View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF3336_low_14 (Length: 210)

Name: NF3336_low_14
Description: NF3336
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF3336_low_14
NF3336_low_14
[»] chr5 (36 HSPs)
chr5 (1-210)||(37397546-37397761)
chr5 (161-210)||(25750760-25750809)
chr5 (156-210)||(5067295-5067349)
chr5 (156-210)||(13108598-13108652)
chr5 (156-210)||(22392695-22392749)
chr5 (156-210)||(25586926-25586980)
chr5 (156-210)||(32059589-32059643)
chr5 (153-210)||(3715058-3715115)
chr5 (161-210)||(4603776-4603825)
chr5 (161-210)||(8484810-8484859)
chr5 (161-206)||(27487708-27487753)
chr5 (161-210)||(38631110-38631159)
chr5 (161-209)||(19145561-19145609)
chr5 (154-206)||(23270675-23270727)
chr5 (161-209)||(36954817-36954865)
chr5 (163-210)||(38684209-38684256)
chr5 (156-206)||(204177-204227)
chr5 (156-210)||(11926651-11926705)
chr5 (155-209)||(12317300-12317354)
chr5 (156-210)||(13038603-13038657)
chr5 (156-210)||(15641254-15641308)
chr5 (156-210)||(31288095-31288149)
chr5 (156-210)||(34049816-34049870)
chr5 (161-205)||(10399772-10399816)
chr5 (161-209)||(22253295-22253343)
chr5 (166-210)||(33709650-33709694)
chr5 (157-208)||(2499329-2499380)
chr5 (156-210)||(1827679-1827733)
chr5 (156-210)||(34310136-34310190)
chr5 (156-205)||(15931053-15931102)
chr5 (161-210)||(15971271-15971320)
chr5 (156-209)||(27498881-27498934)
chr5 (161-206)||(42006792-42006837)
chr5 (168-205)||(42193491-42193528)
chr5 (161-209)||(930635-930683)
chr5 (156-208)||(30485822-30485874)
[»] scaffold0015 (1 HSPs)
scaffold0015 (64-153)||(21854-21948)
[»] chr8 (34 HSPs)
chr8 (156-210)||(24018380-24018434)
chr8 (156-210)||(28193472-28193526)
chr8 (156-210)||(42643267-42643321)
chr8 (161-209)||(34694726-34694774)
chr8 (155-210)||(2618183-2618238)
chr8 (155-210)||(18532104-18532159)
chr8 (156-210)||(3734772-3734826)
chr8 (156-210)||(32879277-32879331)
chr8 (156-210)||(34237804-34237858)
chr8 (161-210)||(19471612-19471661)
chr8 (161-210)||(19542536-19542585)
chr8 (161-210)||(19590111-19590160)
chr8 (156-208)||(4718643-4718695)
chr8 (161-209)||(36848899-36848947)
chr8 (156-210)||(20305906-20305960)
chr8 (156-210)||(21092539-21092593)
chr8 (156-210)||(39349254-39349308)
chr8 (161-210)||(15259555-15259604)
chr8 (161-210)||(27746484-27746533)
chr8 (154-210)||(7558092-7558148)
chr8 (161-209)||(28908824-28908872)
chr8 (161-209)||(34639356-34639404)
chr8 (161-210)||(264548-264597)
chr8 (161-210)||(651324-651373)
chr8 (161-210)||(837059-837108)
chr8 (161-210)||(8042657-8042706)
chr8 (161-210)||(21667553-21667602)
chr8 (156-209)||(26168998-26169051)
chr8 (164-205)||(41070767-41070808)
chr8 (161-202)||(42328008-42328049)
chr8 (146-205)||(24999230-24999287)
chr8 (155-203)||(28088283-28088331)
chr8 (161-209)||(28964036-28964084)
chr8 (161-205)||(39317023-39317067)
[»] scaffold0028 (1 HSPs)
scaffold0028 (154-209)||(27768-27823)
[»] chr7 (44 HSPs)
chr7 (161-208)||(8435846-8435893)
chr7 (156-210)||(10091186-10091240)
chr7 (156-209)||(27312150-27312203)
chr7 (155-210)||(2344296-2344351)
chr7 (155-206)||(31197588-31197639)
chr7 (155-210)||(40543059-40543114)
chr7 (156-210)||(2751269-2751323)
chr7 (156-210)||(7176011-7176065)
chr7 (156-210)||(7275275-7275329)
chr7 (156-210)||(18044105-18044159)
chr7 (156-210)||(21217982-21218036)
chr7 (156-210)||(23854394-23854448)
chr7 (156-210)||(32849589-32849643)
chr7 (161-210)||(2103058-2103107)
chr7 (161-210)||(13332572-13332621)
chr7 (161-210)||(22119891-22119940)
chr7 (161-210)||(28003839-28003888)
chr7 (154-209)||(31713045-31713100)
chr7 (156-210)||(17212051-17212105)
chr7 (156-206)||(22638290-22638340)
chr7 (156-210)||(39145801-39145855)
chr7 (161-210)||(7799981-7800030)
chr7 (156-209)||(11997847-11997900)
chr7 (161-210)||(28089819-28089868)
chr7 (156-205)||(28646967-28647016)
chr7 (161-209)||(21574253-21574301)
chr7 (161-209)||(42814867-42814915)
chr7 (174-208)||(24686132-24686166)
chr7 (156-210)||(25333417-25333471)
chr7 (156-206)||(27009357-27009407)
chr7 (167-209)||(42913663-42913705)
chr7 (161-209)||(3951140-3951189)
chr7 (21-73)||(16650692-16650745)
chr7 (21-73)||(17625052-17625105)
chr7 (161-210)||(21835154-21835203)
chr7 (156-209)||(40332097-40332150)
chr7 (161-209)||(9683829-9683877)
chr7 (161-209)||(12211685-12211733)
chr7 (161-209)||(19421234-19421282)
chr7 (156-208)||(21370595-21370647)
chr7 (174-210)||(22299865-22299901)
chr7 (165-209)||(22696327-22696371)
chr7 (161-209)||(23330889-23330937)
chr7 (173-209)||(31481062-31481098)
[»] chr3 (37 HSPs)
chr3 (155-210)||(48977381-48977436)
chr3 (156-210)||(21362937-21362991)
chr3 (156-210)||(25289863-25289917)
chr3 (156-210)||(40133598-40133652)
chr3 (156-210)||(40940819-40940873)
chr3 (155-210)||(30257617-30257672)
chr3 (155-210)||(45529903-45529958)
chr3 (156-210)||(7485674-7485728)
chr3 (156-210)||(30807302-30807356)
chr3 (156-210)||(34492724-34492778)
chr3 (156-210)||(35492905-35492959)
chr3 (156-210)||(46576342-46576396)
chr3 (161-210)||(25344206-25344255)
chr3 (161-210)||(25379760-25379809)
chr3 (161-210)||(52821784-52821833)
chr3 (161-210)||(53424325-53424374)
chr3 (154-206)||(18177040-18177092)
chr3 (166-210)||(32151428-32151472)
chr3 (156-210)||(7470364-7470418)
chr3 (156-210)||(8456299-8456353)
chr3 (156-210)||(9842915-9842969)
chr3 (156-210)||(31537987-31538041)
chr3 (156-210)||(45272565-45272619)
chr3 (155-209)||(50582985-50583039)
chr3 (161-210)||(52455798-52455847)
chr3 (154-209)||(4252546-4252601)
chr3 (163-210)||(26174114-26174161)
chr3 (156-210)||(29915418-29915472)
chr3 (156-210)||(29964571-29964625)
chr3 (156-210)||(49258411-49258465)
chr3 (161-206)||(24703703-24703748)
chr3 (169-210)||(26108299-26108340)
chr3 (156-205)||(55371439-55371488)
chr3 (161-205)||(4462632-4462676)
chr3 (166-210)||(15566648-15566692)
chr3 (160-196)||(26535036-26535072)
chr3 (174-210)||(53234059-53234095)
[»] chr2 (18 HSPs)
chr2 (154-209)||(25293158-25293213)
chr2 (156-210)||(11941359-11941413)
chr2 (156-210)||(44946202-44946256)
chr2 (155-210)||(18976574-18976629)
chr2 (156-210)||(15037953-15038007)
chr2 (161-210)||(40997499-40997548)
chr2 (156-210)||(24195998-24196052)
chr2 (156-210)||(33827722-33827776)
chr2 (161-210)||(4852557-4852606)
chr2 (161-210)||(44976303-44976352)
chr2 (161-209)||(918849-918897)
chr2 (161-209)||(8192501-8192549)
chr2 (154-210)||(32845083-32845139)
chr2 (161-210)||(17324765-17324814)
chr2 (156-209)||(27269500-27269553)
chr2 (156-209)||(30466980-30467033)
chr2 (161-209)||(14946778-14946826)
chr2 (174-210)||(27290600-27290636)
[»] scaffold0068 (1 HSPs)
scaffold0068 (156-210)||(41793-41847)
[»] chr1 (27 HSPs)
chr1 (156-210)||(27455015-27455069)
chr1 (156-210)||(46607804-46607858)
chr1 (161-206)||(52135129-52135174)
chr1 (154-210)||(4621386-4621442)
chr1 (156-210)||(7197395-7197449)
chr1 (156-210)||(8077641-8077695)
chr1 (156-210)||(24674387-24674441)
chr1 (156-210)||(34778336-34778390)
chr1 (161-210)||(1378744-1378793)
chr1 (161-208)||(2272343-2272390)
chr1 (155-210)||(20487339-20487394)
chr1 (156-210)||(15059551-15059605)
chr1 (153-210)||(1378889-1378946)
chr1 (156-209)||(32729539-32729592)
chr1 (161-210)||(46113551-46113600)
chr1 (160-200)||(1095154-1095194)
chr1 (156-192)||(8879260-8879296)
chr1 (161-209)||(24216977-24217025)
chr1 (154-210)||(29057486-29057542)
chr1 (161-209)||(37349522-37349570)
chr1 (155-207)||(47091683-47091735)
chr1 (175-210)||(17935782-17935817)
chr1 (156-210)||(7766876-7766930)
chr1 (156-206)||(23232418-23232468)
chr1 (161-210)||(24122022-24122071)
chr1 (156-209)||(25496638-25496691)
chr1 (161-209)||(9926298-9926346)
[»] chr6 (21 HSPs)
chr6 (161-209)||(9843937-9843985)
chr6 (155-210)||(9238968-9239023)
chr6 (156-210)||(11007159-11007213)
chr6 (156-210)||(12591631-12591685)
chr6 (156-210)||(15360247-15360301)
chr6 (156-210)||(22576061-22576115)
chr6 (156-209)||(28672061-28672114)
chr6 (161-209)||(8479311-8479359)
chr6 (162-210)||(11448871-11448919)
chr6 (155-210)||(13753233-13753288)
chr6 (156-210)||(654295-654349)
chr6 (156-206)||(34147340-34147390)
chr6 (156-206)||(34159956-34160006)
chr6 (156-209)||(3222784-3222837)
chr6 (21-73)||(3386570-3386623)
chr6 (156-209)||(9208246-9208299)
chr6 (161-210)||(21982469-21982518)
chr6 (156-209)||(33499468-33499521)
chr6 (155-210)||(17081203-17081258)
chr6 (177-210)||(17706456-17706489)
chr6 (156-205)||(21148664-21148713)
[»] chr4 (29 HSPs)
chr4 (154-209)||(40059002-40059057)
chr4 (155-210)||(46714385-46714440)
chr4 (156-210)||(25852208-25852262)
chr4 (156-210)||(32986191-32986245)
chr4 (156-210)||(34722164-34722218)
chr4 (156-210)||(54127491-54127545)
chr4 (161-210)||(20566348-20566397)
chr4 (161-210)||(51535612-51535661)
chr4 (161-209)||(34835528-34835576)
chr4 (161-209)||(42245745-42245793)
chr4 (155-210)||(52983612-52983667)
chr4 (156-210)||(1985830-1985884)
chr4 (156-206)||(5609355-5609405)
chr4 (156-210)||(19660681-19660735)
chr4 (160-210)||(32942368-32942418)
chr4 (156-210)||(33696428-33696482)
chr4 (161-210)||(43719214-43719263)
chr4 (166-210)||(35229172-35229216)
chr4 (156-207)||(44343507-44343559)
chr4 (162-210)||(55961891-55961939)
chr4 (161-208)||(13873446-13873493)
chr4 (155-210)||(34844907-34844962)
chr4 (164-210)||(27528944-27528990)
chr4 (156-206)||(35674894-35674944)
chr4 (156-209)||(41621746-41621799)
chr4 (160-208)||(9646367-9646415)
chr4 (163-203)||(10125783-10125823)
chr4 (161-209)||(13550207-13550255)
chr4 (161-205)||(40252297-40252341)
[»] scaffold0576 (1 HSPs)
scaffold0576 (156-210)||(5231-5285)
[»] scaffold0240 (1 HSPs)
scaffold0240 (156-210)||(12903-12957)
[»] scaffold0217 (1 HSPs)
scaffold0217 (156-210)||(7458-7512)
[»] scaffold0199 (1 HSPs)
scaffold0199 (156-210)||(8556-8610)
[»] scaffold0049 (1 HSPs)
scaffold0049 (156-210)||(66756-66810)
[»] scaffold0623 (1 HSPs)
scaffold0623 (161-210)||(1205-1254)
[»] scaffold0459 (1 HSPs)
scaffold0459 (161-210)||(10842-10891)
[»] scaffold0366 (2 HSPs)
scaffold0366 (161-210)||(9448-9497)
scaffold0366 (161-210)||(12149-12198)
[»] scaffold0460 (1 HSPs)
scaffold0460 (155-210)||(8328-8383)
[»] scaffold0328 (1 HSPs)
scaffold0328 (156-210)||(14985-15039)
[»] scaffold0026 (1 HSPs)
scaffold0026 (156-210)||(97515-97569)
[»] scaffold0051 (1 HSPs)
scaffold0051 (161-210)||(53020-53069)
[»] scaffold0070 (1 HSPs)
scaffold0070 (156-208)||(40319-40371)


