alignment:
Q  177 cctccgtccctaattataagacctttttgagaa 209  Q
    ||||||||||||||||||||||| |||||||||    
T  31769364 cctccgtccctaattataagacccttttgagaa 31769332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 172 - 208
Target Start/End: Complemental strand, 33381610 - 33381574
Alignment:
Q  172 tacttcctccgtccctaattataagacctttttgaga 208  Q
    |||| ||||||||||||||||||||||| ||||||||    
T  33381610 tactacctccgtccctaattataagacccttttgaga 33381574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 177 - 209
Target Start/End: Original strand, 41787255 - 41787287
Alignment:
Q  177 cctccgtccctaattataagacctttttgagaa 209  Q
    ||||| |||||||||||||||||||||||||||    
T  41787255 cctccatccctaattataagacctttttgagaa 41787287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 23)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 172 - 241
Target Start/End: Original strand, 5457412 - 5457481
Alignment:
Q  172 tacttcctccgtccctaattataagacctttttgagaannnnnnnngttcctttttataagacccctttg 241  Q
    |||| |||||||||||||||||||||||||||||||||        ||||||||||||||||||||||||    
T  5457412 tactccctccgtccctaattataagacctttttgagaattttttttgttcctttttataagacccctttg 5457481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 172 - 241
Target Start/End: Complemental strand, 9388828 - 9388759
Alignment:
Q  172 tacttcctccgtccctaattataagacctttttgagaannnnnnnngttcctttttataagacccctttg 241  Q
    |||| |||||||||||||||||||||||||||||||||        || |||||||||||||||||||||    
T  9388828 tactccctccgtccctaattataagacctttttgagaattttttttgtccctttttataagacccctttg 9388759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 172 - 244
Target Start/End: Complemental strand, 402658 - 402586
Alignment:
Q  172 tacttcctccgtccctaattataagacctttttgagaannnnnnnngttcctttttataagacccctttgcta 244  Q
    |||| ||||||||||||||||||||||| |||||||||        || ||||||||||||||||||||||||    
T  402658 tactacctccgtccctaattataagacccttttgagaattttttttgtccctttttataagacccctttgcta 402586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 178 - 241
Target Start/End: Complemental strand, 12106095 - 12106032
Alignment:
Q  178 ctccgtccctaattataagacctttttgagaannnnnnnngttcctttttataagacccctttg 241  Q
    ||||||||||||||||||||||||||||||||        || |||||||||||||||||||||    
T  12106095 ctccgtccctaattataagacctttttgagaattttttttgtccctttttataagacccctttg 12106032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 171 - 209
Target Start/End: Complemental strand, 287452 - 287414
Alignment:
Q  171 ctacttcctccgtccctaattataagacctttttgagaa 209  Q
    ||||| |||||||||||||||||||||||||||||||||    
T  287452 ctactccctccgtccctaattataagacctttttgagaa 287414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 171 - 209
Target Start/End: Original strand, 33487832 - 33487870
Alignment:
Q  171 ctacttcctccgtccctaattataagacctttttgagaa 209  Q
    ||||| |||||||||||||||||||||||||||||||||    
T  33487832 ctactccctccgtccctaattataagacctttttgagaa 33487870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 172 - 241
Target Start/End: Complemental strand, 34301869 - 34301800
Alignment:
Q  172 tacttcctccgtccctaattataagacctttttgagaannnnnnnngttcctttttataagacccctttg 241  Q
    |||| ||||||||||||||||||||||| |||||||||        || |||||||||||||||||||||    
T  34301869 tactccctccgtccctaattataagacccttttgagaattttttttgtccctttttataagacccctttg 34301800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 172 - 240
Target Start/End: Complemental strand, 25045680 - 25045612
Alignment:
Q  172 tacttcctccgtccctaattataagacctttttgagaannnnnnnngttcctttttataagaccccttt 240  Q
    |||| ||||||||||||||||||||||| |||||||||        || ||||||||||||||||||||    
T  25045680 tactacctccgtccctaattataagacccttttgagaattttttttgtccctttttataagaccccttt 25045612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 172 - 244
Target Start/End: Complemental strand, 34915580 - 34915508
Alignment:
Q  172 tacttcctccgtccctaattataagacctttttgagaannnnnnnngttcctttttataagacccctttgcta 244  Q
    |||| ||||||||||||||||||||||| |||||||||        || |||||||||||| |||||||||||    
T  34915580 tactacctccgtccctaattataagacccttttgagaattttttttgtccctttttataagtcccctttgcta 34915508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 177 - 241
Target Start/End: Original strand, 6417881 - 6417944
Alignment:
Q  177 cctccgtccctaattataagacctttttgagaannnnnnnngttcctttttataagacccctttg 241  Q
    |||||||||||||| ||||||||||||||||||        ||||||||||||||||||||||||    
T  6417881 cctccgtccctaatcataagacctttttgagaa-tttttttgttcctttttataagacccctttg 6417944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 171 - 209
Target Start/End: Original strand, 8743187 - 8743225
Alignment:
Q  171 ctacttcctccgtccctaattataagacctttttgagaa 209  Q
    ||||| ||||||||||||||||||||||| |||||||||    
T  8743187 ctactccctccgtccctaattataagacccttttgagaa 8743225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 172 - 206
Target Start/End: Complemental strand, 16273005 - 16272971
Alignment:
Q  172 tacttcctccgtccctaattataagacctttttga 206  Q
    |||||||||||||||||||||||||||| ||||||    
T  16273005 tacttcctccgtccctaattataagacccttttga 16272971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 172 - 209
Target Start/End: Complemental strand, 231142 - 231105
Alignment:
Q  172 tacttcctccgtccctaattataagacctttttgagaa 209  Q
    |||| ||||||||||||||||||||||| |||||||||    
T  231142 tactccctccgtccctaattataagacccttttgagaa 231105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 172 - 209
Target Start/End: Original strand, 2090658 - 2090695
Alignment:
Q  172 tacttcctccgtccctaattataagacctttttgagaa 209  Q
    |||| ||||||||||||||||||||||| |||||||||    
T  2090658 tactacctccgtccctaattataagacccttttgagaa 2090695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 172 - 209
Target Start/End: Original strand, 4844400 - 4844437
Alignment:
Q  172 tacttcctccgtccctaattataagacctttttgagaa 209  Q
    |||| ||||||||||||||||||||||| |||||||||    
T  4844400 tactccctccgtccctaattataagacccttttgagaa 4844437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 172 - 205
Target Start/End: Complemental strand, 6418168 - 6418135
Alignment:
Q  172 tacttcctccgtccctaattataagacctttttg 205  Q
    |||| |||||||||||||||||||||||||||||    
T  6418168 tactccctccgtccctaattataagacctttttg 6418135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 172 - 209
Target Start/End: Original strand, 13901641 - 13901678
Alignment:
Q  172 tacttcctccgtccctaattataagacctttttgagaa 209  Q
    |||| ||||||||||||||||||||||| |||||||||    
T  13901641 tactacctccgtccctaattataagacccttttgagaa 13901678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 172 - 209
Target Start/End: Original strand, 15498629 - 15498666
Alignment:
Q  172 tacttcctccgtccctaattataagacctttttgagaa 209  Q
    |||| ||||||||||||||||||||||| |||||||||    
T  15498629 tactacctccgtccctaattataagacccttttgagaa 15498666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 172 - 209
Target Start/End: Original strand, 23604460 - 23604497
Alignment:
Q  172 tacttcctccgtccctaattataagacctttttgagaa 209  Q
    |||| ||||||||||||||||||||||| |||||||||    
T  23604460 tactacctccgtccctaattataagacccttttgagaa 23604497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 172 - 209
Target Start/End: Original strand, 30248647 - 30248684
Alignment:
Q  172 tacttcctccgtccctaattataagacctttttgagaa 209  Q
    |||| ||||||||||||||||||||||| |||||||||    
T  30248647 tactccctccgtccctaattataagacccttttgagaa 30248684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 168 - 208
Target Start/End: Complemental strand, 13648170 - 13648130
Alignment:
Q  168 ttgctacttcctccgtccctaattataagacctttttgaga 208  Q
    |||||||| ||||||||| ||||||||||||| ||||||||    
T  13648170 ttgctactccctccgtccttaattataagacccttttgaga 13648130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 177 - 209
Target Start/End: Complemental strand, 17227559 - 17227527
Alignment:
Q  177 cctccgtccctaattataagacctttttgagaa 209  Q
    ||||||||||||||||||||||| |||||||||    
T  17227559 cctccgtccctaattataagacccttttgagaa 17227527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 171 - 207
Target Start/End: Complemental strand, 23398177 - 23398141
Alignment:
Q  171 ctacttcctccgtccctaattataagacctttttgag 207  Q
    ||||| ||||||||||||||||||||||| |||||||    
T  23398177 ctactccctccgtccctaattataagacccttttgag 23398141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 33)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 169 - 209
Target Start/End: Original strand, 36786464 - 36786504
Alignment:
Q  169 tgctacttcctccgtccctaattataagacctttttgagaa 209  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  36786464 tgctacttcctccgtccctaattataagacctttttgagaa 36786504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 172 - 244
Target Start/End: Complemental strand, 2944309 - 2944237
Alignment:
Q  172 tacttcctccgtccctaattataagacctttttgagaannnnnnnngttcctttttataagacccctttgcta 244  Q
    |||| ||||||||||||||||||||||| |||||||||        || ||||||||||||||||||||||||    
T  2944309 tactccctccgtccctaattataagacccttttgagaattttttttgtccctttttataagacccctttgcta 2944237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 177 - 240
Target Start/End: Complemental strand, 44580911 - 44580848
Alignment:
Q  177 cctccgtccctaattataagacctttttgagaannnnnnnngttcctttttataagaccccttt 240  Q
    |||||||||||||||||||||||||||||||||        || ||||||||||||||||||||    
T  44580911 cctccgtccctaattataagacctttttgagaaatttttttgtccctttttataagaccccttt 44580848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 172 - 241
Target Start/End: Complemental strand, 51132 - 51063
