View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF3334_low_14 (Length: 243)
Name: NF3334_low_14
Description: NF3334
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3334_low_14 |
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Alignment Details
Target: chr1 (Bit Score: 173; Significance: 4e-93; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 173; E-Value: 4e-93
Query Start/End: Original strand, 31 - 203
Target Start/End: Complemental strand, 46863980 - 46863808
Alignment:
| Q |
31 |
ttggccaacttttatttaccaagaggagctattccttaaactttatgtgcgcctacaaacttgcacattacatgcttatcctatccatttattccttttc |
130 |
Q |
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| T |
46863980 |
ttggccaacttttatttaccaagaggagctattccttaaactttatgtgcgcctacaaacttgcacattacatgcttatcctatccatttattccttttc |
46863881 |
T |
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| Q |
131 |
aaaatccaaaaatatatttattattctttttgtttgtttacactgttcttcaatatttattgtcctacataat |
203 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
46863880 |
aaaatccaaaaatatatttattattctttttgtttgtttacactgttcttcaatatttattgtcctacataat |
46863808 |
T |
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