View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF3340_low_7 (Length: 280)

Name: NF3340_low_7
Description: NF3340
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF3340_low_7
NF3340_low_7
[»] chr1 (44 HSPs)
chr1 (1-191)||(33526236-33526426)
chr1 (186-258)||(43452996-43453068)
chr1 (186-258)||(8250674-8250746)
chr1 (186-258)||(33525994-33526065)
chr1 (186-258)||(38786777-38786849)
chr1 (191-258)||(26476840-26476907)
chr1 (186-258)||(1821460-1821532)
chr1 (186-258)||(25815693-25815765)
chr1 (186-258)||(44963503-44963575)
chr1 (197-258)||(12685760-12685821)
chr1 (186-258)||(5117265-5117337)
chr1 (186-258)||(7075161-7075233)
chr1 (186-258)||(10100344-10100416)
chr1 (186-258)||(26544033-26544105)
chr1 (186-258)||(31651732-31651804)
chr1 (186-258)||(40058798-40058870)
chr1 (192-255)||(23337977-23338040)
chr1 (186-256)||(47912446-47912516)
chr1 (186-250)||(2611912-2611976)
chr1 (186-258)||(5606222-5606294)
chr1 (186-258)||(10648030-10648101)
chr1 (186-258)||(41414368-41414440)
chr1 (186-258)||(44741508-44741580)
chr1 (186-258)||(45299484-45299556)
chr1 (186-258)||(52688696-52688768)
chr1 (186-253)||(5945930-5945997)
chr1 (186-257)||(48312193-48312264)
chr1 (187-258)||(52141884-52141955)
chr1 (186-253)||(52749446-52749513)
chr1 (186-236)||(33730050-33730100)
chr1 (186-243)||(50014407-50014464)
chr1 (186-258)||(10124274-10124346)
chr1 (186-258)||(44452361-44452433)
chr1 (186-230)||(48389232-48389276)
chr1 (186-232)||(4489226-4489272)
chr1 (186-232)||(23393397-23393443)
chr1 (186-232)||(28490325-28490371)
chr1 (186-232)||(31932036-31932082)
chr1 (192-225)||(2138893-2138926)
chr1 (186-251)||(31745906-31745971)
chr1 (186-255)||(40883575-40883644)
chr1 (186-227)||(49903548-49903589)
chr1 (186-258)||(43452865-43452937)
chr1 (186-255)||(48613915-48613986)
[»] chr3 (49 HSPs)
chr3 (187-258)||(43398992-43399063)
chr3 (186-255)||(1334123-1334192)
chr3 (186-258)||(36594240-36594312)
chr3 (186-258)||(44821356-44821428)
chr3 (186-258)||(10228551-10228623)
chr3 (186-258)||(16434679-16434751)
chr3 (186-258)||(29793200-29793272)
chr3 (186-258)||(36178958-36179030)
chr3 (192-258)||(29444875-29444941)
chr3 (186-260)||(32961411-32961485)
chr3 (186-243)||(38878315-38878372)
chr3 (186-258)||(900910-900982)
chr3 (186-258)||(1778526-1778598)
chr3 (186-258)||(3817888-3817960)
chr3 (190-258)||(9997702-9997770)
chr3 (186-258)||(12948205-12948277)
chr3 (186-258)||(26759643-26759715)
chr3 (186-258)||(29720560-29720632)
chr3 (186-258)||(42098449-42098521)
chr3 (186-258)||(47339906-47339978)
chr3 (191-258)||(53019998-53020065)
chr3 (186-232)||(4229036-4229082)
chr3 (184-258)||(50673840-50673914)
chr3 (186-227)||(28958852-28958893)
chr3 (190-258)||(10106206-10106274)
chr3 (190-258)||(10232307-10232375)
chr3 (186-258)||(34669773-34669845)
chr3 (186-226)||(43394413-43394453)
chr3 (186-233)||(4465046-4465093)
chr3 (186-225)||(9484761-9484800)
chr3 (186-225)||(12250468-12250507)
chr3 (191-258)||(29588545-29588612)
chr3 (186-225)||(34263559-34263598)
chr3 (186-225)||(34555316-34555355)
chr3 (186-225)||(48927657-48927696)
chr3 (186-225)||(49076281-49076320)
chr3 (186-233)||(49818922-49818969)
chr3 (186-225)||(53274850-53274889)
chr3 (186-232)||(4945699-4945745)
chr3 (192-258)||(29455530-29455596)
chr3 (186-232)||(33462870-33462916)
chr3 (192-242)||(38833551-38833601)
chr3 (195-257)||(43170148-43170210)
chr3 (192-225)||(14750915-14750948)
chr3 (186-227)||(18013323-18013364)
chr3 (188-233)||(31440479-31440524)
chr3 (186-258)||(34680347-34680419)
chr3 (186-226)||(36364617-36364657)
chr3 (186-226)||(39557439-39557479)
[»] chr8 (46 HSPs)
chr8 (186-255)||(8496713-8496782)
chr8 (186-258)||(44039990-44040062)
chr8 (186-258)||(21132752-21132824)
chr8 (186-258)||(30653526-30653598)
chr8 (190-258)||(38036682-38036750)
chr8 (188-258)||(3466453-3466523)
chr8 (186-251)||(27302027-27302092)
chr8 (186-258)||(761715-761787)
chr8 (186-226)||(2026737-2026777)
chr8 (186-230)||(5777406-5777450)
chr8 (186-258)||(14378511-14378583)
chr8 (186-258)||(23547233-23547305)
chr8 (186-258)||(29616150-29616222)
chr8 (186-242)||(36632034-36632090)
chr8 (186-258)||(37094297-37094369)
chr8 (186-254)||(44871496-44871564)
chr8 (186-258)||(44887539-44887611)
chr8 (191-258)||(17523973-17524040)
chr8 (186-257)||(40645847-40645918)
chr8 (186-232)||(4960316-4960362)
chr8 (192-258)||(30464603-30464669)
chr8 (193-258)||(67267-67332)
chr8 (186-227)||(44020904-44020945)
chr8 (186-255)||(44717460-44717529)
chr8 (186-250)||(1645238-1645302)
chr8 (186-258)||(4326943-4327015)
chr8 (186-258)||(14512005-14512077)
chr8 (186-258)||(20671421-20671493)
chr8 (186-258)||(43049093-43049165)
chr8 (186-225)||(15870340-15870379)
chr8 (186-225)||(23437670-23437709)
chr8 (186-225)||(25009309-25009348)
chr8 (186-225)||(29708726-29708765)
chr8 (192-255)||(38842334-38842397)
chr8 (186-225)||(42150007-42150046)
chr8 (186-232)||(14583771-14583817)
chr8 (186-232)||(25866234-25866280)
chr8 (192-258)||(28583126-28583192)
chr8 (192-258)||(43184602-43184668)
chr8 (186-232)||(44362086-44362132)
chr8 (192-225)||(25691454-25691487)
chr8 (186-227)||(29917783-29917824)
chr8 (201-258)||(44947185-44947242)
chr8 (186-258)||(8123803-8123875)
chr8 (186-226)||(18419163-18419203)
chr8 (190-258)||(32909224-32909292)
[»] chr2 (35 HSPs)
chr2 (186-255)||(45036528-45036597)
chr2 (186-258)||(11383871-11383943)
chr2 (187-258)||(2831874-2831945)
chr2 (186-253)||(26436518-26436585)
chr2 (186-258)||(44022433-44022505)
chr2 (186-253)||(18504637-18504704)
chr2 (186-255)||(16125912-16125981)
chr2 (190-258)||(7601223-7601291)
chr2 (186-258)||(8373599-8373671)
chr2 (186-258)||(10333404-10333476)
chr2 (186-258)||(20682807-20682879)
chr2 (186-253)||(1749003-1749070)
chr2 (186-225)||(38963960-38963999)
chr2 (186-236)||(20917775-20917825)
chr2 (186-232)||(22718395-22718441)
chr2 (192-258)||(40471907-40471973)
chr2 (192-258)||(41319750-41319816)
chr2 (193-258)||(4137581-4137646)
chr2 (186-255)||(16333644-16333713)
chr2 (186-258)||(7724436-7724508)
chr2 (186-226)||(12209154-12209194)
chr2 (186-258)||(15177534-15177606)
chr2 (186-258)||(31603243-31603315)
chr2 (186-258)||(41436997-41437069)
chr2 (186-225)||(5096413-5096452)
chr2 (202-257)||(8896452-8896507)
chr2 (194-253)||(9273790-9273849)
chr2 (186-225)||(37987795-37987834)
chr2 (186-233)||(41575727-41575774)
chr2 (186-232)||(6729955-6730001)
chr2 (186-232)||(37317041-37317087)
chr2 (192-258)||(42754181-42754247)
chr2 (186-258)||(15770908-15770980)
chr2 (186-258)||(16127607-16127679)
chr2 (186-258)||(25627188-25627260)
[»] chr7 (30 HSPs)
chr7 (186-258)||(41007784-41007856)
chr7 (186-255)||(9136492-9136561)
chr7 (186-258)||(38069216-38069288)
chr7 (188-258)||(5842285-5842355)
chr7 (186-258)||(3123973-3124045)
chr7 (186-258)||(16806973-16807045)
chr7 (186-258)||(18756754-18756825)
chr7 (190-258)||(25571519-25571587)
chr7 (186-258)||(35693657-35693729)
chr7 (186-258)||(38441978-38442050)
chr7 (186-258)||(48448683-48448755)
chr7 (186-258)||(40818522-40818596)
chr7 (186-227)||(4620229-4620270)
chr7 (186-258)||(9173163-9173235)
chr7 (186-258)||(19817500-19817572)
chr7 (186-258)||(46242305-46242377)
chr7 (186-236)||(25273866-25273916)
chr7 (196-258)||(26651075-26651137)
chr7 (193-251)||(32222724-32222782)
chr7 (186-231)||(14543638-14543683)
chr7 (186-255)||(31496477-31496545)
chr7 (186-255)||(33376939-33377008)
chr7 (186-231)||(38850867-38850912)
chr7 (186-258)||(32345610-32345682)
chr7 (186-258)||(36820041-36820113)
chr7 (186-258)||(47713259-47713331)
chr7 (186-225)||(27621155-27621194)
chr7 (186-227)||(32972193-32972234)
chr7 (192-257)||(41844941-41845006)
chr7 (186-258)||(36404753-36404825)
[»] chr6 (23 HSPs)
chr6 (186-258)||(12677145-12677217)
chr6 (186-257)||(16661433-16661504)
chr6 (186-258)||(10105976-10106048)
chr6 (186-258)||(2141733-2141805)
chr6 (186-258)||(6188487-6188559)
chr6 (192-258)||(2667156-2667222)
chr6 (186-258)||(6142338-6142410)
chr6 (186-258)||(16969544-16969616)
chr6 (186-258)||(17496159-17496231)
chr6 (186-258)||(29514858-29514930)
chr6 (186-232)||(26210912-26210958)
chr6 (186-258)||(30699426-30699499)
chr6 (186-258)||(995728-995800)
chr6 (186-258)||(2397935-2398007)
chr6 (186-258)||(2656501-2656573)
chr6 (194-258)||(4889957-4890021)
chr6 (186-258)||(31948474-31948545)
chr6 (186-258)||(35117441-35117513)
chr6 (186-225)||(2913062-2913101)
chr6 (186-257)||(10109243-10109314)
chr6 (186-225)||(24825330-24825369)
chr6 (186-225)||(32541341-32541380)
chr6 (204-258)||(33347968-33348022)
[»] chr4 (44 HSPs)
chr4 (186-258)||(17492832-17492904)
chr4 (186-252)||(1613050-1613116)
chr4 (186-258)||(29821215-29821287)
chr4 (190-258)||(24505680-24505748)
chr4 (186-254)||(30386996-30387064)
chr4 (186-258)||(37164182-37164254)
chr4 (186-258)||(39260517-39260589)
chr4 (186-258)||(47833970-47834042)
chr4 (186-258)||(55631701-55631773)
chr4 (186-243)||(6520600-6520657)
chr4 (186-258)||(1615704-1615776)
chr4 (190-258)||(2805997-2806065)
chr4 (186-258)||(8525242-8525314)
chr4 (186-258)||(28914533-28914605)
chr4 (186-258)||(37588356-37588428)
chr4 (186-258)||(48380921-48380993)
chr4 (186-258)||(51306060-51306132)
chr4 (186-253)||(54802889-54802956)
chr4 (187-233)||(1981232-1981278)
chr4 (192-258)||(39332656-39332722)
chr4 (186-255)||(39171123-39171192)
chr4 (186-255)||(42185439-42185508)
chr4 (186-227)||(52818547-52818588)
chr4 (186-258)||(3708418-3708490)
chr4 (186-258)||(43447330-43447402)
chr4 (186-258)||(50685085-50685157)
chr4 (186-225)||(10385013-10385052)
chr4 (191-258)||(11260872-11260939)
chr4 (186-233)||(31657208-31657255)
chr4 (186-225)||(40411467-40411506)
chr4 (186-253)||(42862124-42862191)
chr4 (186-233)||(44210314-44210361)
chr4 (186-232)||(1377973-1378019)
chr4 (186-232)||(28898923-28898969)
chr4 (186-232)||(28988246-28988292)
chr4 (186-224)||(37667634-37667672)
chr4 (192-258)||(48652643-48652709)
chr4 (193-258)||(4271840-4271905)
chr4 (192-225)||(43047558-43047591)
chr4 (186-258)||(46608378-46608451)
chr4 (186-258)||(24334204-24334276)
chr4 (186-258)||(29424811-29424883)
chr4 (190-258)||(48079874-48079942)
chr4 (186-258)||(51716696-51716768)
[»] scaffold0172 (1 HSPs)
scaffold0172 (190-258)||(19562-19630)
[»] chr5 (49 HSPs)
chr5 (186-253)||(8627300-8627368)
chr5 (186-255)||(1918660-1918729)
chr5 (186-255)||(14639545-14639614)
chr5 (186-238)||(2551474-2551526)
chr5 (186-258)||(9936715-9936787)
chr5 (186-258)||(14633172-14633244)
chr5 (186-258)||(26801928-26802000)
chr5 (186-258)||(26809478-26809550)
chr5 (186-258)||(41410487-41410559)
chr5 (186-255)||(6734947-6735016)
chr5 (186-255)||(30788370-30788439)
chr5 (186-258)||(1831515-1831587)
chr5 (186-258)||(2799797-2799869)
chr5 (186-258)||(2805963-2806035)
chr5 (192-236)||(13548384-13548428)
chr5 (186-258)||(20023025-20023097)
chr5 (190-258)||(26824505-26824573)
chr5 (190-258)||(27674386-27674454)
chr5 (186-258)||(27675705-27675777)
chr5 (186-258)||(39035725-39035797)
chr5 (186-258)||(39925369-39925441)
chr5 (186-258)||(40316982-40317054)
chr5 (186-253)||(39104111-39104178)
chr5 (186-232)||(14140083-14140129)
chr5 (184-258)||(20040242-20040316)
chr5 (186-240)||(21031799-21031853)
chr5 (186-258)||(1780972-1781044)
chr5 (190-254)||(1831233-1831297)
chr5 (186-226)||(14355664-14355704)
chr5 (186-258)||(30721512-30721584)
chr5 (186-258)||(32110469-32110541)
chr5 (190-254)||(40316700-40316764)
chr5 (190-258)||(40796899-40796967)
chr5 (190-254)||(41410777-41410841)
chr5 (186-233)||(10465147-10465194)
chr5 (186-225)||(14057873-14057912)
chr5 (186-225)||(30211601-30211640)
chr5 (186-253)||(30351903-30351970)
chr5 (186-256)||(967359-967429)
chr5 (192-258)||(14607385-14607451)
chr5 (192-258)||(33402418-33402484)
chr5 (192-225)||(1098346-1098379)
chr5 (193-258)||(19344526-19344591)
chr5 (186-255)||(31191007-31191076)
chr5 (186-243)||(41042679-41042736)
chr5 (186-258)||(20502875-20502947)
chr5 (186-226)||(40080146-40080186)
chr5 (190-254)||(40365719-40365783)
chr5 (186-258)||(41262956-41263028)
[»] scaffold0500 (1 HSPs)
scaffold0500 (197-258)||(504-565)
[»] scaffold0289 (1 HSPs)
scaffold0289 (186-255)||(9288-9357)
[»] scaffold0221 (1 HSPs)
scaffold0221 (186-258)||(5541-5613)
[»] scaffold0001 (1 HSPs)
scaffold0001 (186-255)||(184131-184200)
[»] scaffold0195 (1 HSPs)
scaffold0195 (190-258)||(72-140)
[»] scaffold1248 (1 HSPs)
scaffold1248 (186-236)||(1305-1355)
[»] scaffold0952 (1 HSPs)
scaffold0952 (186-236)||(958-1008)
[»] scaffold0281 (1 HSPs)
scaffold0281 (186-232)||(13270-13316)
[»] scaffold0283 (1 HSPs)
scaffold0283 (201-258)||(3163-3220)
[»] scaffold0385 (1 HSPs)
scaffold0385 (186-258)||(2047-2119)