Alignment:
Q  172 tacttcctccgtccctaattataagacctttttgagaannnnnnnngttcctttttataagacccctttg 241  Q
    |||| ||||||||||||||||||||||| |||||||||        || |||||||||||||||||||||    
T  51132 tactccctccgtccctaattataagacccttttgagaattttttttgtccctttttataagacccctttg 51063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 171 - 240
Target Start/End: Original strand, 5162303 - 5162372
Alignment:
Q  171 ctacttcctccgtccctaattataagacctttttgagaannnnnnnngttcctttttataagaccccttt 240  Q
    ||||| ||||||||||||||||||||||| |||||||||        || ||||||||||||||||||||    
T  5162303 ctactacctccgtccctaattataagacccttttgagaattttttttgtccctttttataagaccccttt 5162372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 172 - 241
Target Start/End: Original strand, 13153928 - 13153997
Alignment:
Q  172 tacttcctccgtccctaattataagacctttttgagaannnnnnnngttcctttttataagacccctttg 241  Q
    |||| ||||||||||||||||||||||| |||||||||        || |||||||||||||||||||||    
T  13153928 tactccctccgtccctaattataagacccttttgagaattttttttgtccctttttataagacccctttg 13153997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 172 - 241
Target Start/End: Original strand, 14699452 - 14699521
Alignment:
Q  172 tacttcctccgtccctaattataagacctttttgagaannnnnnnngttcctttttataagacccctttg 241  Q
    |||||||||||||||||||||||||| | |||||||||        || |||||||||||||||||||||    
T  14699452 tacttcctccgtccctaattataagatccttttgagaattttttttgtccctttttataagacccctttg 14699521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 172 - 241
Target Start/End: Complemental strand, 28192212 - 28192143
Alignment:
Q  172 tacttcctccgtccctaattataagacctttttgagaannnnnnnngttcctttttataagacccctttg 241  Q
    |||| ||||||||||||||||||||||| |||||||||        || |||||||||||||||||||||    
T  28192212 tactccctccgtccctaattataagacccttttgagaattttttttgtccctttttataagacccctttg 28192143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 172 - 241
Target Start/End: Complemental strand, 32675794 - 32675725
Alignment:
Q  172 tacttcctccgtccctaattataagacctttttgagaannnnnnnngttcctttttataagacccctttg 241  Q
    |||| ||||||||||||||||||||||| |||||||||        || |||||||||||||||||||||    
T  32675794 tactccctccgtccctaattataagacccttttgagaaaaaaatttgtccctttttataagacccctttg 32675725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 172 - 241
Target Start/End: Original strand, 34490517 - 34490586
Alignment:
Q  172 tacttcctccgtccctaattataagacctttttgagaannnnnnnngttcctttttataagacccctttg 241  Q
    |||| ||||||||||||||||||||| |||||||||||        || |||||||||||||||||||||    
T  34490517 tactccctccgtccctaattataagatctttttgagaattttttttgtccctttttataagacccctttg 34490586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 172 - 209
Target Start/End: Original strand, 40784891 - 40784928
Alignment:
Q  172 tacttcctccgtccctaattataagacctttttgagaa 209  Q
    |||| |||||||||||||||||||||||||||||||||    
T  40784891 tactacctccgtccctaattataagacctttttgagaa 40784928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 172 - 241
Target Start/End: Original strand, 41014504 - 41014573
Alignment:
Q  172 tacttcctccgtccctaattataagacctttttgagaannnnnnnngttcctttttataagacccctttg 241  Q
    |||| ||||||||||||||||||||| ||||||||||         ||||||||||||||||||||||||    
T  41014504 tactccctccgtccctaattataagatctttttgagatttttttttgttcctttttataagacccctttg 41014573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 172 - 241
Target Start/End: Complemental strand, 44251158 - 44251089
Alignment:
Q  172 tacttcctccgtccctaattataagacctttttgagaannnnnnnngttcctttttataagacccctttg 241  Q
    |||| ||||||||||||||||||||||| |||||||||        || |||||||||||||||||||||    
T  44251158 tactccctccgtccctaattataagaccattttgagaattttttttgtccctttttataagacccctttg 44251089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 172 - 244
Target Start/End: Original strand, 39029178 - 39029250
Alignment:
Q  172 tacttcctccgtccctaattataagacctttttgagaannnnnnnngttcctttttataagacccctttgcta 244  Q
    |||| ||||||||||||||||||||||| |||||||||        || | ||||||||||||||||||||||    
T  39029178 tactccctccgtccctaattataagacccttttgagaaaattttttgtccttttttataagacccctttgcta 39029250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 172 - 206
Target Start/End: Original strand, 36408415 - 36408449
Alignment:
Q  172 tacttcctccgtccctaattataagacctttttga 206  Q
    |||| ||||||||||||||||||||||||||||||    
T  36408415 tactacctccgtccctaattataagacctttttga 36408449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 172 - 209
Target Start/End: Original strand, 1774342 - 1774379
Alignment:
Q  172 tacttcctccgtccctaattataagacctttttgagaa 209  Q
    |||| ||||||||||||||||||||||| |||||||||    
T  1774342 tactccctccgtccctaattataagacccttttgagaa 1774379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 172 - 209
Target Start/End: Complemental strand, 2152277 - 2152240
Alignment:
Q  172 tacttcctccgtccctaattataagacctttttgagaa 209  Q
    |||| ||||||||||||||||||||||| |||||||||    
T  2152277 tactacctccgtccctaattataagacccttttgagaa 2152240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 172 - 209
Target Start/End: Complemental strand, 5784185 - 5784148
Alignment:
Q  172 tacttcctccgtccctaattataagacctttttgagaa 209  Q
    |||| ||||||||||||||||||||| |||||||||||    
T  5784185 tactacctccgtccctaattataagatctttttgagaa 5784148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 172 - 209
Target Start/End: Complemental strand, 8251970 - 8251933
Alignment:
Q  172 tacttcctccgtccctaattataagacctttttgagaa 209  Q
    |||| ||||||||||||||||||||||| |||||||||    
T  8251970 tactccctccgtccctaattataagacccttttgagaa 8251933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 172 - 209
Target Start/End: Complemental strand, 8951465 - 8951428
Alignment:
Q  172 tacttcctccgtccctaattataagacctttttgagaa 209  Q
    |||| ||||||||||||||||||||||| |||||||||    
T  8951465 tactccctccgtccctaattataagacccttttgagaa 8951428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 172 - 209
Target Start/End: Complemental strand, 9035576 - 9035539
Alignment:
Q  172 tacttcctccgtccctaattataagacctttttgagaa 209  Q
    |||| ||||||||||||||||||||||| |||||||||    
T  9035576 tactccctccgtccctaattataagaccattttgagaa 9035539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 172 - 209
Target Start/End: Original strand, 12802611 - 12802648
Alignment:
Q  172 tacttcctccgtccctaattataagacctttttgagaa 209  Q
    |||| ||||||||||||||||||||||| |||||||||    
T  12802611 tactacctccgtccctaattataagacccttttgagaa 12802648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 172 - 209
Target Start/End: Complemental strand, 17069881 - 17069844
Alignment:
Q  172 tacttcctccgtccctaattataagacctttttgagaa 209  Q
    |||| ||||||||||||||||||||||| |||||||||    
T  17069881 tactacctccgtccctaattataagacccttttgagaa 17069844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 172 - 209
Target Start/End: Original strand, 17578392 - 17578429
Alignment:
Q  172 tacttcctccgtccctaattataagacctttttgagaa 209  Q
    |||| ||||||||||||||||||||||| |||||||||    
T  17578392 tactacctccgtccctaattataagacccttttgagaa 17578429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 172 - 209
Target Start/End: Complemental strand, 18641417 - 18641380
Alignment:
Q  172 tacttcctccgtccctaattataagacctttttgagaa 209  Q
    |||| ||||||||||||||||||||||| |||||||||    
T  18641417 tactacctccgtccctaattataagacccttttgagaa 18641380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 172 - 209
Target Start/End: Original strand, 18754144 - 18754181
Alignment:
Q  172 tacttcctccgtccctaattataagacctttttgagaa 209  Q
    |||| ||||||||||||||||||||||| |||||||||    
T  18754144 tactccctccgtccctaattataagacccttttgagaa 18754181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 172 - 209
Target Start/End: Original strand, 26625793 - 26625830
Alignment:
Q  172 tacttcctccgtccctaattataagacctttttgagaa 209  Q
    |||| ||||| |||||||||||||||||||||||||||    
T  26625793 tactacctccatccctaattataagacctttttgagaa 26625830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 172 - 209
Target Start/End: Original strand, 28572046 - 28572083
Alignment:
Q  172 tacttcctccgtccctaattataagacctttttgagaa 209  Q
    |||| ||||||||||||||||||||||| |||||||||    
T  28572046 tactccctccgtccctaattataagacccttttgagaa 28572083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 172 - 209
Target Start/End: Original strand, 28579639 - 28579676
Alignment:
Q  172 tacttcctccgtccctaattataagacctttttgagaa 209  Q
    |||| ||||||||||||||||||||||| |||||||||    
T  28579639 tactccctccgtccctaattataagacccttttgagaa 28579676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 172 - 209
Target Start/End: Original strand, 33980465 - 33980502
Alignment:
Q  172 tacttcctccgtccctaattataagacctttttgagaa 209  Q
    |||| |||||||||||||||||||||| ||||||||||    
T  33980465 tactacctccgtccctaattataagacttttttgagaa 33980502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 172 - 209
Target Start/End: Original strand, 34568490 - 34568527
Alignment:
Q  172 tacttcctccgtccctaattataagacctttttgagaa 209  Q
    |||| ||||||||||||||||||||||| |||||||||    
T  34568490 tactccctccgtccctaattataagacccttttgagaa 34568527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 172 - 204
Target Start/End: Original strand, 26990567 - 26990599
Alignment:
Q  172 tacttcctccgtccctaattataagaccttttt 204  Q
    |||| ||||||||||||||||||||||||||||    
T  26990567 tactccctccgtccctaattataagaccttttt 26990599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 171 - 203
Target Start/End: Complemental strand, 38183603 - 38183571
Alignment:
Q  171 ctacttcctccgtccctaattataagacctttt 203  Q
    ||||| |||||||||||||||||||||||||||    
T  38183603 ctactccctccgtccctaattataagacctttt 38183571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 38; Significance: 0.000000000001; HSPs: 38)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 172 - 241
Target Start/End: Original strand, 1859144 - 1859213
Alignment:
Q  172 tacttcctccgtccctaattataagacctttttgagaannnnnnnngttcctttttataagacccctttg 241  Q
    |||| |||||||||||||||||||||||||||||||||        || |||||||||||||||||||||    
T  1859144 tactccctccgtccctaattataagacctttttgagaattttttttgtccctttttataagacccctttg 1859213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 172 - 241
Target Start/End: Complemental strand, 43388030 - 43387961
Alignment:
Q  172 tacttcctccgtccctaattataagacctttttgagaannnnnnnngttcctttttataagacccctttg 241  Q
    |||||||||||||||||||||||||||| |||||||||        || |||||||||||||||||||||    
T  43388030 tacttcctccgtccctaattataagacccttttgagaatttcttttgtccctttttataagacccctttg 43387961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 172 - 241
Target Start/End: Original strand, 46949992 - 46950061
Alignment:
Q  172 tacttcctccgtccctaattataagacctttttgagaannnnnnnngttcctttttataagacccctttg 241  Q
    |||| ||||||||||||||||||||||| |||||||||        ||||||||||||||||||||||||    
T  46949992 tactacctccgtccctaattataagacccttttgagaatattttttgttcctttttataagacccctttg 46950061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 172 - 244
Target Start/End: Original strand, 4415965 - 4416037
Alignment:
Q  172 tacttcctccgtccctaattataagacctttttgagaannnnnnnngttcctttttataagacccctttgcta 244  Q
    |||| ||||||||||||||||||||||| |||||||||        || ||||||||||||||||||||||||    
T  4415965 tactacctccgtccctaattataagacccttttgagaatgttttttgtccctttttataagacccctttgcta 4416037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 177 - 240
Target Start/End: Original strand, 54676552 - 54676615
Alignment:
Q  177 cctccgtccctaattataagacctttttgagaannnnnnnngttcctttttataagaccccttt 240  Q
    |||||||||||||||||||||||||||||||||        || ||||||||||||||||||||    
T  54676552 cctccgtccctaattataagacctttttgagaattttttttgtccctttttataagaccccttt 54676615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 172 - 241
Target Start/End: Original strand, 4035825 - 4035894
Alignment:
Q  172 tacttcctccgtccctaattataagacctttttgagaannnnnnnngttcctttttataagacccctttg 241  Q
    |||| ||||||||||||||||||||||| |||||||||        || |||||||||||||||||||||    
T  4035825 tactccctccgtccctaattataagacccttttgagaattttttttgtccctttttataagacccctttg 4035894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 172 - 241
Target Start/End: Complemental strand, 5375594 - 5375525
Alignment:
Q  172 tacttcctccgtccctaattataagacctttttgagaannnnnnnngttcctttttataagacccctttg 241  Q
    |||| ||||||||||||||||||||||| |||||||||        || |||||||||||||||||||||    
T  5375594 tactccctccgtccctaattataagacccttttgagaattttttttgtccctttttataagacccctttg 5375525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 172 - 241
Target Start/End: Complemental strand, 5743696 - 5743627
Alignment:
Q  172 tacttcctccgtccctaattataagacctttttgagaannnnnnnngttcctttttataagacccctttg 241  Q
    |||| ||||||||||||||||||||||| |||||||||        || |||||||||||||||||||||    
T  5743696 tactccctccgtccctaattataagacccttttgagaaaaaaatttgtccctttttataagacccctttg 5743627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 172 - 209
Target Start/End: Complemental strand, 25708715 - 25708678
Alignment:
Q  172 tacttcctccgtccctaattataagacctttttgagaa 209  Q
    |||| |||||||||||||||||||||||||||||||||    
T  25708715 tactccctccgtccctaattataagacctttttgagaa 25708678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 171 - 244
Target Start/End: Complemental strand, 26626040 - 26625967
Alignment:
Q  171 ctacttcctccgtccctaattataagacctttttgagaannnnnnnngttcctttttataagacccctttgcta 244  Q
    ||||| ||||||||||||||||||||||| ||||||||         || ||||||||||||||||||||||||    
T  26626040 ctactccctccgtccctaattataagacccttttgagatttttttttgtccctttttataagacccctttgcta 26625967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 171 - 240
Target Start/End: Complemental strand, 29520202 - 29520133
Alignment:
Q  171 ctacttcctccgtccctaattataagacctttttgagaannnnnnnngttcctttttataagaccccttt 240  Q
    ||||| ||||||||||||||||||||||| |||||||||        || ||||||||||||||||||||    
T  29520202 ctactacctccgtccctaattataagacccttttgagaaaaaaatttgtccctttttataagaccccttt 29520133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 172 - 241
Target Start/End: Complemental strand, 34273256 - 34273187
Alignment:
Q  172 tacttcctccgtccctaattataagacctttttgagaannnnnnnngttcctttttataagacccctttg 241  Q
    |||| ||||||||||||||||||||||| |||||||||        || |||||||||||||||||||||    
T  34273256 tactccctccgtccctaattataagacccttttgagaattttttttgtccctttttataagacccctttg 34273187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 172 - 241
Target Start/End: Original strand, 36990914 - 36990983
Alignment:
Q  172 tacttcctccgtccctaattataagacctttttgagaannnnnnnngttcctttttataagacccctttg 241  Q
    |||| |||||||| ||||||||||||||||||||||||        || |||||||||||||||||||||    
T  36990914 tactacctccgtctctaattataagacctttttgagaattttttttgtccctttttataagacccctttg 36990983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 172 - 209
Target Start/End: Complemental strand, 47228765 - 47228728
Alignment:
Q  172 tacttcctccgtccctaattataagacctttttgagaa 209  Q
    |||||||||||||||||||||||||||| |||||||||    
T  47228765 tacttcctccgtccctaattataagacccttttgagaa 47228728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 172 - 241
Target Start/End: Original strand, 47806860 - 47806929
Alignment:
Q  172 tacttcctccgtccctaattataagacctttttgagaannnnnnnngttcctttttataagacccctttg 241  Q
    |||| ||||||||||||||||||||||| |||||||||        || |||||||||||||||||||||    
T  47806860 tactccctccgtccctaattataagacccttttgagaattttttttgtccctttttataagacccctttg 47806929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 172 - 244
Target Start/End: Complemental strand, 626003 - 625932
Alignment:
Q  172 tacttcctccgtccctaattataagacctttttgagaannnnnnnngttcctttttataagacccctttgcta 244  Q
    |||| ||||||||||||||||||||||||||||| |||        || ||||||||||||||||||||||||    
T  626003 tactacctccgtccctaattataagacctttttg-gaaaaaaaattgtccctttttataagacccctttgcta 625932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 172 - 240
Target Start/End: Complemental strand, 46481426 - 46481358
Alignment:
Q  172 tacttcctccgtccctaattataagacctttttgagaannnnnnnngttcctttttataagaccccttt 240  Q
    |||| ||||| |||||||||||||||||||||||||||        || ||||||||||||||||||||    
T  46481426 tactacctccatccctaattataagacctttttgagaatttttcttgtccctttttataagaccccttt 46481358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 172 - 244
Target Start/End: Complemental strand, 49373730 - 49373658
Alignment:
Q  172 tacttcctccgtccctaattataagacctttttgagaannnnnnnngttcctttttataagacccctttgcta 244  Q
    |||| ||||||||||||||||||||||| |||||||||        |  ||||||||||||||||||||||||    
T  49373730 tactacctccgtccctaattataagacccttttgagaattttttttggccctttttataagacccctttgcta 49373658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 178 - 209
Target Start/End: Original strand, 18882357 - 18882388
Alignment:
Q  178 ctccgtccctaattataagacctttttgagaa 209  Q
    ||||||||||||||||||||||||||||||||    
T  18882357 ctccgtccctaattataagacctttttgagaa 18882388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 171 - 209
Target Start/End: Complemental strand, 32033031 - 32032993
Alignment:
Q  171 ctacttcctccgtccctaattataagacctttttgagaa 209  Q
    ||||| ||||||||||||||||||||||| |||||||||    
T  32033031 ctactccctccgtccctaattataagacccttttgagaa 32032993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 172 - 206
Target Start/End: Original strand, 39797434 - 39797468
Alignment:
Q  172 tacttcctccgtccctaattataagacctttttga 206  Q
    |||| ||||||||||||||||||||||||||||||    
T  39797434 tactacctccgtccctaattataagacctttttga 39797468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 172 - 209
Target Start/End: Complemental strand, 9328277 - 9328240
Alignment:
Q  172 tacttcctccgtccctaattataagacctttttgagaa 209  Q
    |||| ||||||||||||||||||||||| |||||||||    
T  9328277 tactccctccgtccctaattataagacccttttgagaa 9328240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 172 - 209
Target Start/End: Complemental strand, 20455218 - 20455181
Alignment:
Q  172 tacttcctccgtccctaattataagacctttttgagaa 209  Q
    |||| ||||||||||||||||||||||| |||||||||    
T  20455218 tactacctccgtccctaattataagacccttttgagaa 20455181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 172 - 209
Target Start/End: Complemental strand, 25124283 - 25124246
Alignment:
Q  172 tacttcctccgtccctaattataagacctttttgagaa 209  Q
    |||| ||||||||||||||||||||||| |||||||||    
T  25124283 tactacctccgtccctaattataagacccttttgagaa 25124246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 172 - 209
Target Start/End: Complemental strand, 28501423 - 28501386
Alignment:
Q  172 tacttcctccgtccctaattataagacctttttgagaa 209  Q
    |||| ||||||||||||||||||||||| |||||||||    
T  28501423 tactacctccgtccctaattataagacccttttgagaa 28501386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 172 - 209
Target Start/End: Original strand, 30771528 - 30771565
Alignment:
Q  172 tacttcctccgtccctaattataagacctttttgagaa 209  Q
    |||| ||||||||||||||||||||||| |||||||||    
T  30771528 tactccctccgtccctaattataagacccttttgagaa 30771565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 172 - 209
