View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF3331_high_15 (Length: 239)
Name: NF3331_high_15
Description: NF3331
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3331_high_15 |
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Alignment Details
Target: chr1 (Bit Score: 219; Significance: 1e-120; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 219; E-Value: 1e-120
Query Start/End: Original strand, 1 - 223
Target Start/End: Complemental strand, 46303097 - 46302875
Alignment:
| Q |
1 |
attactaatacatgcatattttttgactcaatgcatacacatccttggaaaaaataggcagtttaattaatcactatgcttgtgcaaattggaagtcaaa |
100 |
Q |
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| T |
46303097 |
attactaatacatgcatattttttgactcaatgcatacacatccttggaaaaaataggcagtttaattaatcactatgcttgtgcaaattggaagtcaaa |
46302998 |
T |
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| Q |
101 |
agcagcacctcacattgacaaaatattggattaaaggaaaattttcctttaaattacactatttatatcaataaacaaaattacactataaaattctaat |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |
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| T |
46302997 |
agcagcacctcacattgacaaaatattggattaaaggaaaattttcctttaaattacactatttatatcaataatcaaaattacactataaaattctaat |
46302898 |
T |
|
| Q |
201 |
tgcagtaaactatatagacattg |
223 |
Q |
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||||||||||||||||||||||| |
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| T |
46302897 |
tgcagtaaactatatagacattg |
46302875 |
T |
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