Alignment Details
Target: chr5 (Bit Score: 143; Significance: 3e-75; HSPs: 36)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 1 - 210
Target Start/End: Original strand, 37397546 - 37397761
Alignment:
Q  1 ttgcgtacttttgtataaattgaattgatttttaaaagacatgcttaccat-aagcaaatgaatgtttttaaaaggtattgagaatgattgaatgaatga 99  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    |||    
T  37397546 ttgcgtacttttgtataaattgaattgatttttcaaagacatgcttaccattaagcaaatgaatgtttttaaaaggtattgagaatgattgaa----tga 37397641  T
Q  100 atgtggtaaatgagaatgattaagcaattttcaacaaacaattgtgtta---------aaatgtcaacctatttggggttggtctagtggttgacttggg 190  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||         ||||||||||||||||||||||||||||||||||| |||| |    
T  37397642 atgtggtaaatgagaatgattaagcaattttcaacaaacaatagtgttaaaatgcaccaaatgtcaacctatttggggttggtctagtggttggcttgtg 37397741  T
Q  191 attttggagtttgctcctcc 210  Q
    || |||||||||||||||||    
T  37397742 atcttggagtttgctcctcc 37397761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 161 - 210
Target Start/End: Complemental strand, 25750809 - 25750760
Alignment:
Q  161 atttggggttggtctagtggttgacttgggattttggagtttgctcctcc 210  Q
    |||||||||||| ||||||||||||||||||| |||||||||||||||||    
T  25750809 atttggggttggcctagtggttgacttgggatcttggagtttgctcctcc 25750760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 156 - 210
Target Start/End: Original strand, 5067295 - 5067349
Alignment:
Q  156 aacctatttggggttggtctagtggttgacttgggattttggagtttgctcctcc 210  Q
    |||| |||||| ||||||||||||||||||||||||| || ||||||||||||||    
T  5067295 aacccatttggagttggtctagtggttgacttgggatcttcgagtttgctcctcc 5067349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 156 - 210
Target Start/End: Complemental strand, 13108652 - 13108598
Alignment:
Q  156 aacctatttggggttggtctagtggttgacttgggattttggagtttgctcctcc 210  Q
    |||| |||||||||||| |||||||||| |||||||| |||||||||||||||||    
T  13108652 aacccatttggggttggcctagtggttggcttgggatcttggagtttgctcctcc 13108598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 156 - 210
Target Start/End: Original strand, 22392695 - 22392749
Alignment:
Q  156 aacctatttggggttggtctagtggttgacttgggattttggagtttgctcctcc 210  Q
    |||| |||||||||||| |||||||||| |||||||| |||||||||||||||||    
T  22392695 aacccatttggggttggcctagtggttggcttgggatcttggagtttgctcctcc 22392749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 156 - 210
Target Start/End: Original strand, 25586926 - 25586980
Alignment:
Q  156 aacctatttggggttggtctagtggttgacttgggattttggagtttgctcctcc 210  Q
    |||| |||||||||||| |||||||||| |||||||| |||||||||||||||||    
T  25586926 aacccatttggggttggcctagtggttggcttgggatcttggagtttgctcctcc 25586980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 156 - 210
Target Start/End: Complemental strand, 32059643 - 32059589
Alignment:
Q  156 aacctatttggggttggtctagtggttgacttgggattttggagtttgctcctcc 210  Q
    |||| |||||||||||| |||||||||| |||||||| |||||||||||||||||    
T  32059643 aacccatttggggttggcctagtggttggcttgggatcttggagtttgctcctcc 32059589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 153 - 210
Target Start/End: Complemental strand, 3715115 - 3715058
Alignment:
Q  153 gtcaacctatttggggttggtctagtggttgacttgggattttggagtttgctcctcc 210  Q
    ||||||| |||||||||||| ||||||||||  ||||||| |||||||||||||||||    
T  3715115 gtcaaccaatttggggttggcctagtggttggtttgggatcttggagtttgctcctcc 3715058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 161 - 210
Target Start/End: Original strand, 4603776 - 4603825
Alignment:
Q  161 atttggggttggtctagtggttgacttgggattttggagtttgctcctcc 210  Q
    |||||||||||| |||||||||| |||||||| |||||||||||||||||    
T  4603776 atttggggttggcctagtggttggcttgggatcttggagtttgctcctcc 4603825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 161 - 210
Target Start/End: Complemental strand, 8484859 - 8484810
Alignment:
Q  161 atttggggttggtctagtggttgacttgggattttggagtttgctcctcc 210  Q
    |||||||||||| |||||||||| |||||||| |||||||||||||||||    
T  8484859 atttggggttggcctagtggttggcttgggatcttggagtttgctcctcc 8484810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 161 - 206
Target Start/End: Complemental strand, 27487753 - 27487708
Alignment:
Q  161 atttggggttggtctagtggttgacttgggattttggagtttgctc 206  Q
    |||||||||||| ||||||||||| |||||||||||||||||||||    
T  27487753 atttggggttggcctagtggttgatttgggattttggagtttgctc 27487708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 161 - 210
Target Start/End: Complemental strand, 38631159 - 38631110
Alignment:
Q  161 atttggggttggtctagtggttgacttgggattttggagtttgctcctcc 210  Q
    |||||||||||| |||||||||| |||||||| |||||||||||||||||    
T  38631159 atttggggttggcctagtggttggcttgggatcttggagtttgctcctcc 38631110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 161 - 209
Target Start/End: Complemental strand, 19145609 - 19145561
Alignment:
Q  161 atttggggttggtctagtggttgacttgggattttggagtttgctcctc 209  Q
    |||||||||||| ||||||||||||||||||| ||||||| ||||||||    
T  19145609 atttggggttggcctagtggttgacttgggatcttggagtatgctcctc 19145561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 154 - 206
Target Start/End: Complemental strand, 23270727 - 23270675
Alignment:
Q  154 tcaacctatttggggttggtctagtggttgacttgggattttggagtttgctc 206  Q
    |||||| |||||||||||| |||||||||| |||||||| |||||||||||||    
T  23270727 tcaacccatttggggttggcctagtggttggcttgggatcttggagtttgctc 23270675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 161 - 209
Target Start/End: Original strand, 36954817 - 36954865
Alignment:
Q  161 atttggggttggtctagtggttgacttgggattttggagtttgctcctc 209  Q
    |||||||||||| |||||||||| |||||||| ||||||||||||||||    
T  36954817 atttggggttggcctagtggttgccttgggatcttggagtttgctcctc 36954865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 163 - 210
Target Start/End: Original strand, 38684209 - 38684256
Alignment:
Q  163 ttggggttggtctagtggttgacttgggattttggagtttgctcctcc 210  Q
    |||||||||| | ||||||||||||||||| |||||||||||||||||    
T  38684209 ttggggttggcccagtggttgacttgggatcttggagtttgctcctcc 38684256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 156 - 206
Target Start/End: Complemental strand, 204227 - 204177
Alignment:
Q  156 aacctatttggggttggtctagtggttgacttgggattttggagtttgctc 206  Q
    ||||| ||||| ||||||||||||||||||||| ||| |||||||||||||    
T  204227 aacctctttggagttggtctagtggttgacttgtgatcttggagtttgctc 204177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 156 - 210
Target Start/End: Complemental strand, 11926705 - 11926651
Alignment:
Q  156 aacctatttggggttggtctagtggttgacttgggattttggagtttgctcctcc 210  Q
    |||| |||||||||||| ||||||||||  ||||||| |||||||||||||||||    
T  11926705 aacccatttggggttggcctagtggttggtttgggatcttggagtttgctcctcc 11926651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 155 - 209
Target Start/End: Complemental strand, 12317354 - 12317300
Alignment:
Q  155 caacctatttggggttggtctagtggttgacttgggattttggagtttgctcctc 209  Q
    ||||| |||||||||||| |||||||||| ||||| || ||||||||||||||||    
T  12317354 caacccatttggggttggcctagtggttggcttggaatcttggagtttgctcctc 12317300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 156 - 210
Target Start/End: Complemental strand, 13038657 - 13038603
Alignment:
Q  156 aacctatttggggttggtctagtggttgacttgggattttggagtttgctcctcc 210  Q
    |||| |||||||||||| ||||||||||  ||||||| |||||||||||||||||    
T  13038657 aacccatttggggttggcctagtggttggtttgggatcttggagtttgctcctcc 13038603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 156 - 210
Target Start/End: Complemental strand, 15641308 - 15641254
Alignment:
Q  156 aacctatttggggttggtctagtggttgacttgggattttggagtttgctcctcc 210  Q
    |||| |||||||||| | |||||||||| |||||||| |||||||||||||||||    
T  15641308 aacccatttggggttagcctagtggttggcttgggatcttggagtttgctcctcc 15641254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 156 - 210
Target Start/End: Complemental strand, 31288149 - 31288095
Alignment:
Q  156 aacctatttggggttggtctagtggttgacttgggattttggagtttgctcctcc 210  Q
    |||| |||| ||||||| |||||||||| |||||||| |||||||||||||||||    
T  31288149 aacccattttgggttggcctagtggttggcttgggatcttggagtttgctcctcc 31288095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 156 - 210
Target Start/End: Original strand, 34049816 - 34049870
Alignment:
Q  156 aacctatttggggttggtctagtggttgacttgggattttggagtttgctcctcc 210  Q
    |||| |||||||||||| ||||| |||| |||||||| |||||||||||||||||    
T  34049816 aacccatttggggttgggctagtagttggcttgggatcttggagtttgctcctcc 34049870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 161 - 205
Target Start/End: Original strand, 10399772 - 10399816
Alignment:
Q  161 atttggggttggtctagtggttgacttgggattttggagtttgct 205  Q
    |||||| |||||||||||||||||||| |||| ||||||||||||    
T  10399772 atttggtgttggtctagtggttgactttggatcttggagtttgct 10399816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 161 - 209
Target Start/End: Complemental strand, 22253343 - 22253295
Alignment:
Q  161 atttggggttggtctagtggttgacttgggattttggagtttgctcctc 209  Q
    ||||||||||||||||||||||| |||||||| || || ||||||||||    
T  22253343 atttggggttggtctagtggttggcttgggatctttgactttgctcctc 22253295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 166 - 210
Target Start/End: Complemental strand, 33709694 - 33709650
Alignment:
Q  166 gggttggtctagtggttgacttgggattttggagtttgctcctcc 210  Q
    ||||||| |||||||||| |||||||| |||||||||||||||||    
T  33709694 gggttggcctagtggttggcttgggatcttggagtttgctcctcc 33709650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 157 - 208
Target Start/End: Complemental strand, 2499380 - 2499329
Alignment:
Q  157 acctatttggggttggtctagtggttgacttgggattttggagtttgctcct 208  Q
    ||||||||||||||||  |||||| ||||||||||| ||||| |||||||||    
T  2499380 acctatttggggttggcttagtggctgacttgggatcttggaatttgctcct 2499329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 156 - 210
Target Start/End: Complemental strand, 1827733 - 1827679
Alignment:
Q  156 aacctatttggggttggtctagtggttgacttgggattttggagtttgctcctcc 210  Q
    |||| |||||||||||  |||||||||| |||| ||| |||||||||||||||||    
T  1827733 aacccatttggggttgacctagtggttggcttgagatcttggagtttgctcctcc 1827679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 156 - 210
Target Start/End: Original strand, 34310136 - 34310190
Alignment:
Q  156 aacctatttggggttggtctagtggttgacttgggattttggagtttgctcctcc 210  Q
    |||| |||||||||||| |||||||| | ||||| || |||||||||||||||||    
T  34310136 aacccatttggggttggcctagtggtcggcttggaatcttggagtttgctcctcc 34310190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 156 - 205
Target Start/End: Original strand, 15931053 - 15931102
Alignment:
Q  156 aacctatttggggttggtctagtggttgacttgggattttggagtttgct 205  Q
    |||| |||||||||||| |||||||||  |||||||| ||||||||||||    
T  15931053 aacccatttggggttggcctagtggttagcttgggatcttggagtttgct 15931102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 161 - 210
Target Start/End: Complemental strand, 15971320 - 15971271
Alignment:
Q  161 atttggggttggtctagtggttgacttgggattttggagtttgctcctcc 210  Q
    |||| |||||||  ||||||||| |||||||| |||||||||||||||||    
T  15971320 atttagggttggcttagtggttggcttgggatcttggagtttgctcctcc 15971271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 156 - 209
Target Start/End: Complemental strand, 27498934 - 27498881
Alignment:
Q  156 aacctatttggggttggtctagtggttgacttgggattttggagtttgctcctc 209  Q
    |||| |||||||||||  |||||||||| ||||| || ||||||||||||||||    
T  27498934 aacccatttggggttgacctagtggttggcttggaatcttggagtttgctcctc 27498881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 161 - 206
Target Start/End: Original strand, 42006792 - 42006837
Alignment:
Q  161 atttggggttggtctagtggttgacttgggattttggagtttgctc 206  Q
    |||||||||||| |||||||||| |||| ||| |||||||||||||    
T  42006792 atttggggttgggctagtggttggcttgagatcttggagtttgctc 42006837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 168 - 205
Target Start/End: Original strand, 42193491 - 42193528
Alignment:
Q  168 gttggtctagtggttgacttgggattttggagtttgct 205  Q
    ||||| ||||||||||||||||||| ||||||||||||    
T  42193491 gttggcctagtggttgacttgggatcttggagtttgct 42193528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 161 - 209
Target Start/End: Complemental strand, 930683 - 930635
Alignment:
Q  161 atttggggttggtctagtggttgacttgggattttggagtttgctcctc 209  Q
    |||||||||||| | |||||||| |||| |||||| |||||||||||||    
T  930683 atttggggttggcccagtggttggcttgagattttagagtttgctcctc 930635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 156 - 208
Target Start/End: Original strand, 30485822 - 30485874
Alignment:
Q  156 aacctatttggggttggtctagtggttgacttgggattttggagtttgctcct 208  Q
    |||| |||||||||||| | || ||||| |||||||| |||||||||||||||    
T  30485822 aacccatttggggttggcccagcggttggcttgggatcttggagtttgctcct 30485874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015 (Bit Score: 59; Significance: 3e-25; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 59; E-Value: 3e-25
Query Start/End: Original strand, 64 - 153
Target Start/End: Complemental strand, 21948 - 21854
Alignment:
Q  64 gtttttaaaaggtattgagaatgattgaatgaatgaatgtggtaaatgagaatgatt-----aagcaattttcaacaaacaattgtgttaaaatg 153  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||     |||||||||||||||||| || |||||||||||    
T  21948 gtttttaaaaggtattgagaatgattgaatgaatgaatatggtaaatgggaatgattgaaaaaagcaattttcaacaaactatagtgttaaaatg 21854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 47; Significance: 5e-18; HSPs: 34)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 156 - 210
Target Start/End: Original strand, 24018380 - 24018434
Alignment:
Q  156 aacctatttggggttggtctagtggttgacttgggattttggagtttgctcctcc 210  Q
    |||||||||||||||| |||||||||||||||||||| |||||||||||||||||    
T  24018380 aacctatttggggttgatctagtggttgacttgggatcttggagtttgctcctcc 24018434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 156 - 210
Target Start/End: Original strand, 28193472 - 28193526
Alignment:
Q  156 aacctatttggggttggtctagtggttgacttgggattttggagtttgctcctcc 210  Q
    ||||||||||||||||| |||||||||| |||||||| |||||||||||||||||    
T  28193472 aacctatttggggttggcctagtggttggcttgggatcttggagtttgctcctcc 28193526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 156 - 210
Target Start/End: Complemental strand, 42643321 - 42643267
Alignment:
Q  156 aacctatttggggttggtctagtggttgacttgggattttggagtttgctcctcc 210  Q
    |||| |||||||||||| ||||||||||||||||||| |||||||||||||||||    
T  42643321 aacccatttggggttggcctagtggttgacttgggatcttggagtttgctcctcc 42643267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 161 - 209
Target Start/End: Complemental strand, 34694774 - 34694726
Alignment:
Q  161 atttggggttggtctagtggttgacttgggattttggagtttgctcctc 209  Q
    |||||||||||||||||||||||||||| ||| ||||||||||||||||    