Target Start/End: Original strand, 31937076 - 31937113
Alignment:
Q  172 tacttcctccgtccctaattataagacctttttgagaa 209  Q
    |||| ||||||||||||||||||||||| |||||||||    
T  31937076 tactacctccgtccctaattataagacccttttgagaa 31937113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 172 - 209
Target Start/End: Original strand, 33413518 - 33413555
Alignment:
Q  172 tacttcctccgtccctaattataagacctttttgagaa 209  Q
    |||| ||||||||||||||||||||||| |||||||||    
T  33413518 tactccctccgtccctaattataagacccttttgagaa 33413555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 172 - 209
Target Start/End: Original strand, 44294789 - 44294826
Alignment:
Q  172 tacttcctccgtccctaattataagacctttttgagaa 209  Q
    |||| ||||||||||||||||||||||| |||||||||    
T  44294789 tactccctccgtccctaattataagacccttttgagaa 44294826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 172 - 209
Target Start/End: Complemental strand, 45742843 - 45742806
Alignment:
Q  172 tacttcctccgtccctaattataagacctttttgagaa 209  Q
    |||| ||||||||||||||||||||||| |||||||||    
T  45742843 tactccctccgtccctaattataagacccttttgagaa 45742806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 172 - 209
Target Start/End: Original strand, 49793091 - 49793128
Alignment:
Q  172 tacttcctccgtccctaattataagacctttttgagaa 209  Q
    |||| ||||||||||||||||||||||| |||||||||    
T  49793091 tactacctccgtccctaattataagacccttttgagaa 49793128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 172 - 209
Target Start/End: Original strand, 52977982 - 52978019
Alignment:
Q  172 tacttcctccgtccctaattataagacctttttgagaa 209  Q
    |||| ||||||||||||||||||||||| |||||||||    
T  52977982 tactccctccgtccctaattataagacccttttgagaa 52978019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 172 - 209
Target Start/End: Complemental strand, 53564393 - 53564356
Alignment:
Q  172 tacttcctccgtccctaattataagacctttttgagaa 209  Q
    |||| ||||||||||||||||||||||| |||||||||    
T  53564393 tactacctccgtccctaattataagacccttttgagaa 53564356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 172 - 209
Target Start/End: Original strand, 56432518 - 56432555
Alignment:
Q  172 tacttcctccgtccctaattataagacctttttgagaa 209  Q
    |||| ||||||||||||||||||||||| |||||||||    
T  56432518 tactacctccgtccctaattataagacccttttgagaa 56432555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 172 - 208
Target Start/End: Complemental strand, 24073163 - 24073127
Alignment:
Q  172 tacttcctccgtccctaattataagacctttttgaga 208  Q
    |||| ||||||||| ||||||||||||||||||||||    
T  24073163 tactacctccgtccttaattataagacctttttgaga 24073127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 172 - 208
Target Start/End: Complemental strand, 32899255 - 32899219
Alignment:
Q  172 tacttcctccgtccctaattataagacctttttgaga 208  Q
    |||| ||||||||||||||||||||||| ||||||||    
T  32899255 tactacctccgtccctaattataagacccttttgaga 32899219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 177 - 209
Target Start/End: Original strand, 41620519 - 41620551
Alignment:
Q  177 cctccgtccctaattataagacctttttgagaa 209  Q
    ||||||||||||||||||||||| |||||||||    
T  41620519 cctccgtccctaattataagacccttttgagaa 41620551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 172 - 208
Target Start/End: Complemental strand, 55563164 - 55563128
Alignment:
Q  172 tacttcctccgtccctaattataagacctttttgaga 208  Q
    |||| ||||||||||||||||||||||| ||||||||    
T  55563164 tactacctccgtccctaattataagacccttttgaga 55563128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 38; Significance: 0.000000000001; HSPs: 38)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 171 - 244
Target Start/End: Original strand, 8321924 - 8321997
Alignment:
Q  171 ctacttcctccgtccctaattataagacctttttgagaannnnnnnngttcctttttataagacccctttgcta 244  Q
    ||||| ||||||||||||||||||||||| |||||||||        || ||||||||||||||||||||||||    
T  8321924 ctactacctccgtccctaattataagacccttttgagaattttttttgtccctttttataagacccctttgcta 8321997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 172 - 241
Target Start/End: Complemental strand, 23700822 - 23700753
Alignment:
Q  172 tacttcctccgtccctaattataagacctttttgagaannnnnnnngttcctttttataagacccctttg 241  Q
    |||| |||||||||||||||||||||||||||||||||        || |||||||||||||||||||||    
T  23700822 tactccctccgtccctaattataagacctttttgagaattttttttgtccctttttataagacccctttg 23700753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 172 - 241
Target Start/End: Complemental strand, 23719277 - 23719208
Alignment:
Q  172 tacttcctccgtccctaattataagacctttttgagaannnnnnnngttcctttttataagacccctttg 241  Q
    |||| |||||||||||||||||||||||||||||||||        || |||||||||||||||||||||    
T  23719277 tactccctccgtccctaattataagacctttttgagaattttttttgtccctttttataagacccctttg 23719208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 172 - 241
Target Start/End: Complemental strand, 23737733 - 23737664
Alignment:
Q  172 tacttcctccgtccctaattataagacctttttgagaannnnnnnngttcctttttataagacccctttg 241  Q
    |||| |||||||||||||||||||||||||||||||||        || |||||||||||||||||||||    
T  23737733 tactccctccgtccctaattataagacctttttgagaattttttttgtccctttttataagacccctttg 23737664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 172 - 244
Target Start/End: Original strand, 7181350 - 7181422
Alignment:
Q  172 tacttcctccgtccctaattataagacctttttgagaannnnnnnngttcctttttataagacccctttgcta 244  Q
    |||| ||||||||||||||||||||||| |||||||||        || ||||||||||||||||||||||||    
T  7181350 tactccctccgtccctaattataagacccttttgagaaatttttttgtccctttttataagacccctttgcta 7181422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 172 - 244
Target Start/End: Original strand, 47066934 - 47067006
Alignment:
Q  172 tacttcctccgtccctaattataagacctttttgagaannnnnnnngttcctttttataagacccctttgcta 244  Q
    |||||||||||||||||||||||||||| |||||||||        || ||||||||||||||| ||||||||    
T  47066934 tacttcctccgtccctaattataagacccttttgagaatattttttgtccctttttataagaccactttgcta 47067006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 171 - 209
Target Start/End: Original strand, 26058545 - 26058583
Alignment:
Q  171 ctacttcctccgtccctaattataagacctttttgagaa 209  Q
    ||||||||||||||||||||||||||||| |||||||||    
T  26058545 ctacttcctccgtccctaattataagacccttttgagaa 26058583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 172 - 241
Target Start/End: Complemental strand, 9499534 - 9499465
Alignment:
Q  172 tacttcctccgtccctaattataagacctttttgagaannnnnnnngttcctttttataagacccctttg 241  Q
    |||| ||||||||||||||||||||||| |||||||||        || |||||||||||||||||||||    
T  9499534 tactccctccgtccctaattataagacccttttgagaattttttttgtccctttttataagacccctttg 9499465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 172 - 241
Target Start/End: Complemental strand, 12683219 - 12683150
Alignment:
Q  172 tacttcctccgtccctaattataagacctttttgagaannnnnnnngttcctttttataagacccctttg 241  Q
    |||| ||||||||||||||||||||||| |||||||||        || |||||||||||||||||||||    
T  12683219 tactccctccgtccctaattataagaccattttgagaatttttttagtccctttttataagacccctttg 12683150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 172 - 241
Target Start/End: Complemental strand, 22103966 - 22103897
Alignment:
Q  172 tacttcctccgtccctaattataagacctttttgagaannnnnnnngttcctttttataagacccctttg 241  Q
    |||| ||||||||||||||||||||||| |||||||||        || |||||||||||||||||||||    
T  22103966 tactccctccgtccctaattataagacccttttgagaattttttttgtccctttttataagacccctttg 22103897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 172 - 241
Target Start/End: Complemental strand, 25149159 - 25149090
Alignment:
Q  172 tacttcctccgtccctaattataagacctttttgagaannnnnnnngttcctttttataagacccctttg 241  Q
    |||| ||||||||||||||||||||||| |||||||||        || |||||||||||||||||||||    
T  25149159 tactccctccgtccctaattataagacccttttgagaattttttttgtccctttttataagacccctttg 25149090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 172 - 241
Target Start/End: Complemental strand, 35868120 - 35868051
Alignment:
Q  172 tacttcctccgtccctaattataagacctttttgagaannnnnnnngttcctttttataagacccctttg 241  Q
    |||| ||||||||||||||||||||||| |||||||||        || |||||||||||||||||||||    
T  35868120 tactccctccgtccctaattataagacccttttgagaattttttttgtccctttttataagacccctttg 35868051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 172 - 241
Target Start/End: Original strand, 37728713 - 37728782
Alignment:
Q  172 tacttcctccgtccctaattataagacctttttgagaannnnnnnngttcctttttataagacccctttg 241  Q
    |||| ||||||||||||||||||||||| |||||||||        || |||||||||||||||||||||    
T  37728713 tactccctccgtccctaattataagacccttttgagaatatttgttgtccctttttataagacccctttg 37728782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 172 - 241
Target Start/End: Original strand, 44543782 - 44543851
Alignment:
Q  172 tacttcctccgtccctaattataagacctttttgagaannnnnnnngttcctttttataagacccctttg 241  Q
    |||| ||||||||||||||||||||||| |||||||||        || |||||||||||||||||||||    
T  44543782 tactccctccgtccctaattataagacccttttgagaatttcttttgtccctttttataagacccctttg 44543851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 176 - 241
Target Start/End: Original strand, 46703031 - 46703096
Alignment:
Q  176 tcctccgtccctaattataagacctttttgagaannnnnnnngttcctttttataagacccctttg 241  Q
    |||||||||||||||||||||||| |||||||||        || |||||||||||||||||||||    
T  46703031 tcctccgtccctaattataagacccttttgagaattttttttgtccctttttataagacccctttg 46703096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 172 - 240
Target Start/End: Original strand, 14428610 - 14428678
Alignment:
Q  172 tacttcctccgtccctaattataagacctttttgagaannnnnnnngttcctttttataagaccccttt 240  Q
