View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF3342_high_50 (Length: 293)
Name: NF3342_high_50
Description: NF3342
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3342_high_50 |
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Alignment Details
Target: chr2 (Bit Score: 83; Significance: 2e-39; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 13 - 107
Target Start/End: Complemental strand, 15106618 - 15106524
Alignment:
| Q |
13 |
aatatgtgcaatagcttagtatcagtttggttaaagttgattgaaaagaagtttacaaaactaaaatttcaaatttcctacactccatccaaatg |
107 |
Q |
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| T |
15106618 |
aatatgtgcaatagcttagtatcagtttggttaaaactgattgaaaagaagtttacaaaactaaaatttcaattttcctacactccatccaaatg |
15106524 |
T |
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