Alignment Details
Target: chr1 (Bit Score: 171; Significance: 7e-92; HSPs: 44)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 171; E-Value: 7e-92
Query Start/End: Original strand, 1 - 191
Target Start/End: Complemental strand, 33526426 - 33526236
Alignment:
Q  1 ttaaagtgttgagagtgttctgtgttcattcattcacacgcgtacttaataatgtgccacgttttgctatctccaaccaggattttggtctttcatttag 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33526426 ttaaagtgttgagagtgttctgtgttcattcattcacacgcgtacttaataatgtgccacgttttgctatctccaaccaggattttggtctttcatttag 33526327  T
Q  101 tcaacctctgtcgacatgcatgccttgttagatgcttttttcattataacaagatactttctcttttaagaagataccgttactcttttct 191  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||| ||| || ||||||    
T  33526326 tcaacctctgtcgacatgcatgccttgttagatgcctttttcattataacaagatactctctcttttaagaagatactgttgcttttttct 33526236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 186 - 258
Target Start/End: Complemental strand, 43453068 - 43452996
Alignment:
Q  186 ttttctaatatattatttaagatatttaaactcaaaattatgtattgatatatgtaataaggtcaactgtgtc 258  Q
    ||||||||||||||||| |||||||||||||||||||||||| ||||||||  ||||||||||||||||||||    
T  43453068 ttttctaatatattattcaagatatttaaactcaaaattatgcattgatatgcgtaataaggtcaactgtgtc 43452996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 186 - 258
Target Start/End: Complemental strand, 8250746 - 8250674
Alignment:
Q  186 ttttctaatatattatttaagatatttaaactcaaaattatgtattgatatatgtaataaggtcaactgtgtc 258  Q
    ||||||||||||||||| |||||||||||||||||||||||| |||| |||| ||||| ||||||||||||||    
T  8250746 ttttctaatatattattcaagatatttaaactcaaaattatgcattggtatacgtaattaggtcaactgtgtc 8250674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 186 - 258
Target Start/End: Complemental strand, 33526065 - 33525994
Alignment:
Q  186 ttttctaatatattatttaagatatttaaactcaaaattatgtattgatatatgtaataaggtcaactgtgtc 258  Q
    ||||||||||||||||| || |||||||||||||||||||||||||| ||||| |||||||||||||||||||    
T  33526065 ttttctaatatattattcaa-atatttaaactcaaaattatgtattggtatatataataaggtcaactgtgtc 33525994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 186 - 258
Target Start/End: Complemental strand, 38786849 - 38786777
Alignment:
Q  186 ttttctaatatattatttaagatatttaaactcaaaattatgtattgatatatgtaataaggtcaactgtgtc 258  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||  |||||| |||||| ||||||    
T  38786849 ttttctaatatattattaaagatatttaaactcaaaattatgtattgatatgcgtaatagggtcaattgtgtc 38786777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 191 - 258
Target Start/End: Complemental strand, 26476907 - 26476840
Alignment:
Q  191 taatatattatttaagatatttaaactcaaaattatgtattgatatatgtaataaggtcaactgtgtc 258  Q
    |||||||||||| |||||||||||||||||||||||||||||| ||  ||||||||||||||||||||    
T  26476907 taatatattattcaagatatttaaactcaaaattatgtattgacatgcgtaataaggtcaactgtgtc 26476840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 186 - 258
Target Start/End: Complemental strand, 1821532 - 1821460
Alignment:
Q  186 ttttctaatatattatttaagatatttaaactcaaaattatgtattgatatatgtaataaggtcaactgtgtc 258  Q
    ||||||||||||||||| ||||||||||| |||||||||||| |||| |||| |||||  |||||||||||||    
T  1821532 ttttctaatatattattcaagatatttaagctcaaaattatgcattggtatacgtaattgggtcaactgtgtc 1821460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 186 - 258
Target Start/End: Original strand, 25815693 - 25815765
Alignment:
Q  186 ttttctaatatattatttaagatatttaaactcaaaattatgtattgatatatgtaataaggtcaactgtgtc 258  Q
    |||||||||||| |||| ||||||||||| |||||||||||| ||||| ||| |||||||| |||||||||||    
T  25815693 ttttctaatatactattcaagatatttaacctcaaaattatgcattgagatacgtaataagatcaactgtgtc 25815765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 186 - 258
Target Start/End: Complemental strand, 44963575 - 44963503
Alignment:
Q  186 ttttctaatatattatttaagatatttaaactcaaaattatgtattgatatatgtaataaggtcaactgtgtc 258  Q
    ||||||||||||||||| ||||||||||| |||||| ||||||||||| ||  ||||||||||||||| ||||    
T  44963575 ttttctaatatattattcaagatatttaagctcaaagttatgtattgacatgcgtaataaggtcaactatgtc 44963503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 197 - 258
Target Start/End: Complemental strand, 12685821 - 12685760
Alignment:
Q  197 attatttaagatatttaaactcaaaattatgtattgatatatgtaataaggtcaactgtgtc 258  Q
    |||||| ||||||||||| |||||||||||| ||||| || |||||||||||||||||||||    
T  12685821 attattcaagatatttaagctcaaaattatgcattgacatgtgtaataaggtcaactgtgtc 12685760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 186 - 258
Target Start/End: Complemental strand, 5117337 - 5117265
Alignment:
Q  186 ttttctaatatattatttaagatatttaaactcaaaattatgtattgatatatgtaataaggtcaactgtgtc 258  Q
    ||||||||||||||||| ||||||||||| |||||| ||||| ||||| ||  |||||||| |||||||||||    
T  5117337 ttttctaatatattattcaagatatttaagctcaaagttatgcattgacatgcgtaataagttcaactgtgtc 5117265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 186 - 258
Target Start/End: Complemental strand, 7075233 - 7075161
Alignment:
Q  186 ttttctaatatattatttaagatatttaaactcaaaattatgtattgatatatgtaataaggtcaactgtgtc 258  Q
    ||||| ||||||||||| |||||||||||||||||||||| | ||||||||  |||||  |||||||||||||    
T  7075233 ttttccaatatattattcaagatatttaaactcaaaattacgcattgatatgcgtaattgggtcaactgtgtc 7075161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 186 - 258
Target Start/End: Complemental strand, 10100416 - 10100344
Alignment:
Q  186 ttttctaatatattatttaagatatttaaactcaaaattatgtattgatatatgtaataaggtcaactgtgtc 258  Q
    ||||| ||||||||||| || ||||||||||||||||||| | ||||||||  ||||| ||||||||||||||    
T  10100416 ttttccaatatattattcaaaatatttaaactcaaaattacgcattgatatgcgtaattaggtcaactgtgtc 10100344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 186 - 258
Target Start/End: Original strand, 26544033 - 26544105
Alignment:
Q  186 ttttctaatatattatttaagatatttaaactcaaaattatgtattgatatatgtaataaggtcaactgtgtc 258  Q
    ||||| ||||||||||| |||||||||||||||||||||| | ||||||||  |||||  |||||||||||||    
T  26544033 ttttccaatatattattcaagatatttaaactcaaaattacgcattgatatgcgtaatcgggtcaactgtgtc 26544105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 186 - 258
Target Start/End: Complemental strand, 31651804 - 31651732
Alignment:
Q  186 ttttctaatatattatttaagatatttaaactcaaaattatgtattgatatatgtaataaggtcaactgtgtc 258  Q
    |||| |||||||||||| ||||||||||| |||||||||||| |||| |||  |||||| |||||||||||||    
T  31651804 ttttataatatattattcaagatatttaagctcaaaattatgcattggtatgcgtaatagggtcaactgtgtc 31651732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 186 - 258
Target Start/End: Complemental strand, 40058870 - 40058798
Alignment:
Q  186 ttttctaatatattatttaagatatttaaactcaaaattatgtattgatatatgtaataaggtcaactgtgtc 258  Q
    ||||||||||||||||| ||  |||||||||||||| ||||| ||||| ||  ||||||||||||||||||||    
T  40058870 ttttctaatatattattcaaagtatttaaactcaaagttatgcattgacatgcgtaataaggtcaactgtgtc 40058798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 192 - 255
Target Start/End: Original strand, 23337977 - 23338040
Alignment:
Q  192 aatatattatttaagatatttaaactcaaaattatgtattgatatatgtaataaggtcaactgt 255  Q
    ||||||||||| |||||||||||||||||||||||| ||||| ||  |||||| ||||||||||    
T  23337977 aatatattattcaagatatttaaactcaaaattatgcattgacatgcgtaatatggtcaactgt 23338040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 186 - 256
Target Start/End: Original strand, 47912446 - 47912516
Alignment:
Q  186 ttttctaatatattatttaagatatttaaactcaaaattatgtattgatatatgtaataaggtcaactgtg 256  Q
    |||| |||||||||||| || |||||||| |||||||||||| ||||| ||| ||||||||||||| ||||    
T  47912446 ttttataatatattattcaaaatatttaagctcaaaattatgcattgacatacgtaataaggtcaattgtg 47912516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 186 - 250
Target Start/End: Complemental strand, 2611976 - 2611912
Alignment:
Q  186 ttttctaatatattatttaagatatttaaactcaaaattatgtattgatatatgtaataaggtca 250  Q
    |||| ||||||||| || ||||||||||||||||||||||||||| |||||| || ||| |||||    
T  2611976 ttttttaatatatttttcaagatatttaaactcaaaattatgtatcgatatacgtgatagggtca 2611912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 186 - 258
Target Start/End: Complemental strand, 5606294 - 5606222
Alignment:
Q  186 ttttctaatatattatttaagatatttaaactcaaaattatgtattgatatatgtaataaggtcaactgtgtc 258  Q
    ||||| ||||||||||| |||||||||||||||||||||| | |||| |||  |||||  |||||||||||||    
T  5606294 ttttccaatatattattcaagatatttaaactcaaaattaagcattggtatgcgtaattgggtcaactgtgtc 5606222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 186 - 258
Target Start/End: Complemental strand, 10648101 - 10648030
Alignment:
Q  186 ttttctaatatattatttaagatatttaaactcaaaattatgtattgatatatgtaataaggtcaactgtgtc 258  Q
    |||| |||||||||||| |||||||||||||||||||||||  | | | ||| ||||||||||||||||||||    
T  10648101 ttttttaatatattattcaagatatttaaactcaaaattataca-taaaatacgtaataaggtcaactgtgtc 10648030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 186 - 258
Target Start/End: Original strand, 41414368 - 41414440
Alignment:
Q  186 ttttctaatatattatttaagatatttaaactcaaaattatgtattgatatatgtaataaggtcaactgtgtc 258  Q
    |||||||| |||||||| ||||||||||| |||||||||||| ||||| ||| |||||   ||||||||||||    
T  41414368 ttttctaacatattattcaagatatttaagctcaaaattatgcattgaaatacgtaattgagtcaactgtgtc 41414440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 186 - 258
Target Start/End: Original strand, 44741508 - 44741580
Alignment:
Q  186 ttttctaatatattatttaagatatttaaactcaaaattatgtattgatatatgtaataaggtcaactgtgtc 258  Q
    ||||| ||||||||||| |||||||||||||||||||||| | ||||||||  |||||  | |||||||||||    
T  44741508 ttttccaatatattattcaagatatttaaactcaaaattacgcattgatatgcgtaattggatcaactgtgtc 44741580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 186 - 258
Target Start/End: Original strand, 45299484 - 45299556
Alignment:
Q  186 ttttctaatatattatttaagatatttaaactcaaaattatgtattgatatatgtaataaggtcaactgtgtc 258  Q
    ||||| ||||||||||| |||||||||||||||||||||| | |||| |||  |||||  |||||||||||||    
T  45299484 ttttccaatatattattcaagatatttaaactcaaaattacgcattggtatgcgtaattgggtcaactgtgtc 45299556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 186 - 258
Target Start/End: Original strand, 52688696 - 52688768
Alignment:
Q  186 ttttctaatatattatttaagatatttaaactcaaaattatgtattgatatatgtaataaggtcaactgtgtc 258  Q
    ||||||||||||||||| || |||||||| |||||| ||||| ||||| || | |||||||||||| ||||||    
T  52688696 ttttctaatatattattcaatatatttaagctcaaagttatgcattgacatgtataataaggtcaattgtgtc 52688768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 186 - 253
Target Start/End: Original strand, 5945930 - 5945997
Alignment:
Q  186 ttttctaatatattatttaagatatttaaactcaaaattatgtattgatatatgtaataaggtcaact 253  Q
    ||||| ||||||||||| |||||||||||||||||||||| | |||| |||  ||||| |||||||||    
T  5945930 ttttccaatatattattcaagatatttaaactcaaaattacgcattggtatgcgtaattaggtcaact 5945997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 186 - 257
Target Start/End: Original strand, 48312193 - 48312264
Alignment:
Q  186 ttttctaatatattatttaagatatttaaactcaaaattatgtattgatatatgtaataaggtcaactgtgt 257  Q
    ||||||||||||||||| || |||||||| |||||||||||| ||||| ||   ||||||||| ||||||||    
T  48312193 ttttctaatatattattcaaaatatttaagctcaaaattatgcattgacatgcataataaggtaaactgtgt 48312264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 187 - 258
Target Start/End: Complemental strand, 52141955 - 52141884
Alignment:
Q  187 tttctaatatattatttaagatatttaaactcaaaattatgtattgatatatgtaataaggtcaactgtgtc 258  Q
    |||||||||||||||| ||||||||| ||||||||| |||| ||||  ||   |||||||||||||||||||    
T  52141955 tttctaatatattattcaagatatttcaactcaaaaatatgcattggcatgcataataaggtcaactgtgtc 52141884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 186 - 253
Target Start/End: Original strand, 52749446 - 52749513
Alignment:
Q  186 ttttctaatatattatttaagatatttaaactcaaaattatgtattgatatatgtaataaggtcaact 253  Q
    ||||| ||||||||||| |||||||||||||||||||||| | |||| ||| ||||||  ||||||||    
T  52749446 ttttccaatatattattcaagatatttaaactcaaaattacgcattggtatgtgtaattgggtcaact 52749513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 186 - 236
Target Start/End: Complemental strand, 33730100 - 33730050
Alignment:
Q  186 ttttctaatatattatttaagatatttaaactcaaaattatgtattgatat 236  Q
    |||| |||||||||||| |||||||||||||| ||||||||| ||||||||    
T  33730100 ttttttaatatattattcaagatatttaaacttaaaattatgcattgatat 33730050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 186 - 243
Target Start/End: Complemental strand, 50014464 - 50014407
Alignment:
Q  186 ttttctaatatattatttaagatatttaaactcaaaattatgtattgatatatgtaat 243  Q
    |||||||| |||||||| |||||||||||||||| ||||||| ||||  |||||||||    
T  50014464 ttttctaacatattattcaagatatttaaactcagaattatgcattggaatatgtaat 50014407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 186 - 258
Target Start/End: Original strand, 10124274 - 10124346
Alignment:
Q  186 ttttctaatatattatttaagatatttaaactcaaaattatgtattgatatatgtaataaggtcaactgtgtc 258  Q
    ||||| ||||||||||| || ||||||||||||||||||| | ||||||||  |||||   ||||||||||||    
T  10124274 ttttccaatatattattcaaaatatttaaactcaaaattacgcattgatatgcgtaattgagtcaactgtgtc 10124346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 186 - 258
Target Start/End: Original strand, 44452361 - 44452433
Alignment:
Q  186 ttttctaatatattatttaagatatttaaactcaaaattatgtattgatatatgtaataaggtcaactgtgtc 258  Q
    |||| |||||||||||  ||||||||||| |||||||||||| ||| | ||  ||||||||||||| ||||||    
T  44452361 ttttttaatatattatccaagatatttaagctcaaaattatgcattaacatgcgtaataaggtcaattgtgtc 44452433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 186 - 230
Target Start/End: Original strand, 48389232 - 48389276
Alignment:
Q  186 ttttctaatatattatttaagatatttaaactcaaaattatgtat 230  Q
    |||||||| |||||||| ||||||||||| |||||||||||||||    
T  48389232 ttttctaacatattattcaagatatttaagctcaaaattatgtat 48389276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 186 - 232
Target Start/End: Original strand, 4489226 - 4489272
Alignment:
Q  186 ttttctaatatattatttaagatatttaaactcaaaattatgtattg 232  Q
    |||||||| |||||||| ||||||||||| |||||||||||| ||||    
T  4489226 ttttctaacatattattcaagatatttaagctcaaaattatgcattg 4489272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 186 - 232
Target Start/End: Original strand, 23393397 - 23393443
Alignment:
Q  186 ttttctaatatattatttaagatatttaaactcaaaattatgtattg 232  Q
    |||||||| |||||||| ||||||||||| |||||||||||| ||||    
T  23393397 ttttctaacatattattcaagatatttaagctcaaaattatgcattg 23393443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 186 - 232
Target Start/End: Original strand, 28490325 - 28490371
Alignment:
Q  186 ttttctaatatattatttaagatatttaaactcaaaattatgtattg 232  Q
    |||||||| |||||||| ||||||||||| |||||||||||| ||||    
T  28490325 ttttctaacatattattcaagatatttaagctcaaaattatgcattg 28490371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 186 - 232
Target Start/End: Complemental strand, 31932082 - 31932036
Alignment:
Q  186 ttttctaatatattatttaagatatttaaactcaaaattatgtattg 232  Q
    |||| ||| |||||||| ||||||||||| |||||||||||||||||    
T  31932082 ttttttaacatattattcaagatatttaagctcaaaattatgtattg 31932036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 192 - 225
Target Start/End: Complemental strand, 2138926 - 2138893
Alignment:
Q  192 aatatattatttaagatatttaaactcaaaatta 225  Q
    ||||||||||| ||||||||||||||||||||||    
T  2138926 aatatattattcaagatatttaaactcaaaatta 2138893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 186 - 251
Target Start/End: Original strand, 31745906 - 31745971
Alignment:
Q  186 ttttctaatatattatttaagatatttaaactcaaaattatgtattgatatatgtaataaggtcaa 251  Q
    |||| |||||||||||| ||||||||||| || ||||||||| ||||| ||  ||||||| |||||    
T  31745906 ttttataatatattattcaagatatttaacctaaaaattatggattgacattcgtaataaagtcaa 31745971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 186 - 255
Target Start/End: Original strand, 40883575 - 40883644
Alignment:
Q  186 ttttctaatatattatttaagatatttaaactcaaaattatgtattgatatatgtaataaggtcaactgt 255  Q
    |||| |||||||||||| |||||||||||  ||||||||||| ||| ||||  |||||| | ||||||||    
T  40883575 ttttttaatatattattcaagatatttaagttcaaaattatgcattaatatgcgtaataggatcaactgt 40883644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 186 - 227
Target Start/End: Complemental strand, 49903589 - 49903548
Alignment:
Q  186 ttttctaatatattatttaagatatttaaactcaaaattatg 227  Q
    ||||||||||||||||| ||||||| ||| ||||||||||||    
T  49903589 ttttctaatatattattcaagatatgtaagctcaaaattatg 49903548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 186 - 258
Target Start/End: Original strand, 43452865 - 43452937
Alignment:
Q  186 ttttctaatatattatttaagatatttaaactcaaaattatgtattgatatatgtaataaggtcaactgtgtc 258  Q
    |||||||| | |||| | ||| |||||||| | |||||||||||||| ||| ||| | |||||||||||||||    
T  43452865 ttttctaaaagattagtgaagttatttaaaattaaaattatgtattggtatgtgtgacaaggtcaactgtgtc 43452937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 186 - 255
Target Start/End: Complemental strand, 48613986 - 48613915
Alignment:
Q  186 ttttctaatatatt--atttaagatatttaaactcaaaattatgtattgatatatgtaataaggtcaactgt 255  Q
    ||||||||||||||  ||| ||||||||||| |||||||||||  ||||| ||  |||||||||| ||||||    
T  48613986 ttttctaatatattttattcaagatatttaagctcaaaattatacattgacatgcgtaataaggttaactgt 48613915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 56; Significance: 3e-23; HSPs: 49)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 187 - 258
Target Start/End: Original strand, 43398992 - 43399063
Alignment:
Q  187 tttctaatatattatttaagatatttaaactcaaaattatgtattgatatatgtaataaggtcaactgtgtc 258  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||  |||||| | |||||||||||    
T  43398992 tttctaatatattatttaagatatttaaactcaaaattatgtattgatatgcgtaataggatcaactgtgtc 43399063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 186 - 255
Target Start/End: Complemental strand, 1334192 - 1334123
Alignment:
Q  186 ttttctaatatattatttaagatatttaaactcaaaattatgtattgatatatgtaataaggtcaactgt 255  Q
    ||||||||||||||||||||||||||||| |||||||||||| ||||| || ||||||||||||||||||    
T  1334192 ttttctaatatattatttaagatatttaagctcaaaattatgcattgacatgtgtaataaggtcaactgt 1334123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 186 - 258
Target Start/End: Complemental strand, 36594312 - 36594240
Alignment:
Q  186 ttttctaatatattatttaagatatttaaactcaaaattatgtattgatatatgtaataaggtcaactgtgtc 258  Q
    ||||||||||||||||| ||||||||||| |||||||||||| ||||| ||  ||||||||||||||||||||    
T  36594312 ttttctaatatattattcaagatatttaagctcaaaattatgcattgacatgcgtaataaggtcaactgtgtc 36594240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 186 - 258
Target Start/End: Complemental strand, 44821428 - 44821356
Alignment:
Q  186 ttttctaatatattatttaagatatttaaactcaaaattatgtattgatatatgtaataaggtcaactgtgtc 258  Q
    ||||||||||||||||| ||||||||||| |||||| ||||| ||||| ||||||||||||||||| ||||||    
T  44821428 ttttctaatatattattcaagatatttaagctcaaagttatgcattgacatatgtaataaggtcaattgtgtc 44821356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 186 - 258
Target Start/End: Complemental strand, 10228623 - 10228551
Alignment:
Q  186 ttttctaatatattatttaagatatttaaactcaaaattatgtattgatatatgtaataaggtcaactgtgtc 258  Q
    ||||||||||||||||| |||||||||||  ||||| ||||| ||||| ||  ||||||||||||||||||||    
T  10228623 ttttctaatatattattcaagatatttaagttcaaagttatgcattgacatgcgtaataaggtcaactgtgtc 10228551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 186 - 258
Target Start/End: Complemental strand, 16434751 - 16434679
Alignment:
Q  186 ttttctaatatattatttaagatatttaaactcaaaattatgtattgatatatgtaataaggtcaactgtgtc 258  Q
    ||||| ||||||||||| |||||||||||||||||||||| | |||| |||| |||||  |||||||||||||    
T  16434751 ttttccaatatattattcaagatatttaaactcaaaattacgcattggtatacgtaattgggtcaactgtgtc 16434679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 186 - 258
Target Start/End: Complemental strand, 29793272 - 29793200
Alignment:
Q  186 ttttctaatatattatttaagatatttaaactcaaaattatgtattgatatatgtaataaggtcaactgtgtc 258  Q
    ||||| |||||||||||||||||||||||||||||||||||| |||| |||  |||||  ||| |||||||||    
T  29793272 ttttccaatatattatttaagatatttaaactcaaaattatgcattggtatgcgtaattgggttaactgtgtc 29793200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 186 - 258
Target Start/End: Complemental strand, 36179030 - 36178958
Alignment:
Q  186 ttttctaatatattatttaagatatttaaactcaaaattatgtattgatatatgtaataaggtcaactgtgtc 258  Q