    |||| ||||||||||||||||||||||| |||||||||        || ||||||||||||||||||||    
T  14428610 tactccctccgtccctaattataagacccttttgagaaatttttttgtccctttttataagaccccttt 14428678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 172 - 244
Target Start/End: Complemental strand, 43158773 - 43158701
Alignment:
Q  172 tacttcctccgtccctaattataagacctttttgagaannnnnnnngttcctttttataagacccctttgcta 244  Q
    |||||||||||||||||||||||||| | |||||||||        || ||||||||||||| ||||||||||    
T  43158773 tacttcctccgtccctaattataagatcattttgagaaaaaaaattgtccctttttataagatccctttgcta 43158701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 172 - 240
Target Start/End: Complemental strand, 46845529 - 46845461
Alignment:
Q  172 tacttcctccgtccctaattataagacctttttgagaannnnnnnngttcctttttataagaccccttt 240  Q
    |||| ||||||||||||||||||||||| |||||||||        || ||||||||||||||||||||    
T  46845529 tactacctccgtccctaattataagacccttttgagaattttttttgtccctttttataagaccccttt 46845461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 177 - 209
Target Start/End: Complemental strand, 49127230 - 49127198
Alignment:
Q  177 cctccgtccctaattataagacctttttgagaa 209  Q
    |||||||||||||||||||||||||||||||||    
T  49127230 cctccgtccctaattataagacctttttgagaa 49127198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 171 - 209
Target Start/End: Original strand, 45252772 - 45252810
Alignment:
Q  171 ctacttcctccgtccctaattataagacctttttgagaa 209  Q
    ||||| ||||||||||||||||||||||| |||||||||    
T  45252772 ctactccctccgtccctaattataagacccttttgagaa 45252810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 172 - 241
Target Start/End: Original strand, 4024052 - 4024121
Alignment:
Q  172 tacttcctccgtccctaattataagacctttttgagaannnnnnnngttcctttttataagacccctttg 241  Q
    |||| ||||||||||||||||||||||| ||||||||         || |||||||||||||||||||||    
T  4024052 tactccctccgtccctaattataagacccttttgagatttttttttgtccctttttataagacccctttg 4024121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 172 - 209
Target Start/End: Complemental strand, 4759388 - 4759351
Alignment:
Q  172 tacttcctccgtccctaattataagacctttttgagaa 209  Q
    |||| ||||||||||||||||||||||| |||||||||    
T  4759388 tactacctccgtccctaattataagacccttttgagaa 4759351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 172 - 209
Target Start/End: Original strand, 10220933 - 10220970
Alignment:
Q  172 tacttcctccgtccctaattataagacctttttgagaa 209  Q
    |||| ||||||||||||||||||||||| |||||||||    
T  10220933 tactccctccgtccctaattataagacccttttgagaa 10220970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 172 - 209
Target Start/End: Complemental strand, 12050429 - 12050392
Alignment:
Q  172 tacttcctccgtccctaattataagacctttttgagaa 209  Q
    |||| ||||||||||||||||||||||| |||||||||    
T  12050429 tactccctccgtccctaattataagacccttttgagaa 12050392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 172 - 209
Target Start/End: Complemental strand, 17699068 - 17699031
Alignment:
Q  172 tacttcctccgtccctaattataagacctttttgagaa 209  Q
    |||| ||||||||||||||||||||||| |||||||||    
T  17699068 tactacctccgtccctaattataagaccattttgagaa 17699031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 172 - 209
Target Start/End: Original strand, 21756486 - 21756523
Alignment:
Q  172 tacttcctccgtccctaattataagacctttttgagaa 209  Q
    |||| ||||||||||||||||||||||| |||||||||    
T  21756486 tactccctccgtccctaattataagacccttttgagaa 21756523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 172 - 209
Target Start/End: Complemental strand, 24087372 - 24087335
Alignment:
Q  172 tacttcctccgtccctaattataagacctttttgagaa 209  Q
    |||| ||||||||||||||||||||||| |||||||||    
T  24087372 tactacctccgtccctaattataagacccttttgagaa 24087335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 172 - 209
Target Start/End: Complemental strand, 26593802 - 26593765
Alignment:
Q  172 tacttcctccgtccctaattataagacctttttgagaa 209  Q
    |||| ||||||||||||||||||||||| |||||||||    
T  26593802 tactccctccgtccctaattataagacccttttgagaa 26593765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 172 - 209
Target Start/End: Original strand, 36005502 - 36005539
Alignment:
Q  172 tacttcctccgtccctaattataagacctttttgagaa 209  Q
    ||||||||||||||||||||||||||  ||||||||||    
T  36005502 tacttcctccgtccctaattataagatttttttgagaa 36005539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 172 - 209
Target Start/End: Complemental strand, 41392917 - 41392880
Alignment:
Q  172 tacttcctccgtccctaattataagacctttttgagaa 209  Q
    |||| ||||||||||||||||||||||| |||||||||    
T  41392917 tactacctccgtccctaattataagacccttttgagaa 41392880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 172 - 209
Target Start/End: Original strand, 43868103 - 43868140
Alignment:
Q  172 tacttcctccgtccctaattataagacctttttgagaa 209  Q
    |||| ||||||||||||||||||||||| |||||||||    
T  43868103 tactccctccgtccctaattataagacccttttgagaa 43868140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 172 - 209
Target Start/End: Original strand, 43978160 - 43978197
Alignment:
Q  172 tacttcctccgtccctaattataagacctttttgagaa 209  Q
    |||||||||||||||||||||||||||| |||| ||||    
T  43978160 tacttcctccgtccctaattataagacccttttaagaa 43978197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 172 - 209
Target Start/End: Complemental strand, 46050023 - 46049986
Alignment:
Q  172 tacttcctccgtccctaattataagacctttttgagaa 209  Q
    |||| ||||||||||||||||||||||| |||||||||    
T  46050023 tactccctccgtccctaattataagacccttttgagaa 46049986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 172 - 209
Target Start/End: Complemental strand, 51284099 - 51284062
Alignment:
Q  172 tacttcctccgtccctaattataagacctttttgagaa 209  Q
    |||| ||||||||||||||||||||||| |||||||||    
T  51284099 tactccctccgtccctaattataagacccttttgagaa 51284062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 172 - 209
Target Start/End: Complemental strand, 53361892 - 53361855
Alignment:
Q  172 tacttcctccgtccctaattataagacctttttgagaa 209  Q
    |||| ||||||||||||||||||||||| |||||||||    
T  53361892 tactccctccgtccctaattataagaccattttgagaa 53361855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 177 - 209
Target Start/End: Original strand, 20918224 - 20918256
Alignment:
Q  177 cctccgtccctaattataagacctttttgagaa 209  Q
    ||||||||||||||||||||||| |||||||||    
T  20918224 cctccgtccctaattataagacccttttgagaa 20918256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 177 - 209
Target Start/End: Original strand, 20927186 - 20927218
Alignment:
Q  177 cctccgtccctaattataagacctttttgagaa 209  Q
    ||||||||||||||||||||||| |||||||||    
T  20927186 cctccgtccctaattataagacccttttgagaa 20927218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 177 - 209
Target Start/End: Original strand, 33976508 - 33976540
Alignment:
Q  177 cctccgtccctaattataagacctttttgagaa 209  Q
    ||||||||||||||||||||||| |||||||||    
T  33976508 cctccgtccctaattataagaccattttgagaa 33976540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 38; Significance: 0.000000000001; HSPs: 23)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 172 - 241
Target Start/End: Original strand, 5664638 - 5664707
Alignment:
Q  172 tacttcctccgtccctaattataagacctttttgagaannnnnnnngttcctttttataagacccctttg 241  Q
    |||| |||||||||||||||||||||||||||||||||        || |||||||||||||||||||||    
T  5664638 tactccctccgtccctaattataagacctttttgagaattttttttgtccctttttataagacccctttg 5664707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 172 - 244
Target Start/End: Complemental strand, 8912911 - 8912839
Alignment:
Q  172 tacttcctccgtccctaattataagacctttttgagaannnnnnnngttcctttttataagacccctttgcta 244  Q
    |||| ||||||||||||||||||||||| |||||||||        || ||||||||||||||||||||||||    
T  8912911 tactacctccgtccctaattataagacccttttgagaattttttttgtccctttttataagacccctttgcta 8912839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 172 - 241
Target Start/End: Original strand, 2438225 - 2438294
Alignment:
Q  172 tacttcctccgtccctaattataagacctttttgagaannnnnnnngttcctttttataagacccctttg 241  Q
    |||| ||||||||||||||||||||||| |||||||||        || |||||||||||||||||||||    
T  2438225 tactccctccgtccctaattataagacccttttgagaattttttttgtccctttttataagacccctttg 2438294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 172 - 209
Target Start/End: Original strand, 25624733 - 25624770
Alignment:
Q  172 tacttcctccgtccctaattataagacctttttgagaa 209  Q
    |||| |||||||||||||||||||||||||||||||||    
T  25624733 tactccctccgtccctaattataagacctttttgagaa 25624770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 172 - 241
Target Start/End: Original strand, 27560206 - 27560275
Alignment:
Q  172 tacttcctccgtccctaattataagacctttttgagaannnnnnnngttcctttttataagacccctttg 241  Q
    |||| ||||||||||||||||||||||| |||||||||        || |||||||||||||||||||||    
T  27560206 tactccctccgtccctaattataagacccttttgagaaaaatttttgtccctttttataagacccctttg 27560275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 172 - 241
Target Start/End: Complemental strand, 34883885 - 34883816
Alignment:
Q  172 tacttcctccgtccctaattataagacctttttgagaannnnnnnngttcctttttataagacccctttg 241  Q
    |||| ||||||||||||||||||||||| |||||||||        || |||||||||||||||||||||    
T  34883885 tactccctccgtccctaattataagacccttttgagaattttttttgtccctttttataagacccctttg 34883816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 172 - 241
Target Start/End: Complemental strand, 39834036 - 39833967
Alignment:
Q  172 tacttcctccgtccctaattataagacctttttgagaannnnnnnngttcctttttataagacccctttg 241  Q