T  34694774 atttggggttggtctagtggttgacttgtgatcttggagtttgctcctc 34694726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 155 - 210
Target Start/End: Original strand, 2618183 - 2618238
Alignment:
Q  155 caacctatttggggttggtctagtggttgacttgggattttggagtttgctcctcc 210  Q
    ||||| |||||||||||| |||||||||| |||||||| |||||||||||||||||    
T  2618183 caacccatttggggttggcctagtggttggcttgggatcttggagtttgctcctcc 2618238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 155 - 210
Target Start/End: Original strand, 18532104 - 18532159
Alignment:
Q  155 caacctatttggggttggtctagtggttgacttgggattttggagtttgctcctcc 210  Q
    ||||| |||||||||||| |||||||||| |||||||| |||||||||||||||||    
T  18532104 caacccatttggggttggcctagtggttggcttgggatcttggagtttgctcctcc 18532159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 156 - 210
Target Start/End: Complemental strand, 3734826 - 3734772
Alignment:
Q  156 aacctatttggggttggtctagtggttgacttgggattttggagtttgctcctcc 210  Q
    |||| |||||||||||| |||||||||| |||||||| |||||||||||||||||    
T  3734826 aacccatttggggttggcctagtggttggcttgggatcttggagtttgctcctcc 3734772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 156 - 210
Target Start/End: Original strand, 32879277 - 32879331
Alignment:
Q  156 aacctatttggggttggtctagtggttgacttgggattttggagtttgctcctcc 210  Q
    |||| |||||||||||||||||||||||||||||||| || ||||||| ||||||    
T  32879277 aacccatttggggttggtctagtggttgacttgggatcttcgagtttggtcctcc 32879331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 156 - 210
Target Start/End: Complemental strand, 34237858 - 34237804
Alignment:
Q  156 aacctatttggggttggtctagtggttgacttgggattttggagtttgctcctcc 210  Q
    |||| |||||||||||| |||||||||| |||||||| |||||||||||||||||    
T  34237858 aacccatttggggttggcctagtggttggcttgggatcttggagtttgctcctcc 34237804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 161 - 210
Target Start/End: Original strand, 19471612 - 19471661
Alignment:
Q  161 atttggggttggtctagtggttgacttgggattttggagtttgctcctcc 210  Q
    |||||||||||| |||||||||| |||||||| |||||||||||||||||    
T  19471612 atttggggttggcctagtggttggcttgggatcttggagtttgctcctcc 19471661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 161 - 210
Target Start/End: Original strand, 19542536 - 19542585
Alignment:
Q  161 atttggggttggtctagtggttgacttgggattttggagtttgctcctcc 210  Q
    |||||||||||| |||||||||| |||||||| |||||||||||||||||    
T  19542536 atttggggttggcctagtggttggcttgggatcttggagtttgctcctcc 19542585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 161 - 210
Target Start/End: Complemental strand, 19590160 - 19590111
Alignment:
Q  161 atttggggttggtctagtggttgacttgggattttggagtttgctcctcc 210  Q
    |||||||||||| |||||||||| |||||||| |||||||||||||||||    
T  19590160 atttggggttggcctagtggttggcttgggatcttggagtttgctcctcc 19590111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 156 - 208
Target Start/End: Original strand, 4718643 - 4718695
Alignment:
Q  156 aacctatttggggttggtctagtggttgacttgggattttggagtttgctcct 208  Q
    |||| |||||||||||| |||||||||| |||||||| |||||||||||||||    
T  4718643 aacccatttggggttggcctagtggttggcttgggatcttggagtttgctcct 4718695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 161 - 209
Target Start/End: Complemental strand, 36848947 - 36848899
Alignment:
Q  161 atttggggttggtctagtggttgacttgggattttggagtttgctcctc 209  Q
    ||||||||||||  |||||||||||||||| ||||||||||||||||||    
T  36848947 atttggggttggcatagtggttgacttgggtttttggagtttgctcctc 36848899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 156 - 210
Target Start/End: Original strand, 20305906 - 20305960
Alignment:
Q  156 aacctatttggggttggtctagtggttgacttgggattttggagtttgctcctcc 210  Q
    |||| |||||||||||| |||||||||| |||||||| || ||||||||||||||    
T  20305906 aacccatttggggttggcctagtggttggcttgggatcttagagtttgctcctcc 20305960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 156 - 210
Target Start/End: Original strand, 21092539 - 21092593
Alignment:
Q  156 aacctatttggggttggtctagtggttgacttgggattttggagtttgctcctcc 210  Q
    |||| |||||||||||| |||||||||| |||||||| || ||||||||||||||    
T  21092539 aacccatttggggttggcctagtggttggcttgggatcttagagtttgctcctcc 21092593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 156 - 210
Target Start/End: Original strand, 39349254 - 39349308
Alignment:
Q  156 aacctatttggggttggtctagtggttgacttgggattttggagtttgctcctcc 210  Q
    |||| |||||||||||| | |||||||| |||||||| |||||||||||||||||    
T  39349254 aacccatttggggttggcccagtggttggcttgggatcttggagtttgctcctcc 39349308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 161 - 210
Target Start/End: Complemental strand, 15259604 - 15259555
Alignment:
Q  161 atttggggttggtctagtggttgacttgggattttggagtttgctcctcc 210  Q
    |||||||||||||||||||||||  ||||||| ||||| |||||||||||    
T  15259604 atttggggttggtctagtggttggtttgggatcttggattttgctcctcc 15259555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 161 - 210
Target Start/End: Complemental strand, 27746533 - 27746484
Alignment:
Q  161 atttggggttggtctagtggttgacttgggattttggagtttgctcctcc 210  Q
    |||||||||||| ||||||||||  ||||||| |||||||||||||||||    
T  27746533 atttggggttggcctagtggttggtttgggatcttggagtttgctcctcc 27746484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 154 - 210
Target Start/End: Complemental strand, 7558148 - 7558092
Alignment:
Q  154 tcaacctatttggggttggtctagtggttgacttgggattttggagtttgctcctcc 210  Q
    |||||| |||||||||||| ||||| |||  |||||||| |||||||||||||||||    
T  7558148 tcaacccatttggggttggcctagtagttagcttgggatcttggagtttgctcctcc 7558092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 161 - 209
Target Start/End: Original strand, 28908824 - 28908872
Alignment:
Q  161 atttggggttggtctagtggttgacttgggattttggagtttgctcctc 209  Q
    |||||| ||||||||||||||||  |||| |||||||||||||||||||    
T  28908824 atttggagttggtctagtggttggtttggaattttggagtttgctcctc 28908872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 161 - 209
Target Start/End: Complemental strand, 34639404 - 34639356
Alignment:
Q  161 atttggggttggtctagtggttgacttgggattttggagtttgctcctc 209  Q
    |||||||||| |||||||||||| |||||||| ||||||| ||||||||    
T  34639404 atttggggttagtctagtggttggcttgggatcttggagtgtgctcctc 34639356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 161 - 210
Target Start/End: Complemental strand, 264597 - 264548
Alignment:
Q  161 atttggggttggtctagtggttgacttgggattttggagtttgctcctcc 210  Q
    |||||| ||||| |||||||||| |||||||| || ||||||||||||||    
T  264597 atttggcgttggcctagtggttggcttgggatcttcgagtttgctcctcc 264548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 161 - 210
Target Start/End: Original strand, 651324 - 651373
Alignment:
Q  161 atttggggttggtctagtggttgacttgggattttggagtttgctcctcc 210  Q
    |||||| ||||| |||||||||| |||||||| || ||||||||||||||    
T  651324 atttggcgttggcctagtggttggcttgggatcttcgagtttgctcctcc 651373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 161 - 210
Target Start/End: Original strand, 837059 - 837108
Alignment:
Q  161 atttggggttggtctagtggttgacttgggattttggagtttgctcctcc 210  Q
    |||||| ||||| |||||||||| |||||||| || ||||||||||||||    
T  837059 atttggcgttggcctagtggttggcttgggatcttcgagtttgctcctcc 837108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 161 - 210
Target Start/End: Original strand, 8042657 - 8042706
Alignment:
Q  161 atttggggttggtctagtggttgacttgggattttggagtttgctcctcc 210  Q
    |||||||||||  |||||| ||| |||||||| |||||||||||||||||    
T  8042657 atttggggttgacctagtgcttggcttgggatcttggagtttgctcctcc 8042706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 161 - 210
Target Start/End: Original strand, 21667553 - 21667602
Alignment:
Q  161 atttggggttggtctagtggttgacttgggattttggagtttgctcctcc 210  Q
    ||||| ||||||||||||||||| ||||| || |||||| ||||||||||    
T  21667553 atttgaggttggtctagtggttggcttggaatcttggaggttgctcctcc 21667602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 156 - 209
Target Start/End: Complemental strand, 26169051 - 26168998
Alignment:
Q  156 aacctatttggggttggtctagtggttgacttgggattttggagtttgctcctc 209  Q
    |||| |||| ||||||| |||||||||  |||||||| ||||||||||||||||    
T  26169051 aacccatttagggttggcctagtggtttgcttgggatcttggagtttgctcctc 26168998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 164 - 205
Target Start/End: Original strand, 41070767 - 41070808
Alignment:
Q  164 tggggttggtctagtggttgacttgggattttggagtttgct 205  Q
    ||||||||| ||||||||||||||||||| ||||||| ||||    
T  41070767 tggggttggcctagtggttgacttgggatcttggagtgtgct 41070808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 161 - 202
Target Start/End: Original strand, 42328008 - 42328049
Alignment:
Q  161 atttggggttggtctagtggttgacttgggattttggagttt 202  Q
    |||||||||||| |||||||||| |||||||| |||||||||    
T  42328008 atttggggttggcctagtggttggcttgggatcttggagttt 42328049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 146 - 205
Target Start/End: Original strand, 24999230 - 24999287
Alignment:
Q  146 ttaaaatgtcaacctatttggggttggtctagtggttgacttgggattttggagtttgct 205  Q
    ||||||| | |||| ||||||||  ||||||||||||||||||||||  |||||||||||    
T  24999230 ttaaaatattaacccatttgggg--ggtctagtggttgacttgggatcatggagtttgct 24999287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 155 - 203
Target Start/End: Original strand, 28088283 - 28088331
Alignment:
Q  155 caacctatttggggttggtctagtggttgacttgggattttggagtttg 203  Q
    ||||| || |||||||||  |||||||||||||||||| ||||||||||    
T  28088283 caacccatctggggttggcttagtggttgacttgggatcttggagtttg 28088331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 161 - 209
Target Start/End: Original strand, 28964036 - 28964084
Alignment:
Q  161 atttggggttggtctagtggttgacttgggattttggagtttgctcctc 209  Q
    |||||||||||||||||||||||  ||| ||| || |||||||||||||    
T  28964036 atttggggttggtctagtggttggtttgagatcttagagtttgctcctc 28964084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 161 - 205
Target Start/End: Original strand, 39317023 - 39317067
Alignment:
Q  161 atttggggttggtctagtggttgacttgggattttggagtttgct 205  Q
    ||||| |||||||||||||||||||||| ||| ||||||| ||||    
T  39317023 atttgaggttggtctagtggttgacttgagatattggagtgtgct 39317067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 44; Significance: 3e-16; HSPs: 1)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 154 - 209
Target Start/End: Original strand, 27768 - 27823
Alignment:
Q  154 tcaacctatttggggttggtctagtggttgacttgggattttggagtttgctcctc 209  Q
    |||||| |||||||||||||||||||||||  ||||||||||||||||||||||||    
T  27768 tcaacccatttggggttggtctagtggttggtttgggattttggagtttgctcctc 27823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 44; Significance: 3e-16; HSPs: 44)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 161 - 208
Target Start/End: Complemental strand, 8435893 - 8435846
Alignment:
Q  161 atttggggttggtctagtggttgacttgggattttggagtttgctcct 208  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||    
T  8435893 atttggggttggtctagtggttgacttgggatcttggagtttgctcct 8435846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 156 - 210
Target Start/End: Original strand, 10091186 - 10091240
Alignment:
Q  156 aacctatttggggttggtctagtggttgacttgggattttggagtttgctcctcc 210  Q
    |||| ||||||||||||||||||||||| |||||||| |||||||||||||||||    
T  10091186 aacccatttggggttggtctagtggttggcttgggatcttggagtttgctcctcc 10091240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 156 - 209
Target Start/End: Original strand, 27312150 - 27312203
Alignment:
Q  156 aacctatttggggttggtctagtggttgacttgggattttggagtttgctcctc 209  Q
    ||||||||||||||||| |||||||||| |||||||| ||||||||||||||||    
T  27312150 aacctatttggggttggcctagtggttggcttgggatcttggagtttgctcctc 27312203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 155 - 210
Target Start/End: Original strand, 2344296 - 2344351
Alignment:
Q  155 caacctatttggggttggtctagtggttgacttgggattttggagtttgctcctcc 210  Q
    ||||| |||||||||||| |||||||||| |||||||| |||||||||||||||||    
T  2344296 caacccatttggggttggcctagtggttggcttgggatcttggagtttgctcctcc 2344351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 155 - 206
Target Start/End: Original strand, 31197588 - 31197639
Alignment:
Q  155 caacctatttggggttggtctagtggttgacttgggattttggagtttgctc 206  Q
    ||||| ||||||||||||||||||||||| |||||||| |||||||||||||    
T  31197588 caacccatttggggttggtctagtggttggcttgggatcttggagtttgctc 31197639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 155 - 210
Target Start/End: Complemental strand, 40543114 - 40543059
Alignment:
Q  155 caacctatttggggttggtctagtggttgacttgggattttggagtttgctcctcc 210  Q
    ||||| |||||||||||| |||||||||| |||||||| |||||||||||||||||    
T  40543114 caacccatttggggttggcctagtggttggcttgggatcttggagtttgctcctcc 40543059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 156 - 210
Target Start/End: Original strand, 2751269 - 2751323
Alignment:
Q  156 aacctatttggggttggtctagtggttgacttgggattttggagtttgctcctcc 210  Q
    |||| |||||||||||| |||||||||| |||||||| |||||||||||||||||    
T  2751269 aacccatttggggttggcctagtggttggcttgggatcttggagtttgctcctcc 2751323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 156 - 210
Target Start/End: Complemental strand, 7176065 - 7176011
Alignment:
Q  156 aacctatttggggttggtctagtggttgacttgggattttggagtttgctcctcc 210  Q
    |||| |||||||||||| |||||||||| |||||||| |||||||||||||||||    
T  7176065 aacccatttggggttggcctagtggttggcttgggatcttggagtttgctcctcc 7176011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 156 - 210
Target Start/End: Original strand, 7275275 - 7275329
Alignment:
Q  156 aacctatttggggttggtctagtggttgacttgggattttggagtttgctcctcc 210  Q
    |||| |||||||||||| |||||||||| |||||||| |||||||||||||||||    
T  7275275 aacccatttggggttggcctagtggttggcttgggatcttggagtttgctcctcc 7275329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 156 - 210
Target Start/End: Original strand, 18044105 - 18044159
Alignment:
Q  156 aacctatttggggttggtctagtggttgacttgggattttggagtttgctcctcc 210  Q
    |||| |||||||||||| |||||||||| |||||||| |||||||||||||||||    
T  18044105 aacccatttggggttggcctagtggttggcttgggatcttggagtttgctcctcc 18044159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 156 - 210
Target Start/End: Complemental strand, 21218036 - 21217982
Alignment:
Q  156 aacctatttggggttggtctagtggttgacttgggattttggagtttgctcctcc 210  Q
    |||| |||||||||||| |||||||||| |||||||| |||||||||||||||||    
T  21218036 aacccatttggggttggcctagtggttggcttgggatcttggagtttgctcctcc 21217982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 156 - 210
Target Start/End: Original strand, 23854394 - 23854448
Alignment:
Q  156 aacctatttggggttggtctagtggttgacttgggattttggagtttgctcctcc 210  Q
    |||| |||||||||||| |||||||||| |||||||| |||||||||||||||||    