    ||||||||||||||||| |||||||||||||||||||||| | ||| ||||| |||||  | |||||||||||    
T  36179030 ttttctaatatattattcaagatatttaaactcaaaattacgcattaatatacgtaattggatcaactgtgtc 36178958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 192 - 258
Target Start/End: Complemental strand, 29444941 - 29444875
Alignment:
Q  192 aatatattatttaagatatttaaactcaaaattatgtattgatatatgtaataaggtcaactgtgtc 258  Q
    ||||||||||| |||||||||||| ||||||||| | |||| ||||||||||  |||||||||||||    
T  29444941 aatatattattcaagatatttaaattcaaaattacgcattggtatatgtaatttggtcaactgtgtc 29444875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 186 - 260
Target Start/End: Original strand, 32961411 - 32961485
Alignment:
Q  186 ttttctaatatattatttaagatatttaaactcaaaattatgtattgatatatgtaataaggtcaactgtgtcgt 260  Q
    |||||||| |||||||| || ||||||||||||||||||||| ||||| ||  |||||| |||||||||| ||||    
T  32961411 ttttctaacatattattcaaaatatttaaactcaaaattatgcattgacatgcgtaatagggtcaactgtatcgt 32961485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 186 - 243
Target Start/End: Complemental strand, 38878372 - 38878315
Alignment:
Q  186 ttttctaatatattatttaagatatttaaactcaaaattatgtattgatatatgtaat 243  Q
    ||||| ||||||||||| |||||||||||||||||||||| | ||||||||| |||||    
T  38878372 ttttccaatatattattcaagatatttaaactcaaaattacgcattgatatacgtaat 38878315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 186 - 258
Target Start/End: Complemental strand, 900982 - 900910
Alignment:
Q  186 ttttctaatatattatttaagatatttaaactcaaaattatgtattgatatatgtaataaggtcaactgtgtc 258  Q
    ||||| ||||||||||| |||||||||||||||||||||| | |||| |||  |||||  |||||||||||||    
T  900982 ttttccaatatattattcaagatatttaaactcaaaattacgcattggtatgcgtaatttggtcaactgtgtc 900910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 186 - 258
Target Start/End: Original strand, 1778526 - 1778598
Alignment:
Q  186 ttttctaatatattatttaagatatttaaactcaaaattatgtattgatatatgtaataaggtcaactgtgtc 258  Q
    |||||||| |||||||||||||||||||| |||||||||||| ||||  ||| |||||   ||||||||||||    
T  1778526 ttttctaacatattatttaagatatttaagctcaaaattatgcattggaatacgtaatggagtcaactgtgtc 1778598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 186 - 258
Target Start/End: Original strand, 3817888 - 3817960
Alignment:
Q  186 ttttctaatatattatttaagatatttaaactcaaaattatgtattgatatatgtaataaggtcaactgtgtc 258  Q
    |||||||||||| |||| |||||||||||||||||||||||| ||||  ||  |||| | |||||||||||||    
T  3817888 ttttctaatatactattcaagatatttaaactcaaaattatgcattgtcatgcgtaacacggtcaactgtgtc 3817960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 190 - 258
Target Start/End: Complemental strand, 9997770 - 9997702
Alignment:
Q  190 ctaatatattatttaagatatttaaactcaaaattatgtattgatatatgtaataaggtcaactgtgtc 258  Q
    ||||||||||||| |||||||||||  ||||| ||||| ||||| ||  ||||||||||||||||||||    
T  9997770 ctaatatattattcaagatatttaagttcaaagttatgcattgacatgcgtaataaggtcaactgtgtc 9997702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 186 - 258
Target Start/End: Original strand, 12948205 - 12948277
Alignment:
Q  186 ttttctaatatattatttaagatatttaaactcaaaattatgtattgatatatgtaataaggtcaactgtgtc 258  Q
    ||||| ||||||||||| |||||||||||||||||||||||| |||| |||  |||||  | |||||||||||    
T  12948205 ttttccaatatattattcaagatatttaaactcaaaattatgcattggtatgcgtaattggatcaactgtgtc 12948277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 186 - 258
Target Start/End: Original strand, 26759643 - 26759715
Alignment:
Q  186 ttttctaatatattatttaagatatttaaactcaaaattatgtattgatatatgtaataaggtcaactgtgtc 258  Q
    |||||||| |||||||| ||||||||||||||||||||||| |||||| ||   |||||  ||||||||||||    
T  26759643 ttttctaacatattattcaagatatttaaactcaaaattatatattgaaatgcataatagagtcaactgtgtc 26759715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 186 - 258
Target Start/End: Original strand, 29720560 - 29720632
Alignment:
Q  186 ttttctaatatattatttaagatatttaaactcaaaattatgtattgatatatgtaataaggtcaactgtgtc 258  Q
    ||||| ||||||||||| |||||||||||||||||||||| | |||| |||  |||||  |||||||||||||    
T  29720560 ttttccaatatattattcaagatatttaaactcaaaattacgcattggtatgcgtaattgggtcaactgtgtc 29720632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 186 - 258
Target Start/End: Complemental strand, 42098521 - 42098449
Alignment:
Q  186 ttttctaatatattatttaagatatttaaactcaaaattatgtattgatatatgtaataaggtcaactgtgtc 258  Q
    ||||| ||||||||||| |||||||||||||||||||||| | |||| |||  |||||  |||||||||||||    
T  42098521 ttttccaatatattattcaagatatttaaactcaaaattacgcattggtatgcgtaattgggtcaactgtgtc 42098449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 186 - 258
Target Start/End: Complemental strand, 47339978 - 47339906
Alignment:
Q  186 ttttctaatatattatttaagatatttaaactcaaaattatgtattgatatatgtaataaggtcaactgtgtc 258  Q
    |||||||||||| |||| |||||||||||||||||||||||| ||||  ||  |||| | |||||||||||||    
T  47339978 ttttctaatatactattcaagatatttaaactcaaaattatgcattgtcatgcgtaacacggtcaactgtgtc 47339906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 191 - 258
Target Start/End: Original strand, 53019998 - 53020065
Alignment:
Q  191 taatatattatttaagatatttaaactcaaaattatgtattgatatatgtaataaggtcaactgtgtc 258  Q
    |||||||||||| ||||||||||  |||||| ||||| ||||| ||  ||||||||||||||||||||    
T  53019998 taatatattattcaagatatttagtctcaaagttatgcattgacatgcgtaataaggtcaactgtgtc 53020065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 186 - 232
Target Start/End: Complemental strand, 4229082 - 4229036
Alignment:
Q  186 ttttctaatatattatttaagatatttaaactcaaaattatgtattg 232  Q
    |||||||| |||||||| |||||||||||||||||||||||| ||||    
T  4229082 ttttctaacatattattcaagatatttaaactcaaaattatgcattg 4229036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 184 - 258
Target Start/End: Original strand, 50673840 - 50673914
Alignment:
Q  184 tcttttctaatatattatttaagatatttaaactcaaaattatgtattgatatatgtaataaggtcaactgtgtc 258  Q
    ||||||| ||||||||||| |||||||||||||||||||||| | |||| |||  |||||  | |||||||||||    
T  50673840 tcttttccaatatattattcaagatatttaaactcaaaattacgcattggtatgcgtaattggatcaactgtgtc 50673914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 186 - 227
Target Start/End: Complemental strand, 28958893 - 28958852
Alignment:
Q  186 ttttctaatatattatttaagatatttaaactcaaaattatg 227  Q
    |||||||| |||||||| ||||||||||||||||||||||||    
T  28958893 ttttctaacatattattcaagatatttaaactcaaaattatg 28958852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 190 - 258
Target Start/End: Complemental strand, 10106274 - 10106206
Alignment:
Q  190 ctaatatattatttaagatatttaaactcaaaattatgtattgatatatgtaataaggtcaactgtgtc 258  Q
    ||||||||||||| |||||||||||  ||||| ||||| ||||| ||  ||||||| ||||||||||||    
T  10106274 ctaatatattattcaagatatttaagttcaaagttatgcattgacatgcgtaataaagtcaactgtgtc 10106206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 190 - 258
Target Start/End: Complemental strand, 10232375 - 10232307
Alignment:
Q  190 ctaatatattatttaagatatttaaactcaaaattatgtattgatatatgtaataaggtcaactgtgtc 258  Q
    ||||||||||||| |||||||||||  ||||| ||||| ||||| ||  ||||||| ||||||||||||    
T  10232375 ctaatatattattcaagatatttaagttcaaagttatgcattgacatgcgtaataaagtcaactgtgtc 10232307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 186 - 258
Target Start/End: Original strand, 34669773 - 34669845
Alignment:
Q  186 ttttctaatatattatttaagatatttaaactcaaaattatgtattgatatatgtaataaggtcaactgtgtc 258  Q
    ||||| ||||| ||||| |||||||||||||||||||||| | |||||||| | ||||  | |||||||||||    
T  34669773 ttttccaatatgttattcaagatatttaaactcaaaattacgcattgatatgtataattggatcaactgtgtc 34669845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 186 - 226
Target Start/End: Complemental strand, 43394453 - 43394413
Alignment:
Q  186 ttttctaatatattatttaagatatttaaactcaaaattat 226  Q
    ||||||||||||||||| ||||||||||| |||||||||||    
T  43394453 ttttctaatatattattcaagatatttaagctcaaaattat 43394413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 186 - 233
Target Start/End: Original strand, 4465046 - 4465093
Alignment:
Q  186 ttttctaatatattatttaagatatttaaactcaaaattatgtattga 233  Q
    |||||||| |||||||| ||||||||||| |||||||||||| |||||    
T  4465046 ttttctaacatattattcaagatatttaagctcaaaattatgcattga 4465093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 186 - 225
Target Start/End: Original strand, 9484761 - 9484800
Alignment:
Q  186 ttttctaatatattatttaagatatttaaactcaaaatta 225  Q
    ||||| ||||||||||| ||||||||||||||||||||||    
T  9484761 ttttccaatatattattcaagatatttaaactcaaaatta 9484800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 186 - 225
Target Start/End: Original strand, 12250468 - 12250507
Alignment:
Q  186 ttttctaatatattatttaagatatttaaactcaaaatta 225  Q
    ||||| ||||||||||| ||||||||||||||||||||||    
T  12250468 ttttccaatatattattcaagatatttaaactcaaaatta 12250507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 191 - 258
Target Start/End: Original strand, 29588545 - 29588612
Alignment:
Q  191 taatatattatttaagatatttaaactcaaaattatgtattgatatatgtaataaggtcaactgtgtc 258  Q
    |||||||||||| ||||||||||| |||||||||||| |||  ||||  |||||  ||||||||||||    
T  29588545 taatatattattcaagatatttaagctcaaaattatgcattagtatacataatagagtcaactgtgtc 29588612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 186 - 225
Target Start/End: Complemental strand, 34263598 - 34263559
Alignment:
Q  186 ttttctaatatattatttaagatatttaaactcaaaatta 225  Q
    ||||| ||||||||||| ||||||||||||||||||||||    
T  34263598 ttttccaatatattattcaagatatttaaactcaaaatta 34263559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 186 - 225
Target Start/End: Original strand, 34555316 - 34555355
Alignment:
Q  186 ttttctaatatattatttaagatatttaaactcaaaatta 225  Q
    ||||| ||||||||||| ||||||||||||||||||||||    
T  34555316 ttttccaatatattattcaagatatttaaactcaaaatta 34555355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 186 - 225
Target Start/End: Complemental strand, 48927696 - 48927657
Alignment:
Q  186 ttttctaatatattatttaagatatttaaactcaaaatta 225  Q
    ||||| ||||||||||| ||||||||||||||||||||||    
T  48927696 ttttccaatatattattcaagatatttaaactcaaaatta 48927657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 186 - 225
Target Start/End: Complemental strand, 49076320 - 49076281
Alignment:
Q  186 ttttctaatatattatttaagatatttaaactcaaaatta 225  Q
    ||||| ||||||||||| ||||||||||||||||||||||    
T  49076320 ttttccaatatattattcaagatatttaaactcaaaatta 49076281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 186 - 233
Target Start/End: Original strand, 49818922 - 49818969
Alignment:
Q  186 ttttctaatatattatttaagatatttaaactcaaaattatgtattga 233  Q
    |||||||| |||||||| ||||||||||| |||||||||||| |||||    
T  49818922 ttttctaacatattattcaagatatttaagctcaaaattatgcattga 49818969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 186 - 225
Target Start/End: Complemental strand, 53274889 - 53274850
Alignment:
Q  186 ttttctaatatattatttaagatatttaaactcaaaatta 225  Q
    ||||| ||||||||||| ||||||||||||||||||||||    
T  53274889 ttttccaatatattattcaagatatttaaactcaaaatta 53274850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 186 - 232
Target Start/End: Complemental strand, 4945745 - 4945699
Alignment:
Q  186 ttttctaatatattatttaagatatttaaactcaaaattatgtattg 232  Q
    |||||||| |||||||| ||||||||||| |||||||||||| ||||    
T  4945745 ttttctaacatattattcaagatatttaagctcaaaattatgcattg 4945699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 192 - 258
Target Start/End: Complemental strand, 29455596 - 29455530
Alignment:
Q  192 aatatattatttaagatatttaaactcaaaattatgtattgatatatgtaataaggtcaactgtgtc 258  Q
    ||||||||||| |||||||||||||||||||||| | |||| |||  ||||   |||||||||||||    
T  29455596 aatatattattcaagatatttaaactcaaaattacgcattggtatgcgtaaatgggtcaactgtgtc 29455530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 186 - 232
Target Start/End: Original strand, 33462870 - 33462916
Alignment:
Q  186 ttttctaatatattatttaagatatttaaactcaaaattatgtattg 232  Q
    |||||| |||||||||| ||||||||||| |||||||||||| ||||    
T  33462870 ttttcttatatattattcaagatatttaagctcaaaattatgcattg 33462916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 192 - 242
Target Start/End: Complemental strand, 38833601 - 38833551
Alignment:
Q  192 aatatattatttaagatatttaaactcaaaattatgtattgatatatgtaa 242  Q
    ||||||||||| |||||||||||||||||||||| | ||| |||| |||||    
T  38833601 aatatattattcaagatatttaaactcaaaattacgcattaatatgtgtaa 38833551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 195 - 257
Target Start/End: Original strand, 43170148 - 43170210
Alignment:
Q  195 atattatttaagatatttaaactcaaaattatgtattgatatatgtaataaggtcaactgtgt 257  Q
    |||||||| ||||||| |||||||||||||||| |||| |||| ||||||  ||||| |||||    
T  43170148 atattattcaagatatctaaactcaaaattatgcattggtatacgtaatagagtcaattgtgt 43170210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 192 - 225
Target Start/End: Complemental strand, 14750948 - 14750915
Alignment:
Q  192 aatatattatttaagatatttaaactcaaaatta 225  Q
    ||||||||||| ||||||||||||||||||||||    
T  14750948 aatatattattcaagatatttaaactcaaaatta 14750915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 186 - 227
Target Start/End: Complemental strand, 18013364 - 18013323
Alignment:
Q  186 ttttctaatatattatttaagatatttaaactcaaaattatg 227  Q
    ||||||||||||||||| ||||||||||| ||| ||||||||    
T  18013364 ttttctaatatattattcaagatatttaagctctaaattatg 18013323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 188 - 233
Target Start/End: Complemental strand, 31440524 - 31440479
Alignment:
Q  188 ttctaatatattatttaagatatttaaactcaaaattatgtattga 233  Q
    ||||||||||||||| ||||||||||| ||| |||||||| |||||    
T  31440524 ttctaatatattattcaagatatttaagctctaaattatgcattga 31440479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 186 - 258
Target Start/End: Original strand, 34680347 - 34680419
Alignment:
Q  186 ttttctaatatattatttaagatatttaaactcaaaattatgtattgatatatgtaataaggtcaactgtgtc 258  Q
    |||||||| || ||||| ||||||||||| |||||||||||  ||||  ||| ||||||  ||||||||||||    
T  34680347 ttttctaacattttattcaagatatttaagctcaaaattatacattggaatacgtaatagagtcaactgtgtc 34680419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 186 - 226
Target Start/End: Complemental strand, 36364657 - 36364617
Alignment:
Q  186 ttttctaatatattatttaagatatttaaactcaaaattat 226  Q
    |||||||| |||||||| ||||||||||| |||||||||||    
T  36364657 ttttctaacatattattcaagatatttaagctcaaaattat 36364617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 186 - 226
Target Start/End: Complemental strand, 39557479 - 39557439
Alignment:
Q  186 ttttctaatatattatttaagatatttaaactcaaaattat 226  Q
    |||| |||||||||||| |||||||||||| ||||||||||    
T  39557479 ttttttaatatattattaaagatatttaaaatcaaaattat 39557439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 50; Significance: 1e-19; HSPs: 46)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 186 - 255
Target Start/End: Complemental strand, 8496782 - 8496713
Alignment:
Q  186 ttttctaatatattatttaagatatttaaactcaaaattatgtattgatatatgtaataaggtcaactgt 255  Q
    ||||||||||||||||| ||||||||||| |||||||||||| ||||||||| |||||| ||||||||||    
T  8496782 ttttctaatatattattcaagatatttaagctcaaaattatgcattgatatacgtaatagggtcaactgt 8496713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 186 - 258
Target Start/End: Original strand, 44039990 - 44040062
Alignment:
Q  186 ttttctaatatattatttaagatatttaaactcaaaattatgtattgatatatgtaataaggtcaactgtgtc 258  Q
    |||| |||||||||||| |||||||||||||||||||||||| |||| |||  |||||| |||||||||||||    
T  44039990 ttttataatatattattcaagatatttaaactcaaaattatgcattggtatgcgtaatagggtcaactgtgtc 44040062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 186 - 258
Target Start/End: Complemental strand, 21132824 - 21132752
Alignment:
Q  186 ttttctaatatattatttaagatatttaaactcaaaattatgtattgatatatgtaataaggtcaactgtgtc 258  Q
    ||||| ||||||||||| |||||||||||||||||||||||| |||| |||  |||||  |||||||||||||    
T  21132824 ttttccaatatattattcaagatatttaaactcaaaattatgcattggtatgcgtaattgggtcaactgtgtc 21132752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 186 - 258
Target Start/End: Original strand, 30653526 - 30653598
Alignment:
Q  186 ttttctaatatattatttaagatatttaaactcaaaattatgtattgatatatgtaataaggtcaactgtgtc 258  Q
    ||||||||||||||||||||||||||||| || ||||||||| ||||| ||   |||||||||||||| ||||    
T  30653526 ttttctaatatattatttaagatatttaatctgaaaattatgcattgacatgcttaataaggtcaactatgtc 30653598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 190 - 258
Target Start/End: Complemental strand, 38036750 - 38036682
Alignment:
Q  190 ctaatatattatttaagatatttaaactcaaaattatgtattgatatatgtaataaggtcaactgtgtc 258  Q
    ||||||||||||| ||||||||||| |||||| ||||| ||||| ||  ||||||||||||||||||||    
T  38036750 ctaatatattattcaagatatttaagctcaaagttatgcattgacatgcgtaataaggtcaactgtgtc 38036682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 188 - 258
Target Start/End: Original strand, 3466453 - 3466523
Alignment:
Q  188 ttctaatatattatttaagatatttaaactcaaaattatgtattgatatatgtaataaggtcaactgtgtc 258  Q
    ||||||||||||||| ||||||||||| |||||| ||||| ||||| |||  |||||||| ||||||||||    
T  3466453 ttctaatatattattcaagatatttaagctcaaagttatgcattgacatacataataaggccaactgtgtc 3466523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 186 - 251
Target Start/End: Original strand, 27302027 - 27302092
Alignment:
Q  186 ttttctaatatattatttaagatatttaaactcaaaattatgtattgatatatgtaataaggtcaa 251  Q
    |||| |||||||||||| |||||||||||||||||||||||| ||||| ||  |||||| ||||||    
T  27302027 ttttataatatattattcaagatatttaaactcaaaattatgcattgacatgcgtaatagggtcaa 27302092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 186 - 258
Target Start/End: Original strand, 761715 - 761787
Alignment:
Q  186 ttttctaatatattatttaagatatttaaactcaaaattatgtattgatatatgtaataaggtcaactgtgtc 258  Q
    ||||| ||||||||||| |||||||||||||||||||||| | |||| |||  |||||  |||||||||||||    
T  761715 ttttccaatatattattcaagatatttaaactcaaaattacgcattggtatgcgtaattgggtcaactgtgtc 761787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 186 - 226
Target Start/End: Original strand, 2026737 - 2026777
Alignment:
Q  186 ttttctaatatattatttaagatatttaaactcaaaattat 226  Q
    |||||||||||||||||||||||||||||||| ||||||||    
T  2026737 ttttctaatatattatttaagatatttaaacttaaaattat 2026777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 186 - 230
Target Start/End: Complemental strand, 5777450 - 5777406
Alignment:
Q  186 ttttctaatatattatttaagatatttaaactcaaaattatgtat 230  Q
    ||||||||||||||||| |||||||||||||||||||||| ||||    
T  5777450 ttttctaatatattattcaagatatttaaactcaaaattacgtat 5777406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 186 - 258
Target Start/End: Complemental strand, 14378583 - 14378511
Alignment:
Q  186 ttttctaatatattatttaagatatttaaactcaaaattatgtattgatatatgtaataaggtcaactgtgtc 258  Q
    ||||| ||||||||||| |||||||||||||||||||||| | |||| |||  |||||  |||||||||||||    
T  14378583 ttttccaatatattattcaagatatttaaactcaaaattacgcattggtatgcgtaattgggtcaactgtgtc 14378511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 186 - 258
Target Start/End: Original strand, 23547233 - 23547305
Alignment:
Q  186 ttttctaatatattatttaagatatttaaactcaaaattatgtattgatatatgtaataaggtcaactgtgtc 258  Q
    ||||| ||||||||||| |||||||||||||||||||||| | |||| |||  ||||| | ||||||||||||    
T  23547233 ttttccaatatattattcaagatatttaaactcaaaattacgcattggtatgcgtaattaagtcaactgtgtc 23547305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 186 - 258
Target Start/End: Complemental strand, 29616222 - 29616150
Alignment:
Q  186 ttttctaatatattatttaagatatttaaactcaaaattatgtattgatatatgtaataaggtcaactgtgtc 258  Q
    ||||||||||||||||| ||||||||||| |||||||||||| || | |||  |||||| | |||||||||||    
T  29616222 ttttctaatatattattcaagatatttaagctcaaaattatgcatcggtatgcgtaataggatcaactgtgtc 29616150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 186 - 242
Target Start/End: Complemental strand, 36632090 - 36632034
Alignment:
Q  186 ttttctaatatattatttaagatatttaaactcaaaattatgtattgatatatgtaa 242  Q
    |||| |||||||||||| |||||||||| ||||||||||||||||||| || |||||    
T  36632090 ttttttaatatattattcaagatatttacactcaaaattatgtattgacatgtgtaa 36632034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 186 - 258
Target Start/End: Original strand, 37094297 - 37094369
Alignment:
Q  186 ttttctaatatattatttaagatatttaaactcaaaattatgtattgatatatgtaataaggtcaactgtgtc 258  Q
    |||||||| |||||||| ||||||||||| |||||||||||| ||||| ||| |||||   ||||||||||||    