    |||| |||| ||||||||||||||||||||||||||||        || |||||||||||||||||||||    
T  39834036 tactccctcagtccctaattataagacctttttgagaattttttttgtccctttttataagacccctttg 39833967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 172 - 241
Target Start/End: Original strand, 40607702 - 40607771
Alignment:
Q  172 tacttcctccgtccctaattataagacctttttgagaannnnnnnngttcctttttataagacccctttg 241  Q
    |||| ||||||||||||||||||||||| |||||||||        || |||||||||||||||||||||    
T  40607702 tactccctccgtccctaattataagacccttttgagaaatttttttgtccctttttataagacccctttg 40607771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 178 - 209
Target Start/End: Original strand, 17665529 - 17665560
Alignment:
Q  178 ctccgtccctaattataagacctttttgagaa 209  Q
    ||||||||||||||||||||||||||||||||    
T  17665529 ctccgtccctaattataagacctttttgagaa 17665560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 171 - 209
Target Start/End: Complemental strand, 7116337 - 7116299
Alignment:
Q  171 ctacttcctccgtccctaattataagacctttttgagaa 209  Q
    ||||| ||||||||||||||||||||||| |||||||||    
T  7116337 ctactacctccgtccctaattataagacccttttgagaa 7116299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 171 - 209
Target Start/End: Complemental strand, 17408332 - 17408294
Alignment:
Q  171 ctacttcctccgtccctaattataagacctttttgagaa 209  Q
    ||||| ||||||||||||||||||||||| |||||||||    
T  17408332 ctactccctccgtccctaattataagacccttttgagaa 17408294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 172 - 234
Target Start/End: Original strand, 28566151 - 28566213
Alignment:
Q  172 tacttcctccgtccctaattataagacctttttgagaannnnnnnngttcctttttataagac 234  Q
    |||| ||||||||||||||||||||||| |||||||||        |||||||||||||||||    
T  28566151 tactacctccgtccctaattataagacccttttgagaaaaaaaattgttcctttttataagac 28566213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 172 - 206
Target Start/End: Complemental strand, 29830791 - 29830757
Alignment:
Q  172 tacttcctccgtccctaattataagacctttttga 206  Q
    |||| ||||||||||||||||||||||||||||||    
T  29830791 tactacctccgtccctaattataagacctttttga 29830757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 172 - 209
Target Start/End: Original strand, 2060316 - 2060353
Alignment:
Q  172 tacttcctccgtccctaattataagacctttttgagaa 209  Q
    |||| ||||||||||||||||||||||| |||||||||    
T  2060316 tactacctccgtccctaattataagacccttttgagaa 2060353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 172 - 209
Target Start/End: Original strand, 7491844 - 7491881
Alignment:
Q  172 tacttcctccgtccctaattataagacctttttgagaa 209  Q
    |||| ||||||||||||||||||||||| |||||||||    
T  7491844 tactccctccgtccctaattataagacccttttgagaa 7491881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 172 - 209
Target Start/End: Complemental strand, 8716929 - 8716892
Alignment:
Q  172 tacttcctccgtccctaattataagacctttttgagaa 209  Q
    |||| ||||||||||||||||||||||| |||||||||    
T  8716929 tactccctccgtccctaattataagacccttttgagaa 8716892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 172 - 209
Target Start/End: Original strand, 8990204 - 8990241
Alignment:
Q  172 tacttcctccgtccctaattataagacctttttgagaa 209  Q
    |||| ||||||||||||||||||||| |||||||||||    
T  8990204 tactccctccgtccctaattataagatctttttgagaa 8990241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 172 - 209
Target Start/End: Original strand, 11201683 - 11201720
Alignment:
Q  172 tacttcctccgtccctaattataagacctttttgagaa 209  Q
    |||| ||||||||||||||||||||||| |||||||||    
T  11201683 tactccctccgtccctaattataagacccttttgagaa 11201720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 172 - 209
Target Start/End: Original strand, 20252210 - 20252247
Alignment:
Q  172 tacttcctccgtccctaattataagacctttttgagaa 209  Q
    |||| ||||||||||||||||||||||| |||||||||    
T  20252210 tactccctccgtccctaattataagacccttttgagaa 20252247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 172 - 209
Target Start/End: Complemental strand, 26322330 - 26322293
Alignment:
Q  172 tacttcctccgtccctaattataagacctttttgagaa 209  Q
    |||| ||||||||||||||||||||||| |||||||||    
T  26322330 tactacctccgtccctaattataagacccttttgagaa 26322293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 172 - 209
Target Start/End: Complemental strand, 34062702 - 34062665
Alignment:
Q  172 tacttcctccgtccctaattataagacctttttgagaa 209  Q
    |||| ||||||||||||||||||||||| |||||||||    
T  34062702 tactccctccgtccctaattataagacccttttgagaa 34062665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 172 - 209
Target Start/End: Complemental strand, 36131065 - 36131028
Alignment:
Q  172 tacttcctccgtccctaattataagacctttttgagaa 209  Q
    |||| ||||||||||||||||||||||| |||||||||    
T  36131065 tactccctccgtccctaattataagacccttttgagaa 36131028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 172 - 209
Target Start/End: Original strand, 41450516 - 41450553
Alignment:
Q  172 tacttcctccgtccctaattataagacctttttgagaa 209  Q
    |||| ||||||||||||||||||||||| |||||||||    
T  41450516 tactccctccgtccctaattataagacccttttgagaa 41450553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 37; Significance: 0.000000000005; HSPs: 28)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 172 - 244
Target Start/End: Complemental strand, 4102751 - 4102679
Alignment:
Q  172 tacttcctccgtccctaattataagacctttttgagaannnnnnnngttcctttttataagacccctttgcta 244  Q
    |||| ||||||||||||||||||||||| |||||||||        || ||||||||||||||||||||||||    
T  4102751 tactccctccgtccctaattataagacccttttgagaattttttttgtccctttttataagacccctttgcta 4102679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 171 - 241
Target Start/End: Original strand, 23541978 - 23542048
Alignment:
Q  171 ctacttcctccgtccctaattataagacctttttgagaannnnnnnngttcctttttataagacccctttg 241  Q
    ||||| ||||||||||||||||||||||| |||||||||        || |||||||||||||||||||||    
T  23541978 ctactccctccgtccctaattataagacccttttgagaattttttttgtccctttttataagacccctttg 23542048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 171 - 241
Target Start/End: Original strand, 36694853 - 36694923
Alignment:
Q  171 ctacttcctccgtccctaattataagacctttttgagaannnnnnnngttcctttttataagacccctttg 241  Q
    ||||| ||||||||||||||||||||||| |||||||||        || |||||||||||||||||||||    
T  36694853 ctactccctccgtccctaattataagacccttttgagaattttttttgtccctttttataagacccctttg 36694923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 171 - 241
Target Start/End: Original strand, 36710954 - 36711024
Alignment:
Q  171 ctacttcctccgtccctaattataagacctttttgagaannnnnnnngttcctttttataagacccctttg 241  Q
    ||||| ||||||||||||||||||||||| |||||||||        || |||||||||||||||||||||    
T  36710954 ctactccctccgtccctaattataagacccttttgagaattttttttgtccctttttataagacccctttg 36711024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 172 - 241
Target Start/End: Complemental strand, 1039418 - 1039349
Alignment:
Q  172 tacttcctccgtccctaattataagacctttttgagaannnnnnnngttcctttttataagacccctttg 241  Q
    |||| ||||||||||||||||||||||| |||||||||        || |||||||||||||||||||||    
T  1039418 tactccctccgtccctaattataagacccttttgagaattttttttgtccctttttataagacccctttg 1039349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 172 - 241
Target Start/End: Complemental strand, 1046324 - 1046255
Alignment:
Q  172 tacttcctccgtccctaattataagacctttttgagaannnnnnnngttcctttttataagacccctttg 241  Q
    |||| ||||||||||||||||||||||| |||||||||        || |||||||||||||||||||||    
T  1046324 tactccctccgtccctaattataagacccttttgagaattttttttgtccctttttataagacccctttg 1046255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 172 - 241
Target Start/End: Original strand, 11741397 - 11741466
Alignment:
Q  172 tacttcctccgtccctaattataagacctttttgagaannnnnnnngttcctttttataagacccctttg 241  Q
    |||| ||||||||||||||||||||||| |||||||||        || |||||||||||||||||||||    
T  11741397 tactccctccgtccctaattataagacccttttgagaattttttttgtccctttttataagacccctttg 11741466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 172 - 241
Target Start/End: Complemental strand, 15811269 - 15811200
Alignment:
Q  172 tacttcctccgtccctaattataagacctttttgagaannnnnnnngttcctttttataagacccctttg 241  Q
    |||| ||||||||||||||||||||||| |||||||||        || |||||||||||||||||||||    
T  15811269 tactccctccgtccctaattataagacccttttgagaattttttttgtccctttttataagacccctttg 15811200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 172 - 241
Target Start/End: Complemental strand, 37951986 - 37951917
Alignment:
Q  172 tacttcctccgtccctaattataagacctttttgagaannnnnnnngttcctttttataagacccctttg 241  Q
    |||| ||||||||||||||||||||||| |||||||||        || |||||||||||||||||||||    
T  37951986 tactccctccgtccctaattataagacccttttgagaattttttttgtccctttttataagacccctttg 37951917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 172 - 241
Target Start/End: Original strand, 39497433 - 39497502
Alignment:
Q  172 tacttcctccgtccctaattataagacctttttgagaannnnnnnngttcctttttataagacccctttg 241  Q
    |||| ||||||||||||||||||||||| |||||||||        || |||||||||||||||||||||    
T  39497433 tactccctccgtccctaattataagacccttttgagaattttttttgtccctttttataagacccctttg 39497502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 172 - 241
Target Start/End: Original strand, 45039412 - 45039481
Alignment:
Q  172 tacttcctccgtccctaattataagacctttttgagaannnnnnnngttcctttttataagacccctttg 241  Q
    |||| ||||||||||||||||||||||| |||||||||        || |||||||||||||||||||||    
T  45039412 tactccctccgtccctaattataagacccttttgagaattttttttgtccctttttataagacccctttg 45039481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 172 - 241