T  23854394 aacccatttggggttggcctagtggttggcttgggatcttggagtttgctcctcc 23854448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 156 - 210
Target Start/End: Original strand, 32849589 - 32849643
Alignment:
Q  156 aacctatttggggttggtctagtggttgacttgggattttggagtttgctcctcc 210  Q
    |||| |||||||||| | ||||||||||||||||||| |||||||||||||||||    
T  32849589 aacccatttggggttagcctagtggttgacttgggatcttggagtttgctcctcc 32849643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 161 - 210
Target Start/End: Original strand, 2103058 - 2103107
Alignment:
Q  161 atttggggttggtctagtggttgacttgggattttggagtttgctcctcc 210  Q
    |||||||||||| |||||||||| |||||||| |||||||||||||||||    
T  2103058 atttggggttggcctagtggttggcttgggatcttggagtttgctcctcc 2103107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 161 - 210
Target Start/End: Complemental strand, 13332621 - 13332572
Alignment:
Q  161 atttggggttggtctagtggttgacttgggattttggagtttgctcctcc 210  Q
    |||||||||||| |||||||||| |||||||| |||||||||||||||||    
T  13332621 atttggggttggcctagtggttggcttgggatcttggagtttgctcctcc 13332572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 161 - 210
Target Start/End: Original strand, 22119891 - 22119940
Alignment:
Q  161 atttggggttggtctagtggttgacttgggattttggagtttgctcctcc 210  Q
    |||||||||||| |||||||||| |||||||| |||||||||||||||||    
T  22119891 atttggggttggcctagtggttggcttgggatcttggagtttgctcctcc 22119940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 161 - 210
Target Start/End: Original strand, 28003839 - 28003888
Alignment:
Q  161 atttggggttggtctagtggttgacttgggattttggagtttgctcctcc 210  Q
    ||||||||||| ||||||||||| |||||||| |||||||||||||||||    
T  28003839 atttggggttgatctagtggttggcttgggatcttggagtttgctcctcc 28003888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 154 - 209
Target Start/End: Complemental strand, 31713100 - 31713045
Alignment:
Q  154 tcaacctatttggggttggtctagtggttgacttgggattttggagtttgctcctc 209  Q
    |||||| |||||||||||| ||||||||||  ||||||| ||||||||||||||||    
T  31713100 tcaacccatttggggttggcctagtggttggtttgggatcttggagtttgctcctc 31713045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 156 - 210
Target Start/End: Original strand, 17212051 - 17212105
Alignment:
Q  156 aacctatttggggttggtctagtggttgacttgggattttggagtttgctcctcc 210  Q
    |||| ||||||||||||  ||||||||| |||||||| |||||||||||||||||    
T  17212051 aacccatttggggttggcttagtggttggcttgggatcttggagtttgctcctcc 17212105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 156 - 206
Target Start/End: Original strand, 22638290 - 22638340
Alignment:
Q  156 aacctatttggggttggtctagtggttgacttgggattttggagtttgctc 206  Q
    |||| |||||||||||||||||||||||||||| ||| || ||||||||||    
T  22638290 aacccatttggggttggtctagtggttgacttgagatcttagagtttgctc 22638340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 156 - 210
Target Start/End: Complemental strand, 39145855 - 39145801
Alignment:
Q  156 aacctatttggggttggtctagtggttgacttgggattttggagtttgctcctcc 210  Q
    |||| ||||| |||||  ||||||||||||||||||| |||||||||||||||||    
T  39145855 aacccatttgaggttgacctagtggttgacttgggatcttggagtttgctcctcc 39145801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 161 - 210
Target Start/End: Complemental strand, 7800030 - 7799981
Alignment:
Q  161 atttggggttggtctagtggttgacttgggattttggagtttgctcctcc 210  Q
    |||||||||||  |||||||||| |||||||| |||||||||||||||||    
T  7800030 atttggggttgacctagtggttggcttgggatcttggagtttgctcctcc 7799981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 156 - 209
Target Start/End: Original strand, 11997847 - 11997900
Alignment:
Q  156 aacctatttggggttggtctagtggttgacttgggattttggagtttgctcctc 209  Q
    |||| ||||| |||||| |||||||||| |||||||| ||||||||||||||||    
T  11997847 aacccatttgtggttgggctagtggttggcttgggatcttggagtttgctcctc 11997900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 161 - 210
Target Start/End: Original strand, 28089819 - 28089868
Alignment:
Q  161 atttggggttggtctagtggttgacttgggattttggagtttgctcctcc 210  Q
    |||||||||||| |||||||||| |||| ||| |||||||||||||||||    
T  28089819 atttggggttggcctagtggttggcttgagatcttggagtttgctcctcc 28089868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 156 - 205
Target Start/End: Original strand, 28646967 - 28647016
Alignment:
Q  156 aacctatttggggttggtctagtggttgacttgggattttggagtttgct 205  Q
    ||||||||||||||||| |||||| |||||||||||| ||||||| ||||    
T  28646967 aacctatttggggttggcctagtgattgacttgggatcttggagtgtgct 28647016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 161 - 209
Target Start/End: Complemental strand, 21574301 - 21574253
Alignment:
Q  161 atttggggttggtctagtggttgacttgggattttggagtttgctcctc 209  Q
    |||||||||||| ||||||||||  ||||||||||||||| ||||||||    
T  21574301 atttggggttggcctagtggttggtttgggattttggagtgtgctcctc 21574253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 161 - 209
Target Start/End: Original strand, 42814867 - 42814915
Alignment:
Q  161 atttggggttggtctagtggttgacttgggattttggagtttgctcctc 209  Q
    |||||| |||||  |||||||||||||||||| ||||||||||||||||    
T  42814867 atttggagttggcttagtggttgacttgggatcttggagtttgctcctc 42814915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 174 - 208
Target Start/End: Complemental strand, 24686166 - 24686132
Alignment:
Q  174 ctagtggttgacttgggattttggagtttgctcct 208  Q
    ||||||||||||||||||| |||||||||||||||    
T  24686166 ctagtggttgacttgggatcttggagtttgctcct 24686132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 156 - 210
Target Start/End: Original strand, 25333417 - 25333471
Alignment:
Q  156 aacctatttggggttggtctagtggttgacttgggattttggagtttgctcctcc 210  Q
    |||| ||||||||||||  ||||||||| |||||||| |||||||||||| ||||    
T  25333417 aacccatttggggttggcttagtggttggcttgggatcttggagtttgcttctcc 25333471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 156 - 206
Target Start/End: Original strand, 27009357 - 27009407
Alignment:
Q  156 aacctatttggggttggtctagtggttgacttgggattttggagtttgctc 206  Q
    |||| |||||||||||| |||||||||| ||| |||| |||||||||||||    
T  27009357 aacccatttggggttggcctagtggttggcttcggatcttggagtttgctc 27009407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 167 - 209
Target Start/End: Complemental strand, 42913705 - 42913663
Alignment:
Q  167 ggttggtctagtggttgacttgggattttggagtttgctcctc 209  Q
    |||||| |||||||||| |||||||| ||||||||||||||||    
T  42913705 ggttggcctagtggttggcttgggatcttggagtttgctcctc 42913663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 161 - 209
Target Start/End: Complemental strand, 3951189 - 3951140
Alignment:
Q  161 atttggggttggtctagtggttgactt-gggattttggagtttgctcctc 209  Q
    ||||||||||||||||||||||| ||| ||||| ||||||| ||||||||    
T  3951189 atttggggttggtctagtggttggcttggggatcttggagtgtgctcctc 3951140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 21 - 73
Target Start/End: Complemental strand, 16650745 - 16650692
Alignment:
Q  21 tgaattgatttttaaaagacatgcttaccat-aagcaaatgaatgtttttaaaa 73  Q
    ||||||||| |||  |||||||||||||||| || |||||||||||||||||||    
T  16650745 tgaattgatctttctaagacatgcttaccattaaccaaatgaatgtttttaaaa 16650692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 21 - 73
Target Start/End: Complemental strand, 17625105 - 17625052
Alignment:
Q  21 tgaattgatttttaaaagacatgcttaccat-aagcaaatgaatgtttttaaaa 73  Q
    ||||||||| |||  |||||||||||||||| || |||||||||||||||||||    
T  17625105 tgaattgatctttctaagacatgcttaccattaaccaaatgaatgtttttaaaa 17625052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 161 - 210
Target Start/End: Original strand, 21835154 - 21835203
Alignment:
Q  161 atttggggttggtctagtggttgacttgggattttggagtttgctcctcc 210  Q
    |||| ||||||  |||||||||| |||||||| |||||||||||||||||    
T  21835154 atttagggttgacctagtggttggcttgggatcttggagtttgctcctcc 21835203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 156 - 209
Target Start/End: Original strand, 40332097 - 40332150
Alignment:
Q  156 aacctatttggggttggtctagtggttgacttgggattttggagtttgctcctc 209  Q
    |||| |||||| |||||||||||||||| ||||  || ||||||||||||||||    
T  40332097 aacccatttggagttggtctagtggttggcttgaaatcttggagtttgctcctc 40332150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 161 - 209
Target Start/End: Original strand, 9683829 - 9683877
Alignment:
Q  161 atttggggttggtctagtggttgacttgggattttggagtttgctcctc 209  Q
    ||||| |||||| ||||||||||||||| ||| | ||||||||||||||    
T  9683829 atttgcggttggcctagtggttgacttgagatctgggagtttgctcctc 9683877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 161 - 209
Target Start/End: Complemental strand, 12211733 - 12211685
Alignment:
Q  161 atttggggttggtctagtggttgacttgggattttggagtttgctcctc 209  Q
    |||||||||||| |||||||||| ||| |||| ||||||| ||||||||    
T  12211733 atttggggttggcctagtggttggcttaggatcttggagtgtgctcctc 12211685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 161 - 209
Target Start/End: Original strand, 19421234 - 19421282
Alignment:
Q  161 atttggggttggtctagtggttgacttgggattttggagtttgctcctc 209  Q
    |||||||||||   ||||||||| |||||||| ||||||||||||||||    
T  19421234 atttggggttgacttagtggttggcttgggatcttggagtttgctcctc 19421282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 156 - 208
Target Start/End: Original strand, 21370595 - 21370647
Alignment:
Q  156 aacctatttggggttggtctagtggttgacttgggattttggagtttgctcct 208  Q
    |||| |||||||||||| ||||||||||  ||||||| ||||||||| |||||    
T  21370595 aacccatttggggttggcctagtggttggtttgggatcttggagtttactcct 21370647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 174 - 210
Target Start/End: Original strand, 22299865 - 22299901
Alignment:
Q  174 ctagtggttgacttgggattttggagtttgctcctcc 210  Q
    |||||||||| |||||||| |||||||||||||||||    
T  22299865 ctagtggttggcttgggatcttggagtttgctcctcc 22299901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 165 - 209
Target Start/End: Original strand, 22696327 - 22696371
Alignment:
Q  165 ggggttggtctagtggttgacttgggattttggagtttgctcctc 209  Q
    |||||||| ||||||||||| ||||||| ||||||| ||||||||    
T  22696327 ggggttggcctagtggttgatttgggatcttggagtgtgctcctc 22696371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 161 - 209
Target Start/End: Complemental strand, 23330937 - 23330889
Alignment:
Q  161 atttggggttggtctagtggttgacttgggattttggagtttgctcctc 209  Q
    |||||||||| | |||||||||| ||||||||||| |||| ||||||||    
T  23330937 atttggggttagcctagtggttggcttgggattttagagtgtgctcctc 23330889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 173 - 209
Target Start/End: Original strand, 31481062 - 31481098
Alignment:
Q  173 tctagtggttgacttgggattttggagtttgctcctc 209  Q
    |||||||||||||||| ||||||||||| ||||||||    
T  31481062 tctagtggttgacttgagattttggagtgtgctcctc 31481098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 44; Significance: 3e-16; HSPs: 37)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 155 - 210
Target Start/End: Original strand, 48977381 - 48977436
Alignment:
Q  155 caacctatttggggttggtctagtggttgacttgggattttggagtttgctcctcc 210  Q
    ||||| |||||||||||| ||||||||||||||||||| |||||||||||||||||    
T  48977381 caacccatttggggttggcctagtggttgacttgggatcttggagtttgctcctcc 48977436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 156 - 210
Target Start/End: Original strand, 21362937 - 21362991
Alignment:
Q  156 aacctatttggggttggtctagtggttgacttgggattttggagtttgctcctcc 210  Q
    |||| |||||||||||| ||||||||||||||||||| |||||||||||||||||    
T  21362937 aacccatttggggttggcctagtggttgacttgggatcttggagtttgctcctcc 21362991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 156 - 210
Target Start/End: Complemental strand, 25289917 - 25289863
Alignment:
Q  156 aacctatttggggttggtctagtggttgacttgggattttggagtttgctcctcc 210  Q
    |||| ||||||||||||||||||||||| |||||||| |||||||||||||||||    
T  25289917 aacccatttggggttggtctagtggttggcttgggatcttggagtttgctcctcc 25289863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 156 - 210
Target Start/End: Complemental strand, 40133652 - 40133598
Alignment:
Q  156 aacctatttggggttggtctagtggttgacttgggattttggagtttgctcctcc 210  Q
    |||| |||||||||||| |||||||||| ||||||||||||||||||||||||||    
T  40133652 aacccatttggggttggcctagtggttggcttgggattttggagtttgctcctcc 40133598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 156 - 210
Target Start/End: Original strand, 40940819 - 40940873
Alignment:
Q  156 aacctatttggggttggtctagtggttgacttgggattttggagtttgctcctcc 210  Q
    |||| ||||||||||||||||||||||| |||||||| |||||||||||||||||    
T  40940819 aacccatttggggttggtctagtggttggcttgggatcttggagtttgctcctcc 40940873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 155 - 210
Target Start/End: Original strand, 30257617 - 30257672
Alignment:
Q  155 caacctatttggggttggtctagtggttgacttgggattttggagtttgctcctcc 210  Q
    ||||| |||||||||||| |||||||||| |||||||| |||||||||||||||||    
T  30257617 caacccatttggggttggcctagtggttggcttgggatcttggagtttgctcctcc 30257672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 155 - 210
Target Start/End: Complemental strand, 45529958 - 45529903
Alignment:
Q  155 caacctatttggggttggtctagtggttgacttgggattttggagtttgctcctcc 210  Q
    ||||| |||||||||||| |||||||||| |||||||| |||||||||||||||||    
T  45529958 caacccatttggggttggcctagtggttggcttgggatcttggagtttgctcctcc 45529903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 156 - 210
Target Start/End: Complemental strand, 7485728 - 7485674
Alignment:
Q  156 aacctatttggggttggtctagtggttgacttgggattttggagtttgctcctcc 210  Q
    |||| ||||||||||||  |||||||||||||||||| |||||||||||||||||    
T  7485728 aacccatttggggttggcatagtggttgacttgggatcttggagtttgctcctcc 7485674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 156 - 210
Target Start/End: Complemental strand, 30807356 - 30807302
Alignment:
Q  156 aacctatttggggttggtctagtggttgacttgggattttggagtttgctcctcc 210  Q
    |||| |||||||||||| |||||||||| |||||||| |||||||||||||||||    
T  30807356 aacccatttggggttggcctagtggttggcttgggatcttggagtttgctcctcc 30807302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 156 - 210
Target Start/End: Complemental strand, 34492778 - 34492724
Alignment:
Q  156 aacctatttggggttggtctagtggttgacttgggattttggagtttgctcctcc 210  Q
    |||| |||||||||||| |||||||||| |||||||| |||||||||||||||||    
T  34492778 aacccatttggggttggcctagtggttggcttgggatcttggagtttgctcctcc 34492724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 156 - 210
Target Start/End: Original strand, 35492905 - 35492959
Alignment:
Q  156 aacctatttggggttggtctagtggttgacttgggattttggagtttgctcctcc 210  Q
    |||| |||||||||||| |||||||||| |||||||| |||||||||||||||||    
T  35492905 aacccatttggggttggcctagtggttggcttgggatcttggagtttgctcctcc 35492959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 156 - 210
Target Start/End: Original strand, 46576342 - 46576396
Alignment:
Q  156 aacctatttggggttggtctagtggttgacttgggattttggagtttgctcctcc 210  Q