T  37094297 ttttctaacatattattcaagatatttaagctcaaaattatgcattgaaatacgtaatggagtcaactgtgtc 37094369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 186 - 254
Target Start/End: Original strand, 44871496 - 44871564
Alignment:
Q  186 ttttctaatatattatttaagatatttaaactcaaaattatgtattgatatatgtaataaggtcaactg 254  Q
    |||||||| |||||||| || ||||||||||||||||||||| ||||| || | ||||| |||||||||    
T  44871496 ttttctaacatattattcaaaatatttaaactcaaaattatgcattgacatgtataatagggtcaactg 44871564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 186 - 258
Target Start/End: Complemental strand, 44887611 - 44887539
Alignment:
Q  186 ttttctaatatattatttaagatatttaaactcaaaattatgtattgatatatgtaataaggtcaactgtgtc 258  Q
    |||| |||||||||||| ||||||||||  |||||||||||| |||| |||  |||||| |||||||||||||    
T  44887611 ttttataatatattattcaagatatttatgctcaaaattatgcattggtatgcgtaatagggtcaactgtgtc 44887539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 191 - 258
Target Start/End: Original strand, 17523973 - 17524040
Alignment:
Q  191 taatatattatttaagatatttaaactcaaaattatgtattgatatatgtaataaggtcaactgtgtc 258  Q
    |||||||||||| ||||||||||| |||||||||||| ||||| ||  |||||||| |||| ||||||    
T  17523973 taatatattattcaagatatttaagctcaaaattatgcattgacatgcgtaataagatcaattgtgtc 17524040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 186 - 257
Target Start/End: Original strand, 40645847 - 40645918
Alignment:
Q  186 ttttctaatatattatttaagatatttaaactcaaaattatgtattgatatatgtaataaggtcaactgtgt 257  Q
    ||||||||||||||||| ||||||||||| ||| || ||||| ||||| ||  ||||||||||||| |||||    
T  40645847 ttttctaatatattattcaagatatttaagctcgaagttatgcattgacatgcgtaataaggtcaattgtgt 40645918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 186 - 232
Target Start/End: Original strand, 4960316 - 4960362
Alignment:
Q  186 ttttctaatatattatttaagatatttaaactcaaaattatgtattg 232  Q
    |||||||| |||||||| ||||||||||| |||||||||||||||||    
T  4960316 ttttctaacatattattcaagatatttaagctcaaaattatgtattg 4960362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 192 - 258
Target Start/End: Original strand, 30464603 - 30464669
Alignment:
Q  192 aatatattatttaagatatttaaactcaaaattatgtattgatatatgtaataaggtcaactgtgtc 258  Q
    ||||||||||| ||||||||||||||||||||||   ||||||||  |||||  |||||||||||||    
T  30464603 aatatattattcaagatatttaaactcaaaattacacattgatatgcgtaatttggtcaactgtgtc 30464669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 193 - 258
Target Start/End: Original strand, 67267 - 67332
Alignment:
Q  193 atatattatttaagatatttaaactcaaaattatgtattgatatatgtaataaggtcaactgtgtc 258  Q
    |||||||||| ||||||||||| |||||| ||||| ||||| ||  ||||||||||||||| ||||    
T  67267 atatattattcaagatatttaagctcaaagttatgcattgacatgcgtaataaggtcaactatgtc 67332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 186 - 227
Target Start/End: Complemental strand, 44020945 - 44020904
Alignment:
Q  186 ttttctaatatattatttaagatatttaaactcaaaattatg 227  Q
    ||||||||||||||||| |||||||||||||||||| |||||    
T  44020945 ttttctaatatattattcaagatatttaaactcaaagttatg 44020904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 186 - 255
Target Start/End: Original strand, 44717460 - 44717529
Alignment:
Q  186 ttttctaatatattatttaagatatttaaactcaaaattatgtattgatatatgtaataaggtcaactgt 255  Q
    |||| |||||||||||| | ||||||||| |||||||||||| ||||| ||  |||||||| ||||||||    
T  44717460 ttttataatatattattcatgatatttaagctcaaaattatgaattgacatgcgtaataagatcaactgt 44717529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 186 - 250
Target Start/End: Complemental strand, 1645302 - 1645238
Alignment:
Q  186 ttttctaatatattatttaagatatttaaactcaaaattatgtattgatatatgtaataaggtca 250  Q
    |||||||||| |||||| ||||||||||| |||||| ||||| ||||| ||  ||||||||||||    
T  1645302 ttttctaatacattattcaagatatttaagctcaaacttatgcattgacatgcgtaataaggtca 1645238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 186 - 258
Target Start/End: Complemental strand, 4327015 - 4326943
Alignment:
Q  186 ttttctaatatattatttaagatatttaaactcaaaattatgtattgatatatgtaataaggtcaactgtgtc 258  Q
    ||||| ||||||||||| || |||||||||||||||||||   ||||||||  |||||  |||||||||||||    
T  4327015 ttttccaatatattattcaaaatatttaaactcaaaattacacattgatatgcgtaattgggtcaactgtgtc 4326943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 186 - 258
Target Start/End: Original strand, 14512005 - 14512077
Alignment:
Q  186 ttttctaatatattatttaagatatttaaactcaaaattatgtattgatatatgtaataaggtcaactgtgtc 258  Q
    ||||||||||||||||| ||||||||||| |||||| ||||| ||||| ||   ||||||| |||| ||||||    
T  14512005 ttttctaatatattattcaagatatttaagctcaaagttatgcattgacatgcataataagatcaattgtgtc 14512077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 186 - 258
Target Start/End: Original strand, 20671421 - 20671493
Alignment:
Q  186 ttttctaatatattatttaagatatttaaactcaaaattatgtattgatatatgtaataaggtcaactgtgtc 258  Q
    ||||||||||||| ||| || |||||||| |||||||  ||| ||||| ||  ||||||||||||||||||||    
T  20671421 ttttctaatatataattcaaaatatttaagctcaaaaccatgcattgacatgcgtaataaggtcaactgtgtc 20671493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 186 - 258
Target Start/End: Complemental strand, 43049165 - 43049093
Alignment:
Q  186 ttttctaatatattatttaagatatttaaactcaaaattatgtattgatatatgtaataaggtcaactgtgtc 258  Q
    |||||||| |||||||| ||||||||||| |||||||||||| ||||| ||  |||||   ||||||||||||    
T  43049165 ttttctaacatattattcaagatatttaagctcaaaattatgcattgaaatgcgtaatggagtcaactgtgtc 43049093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 186 - 225
Target Start/End: Original strand, 15870340 - 15870379
Alignment:
Q  186 ttttctaatatattatttaagatatttaaactcaaaatta 225  Q
    ||||| ||||||||||| ||||||||||||||||||||||    
T  15870340 ttttccaatatattattcaagatatttaaactcaaaatta 15870379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 186 - 225
Target Start/End: Complemental strand, 23437709 - 23437670
Alignment:
Q  186 ttttctaatatattatttaagatatttaaactcaaaatta 225  Q
    ||||| ||||||||||| ||||||||||||||||||||||    
T  23437709 ttttccaatatattattcaagatatttaaactcaaaatta 23437670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 186 - 225
Target Start/End: Original strand, 25009309 - 25009348
Alignment:
Q  186 ttttctaatatattatttaagatatttaaactcaaaatta 225  Q
    ||||| ||||||||||| ||||||||||||||||||||||    
T  25009309 ttttccaatatattattcaagatatttaaactcaaaatta 25009348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 186 - 225
Target Start/End: Original strand, 29708726 - 29708765
Alignment:
Q  186 ttttctaatatattatttaagatatttaaactcaaaatta 225  Q
    ||||| ||||||||||| ||||||||||||||||||||||    
T  29708726 ttttccaatatattattcaagatatttaaactcaaaatta 29708765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 192 - 255
Target Start/End: Original strand, 38842334 - 38842397
Alignment:
Q  192 aatatattatttaagatatttaaactcaaaattatgtattgatatatgtaataaggtcaactgt 255  Q
    ||||||||||| |||||||||||||||||||||| | |||| |||  |||||  ||||||||||    
T  38842334 aatatattattcaagatatttaaactcaaaattacgcattggtatgcgtaattgggtcaactgt 38842397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 186 - 225
Target Start/End: Complemental strand, 42150046 - 42150007
Alignment:
Q  186 ttttctaatatattatttaagatatttaaactcaaaatta 225  Q
    ||||| ||||||||||| ||||||||||||||||||||||    
T  42150046 ttttccaatatattattcaagatatttaaactcaaaatta 42150007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 186 - 232
Target Start/End: Complemental strand, 14583817 - 14583771
Alignment:
Q  186 ttttctaatatattatttaagatatttaaactcaaaattatgtattg 232  Q
    |||||||| |||||||| ||||||||||| |||||||||||| ||||    
T  14583817 ttttctaacatattattaaagatatttaagctcaaaattatgcattg 14583771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 186 - 232
Target Start/End: Original strand, 25866234 - 25866280
Alignment:
Q  186 ttttctaatatattatttaagatatttaaactcaaaattatgtattg 232  Q
    |||||||| |||||||| ||||||||||| |||||||||||| ||||    
T  25866234 ttttctaacatattattcaagatatttaagctcaaaattatgaattg 25866280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 192 - 258
Target Start/End: Complemental strand, 28583192 - 28583126
Alignment:
Q  192 aatatattatttaagatatttaaactcaaaattatgtattgatatatgtaataaggtcaactgtgtc 258  Q
    ||||||||||| |||||||||||||||||||||| | |||| |||  ||||   |||||||||||||    
T  28583192 aatatattattcaagatatttaaactcaaaattacgcattggtatgcgtaactgggtcaactgtgtc 28583126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 192 - 258
Target Start/End: Complemental strand, 43184668 - 43184602
Alignment:
Q  192 aatatattatttaagatatttaaactcaaaattatgtattgatatatgtaataaggtcaactgtgtc 258  Q
    ||||||||||| ||||||||||||||||||||||   ||||||||| ||||   | |||||||||||    
T  43184668 aatatattattcaagatatttaaactcaaaattacacattgatatacgtaactggatcaactgtgtc 43184602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 186 - 232
Target Start/End: Original strand, 44362086 - 44362132
Alignment:
Q  186 ttttctaatatattatttaagatatttaaactcaaaattatgtattg 232  Q
    |||||||| |||||||| ||||||||||| |||||||||||| ||||    
T  44362086 ttttctaacatattattcaagatatttaagctcaaaattatgcattg 44362132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 192 - 225
Target Start/End: Complemental strand, 25691487 - 25691454
Alignment:
Q  192 aatatattatttaagatatttaaactcaaaatta 225  Q
    ||||||||||| ||||||||||||||||||||||    
T  25691487 aatatattattcaagatatttaaactcaaaatta 25691454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 186 - 227
Target Start/End: Complemental strand, 29917824 - 29917783
Alignment:
Q  186 ttttctaatatattatttaagatatttaaactcaaaattatg 227  Q
    ||||||||||||||||| |||||||||||  |||||||||||    
T  29917824 ttttctaatatattattcaagatatttaagatcaaaattatg 29917783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 201 - 258
Target Start/End: Original strand, 44947185 - 44947242
Alignment:
Q  201 tttaagatatttaaactcaaaattatgtattgatatatgtaataaggtcaactgtgtc 258  Q
    ||||| |||||||| |||||||||||| |||| |||  |||||| |||||||||||||    
T  44947185 tttaatatatttaagctcaaaattatgcattggtatgcgtaatatggtcaactgtgtc 44947242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 186 - 258
Target Start/End: Original strand, 8123803 - 8123875
Alignment:
Q  186 ttttctaatatattatttaagatatttaaactcaaaattatgtattgatatatgtaataaggtcaactgtgtc 258  Q
    |||||||| |||||||| ||||| | ||| |||||||||||| ||||| ||   |||||||||||| ||||||    
T  8123803 ttttctaacatattattcaagatttataatctcaaaattatgcattgacatgcataataaggtcaaatgtgtc 8123875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 186 - 226
Target Start/End: Original strand, 18419163 - 18419203
Alignment:
Q  186 ttttctaatatattatttaagatatttaaactcaaaattat 226  Q
    |||||||| |||||||| ||||||||||| |||||||||||    
T  18419163 ttttctaacatattattcaagatatttaatctcaaaattat 18419203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 190 - 258
Target Start/End: Original strand, 32909224 - 32909292
Alignment:
Q  190 ctaatatattatttaagatatttaaactcaaaattatgtattgatatatgtaataaggtcaactgtgtc 258  Q
    ||||||||||||| ||||||||||| |||||| ||||| ||||| ||  |||||||  |||| ||||||    
T  32909224 ctaatatattattcaagatatttaagctcaaagttatgcattgacatgcgtaataaaatcaattgtgtc 32909292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 50; Significance: 1e-19; HSPs: 35)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 186 - 255
Target Start/End: Original strand, 45036528 - 45036597
Alignment:
Q  186 ttttctaatatattatttaagatatttaaactcaaaattatgtattgatatatgtaataaggtcaactgt 255  Q
    |||||||||||||||||||||||||||||||| ||||||||| |||| |||| |||||| ||||||||||    
T  45036528 ttttctaatatattatttaagatatttaaacttaaaattatgcattggtatacgtaatagggtcaactgt 45036597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 186 - 258
Target Start/End: Complemental strand, 11383943 - 11383871
Alignment:
Q  186 ttttctaatatattatttaagatatttaaactcaaaattatgtattgatatatgtaataaggtcaactgtgtc 258  Q
    ||||||||||||||||| ||||||||||||||||||||||||  ||| |||   |||||||||||||||||||    
T  11383943 ttttctaatatattattcaagatatttaaactcaaaattatgcgttggtatggataataaggtcaactgtgtc 11383871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 187 - 258
Target Start/End: Original strand, 2831874 - 2831945
Alignment:
Q  187 tttctaatatattatttaagatatttaaactcaaaattatgtattgatatatgtaataaggtcaactgtgtc 258  Q
    |||||||||||||||| ||||||||||| |||||||||||| ||| | ||  ||||||||||||||||||||    
T  2831874 tttctaatatattattcaagatatttaagctcaaaattatgcattaacatgcgtaataaggtcaactgtgtc 2831945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 186 - 253
Target Start/End: Complemental strand, 26436585 - 26436518
Alignment:
Q  186 ttttctaatatattatttaagatatttaaactcaaaattatgtattgatatatgtaataaggtcaact 253  Q
    ||||||||||||||||| |||||||||||||||||| ||||| ||||| ||  |||||||||||||||    
T  26436585 ttttctaatatattattcaagatatttaaactcaaagttatgcattgacatgcgtaataaggtcaact 26436518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 186 - 258
Target Start/End: Original strand, 44022433 - 44022505
Alignment:
Q  186 ttttctaatatattatttaagatatttaaactcaaaattatgtattgatatatgtaataaggtcaactgtgtc 258  Q
    ||||||||||||||||| || ||||||||  ||||||||||| ||||| ||  ||||||||||||||||||||    
T  44022433 ttttctaatatattattcaatatatttaagttcaaaattatgcattgacatgcgtaataaggtcaactgtgtc 44022505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 186 - 253
Target Start/End: Original strand, 18504637 - 18504704
Alignment:
Q  186 ttttctaatatattatttaagatatttaaactcaaaattatgtattgatatatgtaataaggtcaact 253  Q
    |||||| |||||||||| ||||||||||| ||| |||||||| ||||| ||| |||||||||||||||    
T  18504637 ttttctcatatattattcaagatatttaagctcgaaattatgcattgacatacgtaataaggtcaact 18504704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 186 - 255
Target Start/End: Complemental strand, 16125981 - 16125912
Alignment:
Q  186 ttttctaatatattatttaagatatttaaactcaaaattatgtattgatatatgtaataaggtcaactgt 255  Q
    ||||| ||||||||||| |||||||||||  ||||||||||| ||||||||  ||||| |||||||||||    
T  16125981 ttttcaaatatattattcaagatatttaaggtcaaaattatgcattgatatgcgtaattaggtcaactgt 16125912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 190 - 258
Target Start/End: Complemental strand, 7601291 - 7601223
Alignment:
Q  190 ctaatatattatttaagatatttaaactcaaaattatgtattgatatatgtaataaggtcaactgtgtc 258  Q
    ||||||||||||| ||||||||||| |||||| ||||| ||||| ||  ||||||| ||||||||||||    
T  7601291 ctaatatattattcaagatatttaagctcaaagttatgcattgacatgcgtaataaagtcaactgtgtc 7601223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 186 - 258
Target Start/End: Original strand, 8373599 - 8373671
Alignment:
Q  186 ttttctaatatattatttaagatatttaaactcaaaattatgtattgatatatgtaataaggtcaactgtgtc 258  Q
    ||||| ||||||||||| |||||||||||||| |||||||   ||||||||| |||||  |||||||||||||    
T  8373599 ttttccaatatattattcaagatatttaaacttaaaattacacattgatatacgtaattgggtcaactgtgtc 8373671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 186 - 258
Target Start/End: Complemental strand, 10333476 - 10333404
Alignment:
Q  186 ttttctaatatattatttaagatatttaaactcaaaattatgtattgatatatgtaataaggtcaactgtgtc 258  Q
    ||||| ||||||||||| |||||||||||||||||||||| | |||| |||  |||||  |||||||||||||    
T  10333476 ttttccaatatattattcaagatatttaaactcaaaattacgcattggtatgcgtaatcgggtcaactgtgtc 10333404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 186 - 258
Target Start/End: Original strand, 20682807 - 20682879
Alignment:
Q  186 ttttctaatatattatttaagatatttaaactcaaaattatgtattgatatatgtaataaggtcaactgtgtc 258  Q
    |||||||| |||||||| |||||||||||||||||||||||| ||||| ||  |||||   ||||||||||||    
T  20682807 ttttctaacatattattcaagatatttaaactcaaaattatgcattgaaatgcgtaatggagtcaactgtgtc 20682879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 186 - 253
Target Start/End: Complemental strand, 1749070 - 1749003
Alignment:
Q  186 ttttctaatatattatttaagatatttaaactcaaaattatgtattgatatatgtaataaggtcaact 253  Q
    ||||| ||||||||||| |||||||||||||||||||||| | |||| |||| |||||  ||||||||    
T  1749070 ttttccaatatattattcaagatatttaaactcaaaattacgcattggtatacgtaattgggtcaact 1749003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 186 - 225
Target Start/End: Original strand, 38963960 - 38963999
Alignment:
Q  186 ttttctaatatattatttaagatatttaaactcaaaatta 225  Q
    ||||||||||||||||| ||||||||||||||||||||||    
T  38963960 ttttctaatatattattcaagatatttaaactcaaaatta 38963999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 186 - 236
Target Start/End: Complemental strand, 20917825 - 20917775
Alignment:
Q  186 ttttctaatatattatttaagatatttaaactcaaaattatgtattgatat 236  Q
    ||||| ||||||||||| |||||||||||||||||||||| | ||||||||    
T  20917825 ttttccaatatattattcaagatatttaaactcaaaattacgcattgatat 20917775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 186 - 232
Target Start/End: Complemental strand, 22718441 - 22718395
Alignment:
Q  186 ttttctaatatattatttaagatatttaaactcaaaattatgtattg 232  Q
    |||||||| |||||||| ||||||||||| |||||||||||||||||    
T  22718441 ttttctaacatattattcaagatatttaagctcaaaattatgtattg 22718395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 192 - 258
Target Start/End: Original strand, 40471907 - 40471973
Alignment:
Q  192 aatatattatttaagatatttaaactcaaaattatgtattgatatatgtaataaggtcaactgtgtc 258  Q
    ||||||||||| |||||||||||||||||||||| | |||| |||  |||||  |||||||||||||    
T  40471907 aatatattattcaagatatttaaactcaaaattacgcattggtatgcgtaattgggtcaactgtgtc 40471973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 192 - 258
Target Start/End: Complemental strand, 41319816 - 41319750
Alignment:
Q  192 aatatattatttaagatatttaaactcaaaattatgtattgatatatgtaataaggtcaactgtgtc 258  Q
    ||||||||||| |||||||||||||||||||||| | |||| |||  |||||  |||||||||||||    
T  41319816 aatatattattcaagatatttaaactcaaaattacgcattggtatgcgtaattgggtcaactgtgtc 41319750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 193 - 258
Target Start/End: Original strand, 4137581 - 4137646
Alignment:
Q  193 atatattatttaagatatttaaactcaaaattatgtattgatatatgtaataaggtcaactgtgtc 258  Q
    |||||||||| |||||||||||||||||||||| | |||| |||  |||||  |||||||||||||    
T  4137581 atatattattcaagatatttaaactcaaaattacgcattggtatgcgtaattgggtcaactgtgtc 4137646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 186 - 255
Target Start/End: Original strand, 16333644 - 16333713
Alignment:
Q  186 ttttctaatatattatttaagatatttaaactcaaaattatgtattgatatatgtaataaggtcaactgt 255  Q
    ||||| ||||||||||| |||||||||||  ||||||||||| |||| |||  ||||| |||||||||||    
T  16333644 ttttcaaatatattattcaagatatttaaggtcaaaattatgcattggtatgcgtaattaggtcaactgt 16333713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 186 - 258
Target Start/End: Complemental strand, 7724508 - 7724436
Alignment:
Q  186 ttttctaatatattatttaagatatttaaactcaaaattatgtattgatatatgtaataaggtcaactgtgtc 258  Q
    ||||| ||||||||||| ||||||||||||| |||||||| | |||| |||  |||||  |||||||||||||    
T  7724508 ttttccaatatattattcaagatatttaaacccaaaattacgcattggtatgcgtaattgggtcaactgtgtc 7724436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 186 - 226
Target Start/End: Original strand, 12209154 - 12209194
Alignment:
Q  186 ttttctaatatattatttaagatatttaaactcaaaattat 226  Q
    ||||| ||||||||||| |||||||||||||||||||||||    
T  12209154 ttttccaatatattattcaagatatttaaactcaaaattat 12209194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 186 - 258
Target Start/End: Original strand, 15177534 - 15177606
Alignment:
Q  186 ttttctaatatattatttaagatatttaaactcaaaattatgtattgatatatgtaataaggtcaactgtgtc 258  Q
    |||| |||||||||| | |||||||||||||||||||||||| |||   || ||||||| ||||| |||||||    
T  15177534 ttttataatatattactcaagatatttaaactcaaaattatgcattttcatgtgtaatatggtcatctgtgtc 15177606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 186 - 258
Target Start/End: Complemental strand, 31603315 - 31603243
Alignment:
Q  186 ttttctaatatattatttaagatatttaaactcaaaattatgtattgatatatgtaataaggtcaactgtgtc 258  Q
    ||||| ||||||||||| |||||||||||||||||||||| | |||| |||   ||||  |||||||||||||    
T  31603315 ttttccaatatattattcaagatatttaaactcaaaattacgcattggtatgcctaattgggtcaactgtgtc 31603243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 186 - 258
Target Start/End: Original strand, 41436997 - 41437069
Alignment:
Q  186 ttttctaatatattatttaagatatttaaactcaaaattatgtattgatatatgtaataaggtcaactgtgtc 258  Q
    ||||| ||||||||||| |||||||||||||||||||||| | |||| |||  ||||   |||||||||||||    
T  41436997 ttttccaatatattattcaagatatttaaactcaaaattacgcattggtatgcgtaaatgggtcaactgtgtc 41437069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 186 - 225
Target Start/End: Original strand, 5096413 - 5096452