Target Start/End: Original strand, 49907021 - 49907090
Alignment:
Q  172 tacttcctccgtccctaattataagacctttttgagaannnnnnnngttcctttttataagacccctttg 241  Q
    |||| ||||||||||||||||||||||| |||||||||        || |||||||||||||||||||||    
T  49907021 tactccctccgtccctaattataagacccttttgagaattttttttgtccctttttataagacccctttg 49907090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 172 - 241
Target Start/End: Complemental strand, 52431211 - 52431142
Alignment:
Q  172 tacttcctccgtccctaattataagacctttttgagaannnnnnnngttcctttttataagacccctttg 241  Q
    |||| ||||||||||||||||||||||| |||||||||        || |||||||||||||||||||||    
T  52431211 tactccctccgtccctaattataagacccttttgagaattttttttgtccctttttataagacccctttg 52431142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 172 - 244
Target Start/End: Complemental strand, 7763786 - 7763714
Alignment:
Q  172 tacttcctccgtccctaattataagacctttttgagaannnnnnnngttcctttttataagacccctttgcta 244  Q
    |||| ||||||||||||||||||||||| |||||||||        || ||||||||||||| ||||||||||    
T  7763786 tactacctccgtccctaattataagacccttttgagaattttttttgtccctttttataagatccctttgcta 7763714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 172 - 244
Target Start/End: Original strand, 25509209 - 25509280
Alignment:
Q  172 tacttcctccgtccctaattataagacctttttgagaannnnnnnngttcctttttataagacccctttgcta 244  Q
    |||| ||||||||||||||||||||||| |||||||||        || ||||||||||||||||||||||||    
T  25509209 tactacctccgtccctaattataagacccttttgagaa-tttttttgtccctttttataagacccctttgcta 25509280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 177 - 240
Target Start/End: Complemental strand, 30289894 - 30289831
Alignment:
Q  177 cctccgtccctaattataagacctttttgagaannnnnnnngttcctttttataagaccccttt 240  Q
    ||||||||||||||||||||||| |||||||||        || ||||||||||||||||||||    
T  30289894 cctccgtccctaattataagacccttttgagaattttttttgtccctttttataagaccccttt 30289831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 172 - 209
Target Start/End: Original strand, 2279953 - 2279991
Alignment:
Q  172 tacttcctccgtccctaattataaga-cctttttgagaa 209  Q
    |||||||||||||||||||||||||| ||||||||||||    
T  2279953 tacttcctccgtccctaattataagaccctttttgagaa 2279991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 171 - 209
Target Start/End: Complemental strand, 43456659 - 43456621
Alignment:
Q  171 ctacttcctccgtccctaattataagacctttttgagaa 209  Q
    ||||| ||||||||||||||||||||||| |||||||||    
T  43456659 ctactacctccgtccctaattataagacccttttgagaa 43456621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 171 - 209
Target Start/End: Complemental strand, 46075905 - 46075867
Alignment:
Q  171 ctacttcctccgtccctaattataagacctttttgagaa 209  Q
    ||||| ||||||||||||||||||||||| |||||||||    
T  46075905 ctactccctccgtccctaattataagacccttttgagaa 46075867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 172 - 209
Target Start/End: Complemental strand, 943674 - 943637
Alignment:
Q  172 tacttcctccgtccctaattataagacctttttgagaa 209  Q
    |||| ||||||||||||||||||||||| |||||||||    
T  943674 tactccctccgtccctaattataagacccttttgagaa 943637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 177 - 234
Target Start/End: Original strand, 13343778 - 13343835
Alignment:
Q  177 cctccgtccctaattataagacctttttgagaannnnnnnngttcctttttataagac 234  Q
    ||||||||||||||||||||||| |||||||||        |||||||||||||||||    
T  13343778 cctccgtccctaattataagacccttttgagaatattttttgttcctttttataagac 13343835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 172 - 209
Target Start/End: Original strand, 27037269 - 27037306
Alignment:
Q  172 tacttcctccgtccctaattataagacctttttgagaa 209  Q
    |||| ||||||||||||||||||||||| |||||||||    
T  27037269 tactacctccgtccctaattataagacccttttgagaa 27037306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 172 - 209
Target Start/End: Original strand, 30290265 - 30290302
Alignment:
Q  172 tacttcctccgtccctaattataagacctttttgagaa 209  Q
    |||| ||||||||||||||||||||||| |||||||||    
T  30290265 tactccctccgtccctaattataagacccttttgagaa 30290302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 172 - 209
Target Start/End: Complemental strand, 39363231 - 39363194
Alignment:
Q  172 tacttcctccgtccctaattataagacctttttgagaa 209  Q
    |||| ||||||||||||||||||||||| |||||||||    
T  39363231 tactccctccgtccctaattataagacccttttgagaa 39363194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 172 - 209
Target Start/End: Complemental strand, 42276198 - 42276161
Alignment:
Q  172 tacttcctccgtccctaattataagacctttttgagaa 209  Q
    |||| ||||||||||||||||||||||| |||||||||    
T  42276198 tactacctccgtccctaattataagacccttttgagaa 42276161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 172 - 209
Target Start/End: Original strand, 44649629 - 44649666
Alignment:
Q  172 tacttcctccgtccctaattataagacctttttgagaa 209  Q
    |||| ||||||||||||||||||||||| |||||||||    
T  44649629 tactccctccgtccctaattataagacccttttgagaa 44649666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 172 - 205
Target Start/End: Complemental strand, 45039709 - 45039676
Alignment:
Q  172 tacttcctccgtccctaattataagacctttttg 205  Q
    |||||||||||||||||||||||||||| |||||    
T  45039709 tacttcctccgtccctaattataagacccttttg 45039676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 172 - 209
Target Start/End: Original strand, 50937779 - 50937816
Alignment:
Q  172 tacttcctccgtccctaattataagacctttttgagaa 209  Q
    |||| ||||||||||||||||||||||| |||||||||    
T  50937779 tactacctccgtccctaattataagaccattttgagaa 50937816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0339 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0339
Description:

Target: scaffold0339; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 172 - 209
Target Start/End: Complemental strand, 7177 - 7140
Alignment:
Q  172 tacttcctccgtccctaattataagacctttttgagaa 209  Q
    |||||||||||||||||||||||||||| |||||||||    
T  7177 tacttcctccgtccctaattataagacccttttgagaa 7140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 172 - 209
Target Start/End: Complemental strand, 65674 - 65637
Alignment:
Q  172 tacttcctccgtccctaattataagacctttttgagaa 209  Q
    |||| |||||||||||||||||||||||||||||||||    
T  65674 tactccctccgtccctaattataagacctttttgagaa 65637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 172 - 241
Target Start/End: Original strand, 117846 - 117915
Alignment:
Q  172 tacttcctccgtccctaattataagacctttttgagaannnnnnnngttcctttttataagacccctttg 241  Q
    |||||||||||||||||||||||||| | |||||||||        || |||||||||||||||||||||    
T  117846 tacttcctccgtccctaattataagatccttttgagaattttttttgtccctttttataagacccctttg 117915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 34; Significance: 0.0000000003; HSPs: 24)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 172 - 241
Target Start/End: Original strand, 1265949 - 1266018
Alignment:
Q  172 tacttcctccgtccctaattataagacctttttgagaannnnnnnngttcctttttataagacccctttg 241  Q
    |||| ||||||||||||||||||||||| |||||||||        || |||||||||||||||||||||    
T  1265949 tactccctccgtccctaattataagacccttttgagaattttttttgtccctttttataagacccctttg 1266018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 172 - 241
Target Start/End: Original strand, 9828393 - 9828462
Alignment:
Q  172 tacttcctccgtccctaattataagacctttttgagaannnnnnnngttcctttttataagacccctttg 241  Q
    |||| ||||||||||||||||||||||| |||||||||        || |||||||||||||||||||||    
T  9828393 tactccctccgtccctaattataagacccttttgagaattttttttgtccctttttataagacccctttg 9828462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 172 - 241
Target Start/End: Original strand, 22527692 - 22527761
Alignment:
Q  172 tacttcctccgtccctaattataagacctttttgagaannnnnnnngttcctttttataagacccctttg 241  Q
    |||| ||||||||||||||||||||||| |||||||||        || |||||||||||||||||||||    
T  22527692 tactccctccgtccctaattataagacccttttgagaattttttttgtccctttttataagacccctttg 22527761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 172 - 209
Target Start/End: Original strand, 32147294 - 32147331
Alignment:
Q  172 tacttcctccgtccctaattataagacctttttgagaa 209  Q
    |||| |||||||||||||||||||||||||||||||||    
T  32147294 tactccctccgtccctaattataagacctttttgagaa 32147331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 172 - 241
Target Start/End: Complemental strand, 40004446 - 40004377
Alignment:
Q  172 tacttcctccgtccctaattataagacctttttgagaannnnnnnngttcctttttataagacccctttg 241  Q
    |||| ||||||||||||||||||||||| |||||||||        || |||||||||||||||||||||    
T  40004446 tactccctccgtccctaattataagacccttttgagaattttttttgtccctttttataagacccctttg 40004377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 172 - 240
Target Start/End: Complemental strand, 23286511 - 23286443
Alignment:
Q  172 tacttcctccgtccctaattataagacctttttgagaannnnnnnngttcctttttataagaccccttt 240  Q
    |||| ||||||||||||||||||||||| |||||||||        || ||||||||||||||||||||    
T  23286511 tactacctccgtccctaattataagacccttttgagaattttttttgtccctttttataagaccccttt 23286443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 177 - 241
Target Start/End: Original strand, 31642192 - 31642256
Alignment:
Q  177 cctccgtccctaattataagacctttttgagaannnnnnnngttcctttttataagacccctttg 241  Q
    |||||||||||||||||||||||| ||||||||        || |||||||||||||||||||||    
T  31642192 cctccgtccctaattataagacctctttgagaaaaaaaattgtccctttttataagacccctttg 31642256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 172 - 244
Target Start/End: Complemental strand, 43060448 - 43060376
Alignment:
Q  172 tacttcctccgtccctaattataagacctttttgagaannnnnnnngttcctttttataagacccctttgcta 244  Q