    |||| |||||||||||| |||||||||| |||||||| |||||||||||||||||    
T  46576342 aacccatttggggttggcctagtggttggcttgggatcttggagtttgctcctcc 46576396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 161 - 210
Target Start/End: Complemental strand, 25344255 - 25344206
Alignment:
Q  161 atttggggttggtctagtggttgacttgggattttggagtttgctcctcc 210  Q
    |||||||||||| ||||||||||||||||||| || ||||||||||||||    
T  25344255 atttggggttggcctagtggttgacttgggatcttcgagtttgctcctcc 25344206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 161 - 210
Target Start/End: Original strand, 25379760 - 25379809
Alignment:
Q  161 atttggggttggtctagtggttgacttgggattttggagtttgctcctcc 210  Q
    |||||||||||| |||||||||| |||||||| |||||||||||||||||    
T  25379760 atttggggttggcctagtggttggcttgggatcttggagtttgctcctcc 25379809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 161 - 210
Target Start/End: Complemental strand, 52821833 - 52821784
Alignment:
Q  161 atttggggttggtctagtggttgacttgggattttggagtttgctcctcc 210  Q
    |||||| ||||| ||||||||||||||||||| |||||||||||||||||    
T  52821833 atttggtgttggcctagtggttgacttgggatcttggagtttgctcctcc 52821784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 161 - 210
Target Start/End: Complemental strand, 53424374 - 53424325
Alignment:
Q  161 atttggggttggtctagtggttgacttgggattttggagtttgctcctcc 210  Q
    |||||||||||| |||||||||| |||||||| |||||||||||||||||    
T  53424374 atttggggttggcctagtggttggcttgggatcttggagtttgctcctcc 53424325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 154 - 206
Target Start/End: Complemental strand, 18177092 - 18177040
Alignment:
Q  154 tcaacctatttggggttggtctagtggttgacttgggattttggagtttgctc 206  Q
    |||||| |||||||||||| ||||||||||||||| ||| |||||||||||||    
T  18177092 tcaacccatttggggttggcctagtggttgacttgagatcttggagtttgctc 18177040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 166 - 210
Target Start/End: Original strand, 32151428 - 32151472
Alignment:
Q  166 gggttggtctagtggttgacttgggattttggagtttgctcctcc 210  Q
    ||||||| ||||||||||||||||||| |||||||||||||||||    
T  32151428 gggttggcctagtggttgacttgggatcttggagtttgctcctcc 32151472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 156 - 210
Target Start/End: Complemental strand, 7470418 - 7470364
Alignment:
Q  156 aacctatttggggttggtctagtggttgacttgggattttggagtttgctcctcc 210  Q
    |||| |||||||||| | ||||||||||||||| ||| |||||||||||||||||    
T  7470418 aacccatttggggtttgcctagtggttgacttgagatcttggagtttgctcctcc 7470364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 156 - 210
Target Start/End: Complemental strand, 8456353 - 8456299
Alignment:
Q  156 aacctatttggggttggtctagtggttgacttgggattttggagtttgctcctcc 210  Q
    |||| |||||||||||| |||||||||| |||||||| || ||||||||||||||    
T  8456353 aacccatttggggttggcctagtggttggcttgggatcttcgagtttgctcctcc 8456299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 156 - 210
Target Start/End: Original strand, 9842915 - 9842969
Alignment:
Q  156 aacctatttggggttggtctagtggttgacttgggattttggagtttgctcctcc 210  Q
    |||| |||||||||||||||||||||||  ||||||| ||||||||| |||||||    
T  9842915 aacccatttggggttggtctagtggttggtttgggatcttggagttttctcctcc 9842969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 156 - 210
Target Start/End: Complemental strand, 31538041 - 31537987
Alignment:
Q  156 aacctatttggggttggtctagtggttgacttgggattttggagtttgctcctcc 210  Q
    |||| |||||||||||| |||||||||| ||| |||| |||||||||||||||||    
T  31538041 aacccatttggggttggcctagtggttggcttaggatcttggagtttgctcctcc 31537987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 156 - 210
Target Start/End: Complemental strand, 45272619 - 45272565
Alignment:
Q  156 aacctatttggggttggtctagtggttgacttgggattttggagtttgctcctcc 210  Q
    |||| |||||||||||| ||||| |||| |||||||| |||||||||||||||||    
T  45272619 aacccatttggggttggcctagtcgttggcttgggatcttggagtttgctcctcc 45272565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 155 - 209
Target Start/End: Original strand, 50582985 - 50583039
Alignment:
Q  155 caacctatttggggttggtctagtggttgacttgggattttggagtttgctcctc 209  Q
    ||||| |||||||||||| ||||||||||  ||||||| ||||||||||||||||    
T  50582985 caacccatttggggttggcctagtggttggtttgggatcttggagtttgctcctc 50583039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 161 - 210
Target Start/End: Complemental strand, 52455847 - 52455798
Alignment:
Q  161 atttggggttggtctagtggttgacttgggattttggagtttgctcctcc 210  Q
    |||||||||||| |||||||||| || ||||| |||||||||||||||||    
T  52455847 atttggggttggcctagtggttggctagggatcttggagtttgctcctcc 52455798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 154 - 209
Target Start/End: Complemental strand, 4252601 - 4252546
Alignment:
Q  154 tcaacctatttggggttggtctagtggttgacttgggattttggagtttgctcctc 209  Q
    |||||| |||||||||||| |||||||||| |||| ||| ||||||| ||||||||    
T  4252601 tcaacccatttggggttggcctagtggttggcttgagatcttggagtgtgctcctc 4252546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 163 - 210
Target Start/End: Original strand, 26174114 - 26174161
Alignment:
Q  163 ttggggttggtctagtggttgacttgggattttggagtttgctcctcc 210  Q
    |||| ||||| |||||||||| |||||||| |||||||||||||||||    
T  26174114 ttggagttggcctagtggttggcttgggatcttggagtttgctcctcc 26174161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 156 - 210
Target Start/End: Complemental strand, 29915472 - 29915418
Alignment:
Q  156 aacctatttggggttggtctagtggttgacttgggattttggagtttgctcctcc 210  Q
    |||| |||| ||||||  ||| ||||||||||||||| |||||||||||||||||    
T  29915472 aacccatttagggttgacctaatggttgacttgggatcttggagtttgctcctcc 29915418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 156 - 210
Target Start/End: Complemental strand, 29964625 - 29964571
Alignment:
Q  156 aacctatttggggttggtctagtggttgacttgggattttggagtttgctcctcc 210  Q
    |||| |||| ||||||  ||| ||||||||||||||| |||||||||||||||||    
T  29964625 aacccatttagggttgacctaatggttgacttgggatcttggagtttgctcctcc 29964571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 156 - 210
Target Start/End: Complemental strand, 49258465 - 49258411
Alignment:
Q  156 aacctatttggggttggtctagtggttgacttgggattttggagtttgctcctcc 210  Q
    |||| |||||||||| | |||||||||| |||||||| ||| |||||||||||||    
T  49258465 aacccatttggggtttgcctagtggttggcttgggatcttgcagtttgctcctcc 49258411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 161 - 206
Target Start/End: Original strand, 24703703 - 24703748
Alignment:
Q  161 atttggggttggtctagtggttgacttgggattttggagtttgctc 206  Q
    ||||| |||||||||||||||||||||||||| || || |||||||    
T  24703703 atttgaggttggtctagtggttgacttgggatcttagaatttgctc 24703748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 169 - 210
Target Start/End: Original strand, 26108299 - 26108340
Alignment:
Q  169 ttggtctagtggttgacttgggattttggagtttgctcctcc 210  Q
    |||| |||||||||| |||||||| |||||||||||||||||    
T  26108299 ttggcctagtggttggcttgggatcttggagtttgctcctcc 26108340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 156 - 205
Target Start/End: Complemental strand, 55371488 - 55371439
Alignment:
Q  156 aacctatttggggttggtctagtggttgacttgggattttggagtttgct 205  Q
    |||||||||| |||||| |||||||||| |||| ||||||||||| ||||    
T  55371488 aacctatttgaggttggcctagtggttggcttgcgattttggagtatgct 55371439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 161 - 205
Target Start/End: Original strand, 4462632 - 4462676
Alignment:
Q  161 atttggggttggtctagtggttgacttgggattttggagtttgct 205  Q
    |||||||||||| |||||||||| |||| ||| ||||||||||||    
T  4462632 atttggggttggcctagtggttggcttgagatcttggagtttgct 4462676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 166 - 210
Target Start/End: Complemental strand, 15566692 - 15566648
Alignment:
Q  166 gggttggtctagtggttgacttgggattttggagtttgctcctcc 210  Q
    ||||||| |||||||||| |||| ||| |||||||||||||||||    
T  15566692 gggttggcctagtggttggcttgagatcttggagtttgctcctcc 15566648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 160 - 196
Target Start/End: Original strand, 26535036 - 26535072
Alignment:
Q  160 tatttggggttggtctagtggttgacttgggattttg 196  Q
    |||||||| |||||||||||||||||||| |||||||    
T  26535036 tatttgggattggtctagtggttgacttgagattttg 26535072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 174 - 210
Target Start/End: Complemental strand, 53234095 - 53234059
Alignment:
Q  174 ctagtggttgacttgggattttggagtttgctcctcc 210  Q
    |||||||||| |||||||| |||||||||||||||||    
T  53234095 ctagtggttggcttgggatcttggagtttgctcctcc 53234059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 44; Significance: 3e-16; HSPs: 18)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 154 - 209
Target Start/End: Original strand, 25293158 - 25293213
Alignment:
Q  154 tcaacctatttggggttggtctagtggttgacttgggattttggagtttgctcctc 209  Q
    |||||| ||||| |||||||||||||||||||||||||| ||||||||||||||||    
T  25293158 tcaacccatttgaggttggtctagtggttgacttgggatcttggagtttgctcctc 25293213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 156 - 210
Target Start/End: Complemental strand, 11941413 - 11941359
Alignment:
Q  156 aacctatttggggttggtctagtggttgacttgggattttggagtttgctcctcc 210  Q
    |||| ||||||||||||||||||||||| |||||||| |||||||||||||||||    
T  11941413 aacccatttggggttggtctagtggttggcttgggatcttggagtttgctcctcc 11941359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 156 - 210
Target Start/End: Complemental strand, 44946256 - 44946202
Alignment:
Q  156 aacctatttggggttggtctagtggttgacttgggattttggagtttgctcctcc 210  Q
    |||| ||||||||||||||||||||||| |||||||| |||||||||||||||||    
T  44946256 aacccatttggggttggtctagtggttggcttgggatcttggagtttgctcctcc 44946202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 155 - 210
Target Start/End: Complemental strand, 18976629 - 18976574
Alignment:
Q  155 caacctatttggggttggtctagtggttgacttgggattttggagtttgctcctcc 210  Q
    ||||| |||||||||||| |||||||||| |||||||| |||||||||||||||||    
T  18976629 caacccatttggggttggcctagtggttggcttgggatcttggagtttgctcctcc 18976574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 156 - 210
Target Start/End: Original strand, 15037953 - 15038007
Alignment:
Q  156 aacctatttggggttggtctagtggttgacttgggattttggagtttgctcctcc 210  Q
    |||| |||||||||||| ||||||||||||| ||||| |||||||||||||||||    
T  15037953 aacccatttggggttggcctagtggttgactcgggatcttggagtttgctcctcc 15038007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 161 - 210
Target Start/End: Complemental strand, 40997548 - 40997499
Alignment:
Q  161 atttggggttggtctagtggttgacttgggattttggagtttgctcctcc 210  Q
    ||||| ||| |||||||||||||||||||||| |||||||||||||||||    
T  40997548 atttgaggtgggtctagtggttgacttgggatcttggagtttgctcctcc 40997499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 156 - 210
Target Start/End: Original strand, 24195998 - 24196052
Alignment:
Q  156 aacctatttggggttggtctagtggttgacttgggattttggagtttgctcctcc 210  Q
    |||| |||||||||||| |||||||||| ||||||||||||| ||| ||||||||    
T  24195998 aacccatttggggttggcctagtggttggcttgggattttggggttcgctcctcc 24196052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 156 - 210
Target Start/End: Complemental strand, 33827776 - 33827722
Alignment:
Q  156 aacctatttggggttggtctagtggttgacttgggattttggagtttgctcctcc 210  Q
    |||| |||||||||||| |||||||||| |||||||| |||||| ||||||||||    
T  33827776 aacccatttggggttggcctagtggttggcttgggatcttggagattgctcctcc 33827722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 161 - 210
Target Start/End: Original strand, 4852557 - 4852606
Alignment:
Q  161 atttggggttggtctagtggttgacttgggattttggagtttgctcctcc 210  Q
    |||||||||||  |||||||||||||||| || |||||||||||||||||    
T  4852557 atttggggttgacctagtggttgacttggaatcttggagtttgctcctcc 4852606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 161 - 210
Target Start/End: Complemental strand, 44976352 - 44976303
Alignment:
Q  161 atttggggttggtctagtggttgacttgggattttggagtttgctcctcc 210  Q
    |||||||||||| |||||||||| |||||||| |||| ||||||||||||    
T  44976352 atttggggttggcctagtggttggcttgggatcttggggtttgctcctcc 44976303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 161 - 209
Target Start/End: Complemental strand, 918897 - 918849
Alignment:
Q  161 atttggggttggtctagtggttgacttgggattttggagtttgctcctc 209  Q
    |||||||||||  |||||||||| |||||||||||| ||||||||||||    
T  918897 atttggggttgacctagtggttggcttgggattttgaagtttgctcctc 918849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 161 - 209
Target Start/End: Complemental strand, 8192549 - 8192501
Alignment:
Q  161 atttggggttggtctagtggttgacttgggattttggagtttgctcctc 209  Q
    |||||||||||| |||||||||| |||||||| ||||||| ||||||||    
T  8192549 atttggggttggcctagtggttggcttgggatcttggagtgtgctcctc 8192501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 154 - 210
Target Start/End: Original strand, 32845083 - 32845139
Alignment:
Q  154 tcaacctatttggggttggtctagtggttgacttgggattttggagtttgctcctcc 210  Q
    |||||| |||||||||||| ||||| |||  |||||||| |||||||||||||||||    
T  32845083 tcaacccatttggggttggcctagtagttagcttgggatcttggagtttgctcctcc 32845139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 161 - 210
Target Start/End: Original strand, 17324765 - 17324814
Alignment:
Q  161 atttggggttggtctagtggttgacttgggattttggagtttgctcctcc 210  Q
    |||||||||||| ||||||||||  |||| || |||||||||||||||||    
T  17324765 atttggggttggcctagtggttggtttggtatcttggagtttgctcctcc 17324814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 156 - 209
Target Start/End: Complemental strand, 27269553 - 27269500
Alignment:
Q  156 aacctatttggggttggtctagtggttgacttgggattttggagtttgctcctc 209  Q
    |||| ||||||||||||  ||||||||| |||||||| || |||||||||||||    
T  27269553 aacccatttggggttggcatagtggttggcttgggatcttcgagtttgctcctc 27269500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 156 - 209
Target Start/End: Complemental strand, 30467033 - 30466980
Alignment:
Q  156 aacctatttggggttggtctagtggttgacttgggattttggagtttgctcctc 209  Q
    |||| |||||||||||| ||||||||||  ||||||| |||||||||| |||||    
T  30467033 aacccatttggggttggcctagtggttggtttgggatattggagtttgttcctc 30466980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 161 - 209
Target Start/End: Original strand, 14946778 - 14946826
Alignment:
Q  161 atttggggttggtctagtggttgacttgggattttggagtttgctcctc 209  Q
    |||||| ||||| ||||||||||||||| ||| ||| ||||||||||||    
T  14946778 atttggagttggcctagtggttgacttgagatcttgaagtttgctcctc 14946826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 174 - 210
Target Start/End: Original strand, 27290600 - 27290636
Alignment:
Q  174 ctagtggttgacttgggattttggagtttgctcctcc 210  Q
    |||||||||| |||||||| |||||||||||||||||    
T  27290600 ctagtggttggcttgggatcttggagtttgctcctcc 27290636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0068 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0068
Description:

Target: scaffold0068; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 156 - 210
Target Start/End: Complemental strand, 41847 - 41793
Alignment:
Q  156 aacctatttggggttggtctagtggttgacttgggattttggagtttgctcctcc 210  Q
    |||| |||||||||||| ||||||||||||||||||| |||||||||||||||||    
T  41847 aacccatttggggttggcctagtggttgacttgggatcttggagtttgctcctcc 41793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 27)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 156 - 210
Target Start/End: Complemental strand, 27455069 - 27455015
Alignment:
Q  156 aacctatttggggttggtctagtggttgacttgggattttggagtttgctcctcc 210  Q
    |||| ||||||||||||||||||||||| |||||||| |||||||||||||||||    
T  27455069 aacccatttggggttggtctagtggttggcttgggatcttggagtttgctcctcc 27455015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 156 - 210
Target Start/End: Original strand, 46607804 - 46607858
Alignment:
Q  156 aacctatttggggttggtctagtggttgacttgggattttggagtttgctcctcc 210  Q
    |||| |||||||||||| ||||||||||||||||||| |||||||||||||||||    
T  46607804 aacccatttggggttggcctagtggttgacttgggatcttggagtttgctcctcc 46607858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 161 - 206
Target Start/End: Original strand, 52135129 - 52135174
Alignment:
Q  161 atttggggttggtctagtggttgacttgggattttggagtttgctc 206  Q
    |||||||||||||||||||||||||||||||| |||||||||||||    
T  52135129 atttggggttggtctagtggttgacttgggatcttggagtttgctc 52135174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 154 - 210
Target Start/End: Complemental strand, 4621442 - 4621386
Alignment:
Q  154 tcaacctatttggggttggtctagtggttgacttgggattttggagtttgctcctcc 210  Q
    |||||| |||||||||||| |||||||||| |||||||| |||||||||||||||||    
T  4621442 tcaacccatttggggttggcctagtggttggcttgggatcttggagtttgctcctcc 4621386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 156 - 210
Target Start/End: Complemental strand, 7197449 - 7197395
Alignment:
Q  156 aacctatttggggttggtctagtggttgacttgggattttggagtttgctcctcc 210  Q
    |||| |||||||||||| |||||||||| |||||||| |||||||||||||||||    
T  7197449 aacccatttggggttggcctagtggttggcttgggatcttggagtttgctcctcc 7197395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 156 - 210
Target Start/End: Original strand, 8077641 - 8077695
Alignment:
Q  156 aacctatttggggttggtctagtggttgacttgggattttggagtttgctcctcc 210  Q
    |||| |||||||||||| |||||||||| |||||||| |||||||||||||||||    
T  8077641 aacccatttggggttggcctagtggttggcttgggatcttggagtttgctcctcc 8077695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 156 - 210
Target Start/End: Original strand, 24674387 - 24674441
Alignment:
Q  156 aacctatttggggttggtctagtggttgacttgggattttggagtttgctcctcc 210  Q
    |||| |||||||||||| |||||||||| |||||||| |||||||||||||||||    
T  24674387 aacccatttggggttggcctagtggttggcttgggatcttggagtttgctcctcc 24674441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 156 - 210
Target Start/End: Original strand, 34778336 - 34778390
Alignment:
Q  156 aacctatttggggttggtctagtggttgacttgggattttggagtttgctcctcc 210  Q
    |||| |||||||||||| |||||||||| |||||||| |||||||||||||||||    
T  34778336 aacccatttggggttggcctagtggttggcttgggatcttggagtttgctcctcc 34778390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 161 - 210
Target Start/End: Original strand, 1378744 - 1378793
Alignment:
Q  161 atttggggttggtctagtggttgacttgggattttggagtttgctcctcc 210  Q
    ||||||||||||||||||||||||||||| || ||||||||| |||||||    
T  1378744 atttggggttggtctagtggttgacttggaatcttggagtttactcctcc 1378793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 161 - 208
Target Start/End: Original strand, 2272343 - 2272390
Alignment:
Q  161 atttggggttggtctagtggttgacttgggattttggagtttgctcct 208  Q
    |||||||||||| ||||||||||||||||||| || ||||||||||||    
T  2272343 atttggggttggcctagtggttgacttgggatcttagagtttgctcct 2272390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 155 - 210
Target Start/End: Complemental strand, 20487394 - 20487339
Alignment:
Q  155 caacctatttggggttggtctagtggttgacttgggattttggagtttgctcctcc 210  Q
    ||||| ||||||||||||| ||||||||| || ||||| |||||||||||||||||    
T  20487394 caacccatttggggttggtttagtggttggctcgggatcttggagtttgctcctcc 20487339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 156 - 210
Target Start/End: Complemental strand, 15059605 - 15059551
Alignment:
Q  156 aacctatttggggttggtctagtggttgacttgggattttggagtttgctcctcc 210  Q
    |||| |||||||||||| |||||||||| ||||| || |||||||||||||||||    
T  15059605 aacccatttggggttggcctagtggttggcttggaatcttggagtttgctcctcc 15059551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 153 - 210
Target Start/End: Original strand, 1378889 - 1378946
Alignment:
Q  153 gtcaacctatttggggttggtctagtggttgacttgggattttggagtttgctcctcc 210  Q
    ||||||| ||||  ||||||  |||||||||||||||||| |||||||||||||||||    
T  1378889 gtcaacccatttaaggttggcttagtggttgacttgggatcttggagtttgctcctcc 1378946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 156 - 209
Target Start/End: Original strand, 32729539 - 32729592
Alignment:
Q  156 aacctatttggggttggtctagtggttgacttgggattttggagtttgctcctc 209  Q
    |||| |||||||||||| |||||||||| |||||||| || |||||||||||||    
T  32729539 aacccatttggggttggcctagtggttggcttgggatcttcgagtttgctcctc 32729592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 161 - 210
Target Start/End: Complemental strand, 46113600 - 46113551
Alignment:
Q  161 atttggggttggtctagtggttgacttgggattttggagtttgctcctcc 210  Q
    |||||||||||| ||||||||||  ||||||| |||||||||||||||||    
T  46113600 atttggggttggcctagtggttggtttgggatcttggagtttgctcctcc 46113551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 160 - 200
Target Start/End: Complemental strand, 1095194 - 1095154
Alignment:
Q  160 tatttggggttggtctagtggttgacttgggattttggagt 200  Q
    |||||||||||||||||||||||| |||||||| |||||||    
T  1095194 tatttggggttggtctagtggttggcttgggatcttggagt 1095154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 156 - 192
Target Start/End: Complemental strand, 8879296 - 8879260
Alignment:
Q  156 aacctatttggggttggtctagtggttgacttgggat 192  Q
    ||||||||| |||||||||||||||||||||||||||    
T  8879296 aacctatttagggttggtctagtggttgacttgggat 8879260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 161 - 209
Target Start/End: Original strand, 24216977 - 24217025
Alignment:
Q  161 atttggggttggtctagtggttgacttgggattttggagtttgctcctc 209  Q
    |||||||||||  ||||||||||||||||||| ||||||| ||||||||    
T  24216977 atttggggttgacctagtggttgacttgggatcttggagtgtgctcctc 24217025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 154 - 210
Target Start/End: Complemental strand, 29057542 - 29057486
Alignment:
Q  154 tcaacctatttggggttggtctagtggttgacttgggattttggagtttgctcctcc 210  Q
    |||||| |||||||||||| ||||||||||  ||||||| |||||||||||| ||||    
T  29057542 tcaacccatttggggttggcctagtggttggtttgggatcttggagtttgctgctcc 29057486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 161 - 209
Target Start/End: Original strand, 37349522 - 37349570
Alignment:
Q  161 atttggggttggtctagtggttgacttgggattttggagtttgctcctc 209  Q
    ||||||||||||| |||||||||||||| ||| || |||||||||||||    
T  37349522 atttggggttggtttagtggttgacttgagatcttagagtttgctcctc 37349570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 155 - 207
Target Start/End: Original strand, 47091683 - 47091735
Alignment:
Q  155 caacctatttggggttggtctagtggttgacttgggattttggagtttgctcc 207  Q
    ||||| |||||||||||| |||||||||| |||| ||| ||||||||||||||    
T  47091683 caacccatttggggttggcctagtggttggcttgagatcttggagtttgctcc 47091735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 175 - 210
Target Start/End: Original strand, 17935782 - 17935817
Alignment:
Q  175 tagtggttgacttgggattttggagtttgctcctcc 210  Q
    |||||||||||||||||| |||||||||||||||||    
T  17935782 tagtggttgacttgggatcttggagtttgctcctcc 17935817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 156 - 210
Target Start/End: Complemental strand, 7766930 - 7766876
Alignment:
Q  156 aacctatttggggttggtctagtggttgacttgggattttggagtttgctcctcc 210  Q
    |||| ||| |||||||| |||||||||  |||||||| |||||||||||||||||    
T  7766930 aacccattcggggttggcctagtggttagcttgggatcttggagtttgctcctcc 7766876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 156 - 206
Target Start/End: Complemental strand, 23232468 - 23232418
Alignment:
Q  156 aacctatttggggttggtctagtggttgacttgggattttggagtttgctc 206  Q
    |||| ||||||| |||| ||||||||||||||||||| ||| |||||||||    
T  23232468 aacccatttgggattggcctagtggttgacttgggatcttgaagtttgctc 23232418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 161 - 210
Target Start/End: Original strand, 24122022 - 24122071
Alignment:
Q  161 atttggggttggtctagtggttgacttgggattttggagtttgctcctcc 210  Q
    ||||||||||||  ||||||||| |||||||| |||| ||||||||||||    
T  24122022 atttggggttggcttagtggttggcttgggatcttggggtttgctcctcc 24122071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 156 - 209
Target Start/End: Complemental strand, 25496691 - 25496638
Alignment:
Q  156 aacctatttggggttggtctagtggttgacttgggattttggagtttgctcctc 209  Q
    ||||||||||| ||||| |||||| ||| |||||||| |||||| |||||||||    
T  25496691 aacctatttggcgttggcctagtgattggcttgggatcttggagattgctcctc 25496638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 161 - 209
Target Start/End: Complemental strand, 9926346 - 9926298
Alignment:
Q  161 atttggggttggtctagtggttgacttgggattttggagtttgctcctc 209  Q
    |||||| | ||||||||| ||||||||||||| ||||||| ||||||||    
T  9926346 atttggagctggtctagtagttgacttgggatcttggagtgtgctcctc 9926298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 21)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 161 - 209
Target Start/End: Original strand, 9843937 - 9843985
Alignment:
Q  161 atttggggttggtctagtggttgacttgggattttggagtttgctcctc 209  Q
    ||||||||||||||||||||||| |||||||| ||||||||||||||||    
T  9843937 atttggggttggtctagtggttggcttgggatcttggagtttgctcctc 9843985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 155 - 210
Target Start/End: Original strand, 9238968 - 9239023
Alignment:
Q  155 caacctatttggggttggtctagtggttgacttgggattttggagtttgctcctcc 210  Q
    ||||| |||||||||||| |||||||||| |||||||| |||||||||||||||||    
T  9238968 caacccatttggggttggcctagtggttggcttgggatcttggagtttgctcctcc 9239023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 156 - 210
Target Start/End: Original strand, 11007159 - 11007213
Alignment:
Q  156 aacctatttggggttggtctagtggttgacttgggattttggagtttgctcctcc 210  Q
    |||| ||||||||||| ||||||||||| |||||||| |||||||||||||||||    
T  11007159 aacccatttggggttgatctagtggttggcttgggatcttggagtttgctcctcc 11007213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 156 - 210
Target Start/End: Original strand, 12591631 - 12591685
Alignment:
Q  156 aacctatttggggttggtctagtggttgacttgggattttggagtttgctcctcc 210  Q
    |||| |||||||||||| |||||||||| |||||||| |||||||||||||||||    
T  12591631 aacccatttggggttggcctagtggttggcttgggatcttggagtttgctcctcc 12591685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 156 - 210
Target Start/End: Complemental strand, 15360301 - 15360247
Alignment:
Q  156 aacctatttggggttggtctagtggttgacttgggattttggagtttgctcctcc 210  Q
    |||| |||||||||||| |||||||||| |||||||| |||||||||||||||||    
T  15360301 aacccatttggggttggcctagtggttggcttgggatcttggagtttgctcctcc 15360247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 156 - 210
Target Start/End: Original strand, 22576061 - 22576115
Alignment:
Q  156 aacctatttggggttggtctagtggttgacttgggattttggagtttgctcctcc 210  Q
    |||| |||||||||||| |||||||||| |||||||| |||||||||||||||||    
T  22576061 aacccatttggggttggcctagtggttggcttgggatcttggagtttgctcctcc 22576115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 156 - 209
Target Start/End: Original strand, 28672061 - 28672114
Alignment:
Q  156 aacctatttggggttggtctagtggttgacttgggattttggagtttgctcctc 209  Q
    |||| |||||||||||| ||||||||||||||| ||| ||||||||||||||||    
T  28672061 aacccatttggggttggcctagtggttgacttgagatcttggagtttgctcctc 28672114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 161 - 209
Target Start/End: Original strand, 8479311 - 8479359
Alignment:
Q  161 atttggggttggtctagtggttgacttgggattttggagtttgctcctc 209  Q
    |||||||||||| ||||||||||||||||||| ||||||| ||||||||    
T  8479311 atttggggttggcctagtggttgacttgggatcttggagtgtgctcctc 8479359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 162 - 210
Target Start/End: Original strand, 11448871 - 11448919
Alignment:
Q  162 tttggggttggtctagtggttgacttgggattttggagtttgctcctcc 210  Q
    ||||||||||| |||||||||| |||||||| |||||||||||||||||    
T  11448871 tttggggttggcctagtggttggcttgggatcttggagtttgctcctcc 11448919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 155 - 210
Target Start/End: Original strand, 13753233 - 13753288
Alignment:
Q  155 caacctatttggggttggtctagtggttgacttgggattttggagtttgctcctcc 210  Q
    ||||| |||||||||||| |||||||||| ||| |||| |||||||||||||||||    
T  13753233 caacccatttggggttggcctagtggttggctttggatcttggagtttgctcctcc 13753288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 156 - 210
Target Start/End: Complemental strand, 654349 - 654295
Alignment:
Q  156 aacctatttggggttggtctagtggttgacttgggattttggagtttgctcctcc 210  Q
    |||| ||||||| |||| ||||||| ||||||||||| |||||||||||||||||    
T  654349 aacccatttgggtttggcctagtggctgacttgggatcttggagtttgctcctcc 654295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 156 - 206
Target Start/End: Original strand, 34147340 - 34147390
Alignment:
Q  156 aacctatttggggttggtctagtggttgacttgggattttggagtttgctc 206  Q
    |||| |||||||||||| |||||||||| |||||||| |||||||||||||    
T  34147340 aacccatttggggttggcctagtggttggcttgggatcttggagtttgctc 34147390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 156 - 206
Target Start/End: Original strand, 34159956 - 34160006
Alignment:
Q  156 aacctatttggggttggtctagtggttgacttgggattttggagtttgctc 206  Q
    |||| |||||||||||| |||||||||| |||||||| |||||||||||||    
T  34159956 aacccatttggggttggcctagtggttggcttgggatcttggagtttgctc 34160006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 156 - 209
Target Start/End: Complemental strand, 3222837 - 3222784
Alignment:
Q  156 aacctatttggggttggtctagtggttgacttgggattttggagtttgctcctc 209  Q
    |||| |||||||||||| |||||||||| |||||||| ||| ||||||||||||    
T  3222837 aacccatttggggttggcctagtggttggcttgggatcttgcagtttgctcctc 3222784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 21 - 73
Target Start/End: Original strand, 3386570 - 3386623
Alignment:
Q  21 tgaattgatttttaaaagacatgcttaccat-aagcaaatgaatgtttttaaaa 73  Q
    ||||||||| |||  |||||||||||||||| ||||||||||||||||||||||    
T  3386570 tgaattgatctttctaagacatgcttaccattaagcaaatgaatgtttttaaaa 3386623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 156 - 209
Target Start/End: Original strand, 9208246 - 9208299
Alignment:
Q  156 aacctatttggggttggtctagtggttgacttgggattttggagtttgctcctc 209  Q
    |||| ||||||||||| |||||||||||  ||||||| ||||||||||||||||    
T  9208246 aacccatttggggttgttctagtggttggattgggatcttggagtttgctcctc 9208299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 161 - 210
Target Start/End: Complemental strand, 21982518 - 21982469
Alignment:
Q  161 atttggggttggtctagtggttgacttgggattttggagtttgctcctcc 210  Q
    |||||||||||| |||||||||| |||||||| ||| |||||||||||||    
T  21982518 atttggggttggcctagtggttggcttgggatcttgaagtttgctcctcc 21982469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 156 - 209
Target Start/End: Original strand, 33499468 - 33499521
Alignment:
Q  156 aacctatttggggttggtctagtggttgacttgggattttggagtttgctcctc 209  Q
    |||| |||||||||||| || ||||||| |||||||| ||||||||||||||||    
T  33499468 aacccatttggggttggcctggtggttggcttgggatcttggagtttgctcctc 33499521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 155 - 210
Target Start/End: Complemental strand, 17081258 - 17081203
Alignment:
Q  155 caacctatttggggttggtctagtggttgacttgggattttggagtttgctcctcc 210  Q
    ||||| ||||| |||| |||||||||||| ||| |||| |||||||||||||||||    
T  17081258 caacccatttgaggttagtctagtggttggcttaggatcttggagtttgctcctcc 17081203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 177 - 210
Target Start/End: Complemental strand, 17706489 - 17706456
Alignment:
Q  177 gtggttgacttgggattttggagtttgctcctcc 210  Q
    |||||||||||||||| |||||||||||||||||    
T  17706489 gtggttgacttgggatcttggagtttgctcctcc 17706456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 156 - 205
Target Start/End: Complemental strand, 21148713 - 21148664
Alignment:
Q  156 aacctatttggggttggtctagtggttgacttgggattttggagtttgct 205  Q
    |||| |||||| ||||| |||||||||| |||||||| ||||||||||||    
T  21148713 aacccatttggagttggcctagtggttggcttgggatcttggagtttgct 21148664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 40; Significance: 0.00000000000008; HSPs: 29)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 154 - 209
Target Start/End: Complemental strand, 40059057 - 40059002
Alignment:
Q  154 tcaacctatttggggttggtctagtggttgacttgggattttggagtttgctcctc 209  Q
    |||||| |||||||||||| |||||||||| |||||||| ||||||||||||||||    
T  40059057 tcaacccatttggggttggcctagtggttggcttgggatcttggagtttgctcctc 40059002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 155 - 210
Target Start/End: Original strand, 46714385 - 46714440
Alignment:
Q  155 caacctatttggggttggtctagtggttgacttgggattttggagtttgctcctcc 210  Q
    ||||| |||||||||||| |||||||||| |||||||| |||||||||||||||||    
T  46714385 caacccatttggggttggcctagtggttggcttgggatcttggagtttgctcctcc 46714440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 156 - 210
Target Start/End: Original strand, 25852208 - 25852262
Alignment:
Q  156 aacctatttggggttggtctagtggttgacttgggattttggagtttgctcctcc 210  Q
    |||| |||||||||||| |||||||||| |||||||| |||||||||||||||||    
T  25852208 aacccatttggggttggcctagtggttggcttgggatcttggagtttgctcctcc 25852262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 156 - 210
Target Start/End: Original strand, 32986191 - 32986245
Alignment:
Q  156 aacctatttggggttggtctagtggttgacttgggattttggagtttgctcctcc 210  Q
    |||| |||||||||||| |||||||||| |||||||| |||||||||||||||||    
T  32986191 aacccatttggggttggcctagtggttggcttgggatcttggagtttgctcctcc 32986245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 156 - 210
Target Start/End: Original strand, 34722164 - 34722218
Alignment:
Q  156 aacctatttggggttggtctagtggttgacttgggattttggagtttgctcctcc 210  Q
    |||||||||||||||||  ||||||||| |||||||| |||||||||||||||||    
T  34722164 aacctatttggggttggcttagtggttggcttgggatcttggagtttgctcctcc 34722218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 156 - 210
Target Start/End: Complemental strand, 54127545 - 54127491
Alignment:
Q  156 aacctatttggggttggtctagtggttgacttgggattttggagtttgctcctcc 210  Q
    |||| |||||||||||| |||||||||| |||||||| |||||||||||||||||    
T  54127545 aacccatttggggttggcctagtggttggcttgggatcttggagtttgctcctcc 54127491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 161 - 210
Target Start/End: Original strand, 20566348 - 20566397
Alignment:
Q  161 atttggggttggtctagtggttgacttgggattttggagtttgctcctcc 210  Q
    |||||||||||| |||||||||| |||||||| |||||||||||||||||    
T  20566348 atttggggttggcctagtggttggcttgggatcttggagtttgctcctcc 20566397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 161 - 210
Target Start/End: Original strand, 51535612 - 51535661
Alignment:
Q  161 atttggggttggtctagtggttgacttgggattttggagtttgctcctcc 210  Q
    |||| ||||||| ||||||||||||||||||| |||||||||||||||||    
T  51535612 atttagggttggcctagtggttgacttgggatcttggagtttgctcctcc 51535661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 161 - 209
Target Start/End: Original strand, 34835528 - 34835576
Alignment:
Q  161 atttggggttggtctagtggttgacttgggattttggagtttgctcctc 209  Q
    ||||||||||||||||||||||| |||||||| || |||||||||||||    
T  34835528 atttggggttggtctagtggttggcttgggatcttagagtttgctcctc 34835576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 161 - 209
Target Start/End: Original strand, 42245745 - 42245793
Alignment:
Q  161 atttggggttggtctagtggttgacttgggattttggagtttgctcctc 209  Q
    |||||||||||| ||||||||||||||||||| || |||||||||||||    
T  42245745 atttggggttggcctagtggttgacttgggatcttagagtttgctcctc 42245793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 155 - 210
Target Start/End: Original strand, 52983612 - 52983667
Alignment:
Q  155 caacctatttggggttggtctagtggttgacttgggattttggagtttgctcctcc 210  Q
    ||||| |||||||||||| |||||||||| |||| ||| |||||||||||||||||    
T  52983612 caacccatttggggttggcctagtggttggcttgagatcttggagtttgctcctcc 52983667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 156 - 210
Target Start/End: Original strand, 1985830 - 1985884
Alignment:
Q  156 aacctatttggggttggtctagtggttgacttgggattttggagtttgctcctcc 210  Q
    |||| ||||||| |||| |||||||||| |||||||| |||||||||||||||||    
T  1985830 aacccatttgggattggcctagtggttggcttgggatcttggagtttgctcctcc 1985884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 156 - 206
Target Start/End: Complemental strand, 5609405 - 5609355
Alignment:
Q  156 aacctatttggggttggtctagtggttgacttgggattttggagtttgctc 206  Q
    |||| |||||||||||| |||||||||| |||||||| |||||||||||||    
T  5609405 aacccatttggggttggcctagtggttggcttgggatcttggagtttgctc 5609355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 156 - 210
Target Start/End: Complemental strand, 19660735 - 19660681
Alignment:
Q  156 aacctatttggggttggtctagtggttgacttgggattttggagtttgctcctcc 210  Q
    |||| |||||| ||||| |||||||||| |||||||| |||||||||||||||||    
T  19660735 aacccatttggagttggcctagtggttggcttgggatcttggagtttgctcctcc 19660681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 160 - 210
Target Start/End: Original strand, 32942368 - 32942418
Alignment:
Q  160 tatttggggttggtctagtggttgacttgggattttggagtttgctcctcc 210  Q
    |||||||||||||||||||||||| |||| ||| ||||||||| |||||||    
T  32942368 tatttggggttggtctagtggttggcttgagatcttggagtttactcctcc 32942418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 156 - 210
Target Start/End: Complemental strand, 33696482 - 33696428
Alignment:
Q  156 aacctatttggggttggtctagtggttgacttgggattttggagtttgctcctcc 210  Q
    |||| |||| ||||||| |||||||||| |||||||| |||||||||||||||||    
T  33696482 aacccatttagggttggcctagtggttggcttgggatcttggagtttgctcctcc 33696428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 161 - 210
Target Start/End: Complemental strand, 43719263 - 43719214
Alignment:
Q  161 atttggggttggtctagtggttgacttgggattttggagtttgctcctcc 210  Q
    |||||||||||||||||||||||  ||| ||| |||||||||||||||||    
T  43719263 atttggggttggtctagtggttggtttgagatcttggagtttgctcctcc 43719214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 166 - 210
Target Start/End: Original strand, 35229172 - 35229216
Alignment:
Q  166 gggttggtctagtggttgacttgggattttggagtttgctcctcc 210  Q
    ||||||| |||||||||| |||||||| |||||||||||||||||    
T  35229172 gggttggcctagtggttggcttgggatcttggagtttgctcctcc 35229216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 156 - 207
Target Start/End: Original strand, 44343507 - 44343559
Alignment:
Q  156 aacctatttggggttggtctagtgg-ttgacttgggattttggagtttgctcc 207  Q
    ||||||||||||||||| ||||||| ||| |||||||| ||||||||||||||    
T  44343507 aacctatttggggttgggctagtggtttggcttgggatcttggagtttgctcc 44343559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 162 - 210
Target Start/End: Complemental strand, 55961939 - 55961891
Alignment:
Q  162 tttggggttggtctagtggttgacttgggattttggagtttgctcctcc 210  Q
    |||||| |||| |||||||||| |||||||| |||||||||||||||||    
T  55961939 tttgggattggcctagtggttggcttgggatcttggagtttgctcctcc 55961891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 161 - 208
Target Start/End: Complemental strand, 13873493 - 13873446
Alignment:
Q  161 atttggggttggtctagtggttgacttgggattttggagtttgctcct 208  Q
    |||||||||||| |||||||||  |||||||| |||||||||||||||    
T  13873493 atttggggttggcctagtggtttgcttgggatcttggagtttgctcct 13873446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 155 - 210
Target Start/End: Complemental strand, 34844962 - 34844907
Alignment:
Q  155 caacctatttggggttggtctagtggttgacttgggattttggagtttgctcctcc 210  Q
    ||||| |||||||||||| |||||||||  |||| ||| |||||||||||||||||    
T  34844962 caacccatttggggttggcctagtggtttgcttgagatcttggagtttgctcctcc 34844907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 164 - 210
Target Start/End: Complemental strand, 27528990 - 27528944
Alignment:
Q  164 tggggttggtctagtggttgacttgggattttggagtttgctcctcc 210  Q
    |||||||||  ||||||||| |||||||| |||||||||||||||||    
T  27528990 tggggttggcttagtggttggcttgggatcttggagtttgctcctcc 27528944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 156 - 206
Target Start/End: Complemental strand, 35674944 - 35674894
Alignment:
Q  156 aacctatttggggttggtctagtggttgacttgggattttggagtttgctc 206  Q
    |||| |||||||||||| | |||||||| |||||||| |||||||||||||    
T  35674944 aacccatttggggttggccaagtggttggcttgggatcttggagtttgctc 35674894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 156 - 209
Target Start/End: Complemental strand, 41621799 - 41621746
Alignment:
Q  156 aacctatttggggttggtctagtggttgacttgggattttggagtttgctcctc 209  Q
    |||| |||||||||||| ||| |||||| |||| ||| ||||||||||||||||    
T  41621799 aacccatttggggttggcctaatggttggcttgagatcttggagtttgctcctc 41621746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 160 - 208
Target Start/End: Complemental strand, 9646415 - 9646367
Alignment:
Q  160 tatttggggttggtctagtggttgacttgggattttggagtttgctcct 208  Q
    ||||||||||||||||||||||||  ||||||| || |||| |||||||    
T  9646415 tatttggggttggtctagtggttggtttgggatctttgagtgtgctcct 9646367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 163 - 203
Target Start/End: Original strand, 10125783 - 10125823
Alignment:
Q  163 ttggggttggtctagtggttgacttgggattttggagtttg 203  Q
    |||| ||||| ||||||||||||||||||| ||||||||||    
T  10125783 ttggagttggcctagtggttgacttgggatcttggagtttg 10125823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 161 - 209
Target Start/End: Original strand, 13550207 - 13550255
Alignment:
Q  161 atttggggttggtctagtggttgacttgggattttggagtttgctcctc 209  Q
    ||||| |||||| ||||||||||||||| ||| | ||||||||||||||    
T  13550207 atttgcggttggcctagtggttgacttgagatctgggagtttgctcctc 13550255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 161 - 205
Target Start/End: Original strand, 40252297 - 40252341
Alignment:
Q  161 atttggggttggtctagtggttgacttgggattttggagtttgct 205  Q
    |||||||||||||||||| |||||||||| || ||||||| ||||    
T  40252297 atttggggttggtctagtagttgacttggaatcttggagtgtgct 40252341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0576 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0576
Description:

Target: scaffold0576; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 156 - 210
Target Start/End: Complemental strand, 5285 - 5231
Alignment:
Q  156 aacctatttggggttggtctagtggttgacttgggattttggagtttgctcctcc 210  Q
    |||| |||||||||||| |||||||||| |||||||| |||||||||||||||||    
T  5285 aacccatttggggttggcctagtggttggcttgggatcttggagtttgctcctcc 5231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0240 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0240
Description:

Target: scaffold0240; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 156 - 210
Target Start/End: Complemental strand, 12957 - 12903
Alignment:
Q  156 aacctatttggggttggtctagtggttgacttgggattttggagtttgctcctcc 210  Q
    |||||||||||| |||| ||||||||||||||||||| |||||||| ||||||||    
T  12957 aacctatttgggattggcctagtggttgacttgggatcttggagttcgctcctcc 12903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0217 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0217
Description:

Target: scaffold0217; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 156 - 210
Target Start/End: Complemental strand, 7512 - 7458
Alignment:
Q  156 aacctatttggggttggtctagtggttgacttgggattttggagtttgctcctcc 210  Q
    ||||||||||||||||| ||||| |||| |||||||| |||||||||||||||||    
T  7512 aacctatttggggttggcctagtagttggcttgggatcttggagtttgctcctcc 7458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0199 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0199
Description:

Target: scaffold0199; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 156 - 210
Target Start/End: Complemental strand, 8610 - 8556
Alignment:
Q  156 aacctatttggggttggtctagtggttgacttgggattttggagtttgctcctcc 210  Q
    |||| |||||||||||| |||||||||| |||||||| |||||||||||||||||    
T  8610 aacccatttggggttggcctagtggttggcttgggatcttggagtttgctcctcc 8556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 156 - 210
Target Start/End: Original strand, 66756 - 66810
Alignment:
Q  156 aacctatttggggttggtctagtggttgacttgggattttggagtttgctcctcc 210  Q
    |||| ||||||| ||||||||||||||| |||||||| |||||||||||||||||    
T  66756 aacccatttgggattggtctagtggttggcttgggatcttggagtttgctcctcc 66810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0623 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0623
Description:

Target: scaffold0623; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 161 - 210
Target Start/End: Complemental strand, 1254 - 1205
Alignment:
Q  161 atttggggttggtctagtggttgacttgggattttggagtttgctcctcc 210  Q
    |||||||||||| |||||||||| |||||||| |||||||||||||||||    
T  1254 atttggggttggcctagtggttggcttgggatcttggagtttgctcctcc 1205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0459 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0459
Description:

Target: scaffold0459; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 161 - 210
Target Start/End: Complemental strand, 10891 - 10842
Alignment:
Q  161 atttggggttggtctagtggttgacttgggattttggagtttgctcctcc 210  Q
    |||||||||||| |||||||||| |||||||| |||||||||||||||||    
T  10891 atttggggttggcctagtggttggcttgggatcttggagtttgctcctcc 10842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0366 (Bit Score: 38; Significance: 0.000000000001; HSPs: 2)
Name: scaffold0366
Description:

Target: scaffold0366; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 161 - 210
Target Start/End: Complemental strand, 9497 - 9448
Alignment:
Q  161 atttggggttggtctagtggttgacttgggattttggagtttgctcctcc 210  Q
    |||||||||||| |||||||||| |||||||| |||||||||||||||||    
T  9497 atttggggttggcctagtggttggcttgggatcttggagtttgctcctcc 9448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0366; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 161 - 210
Target Start/End: Complemental strand, 12198 - 12149
Alignment:
Q  161 atttggggttggtctagtggttgacttgggattttggagtttgctcctcc 210  Q
    |||||||||||| |||||||||| |||||||| |||||||||||||||||    
T  12198 atttggggttggcctagtggttggcttgggatcttggagtttgctcctcc 12149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0460 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0460
Description:

Target: scaffold0460; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 155 - 210
Target Start/End: Complemental strand, 8383 - 8328
Alignment:
Q  155 caacctatttggggttggtctagtggttgacttgggattttggagtttgctcctcc 210  Q
    ||||| ||||||||||||| ||||||||| || ||||| |||||||||||||||||    
T  8383 caacccatttggggttggtttagtggttggctcgggatcttggagtttgctcctcc 8328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0328 (Bit Score: 35; Significance: 0.00000000007; HSPs: 1)
Name: scaffold0328
Description:

Target: scaffold0328; HSP #1
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 156 - 210
Target Start/End: Original strand, 14985 - 15039
Alignment:
Q  156 aacctatttggggttggtctagtggttgacttgggattttggagtttgctcctcc 210  Q
    |||| |||||||||||| |||||||||| | |||||| |||||||||||||||||    
T  14985 aacccatttggggttggcctagtggttggcctgggatcttggagtttgctcctcc 15039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 35; Significance: 0.00000000007; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 156 - 210
Target Start/End: Complemental strand, 97569 - 97515
Alignment:
Q  156 aacctatttggggttggtctagtggttgacttgggattttggagtttgctcctcc 210  Q
    |||| |||||||||||| |||||||||| |||||||| ||| |||||||||||||    
T  97569 aacccatttggggttggcctagtggttggcttgggatcttgtagtttgctcctcc 97515  T

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Target: scaffold0051 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0051
Description:

Target: scaffold0051; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 161 - 210
Target Start/End: Complemental strand, 53069 - 53020
Alignment:
Q  161 atttggggttggtctagtggttgacttgggattttggagtttgctcctcc 210  Q
    ||||||| |||| |||||||||| |||||||| |||||||||||||||||    
T  53069 atttgggattggcctagtggttggcttgggatcttggagtttgctcctcc 53020  T

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Target: scaffold0070 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0070
Description:

Target: scaffold0070; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 156 - 208
Target Start/End: Original strand, 40319 - 40371
Alignment:
Q  156 aacctatttggggttggtctagtggttgacttgggattttggagtttgctcct 208  Q
    |||| |||||||||||| |||||||||| ||| |||| |||||||||||||||    
T  40319 aacccatttggggttggcctagtggttggcttaggatcttggagtttgctcct 40371  T

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