Alignment:
Q  186 ttttctaatatattatttaagatatttaaactcaaaatta 225  Q
    ||||| ||||||||||| ||||||||||||||||||||||    
T  5096413 ttttccaatatattattcaagatatttaaactcaaaatta 5096452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 202 - 257
Target Start/End: Original strand, 8896452 - 8896507
Alignment:
Q  202 ttaagatatttaaactcaaaattatgtattgatatatgtaataaggtcaactgtgt 257  Q
    ||||||||||||  |||||||||||| ||||| || ||||||| ||||||||||||    
T  8896452 ttaagatatttagcctcaaaattatgcattgacatgtgtaatagggtcaactgtgt 8896507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 194 - 253
Target Start/End: Original strand, 9273790 - 9273849
Alignment:
Q  194 tatattatttaagatatttaaactcaaaattatgtattgatatatgtaataaggtcaact 253  Q
    ||||||||| |||||||||||  ||||| ||||| ||||| ||| |||||||||||||||    
T  9273790 tatattattcaagatatttaagttcaaagttatgcattgacatacgtaataaggtcaact 9273849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 186 - 225
Target Start/End: Complemental strand, 37987834 - 37987795
Alignment:
Q  186 ttttctaatatattatttaagatatttaaactcaaaatta 225  Q
    ||||| ||||||||||| ||||||||||||||||||||||    
T  37987834 ttttccaatatattattcaagatatttaaactcaaaatta 37987795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 186 - 233
Target Start/End: Original strand, 41575727 - 41575774
Alignment:
Q  186 ttttctaatatattatttaagatatttaaactcaaaattatgtattga 233  Q
    |||||||| |||||||| ||||||||||| |||||||||||| |||||    
T  41575727 ttttctaacatattattcaagatatttaagctcaaaattatgcattga 41575774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 186 - 232
Target Start/End: Complemental strand, 6730001 - 6729955
Alignment:
Q  186 ttttctaatatattatttaagatatttaaactcaaaattatgtattg 232  Q
    |||||||| |||||||| ||||||||||| |||||||||||| ||||    
T  6730001 ttttctaacatattattcaagatatttaagctcaaaattatgcattg 6729955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 186 - 232
Target Start/End: Original strand, 37317041 - 37317087
Alignment:
Q  186 ttttctaatatattatttaagatatttaaactcaaaattatgtattg 232  Q
    |||||||| |||||||| ||||||||||| |||||||||||| ||||    
T  37317041 ttttctaacatattattcaagatatttaagctcaaaattatgcattg 37317087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 192 - 258
Target Start/End: Complemental strand, 42754247 - 42754181
Alignment:
Q  192 aatatattatttaagatatttaaactcaaaattatgtattgatatatgtaataaggtcaactgtgtc 258  Q
    ||||||||||| ||||||||||||||||||||||   |||| |||  |||||  |||||||||||||    
T  42754247 aatatattattcaagatatttaaactcaaaattacacattggtatgcgtaattgggtcaactgtgtc 42754181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 186 - 258
Target Start/End: Complemental strand, 15770980 - 15770908
Alignment:
Q  186 ttttctaatatattatttaagatatttaaactcaaaattatgtattgatatatgtaataaggtcaactgtgtc 258  Q
    |||||| ||| |||| | ||| |||||||| |||||||||||||||| ||| ||||| |  ||||||||||||    
T  15770980 ttttcttatagattagtaaagttatttaaagtcaaaattatgtattggtatgtgtaacagagtcaactgtgtc 15770908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 186 - 258
Target Start/End: Complemental strand, 16127679 - 16127607
Alignment:
Q  186 ttttctaatatattatttaagatatttaaactcaaaattatgtattgatatatgtaataaggtcaactgtgtc 258  Q
    ||||| |||||||||||||||||||||||  || |||||||| ||||  ||  ||||| ||||||| ||||||    
T  16127679 ttttcaaatatattatttaagatatttaaggtccaaattatgcattggcatgcgtaattaggtcaattgtgtc 16127607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 186 - 258
Target Start/End: Original strand, 25627188 - 25627260
Alignment:
Q  186 ttttctaatatattatttaagatatttaaactcaaaattatgtattgatatatgtaataaggtcaactgtgtc 258  Q
    |||| |||||||||||| || |||||||| |||||||||||| ||||  ||   |||||||||||||| ||||    
T  25627188 ttttataatatattattcaatatatttaagctcaaaattatgcattgtcatgcataataaggtcaactatgtc 25627260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 49; Significance: 4e-19; HSPs: 30)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 186 - 258
Target Start/End: Complemental strand, 41007856 - 41007784
Alignment:
Q  186 ttttctaatatattatttaagatatttaaactcaaaattatgtattgatatatgtaataaggtcaactgtgtc 258  Q
    |||| |||||||||||| |||||||||||||||||||||||  ||||| ||| ||||||||||||||||||||    
T  41007856 ttttataatatattattcaagatatttaaactcaaaattatacattgacatacgtaataaggtcaactgtgtc 41007784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 186 - 255
Target Start/End: Complemental strand, 9136561 - 9136492
Alignment:
Q  186 ttttctaatatattatttaagatatttaaactcaaaattatgtattgatatatgtaataaggtcaactgt 255  Q
    |||||||||| |||||| || ||||||||||||||||||||||||||  |||| ||||||||||||||||    
T  9136561 ttttctaatacattattcaatatatttaaactcaaaattatgtattgtcatatataataaggtcaactgt 9136492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 186 - 258
Target Start/End: Original strand, 38069216 - 38069288
Alignment:
Q  186 ttttctaatatattatttaagatatttaaactcaaaattatgtattgatatatgtaataaggtcaactgtgtc 258  Q
    ||||| |||||||||||||||||||||||||||||||||| | ||||||||  |||||  |||||||||||||    
T  38069216 ttttccaatatattatttaagatatttaaactcaaaattacgcattgatatgcgtaattgggtcaactgtgtc 38069288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 188 - 258
Target Start/End: Original strand, 5842285 - 5842355
Alignment:
Q  188 ttctaatatattatttaagatatttaaactcaaaattatgtattgatatatgtaataaggtcaactgtgtc 258  Q
    ||||||||||||||| ||||||||||| |||||||||||| ||||| ||  |||||| |||||||||||||    
T  5842285 ttctaatatattattcaagatatttaagctcaaaattatgcattgacattcgtaatatggtcaactgtgtc 5842355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 186 - 258
Target Start/End: Complemental strand, 3124045 - 3123973
Alignment:
Q  186 ttttctaatatattatttaagatatttaaactcaaaattatgtattgatatatgtaataaggtcaactgtgtc 258  Q
    ||||||||||||||||| ||||||||||| ||||||  |||| ||||| ||  ||||||||||||||||||||    
T  3124045 ttttctaatatattattcaagatatttaagctcaaagatatgcattgacatgcgtaataaggtcaactgtgtc 3123973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 186 - 258
Target Start/End: Complemental strand, 16807045 - 16806973
Alignment:
Q  186 ttttctaatatattatttaagatatttaaactcaaaattatgtattgatatatgtaataaggtcaactgtgtc 258  Q
    ||||| ||||||||||| |||||||||||||||||||||||| |||| |||  |||||  |||||||||||||    
T  16807045 ttttccaatatattattcaagatatttaaactcaaaattatgcattggtatgcgtaattgggtcaactgtgtc 16806973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 186 - 258
Target Start/End: Original strand, 18756754 - 18756825
Alignment:
Q  186 ttttctaatatattatttaagatatttaaactcaaaattatgtattgatatatgtaataaggtcaactgtgtc 258  Q
    ||||||||||||||||| || ||| ||||||||||||||||| ||||||||  ||||| ||||||||||||||    
T  18756754 ttttctaatatattattcaaaatagttaaactcaaaattatgcattgatatgcgtaat-aggtcaactgtgtc 18756825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 190 - 258
Target Start/End: Complemental strand, 25571587 - 25571519
Alignment:
Q  190 ctaatatattatttaagatatttaaactcaaaattatgtattgatatatgtaataaggtcaactgtgtc 258  Q
    ||||||||||||| ||||||||||| || ||||||||||||||| ||  |||||| |||||||||||||    
T  25571587 ctaatatattattcaagatatttaagcttaaaattatgtattgacattcgtaatagggtcaactgtgtc 25571519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 186 - 258
Target Start/End: Complemental strand, 35693729 - 35693657
Alignment:
Q  186 ttttctaatatattatttaagatatttaaactcaaaattatgtattgatatatgtaataaggtcaactgtgtc 258  Q
    ||||| ||||||||||| |||||||||||||||||||||| | ||||||||  |||||  |||||||||||||    
T  35693729 ttttccaatatattattcaagatatttaaactcaaaattacgcattgatatgcgtaattgggtcaactgtgtc 35693657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 186 - 258
Target Start/End: Original strand, 38441978 - 38442050
Alignment:
Q  186 ttttctaatatattatttaagatatttaaactcaaaattatgtattgatatatgtaataaggtcaactgtgtc 258  Q
    |||| |||||||||||| ||||||||||| |||||||||||| ||| ||||| ||| ||| ||||||||||||    
T  38441978 ttttttaatatattattcaagatatttaagctcaaaattatgcattaatatacgtagtaaagtcaactgtgtc 38442050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 186 - 258
Target Start/End: Original strand, 48448683 - 48448755
Alignment:
Q  186 ttttctaatatattatttaagatatttaaactcaaaattatgtattgatatatgtaataaggtcaactgtgtc 258  Q
    ||||||||||||||||| ||||||||||| |||||||||||| |||  ||| ||||||  |||||||||||||    
T  48448683 ttttctaatatattattcaagatatttaagctcaaaattatgcattagtatgtgtaattgggtcaactgtgtc 48448755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 186 - 258
Target Start/End: Complemental strand, 40818596 - 40818522
Alignment:
Q  186 ttttctaatatattatttaagatattt--aaactcaaaattatgtattgatatatgtaataaggtcaactgtgtc 258  Q
    ||||||||||||||||| ||||||| |  || |||||||||||| |||| ||||||||||| |||||||||||||    
T  40818596 ttttctaatatattattcaagatatattgaagctcaaaattatgcattggtatatgtaatagggtcaactgtgtc 40818522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 186 - 227
Target Start/End: Original strand, 4620229 - 4620270
Alignment:
Q  186 ttttctaatatattatttaagatatttaaactcaaaattatg 227  Q
    ||||||||||||||||| ||||||||||||||||||||||||    
T  4620229 ttttctaatatattattcaagatatttaaactcaaaattatg 4620270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 186 - 258
Target Start/End: Complemental strand, 9173235 - 9173163
Alignment:
Q  186 ttttctaatatattatttaagatatttaaactcaaaattatgtattgatatatgtaataaggtcaactgtgtc 258  Q
    |||| |||||||||||| |||||||||||  ||||||||||| ||||| ||  |||||| |||||||||||||    
T  9173235 ttttataatatattattcaagatatttaagttcaaaattatgcattgacatgcgtaatagggtcaactgtgtc 9173163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 186 - 258
Target Start/End: Original strand, 19817500 - 19817572
Alignment:
Q  186 ttttctaatatattatttaagatatttaaactcaaaattatgtattgatatatgtaataaggtcaactgtgtc 258  Q
    ||||||||||||||||| |||||||||||||| ||||||||| |||   ||  ||||||||||||||| ||||    
T  19817500 ttttctaatatattattcaagatatttaaacttaaaattatgcattagcatgcgtaataaggtcaactatgtc 19817572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 186 - 258
Target Start/End: Complemental strand, 46242377 - 46242305
Alignment:
Q  186 ttttctaatatattatttaagatatttaaactcaaaattatgtattgatatatgtaataaggtcaactgtgtc 258  Q
    |||||| |||||||||||||||||||||| |||||| ||||| |||   ||  ||||||||||||||||||||    
T  46242377 ttttctgatatattatttaagatatttaagctcaaagttatgcattatcatgcgtaataaggtcaactgtgtc 46242305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 186 - 236
Target Start/End: Complemental strand, 25273916 - 25273866
Alignment:
Q  186 ttttctaatatattatttaagatatttaaactcaaaattatgtattgatat 236  Q
    ||||| ||||||||||| |||||||||||||||||||||| | ||||||||    
T  25273916 ttttccaatatattattcaagatatttaaactcaaaattacgcattgatat 25273866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 196 - 258
Target Start/End: Complemental strand, 26651137 - 26651075
Alignment:
Q  196 tattatttaagatatttaaactcaaaattatgtattgatatatgtaataaggtcaactgtgtc 258  Q
    ||||||| ||||||||||| ||||||||||||| ||| |||  |||||| |||||||||||||    
T  26651137 tattattcaagatatttaagctcaaaattatgttttggtatgcgtaatagggtcaactgtgtc 26651075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 193 - 251
Target Start/End: Original strand, 32222724 - 32222782
Alignment:
Q  193 atatattatttaagatatttaaactcaaaattatgtattgatatatgtaataaggtcaa 251  Q
    |||||||||| |||||| ||||||||||| ||||||||||| ||| | |||||||||||    
T  32222724 atatattattcaagataattaaactcaaagttatgtattgacatacgcaataaggtcaa 32222782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 186 - 231
Target Start/End: Complemental strand, 14543683 - 14543638
Alignment:
Q  186 ttttctaatatattatttaagatatttaaactcaaaattatgtatt 231  Q
    |||||||||| |||||| ||||||||||||||||||||| ||||||    
T  14543683 ttttctaatagattattaaagatatttaaactcaaaattgtgtatt 14543638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 186 - 255
Target Start/End: Complemental strand, 31496545 - 31496477
Alignment:
Q  186 ttttctaatatattatttaagatatttaaactcaaaattatgtattgatatatgtaataaggtcaactgt 255  Q
    ||||||||||| ||||| |||||||||||  ||||||||||| ||||| ||  |||||||||||||||||    
T  31496545 ttttctaatat-ttattcaagatatttaagttcaaaattatgcattgacatgcgtaataaggtcaactgt 31496477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 186 - 255
Target Start/End: Original strand, 33376939 - 33377008
Alignment:
Q  186 ttttctaatatattatttaagatatttaaactcaaaattatgtattgatatatgtaataaggtcaactgt 255  Q
    ||||||||||||||||| ||||||||||| |||||| ||||  ||||| |||| ||| || |||||||||    
T  33376939 ttttctaatatattattcaagatatttaagctcaaagttatacattgacatatataacaaagtcaactgt 33377008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 186 - 231
Target Start/End: Original strand, 38850867 - 38850912
Alignment:
Q  186 ttttctaatatattatttaagatatttaaactcaaaattatgtatt 231  Q
    ||||||||||||||||| ||||||||||| ||||||||||| ||||    
T  38850867 ttttctaatatattattcaagatatttaagctcaaaattatatatt 38850912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 186 - 258
Target Start/End: Complemental strand, 32345682 - 32345610
Alignment:
Q  186 ttttctaatatattatttaagatatttaaactcaaaattatgtattgatatatgtaataaggtcaactgtgtc 258  Q
    ||||| ||||||||||| |||||||||||||||||||||| | |||| |||  |||||   ||||||||||||    
T  32345682 ttttccaatatattattcaagatatttaaactcaaaattacgcattggtatgcgtaattgagtcaactgtgtc 32345610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 186 - 258
Target Start/End: Original strand, 36820041 - 36820113
Alignment:
Q  186 ttttctaatatattatttaagatatttaaactcaaaattatgtattgatatatgtaataaggtcaactgtgtc 258  Q
    ||||| ||||||||||| | |||||||||||||||||||| | |||| |||  |||||  |||||||||||||    
T  36820041 ttttccaatatattattcatgatatttaaactcaaaattacgcattggtatgcgtaattgggtcaactgtgtc 36820113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 186 - 258
Target Start/End: Complemental strand, 47713331 - 47713259
Alignment:
Q  186 ttttctaatatattatttaagatatttaaactcaaaattatgtattgatatatgtaataaggtcaactgtgtc 258  Q
    |||| |||||||||||| | ||||||||| |||||| ||||| ||||| ||  ||||||||||||| ||||||    
T  47713331 ttttataatatattattcacgatatttaagctcaaagttatgcattgacatgcgtaataaggtcaattgtgtc 47713259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 186 - 225
Target Start/End: Complemental strand, 27621194 - 27621155
Alignment:
Q  186 ttttctaatatattatttaagatatttaaactcaaaatta 225  Q
    ||||| ||||||||||| ||||||||||||||||||||||    
T  27621194 ttttccaatatattattcaagatatttaaactcaaaatta 27621155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 186 - 227
Target Start/End: Complemental strand, 32972234 - 32972193
Alignment:
Q  186 ttttctaatatattatttaagatatttaaactcaaaattatg 227  Q
    |||||||| |||||||| ||||||||||| ||||||||||||    
T  32972234 ttttctaacatattattcaagatatttaagctcaaaattatg 32972193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 192 - 257
Target Start/End: Original strand, 41844941 - 41845006
Alignment:
Q  192 aatatattatttaagatatttaaactcaaaattatgtattgatatatgtaataaggtcaactgtgt 257  Q
    ||||||||||| ||||||||||| |||||| ||||| ||| | ||  ||||||||||||| |||||    
T  41844941 aatatattattgaagatatttaagctcaaagttatgcattaaaatgcgtaataaggtcaaatgtgt 41845006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 186 - 258
Target Start/End: Complemental strand, 36404825 - 36404753
Alignment:
Q  186 ttttctaatatattatttaagatatttaaactcaaaattatgtattgatatatgtaataaggtcaactgtgtc 258  Q
    ||||||||||||||||| || |||||||| |||||| ||||| ||||| ||  |||| ||  |||||||||||    
T  36404825 ttttctaatatattattcaatatatttaagctcaaagttatgcattgacatgcgtaaaaaaatcaactgtgtc 36404753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 49; Significance: 4e-19; HSPs: 23)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 186 - 258
Target Start/End: Original strand, 12677145 - 12677217
Alignment:
Q  186 ttttctaatatattatttaagatatttaaactcaaaattatgtattgatatatgtaataaggtcaactgtgtc 258  Q
    ||||||||||||||||| || ||||||||||||||||||||| |||||||| |||||||| ||||||| ||||    
T  12677145 ttttctaatatattattcaaaatatttaaactcaaaattatgcattgatatgtgtaataaagtcaactatgtc 12677217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 186 - 257
Target Start/End: Complemental strand, 16661504 - 16661433
Alignment:
Q  186 ttttctaatatattatttaagatatttaaactcaaaattatgtattgatatatgtaataaggtcaactgtgt 257  Q
    |||| |||||||||||| ||||||||||| |||||| ||||||||||| ||| |||||||||||||||||||    
T  16661504 ttttataatatattattcaagatatttaagctcaaagttatgtattgacatacgtaataaggtcaactgtgt 16661433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 186 - 258
Target Start/End: Original strand, 10105976 - 10106048
Alignment:
Q  186 ttttctaatatattatttaagatatttaaactcaaaattatgtattgatatatgtaataaggtcaactgtgtc 258  Q
    ||||||| ||||||||| |||||||| || |||||||||||| ||||||||| |||||| |||||||||||||    
T  10105976 ttttctagtatattattcaagatattaaatctcaaaattatgcattgatatacgtaatatggtcaactgtgtc 10106048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 186 - 258
Target Start/End: Original strand, 2141733 - 2141805
Alignment:
Q  186 ttttctaatatattatttaagatatttaaactcaaaattatgtattgatatatgtaataaggtcaactgtgtc 258  Q
    ||||| ||||||||||| |||||||||||||||||||||| | |||| |||| |||||  |||||||||||||    
T  2141733 ttttccaatatattattcaagatatttaaactcaaaattacgcattggtatacgtaattgggtcaactgtgtc 2141805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 186 - 258
Target Start/End: Complemental strand, 6188559 - 6188487
Alignment:
Q  186 ttttctaatatattatttaagatatttaaactcaaaattatgtattgatatatgtaataaggtcaactgtgtc 258  Q
    ||||| |||||||||||||||||||||||||||||||||| | |||| |||  |||||  |||||||||||||    
T  6188559 ttttccaatatattatttaagatatttaaactcaaaattacgcattggtatgcgtaattgggtcaactgtgtc 6188487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 192 - 258
Target Start/End: Complemental strand, 2667222 - 2667156
Alignment:
Q  192 aatatattatttaagatatttaaactcaaaattatgtattgatatatgtaataaggtcaactgtgtc 258  Q
    ||||||||||| |||||||||||||||||||||| | |||| |||  ||||| ||||||||||||||    
T  2667222 aatatattattcaagatatttaaactcaaaattacgcattggtatgcgtaattaggtcaactgtgtc 2667156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 186 - 258
Target Start/End: Complemental strand, 6142410 - 6142338
Alignment:
Q  186 ttttctaatatattatttaagatatttaaactcaaaattatgtattgatatatgtaataaggtcaactgtgtc 258  Q
    ||||| ||||||||||| |||||||||||||||||||||| | |||| |||  |||||  |||||||||||||    
T  6142410 ttttccaatatattattcaagatatttaaactcaaaattacgcattggtatgcgtaattgggtcaactgtgtc 6142338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 186 - 258
Target Start/End: Original strand, 16969544 - 16969616
Alignment:
Q  186 ttttctaatatattatttaagatatttaaactcaaaattatgtattgatatatgtaataaggtcaactgtgtc 258  Q
    ||||| ||||||||||| |||||||||||||||||||||| | |||| |||  |||||  |||||||||||||    
T  16969544 ttttccaatatattattcaagatatttaaactcaaaattacgcattggtatgcgtaattgggtcaactgtgtc 16969616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 186 - 258
Target Start/End: Complemental strand, 17496231 - 17496159
Alignment:
Q  186 ttttctaatatattatttaagatatttaaactcaaaattatgtattgatatatgtaataaggtcaactgtgtc 258  Q
    ||||| ||||||||||| |||||||||||||||||||||| | |||| |||  |||||  |||||||||||||    
T  17496231 ttttccaatatattattcaagatatttaaactcaaaattacgcattggtatgcgtaattgggtcaactgtgtc 17496159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 186 - 258
Target Start/End: Complemental strand, 29514930 - 29514858
Alignment:
Q  186 ttttctaatatattatttaagatatttaaactcaaaattatgtattgatatatgtaataaggtcaactgtgtc 258  Q
    ||||| ||||||||||| |||||||||||||||||||||| | ||||||||  |||||  |||||| ||||||    
T  29514930 ttttccaatatattattcaagatatttaaactcaaaattacgcattgatatgcgtaattgggtcaattgtgtc 29514858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 186 - 232
Target Start/End: Original strand, 26210912 - 26210958
Alignment:
Q  186 ttttctaatatattatttaagatatttaaactcaaaattatgtattg 232  Q
    ||||||||||||||||| |||||||||||  ||||||||||||||||    
T  26210912 ttttctaatatattattaaagatatttaagttcaaaattatgtattg 26210958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 186 - 258
Target Start/End: Original strand, 30699426 - 30699499
Alignment:
Q  186 ttttctaatatattatttaagatatttaaactcaaaattatgtatt-gatatatgtaataaggtcaactgtgtc 258  Q
    |||||||||||||||||  ||||||||||||||||||||| | ||| | |||| |||||  |||||||||||||    
T  30699426 ttttctaatatattattctagatatttaaactcaaaattacgcattgggtatacgtaatttggtcaactgtgtc 30699499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 186 - 258
Target Start/End: Original strand, 995728 - 995800
Alignment:
Q  186 ttttctaatatattatttaagatatttaaactcaaaattatgtattgatatatgtaataaggtcaactgtgtc 258  Q
    ||||| ||||||||||| ||||||||||||||||||||||   |||| |||  |||||  |||||||||||||    