    |||| ||||||||||||||||||||||| |||||||||        || |||||||||||||||| |||||||    
T  43060448 tactacctccgtccctaattataagacccttttgagaattttttttgtccctttttataagacccttttgcta 43060376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 178 - 209
Target Start/End: Original strand, 4194688 - 4194719
Alignment:
Q  178 ctccgtccctaattataagacctttttgagaa 209  Q
    ||||||||||||||||||||||||||||||||    
T  4194688 ctccgtccctaattataagacctttttgagaa 4194719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 171 - 209
Target Start/End: Original strand, 5527973 - 5528011
Alignment:
Q  171 ctacttcctccgtccctaattataagacctttttgagaa 209  Q
    ||||| ||||||||| |||||||||||||||||||||||    
T  5527973 ctactccctccgtccttaattataagacctttttgagaa 5528011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 172 - 206
Target Start/End: Complemental strand, 14570927 - 14570893
Alignment:
Q  172 tacttcctccgtccctaattataagacctttttga 206  Q
    |||| ||||||||||||||||||||||||||||||    
T  14570927 tactacctccgtccctaattataagacctttttga 14570893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 172 - 209
Target Start/End: Original strand, 3028013 - 3028050
Alignment:
Q  172 tacttcctccgtccctaattataagacctttttgagaa 209  Q
    |||| ||||||||||||||||||||||| |||||||||    
T  3028013 tactacctccgtccctaattataagacccttttgagaa 3028050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 172 - 209
Target Start/End: Complemental strand, 6673265 - 6673228
Alignment:
Q  172 tacttcctccgtccctaattataagacctttttgagaa 209  Q
    |||| ||||||||||||||||||||||| |||||||||    
T  6673265 tactccctccgtccctaattataagacccttttgagaa 6673228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 172 - 209
Target Start/End: Original strand, 8949812 - 8949849
Alignment:
Q  172 tacttcctccgtccctaattataagacctttttgagaa 209  Q
    |||| ||||||||||||||||||||||| |||||||||    
T  8949812 tactacctccgtccctaattataagacccttttgagaa 8949849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 172 - 209
Target Start/End: Original strand, 14913648 - 14913685
Alignment:
Q  172 tacttcctccgtccctaattataagacctttttgagaa 209  Q
    |||| ||||||||||||||||||||||| |||||||||    
T  14913648 tactccctccgtccctaattataagacccttttgagaa 14913685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 172 - 209
Target Start/End: Original strand, 16127259 - 16127296
Alignment:
Q  172 tacttcctccgtccctaattataagacctttttgagaa 209  Q
    |||| ||||||||||||||||||||||| |||||||||    
T  16127259 tactccctccgtccctaattataagacccttttgagaa 16127296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 172 - 209
Target Start/End: Complemental strand, 23260175 - 23260138
Alignment:
Q  172 tacttcctccgtccctaattataagacctttttgagaa 209  Q
    |||| ||||||||||||||||||||||| |||||||||    
T  23260175 tactacctccgtccctaattataagacccttttgagaa 23260138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 172 - 209
Target Start/End: Complemental strand, 26894910 - 26894873
Alignment:
Q  172 tacttcctccgtccctaattataagacctttttgagaa 209  Q
    |||| ||||||||||||||||||||||| |||||||||    
T  26894910 tactccctccgtccctaattataagacccttttgagaa 26894873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 172 - 241
Target Start/End: Original strand, 34662204 - 34662273
Alignment:
Q  172 tacttcctccgtccctaattataagacctttttgagaannnnnnnngttcctttttataagacccctttg 241  Q
    |||| ||||||||||||||||||||||| ||||||||         || |||||||||||||||||||||    
T  34662204 tactccctccgtccctaattataagacccttttgagagttttttttgtccctttttataagacccctttg 34662273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 177 - 209
Target Start/End: Complemental strand, 4985148 - 4985116
Alignment:
Q  177 cctccgtccctaattataagacctttttgagaa 209  Q
    ||||||||||||||||||| |||||||||||||    
T  4985148 cctccgtccctaattataaaacctttttgagaa 4985116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 172 - 208
Target Start/End: Original strand, 7951562 - 7951598
Alignment:
Q  172 tacttcctccgtccctaattataagacctttttgaga 208  Q
    |||| ||||||||||||||||||||||| ||||||||    
T  7951562 tactccctccgtccctaattataagacccttttgaga 7951598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 172 - 204
Target Start/End: Complemental strand, 13661156 - 13661124
Alignment:
Q  172 tacttcctccgtccctaattataagaccttttt 204  Q
    |||| ||||||||||||||||||||||||||||    
T  13661156 tactccctccgtccctaattataagaccttttt 13661124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 172 - 208
Target Start/End: Complemental strand, 19571976 - 19571940
Alignment:
Q  172 tacttcctccgtccctaattataagacctttttgaga 208  Q
    |||| ||||||||||||||||||||||| ||||||||    
T  19571976 tactacctccgtccctaattataagacccttttgaga 19571940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 172 - 208
Target Start/End: Original strand, 32964133 - 32964169
Alignment:
Q  172 tacttcctccgtccctaattataagacctttttgaga 208  Q
    |||| ||||||||||||||||||||||| ||||||||    
T  32964133 tactacctccgtccctaattataagaccattttgaga 32964169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0604 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0604
Description:

Target: scaffold0604; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 171 - 244
Target Start/End: Complemental strand, 3820 - 3748
Alignment:
Q  171 ctacttcctccgtccctaattataagacctttttgagaannnnnnnngttcctttttataagacccctttgcta 244  Q
    ||||| ||||||||||||||||||||||| |||||||||        || ||||||||||||||||||||||||    
T  3820 ctactccctccgtccctaattataagacccttttgagaa-tttttttgtccctttttataagacccctttgcta 3748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0161 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0161
Description:

Target: scaffold0161; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 172 - 244
Target Start/End: Original strand, 3438 - 3509
Alignment:
Q  172 tacttcctccgtccctaattataagacctttttgagaannnnnnnngttcctttttataagacccctttgcta 244  Q
    |||| ||||||||||||||||||||||| |||||||||        || ||||||||||||||||||||||||    
T  3438 tactacctccgtccctaattataagacccttttgagaa-tttttttgtccctttttataagacccctttgcta 3509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0674 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0674
Description:

Target: scaffold0674; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 172 - 209
Target Start/End: Original strand, 5151 - 5188
Alignment:
Q  172 tacttcctccgtccctaattataagacctttttgagaa 209  Q
    |||| ||||||||||||||||||||||| |||||||||    
T  5151 tactacctccgtccctaattataagacccttttgagaa 5188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0549 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0549
Description:

Target: scaffold0549; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 172 - 209
Target Start/End: Complemental strand, 10219 - 10182
Alignment:
Q  172 tacttcctccgtccctaattataagacctttttgagaa 209  Q
    |||| ||||||||||||||||||||||| |||||||||    
T  10219 tactacctccgtccctaattataagacccttttgagaa 10182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0240 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0240
Description:

Target: scaffold0240; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 172 - 209
Target Start/End: Original strand, 18497 - 18534
Alignment:
Q  172 tacttcctccgtccctaattataagacctttttgagaa 209  Q
    |||| ||||||||||||||||||||||| |||||||||    
T  18497 tactacctccgtccctaattataagacccttttgagaa 18534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0122 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0122
Description:

Target: scaffold0122; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 172 - 209
Target Start/End: Original strand, 12065 - 12102
Alignment:
Q  172 tacttcctccgtccctaattataagacctttttgagaa 209  Q
    |||| ||||||||||||||||||||||| |||||||||    
T  12065 tactccctccgtccctaattataagacccttttgagaa 12102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0107 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0107
Description:

Target: scaffold0107; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 172 - 209
Target Start/End: Original strand, 48654 - 48691
Alignment:
Q  172 tacttcctccgtccctaattataagacctttttgagaa 209  Q
    |||| ||||||||||||||||||||||| |||||||||    
T  48654 tactacctccgtccctaattataagacccttttgagaa 48691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0039 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0039
Description:

Target: scaffold0039; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 172 - 209
Target Start/End: Complemental strand, 104098 - 104061
Alignment:
Q  172 tacttcctccgtccctaattataagacctttttgagaa 209  Q
    |||| ||||||||||||||||||||| |||||||||||    
T  104098 tactacctccgtccctaattataagatctttttgagaa 104061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 172 - 209
Target Start/End: Complemental strand, 51719 - 51682
Alignment:
Q  172 tacttcctccgtccctaattataagacctttttgagaa 209  Q
    |||| ||||||||||||||||||||||| |||||||||    
T  51719 tactccctccgtccctaattataagacccttttgagaa 51682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 172 - 209
Target Start/End: Original strand, 47640 - 47677
Alignment:
Q  172 tacttcctccgtccctaattataagacctttttgagaa 209  Q
    |||| ||||||||||||||||||||||| |||||||||    
T  47640 tactccctccgtccctaattataagacccttttgagaa 47677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 172 - 209
Target Start/End: Complemental strand, 259159 - 259122
Alignment:
Q  172 tacttcctccgtccctaattataagacctttttgagaa 209  Q
    |||| ||||||||||||||||||||||| |||||||||    
T  259159 tactccctccgtccctaattataagacccttttgagaa 259122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University