T  995728 ttttccaatatattattcaagatatttaaactcaaaattactcattggtatgcgtaattgggtcaactgtgtc 995800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 186 - 258
Target Start/End: Original strand, 2397935 - 2398007
Alignment:
Q  186 ttttctaatatattatttaagatatttaaactcaaaattatgtattgatatatgtaataaggtcaactgtgtc 258  Q
    ||||| ||||||||||| |||||||||||||| ||||||| | |||| |||  |||||  |||||||||||||    
T  2397935 ttttccaatatattattcaagatatttaaacttaaaattacgcattggtatgcgtaattgggtcaactgtgtc 2398007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 186 - 258
Target Start/End: Complemental strand, 2656573 - 2656501
Alignment:
Q  186 ttttctaatatattatttaagatatttaaactcaaaattatgtattgatatatgtaataaggtcaactgtgtc 258  Q
    ||||| ||||||||||| |||||||||||||| ||||||| | |||| |||  |||||  |||||||||||||    
T  2656573 ttttccaatatattattcaagatatttaaacttaaaattacgcattggtatgcgtaatttggtcaactgtgtc 2656501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 194 - 258
Target Start/End: Complemental strand, 4890021 - 4889957
Alignment:
Q  194 tatattatttaagatatttaaactcaaaattatgtattgatatatgtaataaggtcaactgtgtc 258  Q
    ||||||||| ||||||||||| |||||||||||| ||||| ||  |||||||| ||||| |||||    
T  4890021 tatattattcaagatatttaagctcaaaattatgcattgacatgcgtaataagatcaaccgtgtc 4889957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 186 - 258
Target Start/End: Complemental strand, 31948545 - 31948474
Alignment:
Q  186 ttttctaatatattatttaagatatttaaactcaaaattatgtattgatatatgtaataaggtcaactgtgtc 258  Q
    ||||||||||||||||| |||||| |||| |||| ||||||| ||||| ||  ||||||||||||| ||||||    
T  31948545 ttttctaatatattattcaagata-ttaagctcagaattatgcattgacatgcgtaataaggtcaattgtgtc 31948474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 186 - 258
Target Start/End: Original strand, 35117441 - 35117513
Alignment:
Q  186 ttttctaatatattatttaagatatttaaactcaaaattatgtattgatatatgtaataaggtcaactgtgtc 258  Q
    ||||||||||||||||  ||||||||||| |||||||||||| |||  |||  |||||  |||||||||||||    
T  35117441 ttttctaatatattatccaagatatttaagctcaaaattatgcattagtatgcgtaattgggtcaactgtgtc 35117513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 186 - 225
Target Start/End: Original strand, 2913062 - 2913101
Alignment:
Q  186 ttttctaatatattatttaagatatttaaactcaaaatta 225  Q
    ||||| ||||||||||| ||||||||||||||||||||||    
T  2913062 ttttccaatatattattcaagatatttaaactcaaaatta 2913101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 186 - 257
Target Start/End: Complemental strand, 10109314 - 10109243
Alignment:
Q  186 ttttctaatatattatttaagatatttaaactcaaaattatgtattgatatatgtaataaggtcaactgtgt 257  Q
    ||||||||||||||||| ||||||||||| |||||| ||||| |||   ||  |||||||||| ||||||||    
T  10109314 ttttctaatatattattcaagatatttaagctcaaagttatgcatttgcatgcgtaataaggtaaactgtgt 10109243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 186 - 225
Target Start/End: Original strand, 24825330 - 24825369
Alignment:
Q  186 ttttctaatatattatttaagatatttaaactcaaaatta 225  Q
    ||||| ||||||||||| ||||||||||||||||||||||    
T  24825330 ttttccaatatattattcaagatatttaaactcaaaatta 24825369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 186 - 225
Target Start/End: Complemental strand, 32541380 - 32541341
Alignment:
Q  186 ttttctaatatattatttaagatatttaaactcaaaatta 225  Q
    ||||| ||||||||||| ||||||||||||||||||||||    
T  32541380 ttttccaatatattattcaagatatttaaactcaaaatta 32541341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 204 - 258
Target Start/End: Complemental strand, 33348022 - 33347968
Alignment:
Q  204 aagatatttaaactcaaaattatgtattgatatatgtaataaggtcaactgtgtc 258  Q
    |||||||||||||||||||||||| ||| ||||  |||||  |||||||||||||    
T  33348022 aagatatttaaactcaaaattatgcattaatatgcgtaattgggtcaactgtgtc 33347968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 49; Significance: 4e-19; HSPs: 44)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 186 - 258
Target Start/End: Original strand, 17492832 - 17492904
Alignment:
Q  186 ttttctaatatattatttaagatatttaaactcaaaattatgtattgatatatgtaataaggtcaactgtgtc 258  Q
    ||||||||||||||||| ||||||||||| |||||| ||||| |||||||| ||||||||||| |||||||||    
T  17492832 ttttctaatatattattcaagatatttaagctcaaagttatgcattgatatgtgtaataaggttaactgtgtc 17492904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 186 - 252
Target Start/End: Complemental strand, 1613116 - 1613050
Alignment:
Q  186 ttttctaatatattatttaagatatttaaactcaaaattatgtattgatatatgtaataaggtcaac 252  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||| ||  |||||| |||||||    
T  1613116 ttttctaatatattattcaagatatttaaactcaaaattatgtattgacatgcgtaatagggtcaac 1613050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 186 - 258
Target Start/End: Original strand, 29821215 - 29821287
Alignment:
Q  186 ttttctaatatattatttaagatatttaaactcaaaattatgtattgatatatgtaataaggtcaactgtgtc 258  Q
    ||||||||||||||||| ||||||||||| |||||||||||| |||| |||  |||||| |||||||||||||    
T  29821215 ttttctaatatattattcaagatatttaagctcaaaattatgcattggtatgcgtaatagggtcaactgtgtc 29821287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 190 - 258
Target Start/End: Original strand, 24505680 - 24505748
Alignment:
Q  190 ctaatatattatttaagatatttaaactcaaaattatgtattgatatatgtaataaggtcaactgtgtc 258  Q
    ||||||||||||| ||||||||||| |||||| ||||||||||| ||  ||||||||||||||| ||||    
T  24505680 ctaatatattattcaagatatttaagctcaaagttatgtattgacatgcgtaataaggtcaactatgtc 24505748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 186 - 254
Target Start/End: Original strand, 30386996 - 30387064
Alignment:
Q  186 ttttctaatatattatttaagatatttaaactcaaaattatgtattgatatatgtaataaggtcaactg 254  Q
    |||| |||||||||||| |||||||| || ||| ||||||||||||||||| |||| ||||||||||||    
T  30386996 ttttataatatattattcaagatattaaagctcgaaattatgtattgatatgtgtagtaaggtcaactg 30387064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 186 - 258
Target Start/End: Original strand, 37164182 - 37164254
Alignment:
Q  186 ttttctaatatattatttaagatatttaaactcaaaattatgtattgatatatgtaataaggtcaactgtgtc 258  Q
    ||||||| ||||||||| ||||||||||| |||||||||||| |||| |||  |||||| |||||||||||||    
T  37164182 ttttctattatattattcaagatatttaagctcaaaattatgcattggtatgcgtaatagggtcaactgtgtc 37164254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 186 - 258
Target Start/End: Original strand, 39260517 - 39260589
Alignment:
Q  186 ttttctaatatattatttaagatatttaaactcaaaattatgtattgatatatgtaataaggtcaactgtgtc 258  Q
    ||||||||||||||||| |||||||||||| ||||||||||| ||||| ||  |||||||| |||| ||||||    
T  39260517 ttttctaatatattattcaagatatttaaattcaaaattatgcattgacatgcgtaataagatcaattgtgtc 39260589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 186 - 258
Target Start/End: Complemental strand, 47834042 - 47833970
Alignment:
Q  186 ttttctaatatattatttaagatatttaaactcaaaattatgtattgatatatgtaataaggtcaactgtgtc 258  Q
    |||| |||||||||||| ||||||||||| |||||||||||| ||||| ||  ||||||| ||||||||||||    
T  47834042 ttttataatatattattcaagatatttaagctcaaaattatgcattgacatgcgtaataaagtcaactgtgtc 47833970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 186 - 258
Target Start/End: Complemental strand, 55631773 - 55631701
Alignment:
Q  186 ttttctaatatattatttaagatatttaaactcaaaattatgtattgatatatgtaataaggtcaactgtgtc 258  Q
    ||||| ||||||||||| |||||||||||||||||||||| | |||| |||| |||||  |||||||||||||    
T  55631773 ttttccaatatattattcaagatatttaaactcaaaattacgcattggtatacgtaattgggtcaactgtgtc 55631701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 186 - 243
Target Start/End: Original strand, 6520600 - 6520657
Alignment:
Q  186 ttttctaatatattatttaagatatttaaactcaaaattatgtattgatatatgtaat 243  Q
    ||||||||||||||||| ||||||||||| |||||||||||| ||||| ||| |||||    
T  6520600 ttttctaatatattattcaagatatttaagctcaaaattatgcattgaaatacgtaat 6520657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 186 - 258
Target Start/End: Original strand, 1615704 - 1615776
Alignment:
Q  186 ttttctaatatattatttaagatatttaaactcaaaattatgtattgatatatgtaataaggtcaactgtgtc 258  Q
    ||||||||||||||||| ||||||||||| |||||| ||||| ||||| ||  |||||||||| || ||||||    
T  1615704 ttttctaatatattattcaagatatttaagctcaaagttatgcattgacatgcgtaataaggttaattgtgtc 1615776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 190 - 258
Target Start/End: Complemental strand, 2806065 - 2805997
Alignment:
Q  190 ctaatatattatttaagatatttaaactcaaaattatgtattgatatatgtaataaggtcaactgtgtc 258  Q
    ||||||||||||| |||||||||||  ||||| ||||| ||||| ||  ||||||||||||||||||||    
T  2806065 ctaatatattattcaagatatttaagttcaaagttatgcattgacatgcgtaataaggtcaactgtgtc 2805997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 186 - 258
Target Start/End: Complemental strand, 8525314 - 8525242
Alignment:
Q  186 ttttctaatatattatttaagatatttaaactcaaaattatgtattgatatatgtaataaggtcaactgtgtc 258  Q
    ||||||||||||||||| |||||||||||||||||||||| | |||| |||  |||||  ||||||| |||||    
T  8525314 ttttctaatatattattcaagatatttaaactcaaaattacgcattggtatgcgtaattgggtcaaccgtgtc 8525242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 186 - 258
Target Start/End: Original strand, 28914533 - 28914605
Alignment:
Q  186 ttttctaatatattatttaagatatttaaactcaaaattatgtattgatatatgtaataaggtcaactgtgtc 258  Q
    ||||| ||||||||||| |||||||||||||||||||||| | |||| |||  |||||  |||||||||||||    
T  28914533 ttttccaatatattattcaagatatttaaactcaaaattacgcattggtatgcgtaattgggtcaactgtgtc 28914605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 186 - 258
Target Start/End: Complemental strand, 37588428 - 37588356
Alignment:
Q  186 ttttctaatatattatttaagatatttaaactcaaaattatgtattgatatatgtaataaggtcaactgtgtc 258  Q
    ||||||||||||||||| ||||||||||| |||||||||||| ||||  ||  | |||||| |||||||||||    
T  37588428 ttttctaatatattattaaagatatttaagctcaaaattatgcattggcatgcgcaataagatcaactgtgtc 37588356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 186 - 258
Target Start/End: Original strand, 48380921 - 48380993
Alignment:
Q  186 ttttctaatatattatttaagatatttaaactcaaaattatgtattgatatatgtaataaggtcaactgtgtc 258  Q
    ||||| ||||||||||| |||||||||||||||||||||| | |||| |||  |||||  |||||||||||||    
T  48380921 ttttccaatatattattcaagatatttaaactcaaaattacgcattggtatgcgtaattgggtcaactgtgtc 48380993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 186 - 258
Target Start/End: Complemental strand, 51306132 - 51306060
Alignment:
Q  186 ttttctaatatattatttaagatatttaaactcaaaattatgtattgatatatgtaataaggtcaactgtgtc 258  Q
    |||||||| |||||||| |||||||||||||||||||||||| ||||| ||  |||||   ||||||||||||    
T  51306132 ttttctaacatattattcaagatatttaaactcaaaattatgcattgaaatgcgtaatggagtcaactgtgtc 51306060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 186 - 253
Target Start/End: Complemental strand, 54802956 - 54802889
Alignment:
Q  186 ttttctaatatattatttaagatatttaaactcaaaattatgtattgatatatgtaataaggtcaact 253  Q
    ||||||||||| ||||||| ||||||||| |||||||||||| ||| | ||  |||||||||||||||    
T  54802956 ttttctaatatgttatttacgatatttaacctcaaaattatgcattaacatgcgtaataaggtcaact 54802889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 187 - 233
Target Start/End: Complemental strand, 1981278 - 1981232
Alignment:
Q  187 tttctaatatattatttaagatatttaaactcaaaattatgtattga 233  Q
    ||||||| |||||||| |||||||||||||||||||||||| |||||    
T  1981278 tttctaacatattattcaagatatttaaactcaaaattatgcattga 1981232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 192 - 258
Target Start/End: Complemental strand, 39332722 - 39332656
Alignment:
Q  192 aatatattatttaagatatttaaactcaaaattatgtattgatatatgtaataaggtcaactgtgtc 258  Q
    ||||||||||| |||||||||||||||||||||| | |||| |||  |||||  |||||||||||||    
T  39332722 aatatattattcaagatatttaaactcaaaattacgcattggtatgcgtaattgggtcaactgtgtc 39332656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 186 - 255
Target Start/End: Original strand, 39171123 - 39171192
Alignment:
Q  186 ttttctaatatattatttaagatatttaaactcaaaattatgtattgatatatgtaataaggtcaactgt 255  Q
    ||||| ||||||||||| |||||||||||||||||||| | | |||| |||  ||||| |||||||||||    
T  39171123 ttttccaatatattattcaagatatttaaactcaaaatcacgcattggtatgcgtaattaggtcaactgt 39171192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 186 - 255
Target Start/End: Original strand, 42185439 - 42185508
Alignment:
Q  186 ttttctaatatattatttaagatatttaaactcaaaattatgtattgatatatgtaataaggtcaactgt 255  Q
    |||| ||| |||||||||||||||||||| |||||||||||| |||   ||| |||||| ||||||||||    
T  42185439 ttttataacatattatttaagatatttaagctcaaaattatgcatttgaataggtaatatggtcaactgt 42185508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 186 - 227
Target Start/End: Complemental strand, 52818588 - 52818547
Alignment:
Q  186 ttttctaatatattatttaagatatttaaactcaaaattatg 227  Q
    ||||||||||||||||| ||||||||||| ||||||||||||    
T  52818588 ttttctaatatattattcaagatatttaagctcaaaattatg 52818547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 186 - 258
Target Start/End: Original strand, 3708418 - 3708490
Alignment:
Q  186 ttttctaatatattatttaagatatttaaactcaaaattatgtattgatatatgtaataaggtcaactgtgtc 258  Q
    ||||| ||||||||||| |||||||||||||||||||||| | |||| |||  |||||  ||| |||||||||    
T  3708418 ttttccaatatattattcaagatatttaaactcaaaattacgcattggtatgcgtaattgggttaactgtgtc 3708490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 186 - 258
Target Start/End: Original strand, 43447330 - 43447402
Alignment:
Q  186 ttttctaatatattatttaagatatttaaactcaaaattatgtattgatatatgtaataaggtcaactgtgtc 258  Q
    ||||| ||||||||||| |||||||||||||||||||||| | |||| |||  ||||   |||||||||||||    
T  43447330 ttttccaatatattattcaagatatttaaactcaaaattacgcattggtatgcgtaaatgggtcaactgtgtc 43447402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 186 - 258
Target Start/End: Original strand, 50685085 - 50685157
Alignment:
Q  186 ttttctaatatattatttaagatatttaaactcaaaattatgtattgatatatgtaataaggtcaactgtgtc 258  Q
    ||||||||||||||||| || ||||||||  ||||||||||  |||| |||  |||||| |||||||||||||    
T  50685085 ttttctaatatattattcaaaatatttaagttcaaaattatacattggtatgcgtaatagggtcaactgtgtc 50685157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 186 - 225
Target Start/End: Original strand, 10385013 - 10385052
Alignment:
Q  186 ttttctaatatattatttaagatatttaaactcaaaatta 225  Q
    ||||| ||||||||||| ||||||||||||||||||||||    
T  10385013 ttttccaatatattattcaagatatttaaactcaaaatta 10385052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 191 - 258
Target Start/End: Original strand, 11260872 - 11260939
Alignment:
Q  191 taatatattatttaagatatttaaactcaaaattatgtattgatatatgtaataaggtcaactgtgtc 258  Q
    |||||||||||| ||||||||||| | |||||||||| ||||| ||  |||||||| |||| ||||||    
T  11260872 taatatattattcaagatatttaagcacaaaattatgcattgacatgcgtaataagatcaattgtgtc 11260939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 186 - 233
Target Start/End: Complemental strand, 31657255 - 31657208
Alignment:
Q  186 ttttctaatatattatttaagatatttaaactcaaaattatgtattga 233  Q
    |||||||| |||||||| ||||||||||| |||||||||||| |||||    
T  31657255 ttttctaacatattattcaagatatttaagctcaaaattatgcattga 31657208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 186 - 225
Target Start/End: Complemental strand, 40411506 - 40411467
Alignment:
Q  186 ttttctaatatattatttaagatatttaaactcaaaatta 225  Q
    ||||| ||||||||||| ||||||||||||||||||||||    
T  40411506 ttttccaatatattattcaagatatttaaactcaaaatta 40411467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 186 - 253
Target Start/End: Complemental strand, 42862191 - 42862124
Alignment:
Q  186 ttttctaatatattatttaagatatttaaactcaaaattatgtattgatatatgtaataaggtcaact 253  Q
    ||||||||||||||||| |||||||||||| | ||||||||  ||| |||||||| |||  |||||||    
T  42862191 ttttctaatatattattaaagatatttaaatttaaaattatccattaatatatgtgatatagtcaact 42862124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 186 - 233
Target Start/End: Original strand, 44210314 - 44210361
Alignment:
Q  186 ttttctaatatattatttaagatatttaaactcaaaattatgtattga 233  Q
    |||||||| |||||||| ||||||||||| |||||||||||| |||||    
T  44210314 ttttctaacatattattcaagatatttaagctcaaaattatgcattga 44210361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 186 - 232
Target Start/End: Original strand, 1377973 - 1378019
Alignment:
Q  186 ttttctaatatattatttaagatatttaaactcaaaattatgtattg 232  Q
    |||||||| |||||||| ||||||||||| |||||||||||| ||||    
T  1377973 ttttctaacatattattcaagatatttaagctcaaaattatgcattg 1378019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 186 - 232
Target Start/End: Complemental strand, 28898969 - 28898923
Alignment:
Q  186 ttttctaatatattatttaagatatttaaactcaaaattatgtattg 232  Q
    |||||||| |||||||| ||||||||||| |||||||||||| ||||    
T  28898969 ttttctaacatattattcaagatatttaagctcaaaattatgcattg 28898923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 186 - 232
Target Start/End: Complemental strand, 28988292 - 28988246
Alignment:
Q  186 ttttctaatatattatttaagatatttaaactcaaaattatgtattg 232  Q
    |||||||| |||||||| ||||||||||| |||||||||||| ||||    
T  28988292 ttttctaacatattattcaagatatttaagctcaaaattatgcattg 28988246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 186 - 224
Target Start/End: Complemental strand, 37667672 - 37667634
Alignment:
Q  186 ttttctaatatattatttaagatatttaaactcaaaatt 224  Q
    ||||| ||||||||||| |||||||||||||||||||||    
T  37667672 ttttccaatatattattcaagatatttaaactcaaaatt 37667634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 192 - 258
Target Start/End: Original strand, 48652643 - 48652709
Alignment:
Q  192 aatatattatttaagatatttaaactcaaaattatgtattgatatatgtaataaggtcaactgtgtc 258  Q
    ||||||||||| ||||||||||||||||||||||   |||| |||  |||||  |||||||||||||    
T  48652643 aatatattattcaagatatttaaactcaaaattacacattggtatccgtaattgggtcaactgtgtc 48652709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 193 - 258
Target Start/End: Complemental strand, 4271905 - 4271840
Alignment:
Q  193 atatattatttaagatatttaaactcaaaattatgtattgatatatgtaataaggtcaactgtgtc 258  Q
    |||||| ||| ||||||||||| |||||| ||||| ||||  ||  ||||||||||||||||||||    
T  4271905 atatataattcaagatatttaagctcaaagttatgcattggcatgcgtaataaggtcaactgtgtc 4271840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 192 - 225
Target Start/End: Original strand, 43047558 - 43047591
Alignment:
Q  192 aatatattatttaagatatttaaactcaaaatta 225  Q
    ||||||||||| ||||||||||||||||||||||    
T  43047558 aatatattattcaagatatttaaactcaaaatta 43047591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 186 - 258
Target Start/End: Original strand, 46608378 - 46608451
Alignment:
Q  186 ttttctaatata-ttatttaagatatttaaactcaaaattatgtattgatatatgtaataaggtcaactgtgtc 258  Q
    ||||| |||||| ||||| |||||||||||||||||||||| | |||| |||  |||||  |||||||||||||    
T  46608378 ttttccaatatacttattcaagatatttaaactcaaaattacgcattggtatgcgtaattgggtcaactgtgtc 46608451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 186 - 258
Target Start/End: Complemental strand, 24334276 - 24334204
Alignment:
Q  186 ttttctaatatattatttaagatatttaaactcaaaattatgtattgatatatgtaataaggtcaactgtgtc 258  Q
    |||||||| |||||||| ||||||| ||| |||||||||||| ||||| ||  |||||   ||||||||||||    
T  24334276 ttttctaacatattattcaagatatgtaagctcaaaattatgcattgaaatgcgtaatggagtcaactgtgtc 24334204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 186 - 258
Target Start/End: Original strand, 29424811 - 29424883
Alignment:
Q  186 ttttctaatatattatttaagatatttaaactcaaaattatgtattgatatatgtaataaggtcaactgtgtc 258  Q
    ||||||||||||||||| |  || ||||| |||||||||||  ||| | |||| ||||| |||||||||||||    
T  29424811 ttttctaatatattattcagaatgtttaagctcaaaattatacattaacatatataatatggtcaactgtgtc 29424883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 190 - 258
Target Start/End: Complemental strand, 48079942 - 48079874
Alignment:
Q  190 ctaatatattatttaagatatttaaactcaaaattatgtattgatatatgtaataaggtcaactgtgtc 258  Q
    ||||||||||||| ||||||||||| |||||| ||||  ||||| ||  |||||||| |||| ||||||    
T  48079942 ctaatatattattgaagatatttaagctcaaagttatacattgacatgcgtaataagatcaaatgtgtc 48079874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 186 - 258
Target Start/End: Original strand, 51716696 - 51716768
Alignment:
Q  186 ttttctaatatattatttaagatatttaaactcaaaattatgtattgatatatgtaataaggtcaactgtgtc 258  Q
    |||| |||||||||||| || |||||||| |||||||||||| ||||| ||   ||||||| |||||| ||||    
T  51716696 ttttataatatattattcaaaatatttaagctcaaaattatgcattgacatgcataataagctcaactatgtc 51716768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0172 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0172
Description:

Target: scaffold0172; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 190 - 258
Target Start/End: Complemental strand, 19630 - 19562
Alignment:
Q  190 ctaatatattatttaagatatttaaactcaaaattatgtattgatatatgtaataaggtcaactgtgtc 258  Q
    ||||||||||||| ||||||||||| |||||||||||| ||||| ||  ||||||||||||||||||||    
T  19630 ctaatatattattcaagatatttaagctcaaaattatgcattgacattcgtaataaggtcaactgtgtc 19562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 45; Significance: 1e-16; HSPs: 49)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 186 - 253
Target Start/End: Original strand, 8627300 - 8627368
Alignment:
Q  186 ttttctaatatattatttaagatatttaaactc-aaaattatgtattgatatatgtaataaggtcaact 253  Q
    ||||||||||||||||| ||||||||||||||| ||||||||| |||||||| ||||||||| ||||||    
T  8627300 ttttctaatatattattcaagatatttaaactcaaaaattatgcattgatatgtgtaataagatcaact 8627368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 186 - 255
Target Start/End: Complemental strand, 1918729 - 1918660
Alignment:
Q  186 ttttctaatatattatttaagatatttaaactcaaaattatgtattgatatatgtaataaggtcaactgt 255  Q
    ||||||||||||||||| |||||||||||  ||||||||||| ||||  || ||||||||||||||||||    
T  1918729 ttttctaatatattattcaagatatttaaggtcaaaattatgcattggcatgtgtaataaggtcaactgt 1918660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 186 - 255
Target Start/End: Complemental strand, 14639614 - 14639545
Alignment:
Q  186 ttttctaatatattatttaagatatttaaactcaaaattatgtattgatatatgtaataaggtcaactgt 255  Q
    ||||||||||||||||| ||||||||||| |||||| ||||| ||||| ||| |||||||| ||||||||    
T  14639614 ttttctaatatattattcaagatatttaagctcaaagttatgcattgacatacgtaataagatcaactgt 14639545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 186 - 238
Target Start/End: Complemental strand, 2551526 - 2551474
Alignment:
Q  186 ttttctaatatattatttaagatatttaaactcaaaattatgtattgatatat 238  Q
    |||| |||||||||||| |||||||||||||||||||||||| ||||||||||    
T  2551526 ttttttaatatattattcaagatatttaaactcaaaattatgcattgatatat 2551474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 186 - 258
Target Start/End: Complemental strand, 9936787 - 9936715
Alignment:
Q  186 ttttctaatatattatttaagatatttaaactcaaaattatgtattgatatatgtaataaggtcaactgtgtc 258  Q
    ||||| ||||||||||| |||||||||||||||||||||| | ||||||||  |||||  |||||||||||||    
T  9936787 ttttccaatatattattcaagatatttaaactcaaaattacgcattgatatgcgtaattgggtcaactgtgtc 9936715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 186 - 258
Target Start/End: Original strand, 14633172 - 14633244
Alignment:
Q  186 ttttctaatatattatttaagatatttaaactcaaaattatgtattgatatatgtaataaggtcaactgtgtc 258  Q
    ||||| ||||||||||| |||||||||||||||||||||| | |||| |||  ||||| ||||||||||||||    
T  14633172 ttttccaatatattattcaagatatttaaactcaaaattacgcattggtatgcgtaattaggtcaactgtgtc 14633244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 186 - 258
Target Start/End: Complemental strand, 26802000 - 26801928
Alignment:
Q  186 ttttctaatatattatttaagatatttaaactcaaaattatgtattgatatatgtaataaggtcaactgtgtc 258  Q
    ||||||||||||||||| |||||||||||  ||||| ||||| ||||| ||  ||||||||||||||||||||    
T  26802000 ttttctaatatattattcaagatatttaagttcaaagttatgcattgacatgcgtaataaggtcaactgtgtc 26801928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 186 - 258
Target Start/End: Complemental strand, 26809550 - 26809478
Alignment:
Q  186 ttttctaatatattatttaagatatttaaactcaaaattatgtattgatatatgtaataaggtcaactgtgtc 258  Q
    ||||||||||||||||| |||||||||||  ||||| ||||| ||||| ||  ||||||||||||||||||||    
T  26809550 ttttctaatatattattcaagatatttaagttcaaagttatgcattgacatgcgtaataaggtcaactgtgtc 26809478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 186 - 258
Target Start/End: Complemental strand, 41410559 - 41410487
Alignment:
Q  186 ttttctaatatattatttaagatatttaaactcaaaattatgtattgatatatgtaataaggtcaactgtgtc 258  Q
    |||| |||||||||||| |||||||||||||||||||||| | |||| |||| |||||  |||||||||||||    
T  41410559 ttttttaatatattattcaagatatttaaactcaaaattacgcattggtatacgtaattgggtcaactgtgtc 41410487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 186 - 255
Target Start/End: Original strand, 6734947 - 6735016
Alignment:
Q  186 ttttctaatatattatttaagatatttaaactcaaaattatgtattgatatatgtaataaggtcaactgt 255  Q
    |||| |||||||||||| ||||||||||| |||||||||||  |||||| || |||||| ||||||||||    
T  6734947 ttttttaatatattattcaagatatttaagctcaaaattatacattgatgtacgtaatagggtcaactgt 6735016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 186 - 255
Target Start/End: Original strand, 30788370 - 30788439
Alignment:
Q  186 ttttctaatatattatttaagatatttaaactcaaaattatgtattgatatatgtaataaggtcaactgt 255  Q
    |||| |||||||||||| ||||||||||| |||||||||||| ||||| ||  || ||||||||||||||    
T  30788370 ttttttaatatattattcaagatatttaagctcaaaattatgcattgacatgcgttataaggtcaactgt 30788439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 186 - 258
Target Start/End: Original strand, 1831515 - 1831587
Alignment:
Q  186 ttttctaatatattatttaagatatttaaactcaaaattatgtattgatatatgtaataaggtcaactgtgtc 258  Q
    |||| |||||||||||| |||||||||||||||||||||| | |||| |||  |||||  |||||||||||||    
T  1831515 ttttttaatatattattcaagatatttaaactcaaaattacgcattggtatgcgtaattgggtcaactgtgtc 1831587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 186 - 258
Target Start/End: Original strand, 2799797 - 2799869
Alignment:
Q  186 ttttctaatatattatttaagatatttaaactcaaaattatgtattgatatatgtaataaggtcaactgtgtc 258  Q
    ||||||||||| ||||| |||||||||||||||||| ||||  ||||| ||  ||||||| ||||||||||||    
T  2799797 ttttctaatattttattcaagatatttaaactcaaagttatacattgacatgcgtaataaagtcaactgtgtc 2799869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 186 - 258
Target Start/End: Original strand, 2805963 - 2806035
Alignment:
Q  186 ttttctaatatattatttaagatatttaaactcaaaattatgtattgatatatgtaataaggtcaactgtgtc 258  Q
    ||||||||||| ||||| |||||||||||||||||| ||||  ||||| ||  ||||||| ||||||||||||    
T  2805963 ttttctaatattttattcaagatatttaaactcaaagttatacattgacatgcgtaataaagtcaactgtgtc 2806035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 192 - 236
Target Start/End: Original strand, 13548384 - 13548428
Alignment:
Q  192 aatatattatttaagatatttaaactcaaaattatgtattgatat 236  Q
    ||||||||||| |||||||||||||||||||||| ||||||||||    
T  13548384 aatatattattcaagatatttaaactcaaaattacgtattgatat 13548428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 186 - 258
Target Start/End: Original strand, 20023025 - 20023097
Alignment:
Q  186 ttttctaatatattatttaagatatttaaactcaaaattatgtattgatatatgtaataaggtcaactgtgtc 258  Q
    ||||| ||||||||||| |||||||||||||||||||||| | |||| |||  |||||  |||||||||||||    
T  20023025 ttttccaatatattattcaagatatttaaactcaaaattacgcattggtatgcgtaattgggtcaactgtgtc 20023097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 190 - 258
Target Start/End: Complemental strand, 26824573 - 26824505
Alignment:
Q  190 ctaatatattatttaagatatttaaactcaaaattatgtattgatatatgtaataaggtcaactgtgtc 258  Q
    ||||||||||||| |||||||||||  ||||| ||||| ||||| ||  ||||||||||||||||||||    
T  26824573 ctaatatattattcaagatatttaagttcaaagttatgcattgacatgcgtaataaggtcaactgtgtc 26824505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 190 - 258
Target Start/End: Original strand, 27674386 - 27674454
Alignment:
Q  190 ctaatatattatttaagatatttaaactcaaaattatgtattgatatatgtaataaggtcaactgtgtc 258  Q
    |||||| |||||| ||||||||||| |||||| ||||| ||||| ||  ||||||||||||||||||||    
T  27674386 ctaatacattattcaagatatttaagctcaaagttatgcattgacatgcgtaataaggtcaactgtgtc 27674454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 186 - 258
Target Start/End: Original strand, 27675705 - 27675777
Alignment:
Q  186 ttttctaatatattatttaagatatttaaactcaaaattatgtattgatatatgtaataaggtcaactgtgtc 258  Q
    |||||||| |||||||||||||||||||| |||||||||||| ||||| ||  |||||   ||||||||||||    
T  27675705 ttttctaacatattatttaagatatttaagctcaaaattatgcattgaaatgcgtaatggagtcaactgtgtc 27675777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 186 - 258
Target Start/End: Original strand, 39035725 - 39035797
Alignment:
Q  186 ttttctaatatattatttaagatatttaaactcaaaattatgtattgatatatgtaataaggtcaactgtgtc 258  Q
    |||| |||||||||||| ||||||||||| |||||||||||  ||||| ||| ||| ||||||| ||||||||    
T  39035725 ttttataatatattattcaagatatttaagctcaaaattattcattgacatacgtagtaaggtcgactgtgtc 39035797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 186 - 258
Target Start/End: Original strand, 39925369 - 39925441
Alignment:
Q  186 ttttctaatatattatttaagatatttaaactcaaaattatgtattgatatatgtaataaggtcaactgtgtc 258  Q
    ||||| || |||||||| |||||||||||||||||||||||| ||||| ||| |||||| ||| |||| ||||    
T  39925369 ttttccaacatattattcaagatatttaaactcaaaattatgcattgacatacgtaatagggttaactttgtc 39925441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 186 - 258
Target Start/End: Original strand, 40316982 - 40317054
Alignment:
Q  186 ttttctaatatattatttaagatatttaaactcaaaattatgtattgatatatgtaataaggtcaactgtgtc 258  Q
    |||| |||||||||||| |||||||||||||||||||||| | |||| |||  |||||  |||||||||||||    
T  40316982 ttttttaatatattattcaagatatttaaactcaaaattacgcattggtatgcgtaattgggtcaactgtgtc 40317054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 186 - 253
Target Start/End: Complemental strand, 39104178 - 39104111
Alignment:
Q  186 ttttctaatatattatttaagatatttaaactcaaaattatgtattgatatatgtaataaggtcaact 253  Q
    ||||||||||||||||| || |||||||| |||||||||||| ||||  ||  |||||||||||||||    
T  39104178 ttttctaatatattattcaatatatttaagctcaaaattatgcattggcatgcgtaataaggtcaact 39104111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 186 - 232
Target Start/End: Original strand, 14140083 - 14140129
Alignment:
Q  186 ttttctaatatattatttaagatatttaaactcaaaattatgtattg 232  Q
    |||||||| |||||||| |||||||||||||||||||||||| ||||    
T  14140083 ttttctaacatattattcaagatatttaaactcaaaattatgcattg 14140129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 184 - 258
Target Start/End: Complemental strand, 20040316 - 20040242
Alignment:
Q  184 tcttttctaatatattatttaagatatttaaactcaaaattatgtattgatatatgtaataaggtcaactgtgtc 258  Q
    ||||||| ||||||||||| |||||||||||| ||||||||| | |||| |||  |||||  |||||||||||||    
T  20040316 tcttttccaatatattattcaagatatttaaattcaaaattacgcattggtatgcgtaattgggtcaactgtgtc 20040242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 186 - 240
Target Start/End: Original strand, 21031799 - 21031853
Alignment:
Q  186 ttttctaatatattatttaagatatttaaactcaaaattatgtattgatatatgt 240  Q
    ||||||||||||||||| |||||||||||  |||||||| ||| |||||||||||    
T  21031799 ttttctaatatattattaaagatatttaagatcaaaattgtgtcttgatatatgt 21031853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 186 - 258
Target Start/End: Complemental strand, 1781044 - 1780972
Alignment:
Q  186 ttttctaatatattatttaagatatttaaactcaaaattatgtattgatatatgtaataaggtcaactgtgtc 258  Q
    ||||| ||||||||| | |||||||||||||||||||||| | |||| |||  |||||  |||||||||||||    
T  1781044 ttttccaatatattactcaagatatttaaactcaaaattacgcattggtatgagtaattgggtcaactgtgtc 1780972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 190 - 254
Target Start/End: Original strand, 1831233 - 1831297
Alignment:
Q  190 ctaatatattatttaagatatttaaactcaaaattatgtattgatatatgtaataaggtcaactg 254  Q
    ||||||||||||| ||||||||||| |||||| ||||| ||||| ||  ||||||| ||||||||    
T  1831233 ctaatatattattcaagatatttaagctcaaagttatgcattgacatgcgtaataaagtcaactg 1831297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 186 - 226
Target Start/End: Original strand, 14355664 - 14355704
Alignment:
Q  186 ttttctaatatattatttaagatatttaaactcaaaattat 226  Q
    |||| |||||||||||||||||||||||| |||||||||||    
T  14355664 ttttataatatattatttaagatatttaagctcaaaattat 14355704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 186 - 258
Target Start/End: Complemental strand, 30721584 - 30721512
Alignment:
Q  186 ttttctaatatattatttaagatatttaaactcaaaattatgtattgatatatgtaataaggtcaactgtgtc 258  Q
    ||||| ||||||||||| |||||||||||||||||| ||| | |||| |||  |||||  |||||||||||||    
T  30721584 ttttccaatatattattcaagatatttaaactcaaatttacgcattggtatgcgtaattgggtcaactgtgtc 30721512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 186 - 258
Target Start/End: Complemental strand, 32110541 - 32110469
Alignment:
Q  186 ttttctaatatattatttaagatatttaaactcaaaattatgtattgatatatgtaataaggtcaactgtgtc 258  Q
    ||||||||||||||||| |||||||| || |||||| ||||| ||||| ||  ||||||| ||||||| ||||    
T  32110541 ttttctaatatattattcaagatattgaagctcaaagttatgcattgagatgcgtaataatgtcaactctgtc 32110469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 190 - 254
Target Start/End: Original strand, 40316700 - 40316764
Alignment:
Q  190 ctaatatattatttaagatatttaaactcaaaattatgtattgatatatgtaataaggtcaactg 254  Q
    ||||||||||||| ||||||||||| |||||| ||||| ||||| ||  ||||||| ||||||||    
T  40316700 ctaatatattattcaagatatttaagctcaaagttatgcattgacatgcgtaataaagtcaactg 40316764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 190 - 258
Target Start/End: Complemental strand, 40796967 - 40796899
Alignment:
Q  190 ctaatatattatttaagatatttaaactcaaaattatgtattgatatatgtaataaggtcaactgtgtc 258  Q
    ||||||||||||| ||| |||||||  ||||| ||||| ||||| ||  ||||||||||||||||||||    
T  40796967 ctaatatattattcaaggtatttaagttcaaagttatgcattgacatgcgtaataaggtcaactgtgtc 40796899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 190 - 254
Target Start/End: Complemental strand, 41410841 - 41410777
Alignment:
Q  190 ctaatatattatttaagatatttaaactcaaaattatgtattgatatatgtaataaggtcaactg 254  Q
    ||||||||||||| ||||||||||| |||||| ||||| ||||| ||  ||||||| ||||||||    
T  41410841 ctaatatattattcaagatatttaagctcaaagttatgcattgacatgcgtaataaagtcaactg 41410777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 186 - 233
Target Start/End: Complemental strand, 10465194 - 10465147
Alignment:
Q  186 ttttctaatatattatttaagatatttaaactcaaaattatgtattga 233  Q
    |||||||| |||||||| ||||||||||| |||||||||||| |||||    
T  10465194 ttttctaacatattattcaagatatttaagctcaaaattatgcattga 10465147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 186 - 225
Target Start/End: Original strand, 14057873 - 14057912
Alignment:
Q  186 ttttctaatatattatttaagatatttaaactcaaaatta 225  Q
    ||||| ||||||||||| ||||||||||||||||||||||    
T  14057873 ttttccaatatattattcaagatatttaaactcaaaatta 14057912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 186 - 225
Target Start/End: Complemental strand, 30211640 - 30211601
Alignment:
Q  186 ttttctaatatattatttaagatatttaaactcaaaatta 225  Q
    ||||| ||||||||||| ||||||||||||||||||||||    
T  30211640 ttttccaatatattattcaagatatttaaactcaaaatta 30211601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 186 - 253
Target Start/End: Complemental strand, 30351970 - 30351903
Alignment:
Q  186 ttttctaatatattatttaagatatttaaactcaaaattatgtattgatatatgtaataaggtcaact 253  Q
    ||||| |||||||| || |||||||||||||||||||||| | |||| |||| |||||  ||||||||    
T  30351970 ttttccaatatattgttcaagatatttaaactcaaaattacgcattggtatacgtaatttggtcaact 30351903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 186 - 256
Target Start/End: Original strand, 967359 - 967429
Alignment:
Q  186 ttttctaatatattatttaagatatttaaactcaaaattatgtattgatatatgtaataaggtcaactgtg 256  Q
    ||||||||  ||||||| |||||||||||  ||||||||||| |||| |||  ||||||| ||||||||||    
T  967359 ttttctaacttattattcaagatatttaagttcaaaattatgcattggtatgcgtaataaagtcaactgtg 967429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 192 - 258
Target Start/End: Complemental strand, 14607451 - 14607385
Alignment:
Q  192 aatatattatttaagatatttaaactcaaaattatgtattgatatatgtaataaggtcaactgtgtc 258  Q
    ||||||||||| |||||||||||||||||||||| | |||  |||  |||||  |||||||||||||    
T  14607451 aatatattattcaagatatttaaactcaaaattacgcattagtatgcgtaattgggtcaactgtgtc 14607385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 192 - 258
Target Start/End: Complemental strand, 33402484 - 33402418
Alignment:
Q  192 aatatattatttaagatatttaaactcaaaattatgtattgatatatgtaataaggtcaactgtgtc 258  Q
    ||||||||||| ||||||||||||||||||||||   ||||||||  |||||  |||| ||||||||    
T  33402484 aatatattattcaagatatttaaactcaaaattacacattgatatgcgtaattgggtctactgtgtc 33402418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 192 - 225
Target Start/End: Original strand, 1098346 - 1098379
Alignment:
Q  192 aatatattatttaagatatttaaactcaaaatta 225  Q
    ||||||||||| ||||||||||||||||||||||    
T  1098346 aatatattattcaagatatttaaactcaaaatta 1098379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 193 - 258
Target Start/End: Complemental strand, 19344591 - 19344526
Alignment:
Q  193 atatattatttaagatatttaaactcaaaattatgtattgatatatgtaataaggtcaactgtgtc 258  Q
    |||||||||| || ||||||||||||||||||| | |||| |||  |||||  |||||||||||||    
T  19344591 atatattattcaaaatatttaaactcaaaattacgcattggtatgcgtaattgggtcaactgtgtc 19344526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 186 - 255
Target Start/End: Complemental strand, 31191076 - 31191007
Alignment:
Q  186 ttttctaatatattatttaagatatttaaactcaaaattatgtattgatatatgtaataaggtcaactgt 255  Q
    ||||| |||| |||||| |||||||||||||||||||||| | |||| |||  |||||  ||||||||||    
T  31191076 ttttccaatacattattcaagatatttaaactcaaaattacgcattggtatgcgtaattgggtcaactgt 31191007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 186 - 243
Target Start/End: Complemental strand, 41042736 - 41042679
Alignment:
Q  186 ttttctaatatattatttaagatatttaaactcaaaattatgtattgatatatgtaat 243  Q
    |||||||| |||||||| || |||||||| |||||||||||| ||||| ||| |||||    
T  41042736 ttttctaacatattattcaatatatttaagctcaaaattatgcattgaaatacgtaat 41042679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 186 - 258
Target Start/End: Complemental strand, 20502947 - 20502875
Alignment:
Q  186 ttttctaatatattatttaagatatttaaactcaaaattatgtattgatatatgtaataaggtcaactgtgtc 258  Q
    |||| |||||||||| |||| ||||||||  ||||||| ||| ||||| | | |||||| |||||||||||||    
T  20502947 ttttttaatatattacttaacatatttaagttcaaaataatgcattgacaaacgtaatagggtcaactgtgtc 20502875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 186 - 226
Target Start/End: Original strand, 40080146 - 40080186
Alignment:
Q  186 ttttctaatatattatttaagatatttaaactcaaaattat 226  Q
    |||||||| |||||||| ||||||||||| |||||||||||    
T  40080146 ttttctaacatattattcaagatatttaagctcaaaattat 40080186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 190 - 254
Target Start/End: Complemental strand, 40365783 - 40365719
Alignment:
Q  190 ctaatatattatttaagatatttaaactcaaaattatgtattgatatatgtaataaggtcaactg 254  Q
    ||||||||||||| || ||||||||  ||||| ||||| ||||| ||  ||||||||||||||||    
T  40365783 ctaatatattattcaaaatatttaagttcaaagttatgcattgacatgcgtaataaggtcaactg 40365719  T

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Target: chr5; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 186 - 258
Target Start/End: Complemental strand, 41263028 - 41262956
Alignment:
Q  186 ttttctaatatattatttaagatatttaaactcaaaattatgtattgatatatgtaataaggtcaactgtgtc 258  Q
    ||||| ||||||||||| |||||||||||||||||| ||| | |||| |||  |||||  |||||| ||||||    
T  41263028 ttttccaatatattattcaagatatttaaactcaaatttacgcattggtatgcgtaattgggtcaattgtgtc 41262956  T

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Target: scaffold0500 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0500
Description:

Target: scaffold0500; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 197 - 258
Target Start/End: Complemental strand, 565 - 504
Alignment:
Q  197 attatttaagatatttaaactcaaaattatgtattgatatatgtaataaggtcaactgtgtc 258  Q
    |||||| ||||||||||| |||||||||||| ||||| ||| |||||| |||||||||||||    
T  565 attattcaagatatttaagctcaaaattatgcattgacatacgtaatagggtcaactgtgtc 504  T

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Target: scaffold0289 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0289
Description:

Target: scaffold0289; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 186 - 255
Target Start/End: Original strand, 9288 - 9357
Alignment:
Q  186 ttttctaatatattatttaagatatttaaactcaaaattatgtattgatatatgtaataaggtcaactgt 255  Q
    ||||||||||||||||| |||||||||||||| |||  |||  ||||||||  |||||||||||||||||    
T  9288 ttttctaatatattattcaagatatttaaactaaaagctatacattgatatgcgtaataaggtcaactgt 9357  T

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Target: scaffold0221 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0221
Description:

Target: scaffold0221; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 186 - 258
Target Start/End: Original strand, 5541 - 5613
Alignment:
Q  186 ttttctaatatattatttaagatatttaaactcaaaattatgtattgatatatgtaataaggtcaactgtgtc 258  Q
    ||||| ||||||||||| |||||||||||||||||||||| | |||| |||  |||||  |||||||||||||    
T  5541 ttttccaatatattattcaagatatttaaactcaaaattacgcattggtatgcgtaattgggtcaactgtgtc 5613  T

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Target: scaffold0001 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 186 - 255
Target Start/End: Original strand, 184131 - 184200
Alignment:
Q  186 ttttctaatatattatttaagatatttaaactcaaaattatgtattgatatatgtaataaggtcaactgt 255  Q
    ||||| ||||||||||| |||||||||||||||||||||| | |||| |||  |||||  ||||||||||    
T  184131 ttttccaatatattattcaagatatttaaactcaaaattacgcattggtatgcgtaattgggtcaactgt 184200  T

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Target: scaffold0195 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0195
Description:

Target: scaffold0195; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 190 - 258
Target Start/End: Complemental strand, 140 - 72
Alignment:
Q  190 ctaatatattatttaagatatttaaactcaaaattatgtattgatatatgtaataaggtcaactgtgtc 258  Q
    ||||||||||||| ||||||||||| |||||| ||||  ||||  ||  ||||||||||||||||||||    
T  140 ctaatatattattcaagatatttaatctcaaagttatacattggcatgcgtaataaggtcaactgtgtc 72  T

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Target: scaffold1248 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold1248
Description:

Target: scaffold1248; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 186 - 236
Target Start/End: Complemental strand, 1355 - 1305
Alignment:
Q  186 ttttctaatatattatttaagatatttaaactcaaaattatgtattgatat 236  Q
    ||||||||||||||||| | ||||||||| || ||||||||| ||||||||    
T  1355 ttttctaatatattattcaggatatttaagcttaaaattatgcattgatat 1305  T

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Target: scaffold0952 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0952
Description:

Target: scaffold0952; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 186 - 236
Target Start/End: Original strand, 958 - 1008
Alignment:
Q  186 ttttctaatatattatttaagatatttaaactcaaaattatgtattgatat 236  Q
    ||||||||||||||||| | ||||||||| || ||||||||| ||||||||    
T  958 ttttctaatatattattcaggatatttaagcttaaaattatgcattgatat 1008  T

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Target: scaffold0281 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0281
Description:

Target: scaffold0281; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 186 - 232
Target Start/End: Original strand, 13270 - 13316
Alignment:
Q  186 ttttctaatatattatttaagatatttaaactcaaaattatgtattg 232  Q
    |||||||| |||||||| |||||||||||  ||||||||||||||||    
T  13270 ttttctaacatattattcaagatatttaaggtcaaaattatgtattg 13316  T

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Target: scaffold0283 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0283
Description:

Target: scaffold0283; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 201 - 258
Target Start/End: Original strand, 3163 - 3220
Alignment:
Q  201 tttaagatatttaaactcaaaattatgtattgatatatgtaataaggtcaactgtgtc 258  Q
    ||||| |||||||| |||||||||||| |||| |||  |||||| |||||||||||||    
T  3163 tttaatatatttaagctcaaaattatgcattggtatgcgtaatatggtcaactgtgtc 3220  T

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Target: scaffold0385 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0385
Description:

Target: scaffold0385; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 186 - 258
Target Start/End: Complemental strand, 2119 - 2047
Alignment:
Q  186 ttttctaatatattatttaagatatttaaactcaaaattatgtattgatatatgtaataaggtcaactgtgtc 258  Q
    |||||| |||||||||| |||||||||||  ||||||||||| ||| | | | |||||| | |||||||||||    
T  2119 ttttctgatatattattcaagatatttaagttcaaaattatgcattaacagacgtaatatgttcaactgtgtc 2047  T

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